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Role of environmental variability in evaluating stressor effects

In this chapter, we discuss how environmental variability affects the exposure of organisms and ecological systems to stressors, and give guidance on how to understand influences of stressors. We consider the characteristics of environmental variability and issues relating to the measurement of environmental variation. We discuss how to select the optimal indicators of ecological response in a variable natural environment. Finally, we suggest some approaches to incorporate environmental variability into resource management. In all cases we employ examples and case studies throughout to illustrate principles.

Book chapter↗

State of the science and decision support for measuring suspended sediment with acoustic instrumentation

Acoustic instrumentation can be used to provide time-series and discrete estimates of suspended-sediment concentration, load, and sediment particle sizes in fluvial systems, which are essential for creating informed solutions to many sediment-related environmental, engineering, and land management concerns. Historically, scientists have developed relations between suspended sediment characteristics and other parameters, most commonly streamflow, to estimate sediment information when physical sediment samples cannot be collected. Approaches using streamflow can have substantial accuracy limitations because of hysteresis effects, giving rise to the use of more direct surrogate approaches such as acoustic methods. Interagency efforts in recent years have advanced the testing, methods development, operational guidelines, and training on acoustic methods for measuring suspended sediment. Scientists interested in using these methods are faced with many decisions on the type of application and deployment: horizontal profiling, vertical profiling, or point acoustic instruments; single or multifrequency instruments; continuous or discrete sediment measurements; and fixed or mobile instrument deployments. To promote cost-effective, accurate, and high-resolution fluvial sediment data for the Nation, the interagency Sediment Acoustic Leadership Team (SALT) develops technical guidance and training for using acoustic instruments to measure aquatic sediment. Even though acoustic instrumentation has been used successfully to measure suspended-sediment characteristics throughout the world, some deployments have been unsuccessful because of limited technical guidance and selection of an inappropriate method. To guide decisions on method selection, the SALT has compiled the state of the science for the main types of acoustics-based suspended-sediment measurement methods in development, testing, and use, and has created a flowchart to guide method selection.

Conference Paper↗

Future aquatic invaders of the Northeast U.S.: How climate change, human vectors, and natural history could bring southern and western species north

As environmental conditions change, land managers are increasingly concerned about the potential for new aquatic invasive species to move into their jurisdictions. Because managers may have limited resources, detecting invasive species early is important as prevention is more effective and less costly than ongoing mitigation of established populations. Tools built to assist early detection efforts often use information on pathways of spread (how species move through a landscape) and maps of suitability (where habitat allows a species to live and reproduce). While each is useful, information on pathways or suitability alone provides only a part of the story of invasion risk. To better anticipate the risk of invasive species expanding their ranges into the Northeast U.S., there is a need to improve the way we combine and use pathways and suitability information, especially across large areas (e.g., states, regions). To fill this need, we took a new approach that combines estimates of current and future suitability with a diverse variety of pathways that gives us invasion risk scores for more than 100 freshwater invaders (fishes, plants, and invertebrates) across the Northeast U.S. In this report, we provide an overview of our methodology, results, and a description of the ongoing work to make the data publicly available. This work can be used to aid early detection efforts and associated management activities at state and local levels, including the identification of invasion risk hotspots and ranking of individual species risk to help anticipate and prevent invader establishment.

northeast United States↗

Linking environmental variability to long-term demographic change of an endangered species using integrated population models

Understanding how species populations change with environmental conditions is important for implementing effective habitat management and conservation strategies. Challenges to evaluating population-level responses to environmental conditions arise when data are sparse or not spatiotemporally aligned, especially for at-risk species with small, declining numbers. We synthesized 30 years (1992–2021) of three partially aligned data sets to build a Bayesian integrated population model (IPM) and evaluate demographic and environmental drivers of growth rates for six separately managed ‘subpopulations’ (A–F) of the federally endangered Cape Sable seaside sparrow endemic to the Florida Everglades. We found that juvenile survival peaked at inundation periods (hydroperiods) around 100–220 days and dropped sharply outside those values, while adult survival increased with longer periods of water depth <20 cm, but not with longer periods of water depth >20 cm. Fecundity increased when water depths were more stable, more area was dry, intervals between fires were longer and less area was burned. Changes in population growth rates tended to occur in years that juvenile and adult survival were associated with hydroperiod, especially in the two largest subpopulations B and E. Population growth rates were also associated with hydrologic conditions during the breeding season and fire dynamics through changes in fecundity, most notably in the smaller subpopulations A, C/F and D. Synthesis and applications . Our IPM represents the first long-term population analysis of the Cape Sable seaside sparrow connecting demographic processes to environmental factors. Our results suggest that sustaining periods of shallow water year-round may enhance Cape Sable seaside sparrow survival and population growth. Also, limiting water depth variability and maintaining dry conditions during the breeding season and inhibiting fires in consecutive years may increase fecundity and population growth. Identifying the mechanistic links between environmental and population dynamics could inform how species are expected to respond to management decisions and anticipated ecosystem changes.

Florida↗

Distribution of lake sturgeon in New York: 11 years of restoration management

Lake sturgeon ( Acipenser fulvescens ) are native within the Lake Ontario drainage basin and listed as threatened by New York State. In 1995 the New York State Department of Environmental Conservation (NYSDEC) initiated restoration management of lake sturgeon. This management included both protection of extant populations and stocking of uninhabited historic waters with juvenile sturgeon. A list compiled by NYSDEC of observations of lake sturgeon from New York State waters for the period encompassing 1800–2005 was combined with recent observations through 2008 and formatted (Geographic Information System) to allow mapping of sturgeon geographical distribution. Distributions of pre- and post-restoration sturgeon were examined by occurrence and type of observation. Distribution patterns indicated lakes and rivers with current sturgeon presence have increased from five to eight, which was the first-phase goal of the New York Lake Sturgeon Recovery Plan. Lake sturgeon have started to expand into joining water to include the Indian R., Oneida R., Seneca R. and Oswego R. The protected historic populations in the Niagara R., Grasse R., St. Lawrence R., and Lakes Erie and Ontario continue to have low numbers of sturgeon observations. This summary of mapped lake sturgeon distribution information will help in guiding research assessments to waters containing substantial populations. These accessible reaches provide a generous advantage to the released juveniles as they move toward the next goal of restoration, spawning of sturgeon in targeted waters.

New York↗

Scale dependence of coral reef oases and their environmental correlates

Identifying relatively intact areas within ecosystems and determining the conditions favoring their existence is necessary for effective management in the context of widespread environmental degradation. In this study, we used 3766 surveys of randomly selected sites in the United States and U.S. Territories to identify the correlates of sites categorized as “oases” (defined as sites with relatively high total coral cover). We used occupancy models to evaluate the influence of 10 environmental predictors on the probability that an area (21.2-km 2 cell) would harbor coral oases defined at four spatial extents: cross-basin, basin, region, and subregion. Across all four spatial extents, oases were more likely to occur in habitats with high light attenuation. The influence of the other environmental predictors on the probability of oasis occurrence were less consistent and varied with the scale of observation. Oases were most likely in areas of low human population density, but this effect was evident only at the cross-basin and subregional extents. At the regional and subregional extents oases were more likely where sea-surface temperature was more variable, whereas at the larger spatial extents the opposite was true. By identifying the correlates of oasis occurrence, the model can inform the prioritization of reef areas for management. Areas with biophysical conditions that confer corals with physiological resilience, as well as limited human impacts, likely support coral reef oases across spatial extents. Our approach is widely applicable to the development of conservation strategies to protect biodiversity and ecosystems in an era of magnified human disturbance.

Ecological Applications↗

Estimating linear temporal trends from aggregated environmental monitoring data

Trend estimates are often used as part of environmental monitoring programs. These trends inform managers (e.g., are desired species increasing or undesired species decreasing?). Data collected from environmental monitoring programs is often aggregated (i.e., averaged), which confounds sampling and process variation. State-space models allow sampling variation and process variations to be separated. We used simulated time-series to compare linear trend estimations from three state-space models, a simple linear regression model, and an auto-regressive model. We also compared the performance of these five models to estimate trends from a long term monitoring program. We specifically estimated trends for two species of fish and four species of aquatic vegetation from the Upper Mississippi River system. We found that the simple linear regression had the best performance of all the given models because it was best able to recover parameters and had consistent numerical convergence. Conversely, the simple linear regression did the worst job estimating populations in a given year. The state-space models did not estimate trends well, but estimated population sizes best when the models converged. We found that a simple linear regression performed better than more complex autoregression and state-space models when used to analyze aggregated environmental monitoring data.

Ecological Indicators↗

Adaptive monitoring in support of adaptive management in rangelands

Monitoring supports iterative learning about the effectiveness of management actions, information that can help managers plan future actions, facilitate decision-making, and improve outcomes. Adaptive monitoring is the evolution of a monitoring program in response to new management questions; new or changing environmental or socioeconomic conditions, improved monitoring methods, models, and tools; and experience implementing the monitoring program. Adaptive monitoring is connected to research and management through the exchange of data; analytical, methodological, and technological developments; information; and understanding. We review recent advances in adaptive monitoring and discuss new opportunities for both the research and management communities to improve monitoring in the years ahead.

Rangelands↗

Integration of environmental simulation models with satellite remote sensing and geographic information systems technologies: case studies

Environmental modelers are testing and evaluating a prototype land cover characteristics database for the conterminous United States developed by the EROS Data Center of the U.S. Geological Survey and the University of Nebraska Center for Advanced Land Management Information Technologies. This database was developed from multi temporal, 1-kilometer advanced very high resolution radiometer (AVHRR) data for 1990 and various ancillary data sets such as elevation, ecological regions, and selected climatic normals. Several case studies using this database were analyzed to illustrate the integration of satellite remote sensing and geographic information systems technologies with land-atmosphere interactions models at a variety of spatial and temporal scales. The case studies are representative of contemporary environmental simulation modeling at local to regional levels in global change research, land and water resource management, and environmental simulation modeling at local to regional levels in global change research, land and water resource management and environmental risk assessment. The case studies feature land surface parameterizations for atmospheric mesoscale and global climate models; biogenic-hydrocarbons emissions models; distributed parameter watershed and other hydrological models; and various ecological models such as ecosystem, dynamics, biogeochemical cycles, ecotone variability, and equilibrium vegetation models. The case studies demonstrate the important of multi temporal AVHRR data to develop to develop and maintain a flexible, near-realtime land cover characteristics database. Moreover, such a flexible database is needed to derive various vegetation classification schemes, to aggregate data for nested models, to develop remote sensing algorithms, and to provide data on dynamic landscape characteristics. The case studies illustrate how such a database supports research on spatial heterogeneity, land use, sensitivity analysis, and scaling issues involving regional extrapolations and parameterizations of dynamic land processes within simulation models.

Pecora 12 Symposium↗

Long-term monitoring identifies increase in Henslow’s Sparrow (Centronyx henslowii) abundance following fire management in a North Carolina grassland

Understanding population responses to environmental change is critical for assessing vulnerability, resilience, and habitat management needs. We assessed Henslow’s Sparrow ( Centronyx henslowii ) abundance and breeding productivity in an isolated North Carolina grassland (1149 ha) that transitioned from unmanaged to fire-managed during 2011–2024. Fire management was initiated in 2016, where approximately 1/3 of the grassland is burned annually in late summer on a rotating basis, resulting in a full burn cycle of roughly three years. We used hierarchical distance sampling models to estimate the change in Henslow’s Sparrow abundance before and after fire management from point count data (45–50 locations surveyed annually). Estimated average abundances (i.e., expected number of singing male sparrows per site) significantly increased from 1.387 individuals per survey location pre-management (95% credible interval [CI]: 0.822–2.267) to 3.124 post-management (CI: 2.235–4.385), resulting in annual population sizes ranging from 56 singing male sparrows in 2012 (CI: 36–85), to 411 in 2022 (CI: 342–498). From 2022 to 2023, average brood size was 3.148 (95% confidence interval [CI]: 2.637–3.659) and survival probability for a 24-day nesting cycle was 0.693 (CI: 0.369–0.897). Apparent nesting success was 70–89%, much higher than reported in previous studies (19–62%). Increased abundance post-management indicates that Henslow’s Sparrows are responding positively to the use of prescribed fire, while the estimated rates of breeding productivity indicate the species likely has the capacity to sustain the local population. This study provides baseline information for managers to monitor population status, while laying the foundation to identify regulatory mechanisms and gauge the effectiveness of the current fire management strategy in maintaining an isolated population of Henslow’s Sparrows.

North Carolina↗

Effects of flow dynamics on the aquatic-terrestrial transition zone (ATTZ) of lower Missouri river sandbars with implications for selected biota

Sandbars are an important aquatic terrestrial transition zone (ATTZ) in the active channel of rivers that provide a variety of habitat conditions for riverine biota. Channelization and flow regulation in many large rivers have diminished sandbar habitats and their rehabilitation is a priority. We developed sandbar-specific models of discharge-area relationships to determine how changes in flow regime affect the area of different habitat types within the submerged sandbar ATTZ (depth) and exposed sandbar ATTZ (elevation) for a representative sample of Lower Missouri River sandbars. We defined six different structural habitat types within the sandbar ATTZ based on depth or exposed elevation ranges that are important to different biota during at least part of their annual cycle for either survival or reproduction. Scenarios included the modelled natural flow regime, current managed flow regime and two environmental flow options, all modelled within the contemporary river active channel. Thirteen point and wing-dike sandbars were evaluated under four different flow scenarios to explore the effects of flow regime on seasonal habitat availability for foraging of migratory shorebirds and wading birds, nesting of softshell turtles and nursery of riverine fishes. Managed flows provided more foraging habitat for shorebirds and wading birds and more nursery habitat for riverine fishes within the channelized reach sandbar ATTZ than the natural flow regime or modelled environmental flows. Reduced summer flows occurring under natural and environmental flow alternatives increased exposed sandbar nesting habitat for softshell turtle hatchling emergence. Results reveal how management of channelized and flow regulated large rivers could benefit from a modelling framework that couples hydrologic and geomorphic characteristics to predict habitat conditions for a variety of biota.

River Research and Applications↗

National Park Service Vegetation Mapping Inventory Program: Jean Lafitte National Historical Park and Preserve Vegetation Mapping Project

The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. The series supports the advancement of science, informed decision-making, and the achievement of the National Park Service mission. The series also provides a forum for presenting lengthier results that may not be accepted by publications with page limitations. All manuscripts in the series receive the appropriate level of peer review to ensure that the information is scientifically credible, technically accurate, appropriately written for the intended audience, and designed and published in a professional manner. This report received formal peer review by subject-matter experts whose background and expertise put them on par technically and scientifically with the authors of the information. The peer review was led according to the Fundamental Science Practices of the U.S. Geological Survey. Views, statements, findings, conclusions, recommendations, and data in this report do not necessarily reflect views and policies of the National Park Service, U.S. Department of the Interior. Mention of trade names or commercial products does not constitute endorsement or recommendation for use by the U.S. Government. This report is available in digital format from the Gulf Coast Network website and the Natural Resource Publications Management website.

Louisiana↗

The value of reducing uncertainties to support the management of a high‐elevation endemic salamander

Many salamander populations are declining, and methods to determine how best to allocate limited resources to slow or reverse these declines could support land managers in their decision‐making processes. Multiple types of uncertainty may delay management decisions, including when (1) knowledge of a species' ecology is incomplete, (2) climate change effects on environmental covariates are uncertain, and (3) the efficacy of management alternatives is unknown. For management decisions, a value‐of‐information analysis can identify which uncertainties are critical to reduce in order to identify an optimal strategy from a set of possible management actions. If the same management action is optimal across the full range of uncertainties, then resources for research can be redirected toward active management. Using value‐of‐information analyses, we examine the effect of uncertainty on identifying optimal management to maximize the future expected occupancy of Plethodon shenandoah , a Federally Endangered high‐elevation endemic salamander that is threatened by climate change. Out of 11 management actions proposed by National Park Service managers, those that increase environmental moisture are expected to maximize occupancy, and we find that the selection of this action is robust to all the identified uncertainties. We show that, even in systems with multiple sources of large uncertainty, value of information analyses discriminate among investments in species management.

Ecosphere↗

The abandoned mine inventory of the United States—A brief summary

The Infrastructure Investment and Jobs Act of 2021 required the Secretary of the Interior to establish a program to inventory abandoned hard-rock mines in the United States. The Department of the Interior’s Office of Environmental Policy and Compliance asked the U.S. Geological Survey’s Mineral Deposit Database project (USMIN) to use existing data sources to build an inventory of all individual abandoned mine features in the United States. In addition to feature locations, this new database documents the surface land management agency, associated physical and environmental hazards, and any completed mitigation efforts. This information will improve risk assessment and support land management efforts, including hazard mitigation, ecosystem restoration planning, and reclamation. This fact sheet provides a brief overview of USMIN’s collaborative efforts with Federal, State, and Tribal agencies to build a comprehensive and authoritative national inventory of abandoned mine features.

Fact Sheet↗

Using a full annual cycle model to evaluate long-term population viability of the conservation-reliant Kirtland's warbler after successful recovery

Long-term management planning for conservation-reliant migratory songbirds is particularly challenging because habitat quality in different stages and geographic locations of the annual cycle can have direct and carry-over effects that influence the population dynamics. The Neotropical migratory songbird Kirtland's warbler Setophaga kirtlandii (Baird 1852) is listed as endangered under the U.S. Endangered Species Act and Near Threatened under the IUCN Red List. This conservation-reliant species is being considered for U.S. federal delisting because the species has surpassed the designated 1000 breeding pairs recovery threshold since 2001. To help inform the delisting decision and long-term management efforts, we developed a population simulation model for the Kirtland's warbler that incorporated both breeding and wintering grounds habitat dynamics, and projected population viability based on current environmental conditions and potential future management scenarios. Future management scenarios included the continuation of current management conditions, reduced productivity and carrying capacity due to the changes in habitat suitability from the creation of experimental jack pine Pinus banksiana (Lamb.) plantations, and reduced productivity from alteration of the brown-headed cowbird Molothrus ater (Boddaert 1783) removal programme. Linking wintering grounds precipitation to productivity improved the accuracy of the model for replicating past observed population dynamics. Our future simulations indicate that the Kirtland's warbler population is stable under two potential future management scenarios: (i) continuation of current management practices and (ii) spatially restricting cowbird removal to the core breeding area, assuming that cowbirds reduce productivity in the remaining patches by ≤41%. The additional future management scenarios we assessed resulted in population declines. Synthesis and applications . Our study indicates that the Kirtland's warbler population is stable under current management conditions and that the jack pine plantation and cowbird removal programmes continue to be necessary for the long-term persistence of the species. This study represents one of the first attempts to incorporate full annual cycle dynamics into a population viability analysis for a migratory bird, and our results indicate that incorporating wintering grounds dynamics improved the model performance.

Michigan↗

Broad-scale assessments of ecological landscapes: developing methods and applications

The U.S. Department of the Interior (DOI) Bureau of Land Management (BLM) is developing a Landscape Approach for managing multiple uses of public lands by incorporating multiscale information to quantify the effects of natural and human influences on natural resource conditions and trends. A primary goal of the approach is to identify opportunities for resource conservation, restoration, and development. The BLM Landscape Approach is developing assessment methods that promote consistency in management decisions, identify ecological characteristics that promote ecosystem resilience under rapidly changing environmental conditions, and foster collaboration among land management agencies. The BLM Landscape Approach is closely aligned with the DOI&rsquo;s &ldquo;A Strategy for Improving the Mitigation Policies and Practices of The Department of the Interior.&rdquo; A major component of the BLM Landscape Approach is the Rapid Ecoregional Assessment (REA) program. REAs identify important ecosystems and wildlife habitats at broad spatial scales and determine where these resources are at risk from environmental stressors that can affect the integrity of ecological systems. Building on the lessons learned from completed or current REAs, the BLM, in partnership with the U.S. Geological Survey, will perform systematic comparisons of REA methods to identify the most promising suite of landscape-level analysis tools. In addition, the BLM and USGS will develop practical applications that demonstrate how to incorporate assessment information to address existing management issues, such as cumulative effects of proposed management actions. The outcome of these efforts will be a set of comprehensive technical guidance documents for conducting and applying broad-scale assessments.

Fact Sheet↗

Environmental fate model for ultra-low-volume insecticide applications used for adult mosquito management

One of the more effective ways of managing high densities of adult mosquitoes that vector human and animal pathogens is ultra-low-volume (ULV) aerosol applications of insecticides. The U.S. Environmental Protection Agency uses models that are not validated for ULV insecticide applications and exposure assumptions to perform their human and ecological risk assessments. Currently, there is no validated model that can accurately predict deposition of insecticides applied using ULV technology for adult mosquito management. In addition, little is known about the deposition and drift of small droplets like those used under conditions encountered during ULV applications. The objective of this study was to perform field studies to measure environmental concentrations of insecticides and to develop a validated model to predict the deposition of ULV insecticides. The final regression model was selected by minimizing the Bayesian Information Criterion and its prediction performance was evaluated using k -fold cross validation. Density of the formulation and the density and CMD interaction coefficients were the largest in the model. The results showed that as density of the formulation decreases, deposition increases. The interaction of density and CMD showed that higher density formulations and larger droplets resulted in greater deposition. These results are supported by the aerosol physics literature. A k -fold cross validation demonstrated that the mean square error of the selected regression model is not biased, and the mean square error and mean square prediction error indicated good predictive ability.

Science of the Total Environment↗