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Science needs of southeastern grassland species of conservation concern: A framework for species status assessments

The unglaciated southeastern United States is a biodiversity hotspot, with a disproportionate amount of this biodiversity concentrated in grasslands. Like most hotspots, the Southeast is also threatened by human activities, with the total reduction of southeastern grasslands estimated as 90 percent (upwards to 100 percent for some types) and with many threats escalating today. This report summarizes the results of a multistakeholder workshop organized by the Southeastern Grasslands Initiative and the U.S. Geological Survey, held in January 2020 to provide a scientific needs assessment to help inform the Species Status Assessment (SSA) process under the U.S. Endangered Species Act, with a focus on grassland species and communities of conservation concern in the southeastern United States. This report reviews the ecology of southeastern grasslands, including influences on their origin, maintenance, and high species richness and endemism; presents findings from the workshop; and discusses science questions, hypotheses, and possibilities for future research projects to help fill key knowledge gaps. Participants in the January 2020 workshop, representing diverse expertise in various topics in southeastern grassland ecology, were tasked with identifying major threats to grassland species in the Southeast as well as potential ways to make the SSA process more efficient and effective. An underlying assumption and starting place for workshop discussion was that an ecosystem-based approach to the SSA process is more cost-efficient than a species-by-species approach, in large part because many species with similar biological requirements can be addressed by the same actions. Nevertheless, one partner in this effort, the U.S. Fish and Wildlife Service, does require specific attention be given to taxa that have been petitioned for Federal listing, though as often as possible these taxa are considered alongside a larger group of priority taxa with an ecosystem approach. For group discussions, workshop participants followed a modified “World Café” method, a structured conversational approach for knowledge sharing. Group discussions focused on five categories of threats to grassland communities and species: (1) habitat loss, fragmentation, and disruption of functional population connectivity; (2) climate change, especially changes in temperature and precipitation, including intensity and seasonality, and impacts on soil moisture, groundwater levels, and other ecosystem parameters; (3) changes to disturbance regimes, as influenced by climate and land-use change, extinctions, and human attitudes and behaviors; (4) invasive species (not limited to nonnative species); and (5) localized or subregional impacts such as sea-level rise. In addition to group discussions, workshop participants—as well as other grassland experts who were unable to attend the workshop—completed a preworkshop survey concerning challenges and opportunities for grassland conservation. Findings reported here under each of these topics represent ideas, problems, hypotheses, and questions identified by a diverse community of grassland managers and researchers which may be addressed by future research and monitoring in southeastern grassland ecosystems to help guide science-based conservation of grassland-dependent species.

Alabama, Arkansas, Florida, Georgia, Kentucky, Lou↗

Defining conservation priorities for freshwater fishes according to taxonomic, functional, and phylogenetic diversity

To date, the predominant use of systematic conservation planning has been to evaluate and conserve areas of high terrestrial biodiversity. Although studies in freshwater ecosystems have received recent attention, research has rarely considered the potential trade-offs between protecting different dimensions of biodiversity and the ecological processes that maintain diversity. We provide the first systematic prioritization for freshwaters (focusing on the highly threatened and globally distinct fish fauna of the Lower Colorado River Basin, USA) simultaneously considering scenarios of: taxonomic, functional, and phylogenetic diversity; contemporary threats to biodiversity (including interactions with nonnative species); and future climate change and human population growth. There was 75% congruence between areas of highest conservation priority for different aspects of biodiversity, suggesting that conservation efforts can concurrently achieve strong complementarity among all types of diversity. However, sizable fractions of the landscape were incongruent across conservation priorities for different diversity scenarios, underscoring the importance of considering multiple dimensions of biodiversity and highlighting catchments that contribute disproportionately to taxonomic, functional, and phylogenetic diversity in the region. Regions of projected human population growth were not concordant with conservation priorities; however, higher human population abundance will likely have indirect effects on native biodiversity by increasing demand for water. This will come in direct conflict with projected reductions in precipitation and warmer temperatures, which have substantial overlap with regions of high contemporary diversity. Native and endemic fishes in arid ecosystems are critically endangered by both current and future threats, but our results highlight the use of systematic conservation planning for the optimal allocation of limited resources that incorporates multiple and complementary conservation values describing taxonomic, functional, and phylogenetic diversity.

Ecological Applications↗

The extra mile: Ungulate migration distance alters the use of seasonal range and exposure to anthropogenic risk

Partial migration occurs across a variety of taxa and has important ecological and evolutionary consequences. Among ungulates, studies of partially migratory populations have allowed researchers to compare and contrast performance metrics of migrants versus residents and examine how environmental factors influence the relative abundance of each. Such studies tend to characterize animals discretely as either migratory or resident, but we suggest that variable migration distances within migratory herds are an important and overlooked form of population structure, with potential consequences for animal fitness. We examined whether the variation in individual migration distances (20–264 km) within a single wintering population of mule deer ( Odocoileus hemionus ) was associated with several critical behavioral attributes of migration, including timing of migration, time allocation to seasonal ranges, and exposure to anthropogenic mortality risks. Both the timing of migration and the amount of time animals allocated to seasonal ranges varied with migration distance. Animals migrating long distances (150–250 km) initiated spring migration more than three weeks before than those migrating moderate (50–150 km) or short distances (<50 km). Across an entire year, long-distance migrants spent approximately 100 more days migrating compared to moderate- and short-distance migrants. Relatedly, winter residency of long-distance migrants was 71 d fewer than for animals migrating shorter distances. Exposure to anthropogenic mortality factors, including highways and fences, was high for long-distance migrants, whereas vulnerability to harvest was high for short- and moderate-distance migrants. By reducing the amount of time that animals spend on winter range, long-distance migration may alleviate intraspecific competition for limited forage and effectively increase carrying capacity. Clear differences in winter residency, migration duration, and risk of anthropogenic mortality among short-, moderate-, and long-distance migrants suggest fitness trade-offs may exist among migratory segments of the population. Future studies of partial migration may benefit from expanding comparisons of residents and migrants, to consider how variable migration distances of migrants may influence the costs and benefits of migration.

Wyoming↗

Advances in interpretation of subsurface processes with time-lapse electrical imaging

Electrical geophysical methods, including electrical resistivity, time-domain induced polarization, and complex resistivity, have become commonly used to image the near subsurface. Here, we outline their utility for time-lapse imaging of hydrological, geochemical, and biogeochemical processes, focusing on new instrumentation, processing, and analysis techniques specific to monitoring. We review data collection procedures, parameters measured, and petrophysical relationships and then outline the state of the science with respect to inversion methodologies, including coupled inversion. We conclude by highlighting recent research focused on innovative applications of time-lapse imaging in hydrology, biology, ecology, and geochemistry, among other areas of interest.

Hydrological Processes↗

An evaluation of silver-stage American Eel conspecific chemical cueing during outmigration

American Eel Anguilla rostrata abundance has declined in recent decades, in part because sexually maturing, silver-stage adults, outmigrating from freshwater to oceanic spawning grounds, encounter migratory blockades or perish when passing through active hydroelectric turbines. To help improve downstream passage effectiveness and increase survival rates, the role of silver-stage American Eel conspecific chemical cueing during outmigration was investigated using a new type of bioassay. Inside a laboratory flume, downstream-swimming eels were exposed to both live (putative attractant) and dead (putative repellent) conspecific washings to determine whether their trajectory of downstream movement, level of activity, or time spent inside targeted areas of the arena changed after exposure. Silver eels were not attracted to or repulsed by either odor, as none of five scoring metrics indicated a behavioral response. Results did not support the hypothesis that conspecific chemical cueing is a mechanism for downstream migration coordination or danger avoidance; however responses may not have been readily apparent in this type of assay. Fisheries managers may opt to focus future research on more feasible restoration efforts using alternate experimental designs to remedy this ecological issue.

Environmental Biology of Fishes↗

Conservation status of freshwater gastropods of Canada and the United States

This is the first American Fisheries Society conservation assessment of freshwater gastropods (snails) from Canada and the United States by the Gastropod Subcommittee (Endangered Species Committee). This review covers 703 species representing 16 families and 93 genera, of which 67 species are considered extinct, or possibly extinct, 278 are endangered, 102 are threatened, 73 are vulnerable, 157 are currently stable, and 26 species have uncertain taxonomic status. Of the entire fauna, 74% of gastropods are imperiled (vulnerable, threatened, endangered) or extinct, which exceeds imperilment levels in fishes (39%) and crayfishes (48%) but is similar to that of mussels (72%). Comparison of modern to background extinction rates reveals that gastropods have the highest modern extinction rate yet observed, 9,539 times greater than background rates. Gastropods are highly susceptible to habitat loss and degradation, particularly narrow endemics restricted to a single spring or short stream reaches. Compilation of this review was hampered by a paucity of current distributional information and taxonomic uncertainties. Although research on several fronts including basic biology, physiology, conservation strategies, life history, and ecology are needed, systematics and curation of museum collections and databases coupled with comprehensive status surveys (geographic limits, threat identification) are priorities.

Fisheries↗

Quantitative and qualitative approaches to identifying migration chronology in a continental migrant

The degree to which extrinsic factors influence migration chronology in North American waterfowl has not been quantified, particularly for dabbling ducks. Previous studies have examined waterfowl migration using various methods, however, quantitative approaches to define avian migration chronology over broad spatio-temporal scales are limited, and the implications for using different approaches have not been assessed. We used movement data from 19 female adult mallards (Anas platyrhynchos) equipped with solar-powered global positioning system satellite transmitters to evaluate two individual level approaches for quantifying migration chronology. The first approach defined migration based on individual movements among geopolitical boundaries (state, provincial, international), whereas the second method modeled net displacement as a function of time using nonlinear models. Differences in migration chronologies identified by each of the approaches were examined with analysis of variance. The geopolitical method identified mean autumn migration midpoints at 15 November 2010 and 13 November 2011, whereas the net displacement method identified midpoints at 15 November 2010 and 14 November 2011. The mean midpoints for spring migration were 3 April 2011 and 20 March 2012 using the geopolitical method and 31 March 2011 and 22 March 2012 using the net displacement method. The duration, initiation date, midpoint, and termination date for both autumn and spring migration did not differ between the two individual level approaches. Although we did not detect differences in migration parameters between the different approaches, the net displacement metric offers broad potential to address questions in movement ecology for migrating species. Ultimately, an objective definition of migration chronology will allow researchers to obtain a comprehensive understanding of the extrinsic factors that drive migration at the individual and population levels. As a result, targeted conservation plans can be developed to support planning for habitat management and evaluation of long-term climate effects.

PLoS ONE↗

Amphibian population declines: 30 Years of progress in confronting a complex problem

In 1989, it dawned on participants at the First World Congress of Herpetology that observed declines in amphibian populations might actually be global in scope and unprecedented in severity. Three decades of research since then has produced an enormous increase in our knowledge of amphibian ecology and appreciation of the complexity of possible causes for amphibian population declines. In September 2019, 30 yr after the First World Congress ended, a day-long, international symposium on amphibian population declines was held at the Redpath Museum of McGill University in Montreal, Canada. Symposium participants drew upon the knowledge gained over three decades of study to look ahead with fresh ideas to address this vital aspect of the global decline of biodiversity. Despite tremendous progress over the past three decades there is still much about amphibian ecology, population biology, and pathology that remains unknown. Amphibian declines have turned out to be more complex than originally expected and the result of multiple possible causes acting across landscapes, among taxa, or between populations in ways that are not at all uniform. The papers in this special issue of Herpetologica , which stem from the symposium, explore much of our current understanding of amphibian declines and their causes.

Herpetologica↗

Testing assumptions in the use of PIT tags to study movement of Plethodon salamanders

Studying the movements of organisms that live underground for at least a portion of their life history is challenging, given the state of current technology. Passive integrated transponders (PIT tags) provide a way to individually identify and, more recently, study the movement of smaller animals, including those that make subterranean movements. However, there are widespread assumptions of the use of PIT tags that remain problematic. We tested the effects of PIT-tag implantation on growth and survival, along with the effects of electromagnetic fields for reading PIT tags on behavior, of the smallest salamander that has been PIT-tagged: the Red-Backed Salamander. We found no effect of PIT tags on growth or survival. Using a mesocosm experiment, we also found that electromagnetic effects associated with reading PIT tags, had no effect on salamander behavior. Further, we describe a novel PIT antenna and soil mesocosm experimental arena for studying belowground movements of woodland salamanders. Collectively, these studies suggest that the use of PIT tags do not influence the growth, survival, or behavior of Red-Backed Salamanders. Given the challenges of studying salamanders that live underground and the impending changes in climate and landscapes, this research suggests that PIT tags remain a viable tool for studying the movement ecology of salamanders under global change.

Journal of Herpetology↗

Cost, accuracy, and consistency comparisons of land use maps made from high-altitutde aircraft photography and ERTS imagery

Accuracy analyses for the land use maps of the Central Atlantic Regional Ecological Test Site were performed for a 1-percent sample of the area. Researchers compared Level II land use maps produced at three scales, 1:24,000, 1:100,000, and 1:250,000 from high-altitude photography, with each other and with point data obtained in the field. They employed the same procedures to determine the accuracy of the Level I land use maps produced at 1:250,000 from high-altitude photography and color composite ERTS imagery. The accuracy of the Level II maps was 84.9 percent at 1:24,000, 77.4 percent at 1:100,000, and 73.0 percent at 1:250,000. The accuracy of the Level I 1:250,000 maps produced from high-altitude aircraft photography was 76.5 percent and for those produced from ERTS imagery was 69.5 percent The cost of Level II land use mapping at 1:24,000 was found to be high ($11.93 per km2 ). The cost of mapping at 1:100,000 ($1.75) was about 2 times as expensive as mapping at 1:250,000 ($.88), and the accuracy increased by only 4.4 percent. Level I land use maps, when mapped from highaltitude photography, were about 4 times as expensive as the maps produced from ERTS imagery, although the accuracy is 7.0 percent greater. The Level I land use category that is least accurately mapped from ERTS imagery is urban and built-up land in the non-urban areas; in the urbanized areas, built-up land is more reliably mapped.

Final Report↗

Chronic wasting disease—Status, science, and management support by the U.S. Geological Survey

The U.S. Geological Survey (USGS) investigates chronic wasting disease (CWD) at multiple science centers and cooperative research units across the Nation and supports the management of CWD through science-based strategies. CWD research conducted by USGS scientists has three strategies: (1) to understand the biology, ecology, and causes and distribution of CWD; (2) to assess and predict the spread and persistence of CWD in wildlife and the environment; and (3) to develop tools for early detection, diagnosis, surveillance, and control of CWD.

Open-File Report↗

Aeolian nutrient fluxes following wildfire in sagebrush steppe: Implications for soil carbon storage

Pulses of aeolian transport following fire can profoundly affect the biogeochemical cycling of nutrients in semi-arid and arid ecosystems. Our objective was to determine horizontal nutrient fluxes occurring in the saltation zone during an episodic pulse of aeolian transport that occurred following a wildfire in a semi-arid sagebrush steppe ecosystem in southern Idaho, USA. We also examined how temporal trends in nutrient fluxes were affected by changes in particle sizes of eroded mass as well as nutrient concentrations associated with different particle size classes. In the burned area, total carbon (C) and nitrogen (N) fluxes were as high as 235 g C m????'1 d????'1 and 19 g N m????'1 d????'1 during the first few months following fire, whereas C and N fluxes were negligible in an adjacent unburned area throughout the study. Temporal variation in C and N fluxes following fire was largely attributable to the redistribution of saltation-sized particles. Total N and organic C concentrations in the soil surface were significantly lower in the burned relative to the unburned area one year after fire. Our results show how an episodic pulse of aeolian transport following fire can affect the spatial distribution of soil C and N, which, in turn, can have important implications for soil C storage. These findings demonstrate how an ecological disturbance can exacerbate a geomorphic process and highlight the need for further research to better understand the role aeolian transport plays in the biogeochemical cycling of C and N in recently burned landscapes. ?? Author(s) 2011. CC Attribution 3.0 License.

Biogeosciences↗

Aeolian nutrient fluxes following wildfire in sagebrush steppe: Implications for soil carbon storage

. Pulses of aeolian transport following fire can profoundly affect the biogeochemical cycling of nutrients in semi-arid and arid ecosystems. Our objective was to determine horizontal nutrient fluxes occurring in the saltation zone during an episodic pulse of aeolian transport that occurred following a wildfire in a semi-arid sagebrush steppe ecosystem in southern Idaho, USA. We also examined how temporal trends in nutrient fluxes were affected by changes in particle sizes of eroded mass as well as nutrient concentrations associated with different particle size classes. In the burned area, total carbon (C) and nitrogen (N) fluxes were as high as 235 g Cm -1 d -1 and 19 g N m -1 d -1 during the first few months following fire, whereas C and N fluxes were negligible in an adjacent unburned area throughout the study. Temporal variation in C and N fluxes following fire was largely attributable to the redistribution of saltation-sized particles. Total N and organic C concentrations in the soil surface were significantly lower in the burned relative to the unburned area one year after fire. Our results show how an episodic pulse of aeolian transport following fire can affect the spatial distribution of soil C and N, which, in turn, can have important implications for soil C storage. These findings demonstrate how an ecological disturbance can exacerbate a geomorphic process and highlight the need for further research to better understand the role aeolian transport plays in the biogeochemical cycling of C and N in recently burned landscapes.

Idaho↗

Handbook of ecotoxicology, second edition

Handbook of Ecotoxicology, Second Edition focuses on toxic substances and how they affect ecosystems worldwide. It presents methods for quantifying and measuring ecotoxicological effects in the field and in the lab, as well as methods for estimating, predicting, and modeling in ecotoxicology studies. Completely revised and updated with 18 new chapters, this second edition includes contributions from over 75 international experts. Also, a Technical Review Board reviewed all manuscripts for accuracy and currency. This authoritative work is the definitive reference for students, researchers, consultants, and other professionals in the environmental sciences, toxicology, chemistry, biology, and ecology - in academia, industry, and government.

Book↗

A new map of global ecological land units — An ecophysiographic stratification approach

In response to the need and an intergovernmental commission for a high resolution and data-derived global ecosystem map, land surface elements of global ecological pattern were characterized in an ecophysiographic stratification of the planet. The stratification produced 3,923 terrestrial ecological land units (ELUs) at a base resolution of 250 meters. The ELUs were derived from data on land surface features in a three step approach. The first step involved acquiring or developing four global raster datalayers representing the primary components of ecosystem structure: bioclimate, landform, lithology, and land cover. These datasets generally represent the most accurate, current, globally comprehensive, and finest spatial and thematic resolution data available for each of the four inputs. The second step involved a spatial combination of the four inputs into a single, new integrated raster dataset where every cell represents a combination of values from the bioclimate, landforms, lithology, and land cover datalayers. This foundational global raster datalayer, called ecological facets (EFs), contains 47,650 unique combinations of the four inputs. The third step involved an aggregation of the EFs into the 3,923 ELUs. This subdivision of the Earth’s surface into relatively fine, ecological land areas is designed to be useful for various types of ecosystem research and management applications, including assessments of climate change impacts to ecosystems, economic and non-economic valuation of ecosystem services, and conservation planning.

Book↗

Accuracy and consistency comparisons of land use and land cover maps made from high-altitude photographs and Landsat multispectral imagery

Accuracy analyses for land use and land cover maps of the 74712-km 2 Central Atlantic Regional Ecological Test Site were performed for a 1-percent sample of the area. Researchers compared Level II land use and land cover maps produced at three scales, 1:24000, 1:100000, and 1:250000 from high-altitude photographs, with point data obtained in the field. The same procedures were employed to determine the accuracy of the Level I land use and land cover produced at 1:250 000 scale from high-altitude photographs and color composite Landsat imagery. The accuracy of the Level II maps was 85 percent at 1:24 000, 77 percent at 1:100 000, and 73 percent at 1:250 000. The accuracy of the Level I 1:250000 maps produced from high-altitude photographs was 77 percent and for those produced from Landsat multispectral imagery was 70 percent. The accuracy of the Level I land use maps produced using Landsat imagery is approximately that of the Level I land use maps produced from high-altitude photography with the exception of urban and built-up land. No built-up land was identified from Landsat imagery in the non-urban areas.

Journal of Research of the U.S. Geological Survey↗

Navigating the science-policy interface

As a wildlife population ecologist who wants to conduct useful science, I find the Endangered Species Act (ESA), like other federal wildlife statutes, an intriguing read. The topic is in my wheelhouse—fish, wildlife, and plants, with a focus at the population and species levels. There is an emphasis on science, in fact, the “best scientific and commercial data available.” And there are intriguing questions: what threats does a species face? What habitat would be critical for its survival? Could any federal actions put the species or critical habitat in greater peril? I am not alone in this attraction. Hundreds of scientists continue to consider the types of scientific analysis suggested by the ESA. The enthusiasm is palpable. If the first cursory read of the ESA is intriguing to me as a scientist, the second close read is tantalizing—I realize that something very attractive is just out of reach. I know how to estimate the probability of extinction, but I do not know what “in danger of extinction” means. I know how to evaluate the incremental change in status that might arise from some level of proposed take, but I do not know what “is not likely to jeopardize the continued existence” of a species means. The standards expressed in the statute are not stated in purely scientific terms. Thus, ESA decisions cannot be based solely on science, and require additional policy interpretation. Clarity about these policy interpretations—even awareness that they are needed—can be hard to find, leaving a gap between what I can provide as a scientist and what an ESA decision maker needs. This awareness of the interaction between science and policy is also occurring in the larger field of conservation science, where there has been an increasing recognition of a research-implementation gap, the need for actionable science, and the promise of translational ecology. All of these terms emphasize that science alone does not result in action; instead, action arises out of decisions that are informed both by science and by values. At the interface of science and policy, a scientist can deliver relevant knowledge, and a decision maker can explain the policy context in which that science is needed. As a scientist wanting to conduct useful science, I crave this two-way conversation. But how can this conversation be structured in a meaningful and appropriate way? In this chapter, I explore how decision analysis can be used to navigate the science-policy interface for ESA decisions. Decision analysis is a large, well-established field that studies how decisions are made and how they could be made, with explicit attention given to clarifying and separating the values-based and science-based elements of a decision; identifying the impediments that make a decision difficult; and providing tools to overcome those impediments. There have been concerted efforts to apply formal decision analysis to ESA decisions, but the practice is not yet widespread across both the U.S. Fish and Wildlife Service and the National Marine Fisheries Service (the Services). The chapter begins with an introduction to decision analysis and how it seeks to bridge the science-policy interface. In subsequent sections, I explore how a decision analyst might frame listing and reclassification decisions, recovery planning, section 7 consultation, budget allocations, and a few other ESA decisions, with an emphasis on two questions: for each type of decision, what policy clarifications does the decision maker need to make; and knowing the policy context, what type of scientific assessment is needed. In the final discussion, I identify common themes among the types of decisions, and offer thoughts on how decision analysis could be more widely used to integrate science into ESA decisions.

Book chapter↗

An integrative ecological drought framework to span plant stress to ecosystem transformation

Droughts have increased globally in the twenty-first century and are expected to become more extreme and widespread in the future. Assessments of how drought affects plants and ecosystems lack consistency in scope and methodology, confounding efforts to mechanistically interpret structural and functional impacts and predict future transformations under climate change. To promote integration among studies, we identify water deficit conditions that are ecologically meaningful, clarify the stages in which ecological drought progresses, and consider approaches to synthesize drought effects across multiple species and ecosystems. This improved ecological drought framework reveals advantages of using different ecological drought metrics and strengthens approaches to distinguish ecosystem stress from crossing an irreversible threshold. We employ several well-studied examples from water-limited ecosystems, which contain plants that are often at their physiological limits and highly responsive to climate variability. We suggest that emerging research on early warning signs, drought recovery, and the effects of land management interventions be incorporated into the ecological drought framework. An integrative approach to understand ecological drought can accelerate scientific advancement and create opportunity to adapt and prepare for crossing irreversible ecosystem thresholds.

Ecosystems↗