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At least 847 records · Page 47Linked to original sources

Response to the Point of View of Gregory B. Pauly, David M. Hillis, and David C. Cannatella, by the Anuran Subcommittee of the SSAR/HL/ASIH Scientific and Standard English Names List

The Point of View by Gregory Pauly, David Hillis, and David Cannatella misrepresents the motives and activities of the anuran subcommittee of the Scientific and Standard English Names Committee, contains a number of misleading statements, omits evidence and references to critical literature that have already rejected or superseded their positions, and cloaks the limitations of their nomenclatural approach in ambiguous language. Their Point of View is not about promoting transparency in the process of constructing the English Names list, assuring that its taxonomy is adequately reviewed, or promoting nomenclatural stability in any global sense. Rather, their Point of View focuses in large part on a single publication, The Amphibian Tree of Life , which is formally unrelated to the Standard English Names List , and promotes an approach to nomenclature mistakenly asserted by them to be compatible with both the International Code of Zoological Nomenclature and one of its competitors, the PhyloCode .

Herpetologica↗

Observed changes in phenology across the USA: A regional review for the 2013 National Climate Assessment, Alaska and the Arctic Regional Information Sheet

This is one in a series of eight, geographic region-focused information sheets that summarizes documented changes in plant and animal phenology over the past century across the United States. This summary is based on long-term studies (10 years or more) published in the primary scientific literature since 2001. A forthcoming manuscript synthesizes the findings of the eight regional information sheets. This information was developed in support of the U.S. Global Change Research Program’s National Climate Assessment and can be used to facilitate preparation for the cascading effects of ongoing climate change.

Alaska↗

Observed changes in phenology across the USA: A regional review for the 2013 National Climate Assessment, Hawaii and Pacific Islands Regional Information Sheet

This is one in a series of eight, geographic region-focused information sheets that summarizes documented changes in plant and animal phenology over the past century across the United States. This summary is based on long-term studies (10 years or more) published in the primary scientific literature since 2001. A forthcoming manuscript synthesizes the findings of the eight regional information sheets. This information was developed in support of the U.S. Global Change Research Program’s National Climate Assessment and can be used to facilitate preparation for the cascading effects of ongoing climate change.

Hawai‘i↗

Poikilotherm vertebrate cell lines and viruses: A current listing for fishes

A survey of the literature and of work being done in vertebrate cell culture shows that there are currently in existence and available to investigators some 61 cell lines representing 17 families and 36 species of fish. The literature of fish virology shows that at least 17 fish viruses have been isolated and that at least 15 others have been visualized by electron microscopy. A minimum of four major virus groups—rhabdovirus, orthomyxovirus, iridovirus and herpesvirus—are known from fish. Original references, key reviews and sources of cell lines are given.

In Vitro↗

Ecological risks of shale oil and gas development to wildlife, aquatic resources and their habitats

Technological advances in hydraulic fracturing and horizontal drilling have led to the exploration and exploitation of shale oil and gas both nationally and internationally. Extensive development of shale resources has occurred within the United States over the past decade, yet full build out is not expected to occur for years. Moreover, countries across the globe have large shale resources and are beginning to explore extraction of these resources. Extraction of shale resources is a multistep process that includes site identification, well pad and infrastructure development, well drilling, high-volume hydraulic fracturing and production; each with its own propensity to affect associated ecosystems. Some potential effects, for example from well pad, road and pipeline development, will likely be similar to other anthropogenic activities like conventional gas drilling, land clearing, exurban and agricultural development and surface mining (e.g., habitat fragmentation and sedimentation). Therefore, we can use the large body of literature available on the ecological effects of these activities to estimate potential effects from shale development on nearby ecosystems. However, other effects, such as accidental release of wastewaters, are novel to the shale gas extraction process making it harder to predict potential outcomes. Here, we review current knowledge of the effects of high-volume hydraulic fracturing coupled with horizontal drilling on terrestrial and aquatic ecosystems in the contiguous United States, an area that includes 20 shale plays many of which have experienced extensive development over the past decade. We conclude that species and habitats most at risk are ones where there is an extensive overlap between a species range or habitat type and one of the shale plays (leading to high vulnerability) coupled with intrinsic characteristics such as limited range, small population size, specialized habitat requirements, and high sensitivity to disturbance. Examples include core forest habitat and forest specialists, sagebrush habitat and specialists, vernal pond inhabitants and stream biota. We suggest five general areas of research and monitoring that could aid in development of effective guidelines and policies to minimize negative impacts and protect vulnerable species and ecosystems: (1) spatial analyses, (2) species-based modeling, (3) vulnerability assessments, (4) ecoregional assessments, and (5) threshold and toxicity evaluations.

Environmental Science & Technology↗

A review of recently active faults in Taiwan

Six faults associated with five large earthquakes produced surface displacements ranging from 1 to 3 m in the period 1906 through 1951. Four of the ruptures occurred in the western coastal plain and foothills, and two occurred in the Longitudinal Valley of eastern Taiwan. Maps are included showing the locations and dimensions of the displacements. The published geological literature probably would not lead one to infer the existence of a fault along most of the 1906 rupture, except for descriptions of the rupture itself. Over most of its length the 1935 rupture on the Chihhu fault is parallel to but more than 0.5 km from nearby faults shown on geologic maps published in 1969 and 1971; only about 1.5 km of its 15 km length coincides with a mapped fault. The coastal plain part of the Tuntzuchio fault which ruptured in 1935 is apparently not revealed by landforms, and only suggested by other data. Part of the 1946 Hsinhua faulting coincides with a fault identified in the subsurface by seismic work but surface indications of the fault are obscure. The 1951 Meilun faulting occurred along a conspicuous pre-1951 scarp and the 1951 Yuli faulting occurred near or in line with pre-1951 scarps. More than 40 faults which, according to the published literature, have had Pleistocene or later movement are shown on a small-scale map. Most of these faults are in the densely-populated western part of Taiwan. The map and text calls attention to faults that may be active and therefore may be significant in planning important structures. Equivocal evidence suggestive of fault creep was found on the Yuli fault and the Hsinhua fault. Fault creep was not found at several places examined along the 1906 fault trace. Tectonic uplift has occurred in Taiwan in the last 10,000 years and application of eustatic sea level curves to published radiocarbon dates shows that the minimum rate of uplift is considerably different in different parts of the island. Incomplete data indicate that the rate is high near Hualien, where an uplift of at least 0.6 m and probably more than 1 m occurred in the 1951 earthquake, and near and south of the 1946 faulting. Sudden uplifts can have serious consequences for installations near the shore. Investigation of this process, study of recently active faults, and continuing study of seismicity are necessary parts of a practical earthquake-hazard reduction program.

Open-File Report↗

Data Model and Relational Database Design for Highway Runoff Water-Quality Metadata

A National highway and urban runoff waterquality metadatabase was developed by the U.S. Geological Survey in cooperation with the Federal Highway Administration as part of the National Highway Runoff Water-Quality Data and Methodology Synthesis (NDAMS). The database was designed to catalog available literature and to document results of the synthesis in a format that would facilitate current and future research on highway and urban runoff. This report documents the design and implementation of the NDAMS relational database, which was designed to provide a catalog of available information and the results of an assessment of the available data. All the citations and the metadata collected during the review process are presented in a stratified metadatabase that contains citations for relevant publications, abstracts (or previa), and reportreview metadata for a sample of selected reports that document results of runoff quality investigations. The database is referred to as a metadatabase because it contains information about available data sets rather than a record of the original data. The database contains the metadata needed to evaluate and characterize how valid, current, complete, comparable, and technically defensible published and available information may be when evaluated for application to the different dataquality objectives as defined by decision makers. This database is a relational database, in that all information is ultimately linked to a given citation in the catalog of available reports. The main database file contains 86 tables consisting of 29 data tables, 11 association tables, and 46 domain tables. The data tables all link to a particular citation, and each data table is focused on one aspect of the information collected in the literature search and the evaluation of available information. This database is implemented in the Microsoft (MS) Access database software because it is widely used within and outside of government and is familiar to many existing and potential customers. The stratified metadatabase design for the NDAMS program is presented in the MS Access file DBDESIGN.mdb and documented with a data dictionary in the NDAMS_DD.mdb file recorded on the CD-ROM. The data dictionary file includes complete documentation of the table names, table descriptions, and information about each of the 419 fields in the database.

Open-File Report↗

A systematic review of the effects of climate variability and change on black and brown bear ecology and interactions with humans

Climate change poses a pervasive threat to humans and wildlife by altering resource availability, changing co-occurrences, and directly or indirectly influencing human-wildlife interactions. For many wildlife agencies in North America, managing bears ( Ursus spp.) and human-bear interactions is a priority, yet the direct and indirect effects of climate change are exacerbating management challenges. Understanding the underlying ecological drivers of bear responses to climate variability and change, and the implications for conflict, will be critical for maintaining human-bear coexistence in North America. We synthesized 120 articles that identified direct and indirect mechanisms by which climate variability and change affect brown bears ( Ursus arctos ) and American black bears ( Ursus americanus ) in North America. The literature focused on examining climate impacts on bear diet, body size, habitat selection, space use, activity, denning chronology, and population demographics and dynamics. Across these categories, we summarized the documented and projected bear responses and resulting implications for human-bear interactions. Climate-driven changes in natural food availability were frequently implicated in influencing bear behavior and demography, and creating conditions under which interactions with humans are likely to increase. Bears in North America may face increased challenges as habitat and natural food availability continue to be altered by climate change. Our review provides a foundation upon which to identify climate drivers of bear ecology, conditions conducive to human-bear interactions, and adaptive management strategies. Given substantial evidence of climate impacts to bears, incorporating climate considerations into bear management can help managers strategically allocate resources and promote human-bear coexistence.

Biological Conservation↗

Silver nanoparticles: Behaviour and effects in the aquatic environment

This review summarises and evaluates the present knowledge on the behaviour, the biological effects and the routes of uptake of silver nanoparticles (Ag NPs) to organisms, with considerations on the nanoparticle physicochemistry in the ecotoxicity testing systems used. Different types of Ag NP syntheses, characterisation techniques and predicted current and future concentrations in the environment are also outlined. Rapid progress in this area has been made over the last few years, but there is still a critical lack of understanding of the need for characterisation and synthesis in environmental and ecotoxicological studies. Concentration and form of nanomaterials in the environment are difficult to quantify and methodological progress is needed, although sophisticated exposure models show that predicted environmental concentrations (PECs) for Ag NPs in different environmental compartments are at the range of ng L − 1 to mg kg − 1 . The ecotoxicological literature shows that concentrations of Ag NPs below the current and future PECs, as low as just a few ng L − 1 , can affect prokaryotes, invertebrates and fish indicating a significant potential, though poorly characterised, risk to the environment. Mechanisms of toxicity are still poorly understood although it seems clear that in some cases nanoscale specific properties may cause biouptake and toxicity over and above that caused by the dissolved Ag ion. This review concludes with a set of recommendations for the advancement of understanding of the role of nanoscale silver in environmental and ecotoxicological research.

Environment International↗

Synthesis of observed field salinity ranges for oyster and seagrass species in the U.S.

Oyster and seagrass are important sessile, habitat-forming species that may be impacted by changes in salinity regimes from anthropogenic or climatic drivers. While salinity tolerance literature is focused on controlled experiments, observed field salinity ranges of species are more disparate. The salinity ranges in which organisms are observed in the field may not align exactly with their experimentally (wet lab) determined physiological salinity tolerances, since other critical factors control species occurrence. We performed a systematic review to synthesize observed practical salinity ranges for 10 oyster and 12 seagrass species in coastal waters of the United States. Of initially returned search results for oysters and seagrass, only 11.4% and 6.5% met our review inclusion criteria, respectively, corresponding to 3 oyster species and 5 seagrass species. The majority (95%) of the 57 reviewed studies were along the Atlantic and Gulf coasts, with 68% focusing on Crassostrea virginica . Shorter studies following episodic events were more common than long-term monitoring. Observed field salinity ranges were as follows (ppt): Crassostrea virginica (0.1 – 42.8, mean: 19.6), Ostrea lurida (1.7 – 32.5, mean: 27.8), Thalassia testudinum (0 – 65, mean 31.8), Halodule wrightii (<0.5 – 68.7, mean: 18.5), Syringodium filiforme (13.7 – 68.7, mean: 30.4), Ruppia maritima (0 – 29.4, mean: 3.8), and Zostera marina (19.7 – 51.2, mean: 28.9). Place-based examples highlight how reported overlapping salinity ranges for oyster and seagrass species can be used to expand existing habitat suitability models, inform restoration, and provide considerations for guiding holistic management of freshwater inflows to estuaries.

Estuaries and Coasts↗

Siberian platform: Geology and natural bitumen resources

The Siberian platform is located between the Yenisey River on the west and the Lena River on the south and east. The Siberian platform is vast in size and inhospitable in its climate. This report is concerned principally with the setting, formation, and potential volumes of natural bitumen. In this report the volumes of maltha and asphalt referred to in the Russian literature are combined to represent natural bitumen. The generation of hydrocarbons and formation of hydrocarbon accumulations are discussed. The sedimentary basins of the Platform are described in terms of the Klemme basin classification system and the conditions controlling formation of natural bitumen. Estimates of in-place bitumen resources are reviewed and evaluated. If the bitumen volume estimate is confined to parts of identified deposits where field observations have verified rock and bitumen grades values, the bitumen resource amounts to about 62 billion barrels of oil in-place. However, estimates of an order of magnitude larger can be obtained if additional speculative and unverified rock volumes and grade measures are included.

Open-File Report↗

Streamflow measurement network review for hydroelectric power applications in Brazil

This review of selected segments of the stream-gaging network of Brazil was undertaken by the writer in March and April, 1973, pursuant to an agreement between Companhia de Pesquisa de Recursos Minerais (CPRM) and Centrais Eletricas Brasileiras S.A. (ELETROBRAS) as a part of the cooperative program of the U.S. Geological Survey (USGS) and CPRM under the auspices of the Ministerio das Minas e Energia (MME) and the U.S. Agency for International Development (USAID). Its primary purpose is to provide an evaluation of the adequacy of streamflow data on streams which are being considered for or are already being utilized for hydroelectric power sources. Some comments are included pertaining to the general coverage hydrologic network. These comments were generated by the examination of the streamflow data useful for power purposes because all gaging stations form a part of the total network for hydrologic investigations. Present plans are that the entire network will eventually be operated by or under the jurisdiction of the MME through the Departamento National de Aguas e Energia Eletrica (DNAEE). Brazil is a large country, larger than the conterminous United States, and it has been engaged in hydrologic investigations for more than 50 years. The network has been maintained by Federal agencies, State agencies, power companies, and consulting firms and until recently no organizational mechanism existed to coordinate the various activities or to establish uniform standards of data collection, computation, and publication. It is estimated that stage and/or discharge data have been collected at 2,500 or more sites in Brazil. Because there has been no centralized publication system, it has not been possible to locate with assurance all measurement sites or to ascertain precisely the types and quality of the data collected or available. For these reasons the suggestions outlined in this report are expected to be modified on the basis of local need and site information, which may not have been evident at the time of the review. For example, specific suggestions have been made to discontinue some stations which appear superfluous or which essentially duplicate other stations. In other instances additions to the network have been proposed. There may be reasons for the continued operation of a given station which cannot be discerned from the available literature. Also coverage may have been established in an area but the evidence has not yet appeared in print. DEAEE is currently (1973) working diligently to overcome a backlog of data computation and publication. Brazil is currently developing at a rapid rate with electric power demands increasing at a 12% annually, a reflection of the tremendous growth of the economy. With this rate of increase likely to continue for the foreseable future, it goes without saying that hydrologic information needed tomorrow must be collected today.

Open-File Report↗

The confluences of ideas leading to, and the flow of ideas emerging from, individual-based modeling of riverine fishes

In this review article, we trace the history of events leading to the development of individual-based models (IBMs) to represent aquatic organisms in rivers and streams. As a metaphor, we present this history as a series of confluences between individual scientists (tributaries) sharing ideas. We describe contributions of these models to science and management. One iconic feature of river IBMs is the linkage between flow and the physical habitat experienced by individual animals, and the first model that focused on this linkage is briefly described. We continue by reviewing the contributions of riverine IBMs to eight broad areas of scientific inquiry. The first four areas include research to understand 1) the effects of flow regimes on fish populations, 2) species interactions (e.g., size-mediated competition and predation), 3) fish movement and habitat selection, and 4) contaminant and water quality impacts on populations. Next, we review research using IBMs 5) to guide conservation biology of imperiled taxa through population viability analysis, including research 6) to understand river fragmentation by dams and reconnection, 7) to understand genetic outcomes for riverine metapopulations, and 8) to anticipate the future effects of temperature and climate change. This rich body of literature has contributed to both theoretical insights (e.g., about animal behavior and life history) and applied insights (e.g., population-level effects of flow regimes, temperature, and the effects of hydropower and other industries that share rivers with aquatic biota). We finish by exploring promising branches that lie ahead in the braided, downstream channel that represents future river modeling research.

Ecological Modelling↗

Causes, responses, and implications of anthropogenic versus natural flow intermittence in river networks

Rivers that do not flow year-round are the predominant type of running waters on Earth. Despite a burgeoning literature on natural flow intermittence (NFI), knowledge about the hydrological causes and ecological effects of human-induced, anthropogenic flow intermittence (AFI) remains limited. NFI and AFI could generate contrasting hydrological and biological responses in rivers because of distinct underlying causes of drying and evolutionary adaptations of their biota. We first review the causes of AFI and show how different anthropogenic drivers alter the timing, frequency and duration of drying, compared with NFI. Second, we evaluate the possible differences in biodiversity responses, ecological functions, and ecosystem services between NFI and AFI. Last, we outline knowledge gaps and management needs related to AFI. Because of the distinct hydrologic characteristics and ecological impacts of AFI, ignoring the distinction between NFI and AFI could undermine management of intermittent rivers and ephemeral streams and exacerbate risks to the ecosystems and societies downstream.

BioScience↗

New approaches to the analysis of population trends in land birds: Comment

James et al. (1996, Ecology 77:13-27) used data from the North American Breeding Bird Survey (BBS) to examine geographic variability in patterns of population change for 26 species of wood warblers. They emphasized the importance of evaluating nonlinear patterns of change in bird populations, proposed LOESS-based non-parametric and semi-parametric analyses of BBS data, and contrasted their results with other analyses, including those of Robbins et al. (1989, Proceedings of the National Academy of Sciences 86: 7658-7662) and Peterjohn et al. (1995, Pages 3-39 in T. E. Martin and D. M. Finch, eds. Ecology and management of Neotropical migratory birds: a synthesis and review of critical issues. Oxford University Press, New York.). In this note, we briefly comment on some of the issues that arose from their analysis of BBS data, suggest a few aspects of the survey that should inspire caution in analysts, and review the differences between the LOESS-based procedures and other procedures (e.g., Link and Sauer 1994). We strongly discourage the use of James et al.'s completely non-parametric procedure, which fails to account for observer effects. Our comparisons of estimators adds to the evidence already present in the literature of the bias associated with omitting observer information in analyses of BBS data. Bias resulting from change in observer abilities should be a consideration in any analysis of BBS data.

Ecology↗

Tidal saline wetland regeneration of sentinel vegetation types in the Northern Gulf of Mexico: An overview

Tidal saline wetlands in the Northern Gulf of Mexico (NGoM) are dynamic and frequently disturbed systems that provide myriad ecosystem services. For these services to be sustained, dominant macrophytes must continuously recolonize and establish after disturbance. Macrophytes accomplish this regeneration through combinations of vegetative propagation and sexual reproduction, the relative importance of which varies by species. Concurrently, tidal saline wetland systems experience both anthropogenic and natural hydrologic alterations, such as levee construction, sea-level rise, storm impacts, and restoration activities. These hydrologic alterations can affect the success of plant regeneration, leading to large-scale, variable changes in ecosystem structure and function. This review describes the specific regeneration requirements of four dominant coastal wetland macrophytes along the NGoM ( Spartina alterniflora , Avicennia germinans , Juncus roemerianus , and Batis maritima ) and compares them with current hydrologic alterations to provide insights into potential future changes in dominant ecosystem structure and function and to highlight knowledge gaps in the current literature that need to be addressed.

Gulf of Mexico↗

The effects of pollutants on wildlife

In this chapter, selected sources of information which address the effects of pollutants on wildlife are reviewed. Although naturally occurring plant and animal toxins also affect wildlife, the focus of this review is xenobiotic toxicants. Xenobiotic substances are chemicals introduced into the environment in the form of pesticides, heavy metals, polychlorinated biphenyls (PCBs), and other by-products of human activities. The science of examining the effects of these substances on animal and plant life is multi-disciplinary in nature and contributors to the literature in this field include toxicologists, wildlife and aquatic ecologists, chemists and those in the veterinary and medical professions.

Book chapter↗

Characterization of the water resources of the Pamunkey River watershed in Virginia—A review of water science, management, and traditional ecological knowledge

In central Virginia, the Pamunkey Indian Tribe and Reservation are facing increasingly complex water resource issues related to quantity and quality. Documentation of surface-water, groundwater, water quality, land subsidence, sea-level rise, and river ecology issues in the Pamunkey River watershed and incorporation of traditional ecological knowledge into these research topics may improve understanding of the water resources broadly. This report summarizes the relevant traditional ecological knowledge and scientific literature to elucidate gaps in the total combined knowledge of a suite of water science topics concerning the Pamunkey River watershed. This suite of water science topics includes some of the issues that the Pamunkey Indian Tribe and Reservation are facing within the watershed: fragmentation of streams and management of streamflow, flooding, degrading water quality, groundwater extraction, relative sea-level rise, rapid changes in ecosystems, loss of ecological and biological diversity, and climate change. Gaps in total combined knowledge are pervasive throughout each of these water resource topics. Identifying these knowledge gaps can help inform future research and management strategies.

Virginia↗