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Results for “Deep Sea Research Part II: Topical Studies in Oceanography”

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USGS2025

Constraining large magnitude event source and path effects using ground motion simulations

The purpose of this study is to use ground motion simulations to investigate ways in which source and path effects for large magnitude events can be represented in non-ergodic GMMs. While we initially developed computation techniques using CyberShake simulations, the range of magnitudes and source-site combinations is not adequate to replicate what is observed empirically. We therefore designed a new ground motion simulation study, which includes earthquakes with a large range of magnitudes distributed uniformly on a fault plane, and sites covering a large range of rupture distances and azimuths. After running a large suite of simulations (M4-M7), we then develop a non-ergodic GMM with the simulation data. We find that the within-site residuals are dominated by the radiation pattern, rupture directivity, and slip patterns. Next, we modify an existing rupture directivity model to fit and remove the observed radiation pattern and rupture directivity from the residuals. We also minimize the contributions of slip patterns by averaging the within-site residuals among multiple source realizations. Finally, after removing the source effects from the within-site residuals, we compare the path effects computed with different magnitude groups using two approaches. The first approach only considers the small events that have the same shortest path to a site with the large events, while the second approach considers all small events on the fault plane. The results indicate that the path effects of large events cannot be satisfactorily approximated with that of small events using either approach.

Conference Paper↗

USGS2025

Wetter winters, drier summers: Quantifying the change in hydrological response around the Puget Sound area using the wflow_sbm hydrological model and CMIP6 projections

Climate change is expected to impact hydrological regimes worldwide, including the Pacific Northwest of the United States. This study investigates how climate change will affect river discharge in the Puget Sound region of the State of Washington, with a focus on King and Pierce Counties. We simulated river discharge under historical and future conditions using the physically based, spatially distributed wflow_sbm hydrological model, which was calibrated and validated against U.S. Geological Survey discharge records. Future forcing was based on an ensemble of six high-resolution CMIP6 climate models, which were bias corrected using empirical quantile mapping. The results indicate a decrease in summer discharges (5–10%) and an increase in winter discharges (5–10%) across the study region. The high discharges (90th percentile) are projected to increase in winter, and the low discharges are projected to decrease in summer, due to shifts in precipitation regimes, snowpack hydrology, and evapotranspiration. However, variability between individual CMIP6 models often exceeds the magnitude of ensemble mean changes, underscoring substantial uncertainty in climate projections and the importance of including multiple climate models in climate change analysis. Furthermore, model consensus increased with elevation, which could be the result of the higher elevation areas being driven by less diverse hydrological processes. These findings highlight potential challenges for regional water management, ecosystem health, and flood risk mitigation in the Puget Sound region under future climate conditions.

EarthArXiv↗

USGS2026

A temporal look at the influence of topographic amplification on earthquake-triggered landslides in 3D seismic simulations

Earthquakes are a primary trigger for landslides, often leading to catastrophic consequences. While numerous studies have explored the spatial distribution of earthquake-triggered landslides, understanding the interaction between seismic waves and topography remains a critical challenge. Topographic irregularities can cause seismic wave amplification, altering ground shaking, and can trigger landslides that are challenging for predictive models to anticipate. This study investigates the spatial and temporal evolution of topographically amplified landslides, focusing on coseismic landslides triggered by the Mw 7.5 mainshock of the 2018 Papua New Guinea earthquake and post-seismic landslides associated with its four aftershocks, each exceeding Mw 6.0. We employ low-frequency, three-dimensional numerical ground shaking simulations and data-driven multivariate analyses to examine how landslides evolved from the coseismic to post-seismic periods. Our findings reveal a spatial shift in landslide distribution, in which the mainshock triggered slope failures predominantly on steep hillslopes, and the aftershocks triggered landslides on gentler slopes, often near geologic boundaries. We attribute this transition partly to the earthquake legacy effect of the mainshock, where the mainshock caused weakening of these hillslopes, making them more prone to failure when aftershocks occur. Additionally, the concentration of failures along geologic contacts in the post-seismic phase suggests that site amplification, stemming from contrasts in subsurface materials, exerts a key influence on landslide occurrence. Although not explicitly captured in our current numerical simulations, this mechanism warrants further investigation for more accurate hazard modeling.

JGR Solid Earth↗

USGS2024

Bathymetric and velocimetric surveys at highway bridges crossing the Missouri River between Kansas City and St. Louis, Missouri, May 19–26, 2021

Bathymetric and velocimetric data were collected by the U.S. Geological Survey, in cooperation with the Missouri Department of Transportation, near nine bridges at eight highway crossings of the Missouri River between Kansas City and St. Louis, Missouri, from May 19 to 26, 2021. A multibeam echosounder mapping system was used to obtain channel-bed elevations for river reaches about 1,640 to 1,840 feet (ft) longitudinally and generally extending laterally across the active channel from bank to bank during low to moderate flood-flow conditions. These surveys provided channel geometry and hydraulic conditions at the time of the surveys and provided characteristics of scour holes that may be useful in developing or verifying predictive guidelines or equations for computing potential scour depth. These data also may be useful to the Missouri Department of Transportation as a low to moderate flood-flow assessment of the bridges for stability and integrity issues with respect to bridge scour during floods. Bathymetric data were collected around every in-channel pier. Scour holes were present at most piers for which bathymetry could be obtained, except those on banks or surrounded by riprap. Occasionally, scour holes were minor and difficult to discern from nearby dunes and ripples. All the bridge sites in this study were previously surveyed and documented in previous studies. Comparisons between bathymetric surfaces from the previous surveys and those of the current (2021) study do not indicate any consistent correlation between channel-bed elevations and streamflow conditions. The average difference between the bathymetric surfaces varied from 1.59 ft higher to 0.95 ft lower in 2021 than 2017, which corresponds to a gain of 100,200 cubic yards and a loss of 55,800 cubic yards, respectively. The average difference between the bathymetric surfaces varied from 2.74 ft higher to 3.05 ft lower in 2021 than 2013, which corresponds to a gain of 111,500 cubic yards and a loss of 169,200 cubic yards, respectively. The average difference between the bathymetric surfaces varied from 4.52 ft higher to 1.38 ft lower in 2021 than 2011, which corresponds to a gain of 221,100 cubic yards and a loss of 90,300 cubic yards, respectively. The most substantial overall net gain was 221,100 cubic yards between 2011 and 2021 at structures L0550 and A4497 at Jefferson City (site 20). The large net gain likely results from a combination of the mitigation of the scour holes near pier 4 of both bridges and the substantially lower flow in 2021 than in 2011. Alternatively, the most substantial overall net loss was 169,200 cubic yards between 2013 and 2021 at structure A6288 at Hermann (site 21), despite comparable streamflows. Pier size, nose shape, and skew to approach flow had a substantial effect on the size of the scour hole observed at a given pier. Larger and deeper scour holes were present at piers with wide or blunt noses caused by exposed footings or caissons. When a pier was skewed to primary approach flow, the scour hole was generally deeper and larger than at a similar pier without skew; furthermore, the shape of the scour hole near skewed piers in this study generally was longer and deeper on the side with impinging flow. At structure A6288 at Hermann (site 21), the scour hole near pier 5 was difficult to discern from nearby dunes and ripples, whereas the upstream edge of the footing was visible at pier 4, which likely contributes to the larger scour hole near that pier; the top of the footing may blunt the horseshoe vortex at pier 5, but the exposed front of the footing may exacerbate the vortex at pier 4.

Missouri↗

USGS2026

Escherichia coli monitoring and assessment in 2022 and 2023 after beach restoration at Lake St. Clair Metropark Beach, Macomb County, Michigan

Lake St. Clair Metropark Beach in Michigan has a history of closures because of elevated Escherichia coli ( E. coli ) concentrations in its recreational waters. To reduce closures, restoration projects were implemented in 2021 to deter waterfowl from congregating on the beach. In this study, the U.S. Geological Survey, in cooperation with the Michigan Department of the Environment, Great Lakes, and Energy and in collaboration with Huron-Clinton Metroparks and the Macomb County Health Department, monitored E. coli from 2022–23 in surface water, shallow groundwater, and sediment at Lake St. Clair Metropark Beach. Results were compared to data from a prerestoration (2018–19) study. A significant decrease in daily geometric mean E. coli concentrations in surface water was observed postrestoration, but the number of high concentration events increased. This resulted in more frequent beach closures postrestoration. Surface-sediment E. coli concentrations significantly decreased after restoration, and waterfowl populations generally decreased from 2021 to 2023, suggesting that the deterrence measures could be influencing E. coli concentrations in surface sediments and surface water. Groundwater E. coli concentrations were orders of magnitude higher than those in surface water and revealed no change correlated with restoration. Seepage measurements indicated that groundwater occasionally discharges into surface water, potentially providing a transport mechanism for E. coli to reach the lake. Continued monitoring and consideration of environmental factors could help to better understand the beach system.

Michigan↗

USGS2026

An improved empirical model for predicting postfire debris-flow volume in the western United States

Reliable estimates of debris-flow volume can be used to help predict the magnitude of debris-flow hazards following wildfire in the western United States. In this study, we compiled and used a database of 227 postfire debris-flow volumes that were collected across the western United States to develop a multiple linear regression model for predicting postfire debris-flow volume. We explored 36 predictor variables related to rainfall, terrain, and fire characteristics, and selected the model with the combination of variables that yielded the most accurate predictions of debris-flow volume. We evaluated model performance against the entire volume database, as well as against four subsets of volume data from southern California, the Intermountain West, the Southwest, and regions with limited volume data, such as northern California and Washington. We also compared model performance against 3 existing postfire debris-flow volume models that were developed for use in southern California, the Intermountain West, and the Southwest. We demonstrate that the new volume model performs as well as the regional models in the regions for which they were developed and outperforms existing models when applied to volumes from data-limited regions in the western United States. These results indicate that the debris-flow volume model introduced in this study can be used to improve postfire hazard assessments across the western United States, especially outside of southern California.

Arizona, California, Colorado, New Mexico, Utah, W↗

USGS2025

Hydrologic variability and groundwater age of springs in eastern Oregon and northern Nevada, USA

The ecological importance of springs in semiarid regions is far greater than their small size and sparse distribution, yet little is known about the hydrologic functioning of these systems. During 2016–22, 261 springs were visited in the volcanic terrane of eastern Oregon and northern Nevada. When conditions were suitable, measurements of discharge, water temperature, and specific conductance were made, and samples for the analysis of carbon-14, tritium, and water stable isotopes (WSI) were collected. A subset of 60 springs was revisited during different seasons in the same year and during the dry season in multiple years to evaluate variability in discharge, chemistry, and groundwater age. Specific conductance and WSI varied considerably among springs across the study area but were unexpectedly stable across seasons and years at individual springs. Seasonal and interannual variability in spring discharge was related to the residence time of the discharging groundwater. Springs discharging older groundwater (10 3 –10 4 years) had significantly less variability in their discharge compared to springs discharging younger groundwater (10 0 –10 1 years). Variability among springs discharging younger groundwater included cessation of late-summer discharge at 18 % of the repeat-visit springs. A logistic regression model predicted the age of discharging spring water with 89 % accuracy using only the spring latitude, longitude, elevation, and δ 2 H value. This study framework provides a simple, inexpensive, and robust method to provisionally assess the hydrologic behavior of springs having little or no prior information in understudied, semiarid regions across the globe.

Nevada, Oregon↗

USGS2026

Constraining source and path effects of large magnitude earthquakes using ground motion simulations

The purpose of this study is to use ground‐motion simulations to investigate ways in which source and path effects for large‐magnitude earthquakes can be represented in nonergodic ground‐motion models (GMMs). To achieve this, we designed a ground‐motion study in the San Francisco Bay Area that includes earthquakes with a broad range of magnitudes distributed uniformly on a fault plane, and sites covering a large range of rupture distances and azimuths. After running a large suite of kinematic simulations (magnitude 4–7), we then develop a nonergodic GMM with the simulated data. We find that trends in the within‐site residuals are affected significantly by the earthquake radiation pattern, rupture directivity, and slip patterns. Next, we modify an existing rupture directivity model to fit and remove the observed radiation pattern and rupture directivity from the residuals. We also minimize the contributions of slip patterns by averaging the within‐site residuals among multiple source realizations. Finally, after removing the source effects from the within‐site residuals, we compare the path effects computed with different magnitude groups using two approaches. The first approach only considers the small events that have the same shortest path to a site as the large events, whereas the second approach considers all small events on the fault plane. The results indicate that it is difficult to satisfactorily approximate the path effects of large events with those of small events using either approach, at least in the case of simulations.

California↗

USGS2025

A review of post-wildfire adaptations of surface-water-quality models: Synthesis, gaps, and opportunities

As wildfires increasingly affect water-supply watersheds, the demand for models to predict water-quality responses is increasing. This work reviews and synthesizes existing post-wildfire applications of water-quality models in the context of geographic and ecohydrological distribution, hydrologic and water-quality response process representation, model parameterization, model and input data scales, model calibration data availability, as well as calibration and performance evaluation approaches. Emphasis is placed on models that simulate water-quality output, rather than sediment and erosional response as the primary focus. Here, identified gaps and opportunities to advance the post-wildfire application of water-quality models include: 1. applying models in under-represented geographic and ecohydrologic regions, 2. simulating multiple streamflow generation mechanisms, including groundwater, with an emphasis on shifting dominant flow pathways as the landscape recovers following wildfire, 3. adding studies that include the simulation of metals, 4. incorporating more biogeochemical and in-stream processes to model applications, 5. applying finer spatial and temporal resolution of precipitation data input as well as finer spatial resolution hydrologic response units, 6. implementing fully distributed grid or element models or finer resolution response units to capture burn severity heterogeneity, 7. collecting enhanced water-quality data for model calibration and validation, 8. conducting model-intercomparison studies, and 9. developing model parameter value guidance in post-wildfire applications. These identified gaps and opportunities may assist users in deciding on key processes and approaches to consider in modeling post-wildfire water-quality conditions.

Science of the Total Environment↗

USGS2024

Seismic response comparison of a historical masonry church subject to real and simulated ground motions

In recent years, advanced numerical models and high-performance computing have facilitated the utilization of ground motion time series in the assessment of the non-linear dynamic behavior of historic masonry structures. Since recorded accelerograms can be sparse for specific analysis conditions, stochastic ground motion simulations have become a viable alternative to overcome this limitation. This study simulates the recorded acceleration time series of the Central Italy 2016 earthquake event at the closest station to the town of Macerata using a site-based stochastic approach. The simulated motions are seismologically evaluated using a goodness-of-fit method in terms of various intensity measures. The simulated records, in conjunction with real records, are used to study the non-linear dynamic behavior of San Filippo Neri church located in Macerata. The church of San Filippo represents an important example of Baroque religious architecture in central Italy, which was damaged and closed off to the public after the 2016 earthquake events. The construction was investigated with a vast diagnostic campaign which included on-site testing and dynamic identification tests. The collected data is used to calibrate the dynamic response of a three-dimensional finite element model of the church. The model is finally used to compare the non-linear seismic responses under real and simulated ground motions with the site recorded damage. The results of structural responses demonstrate a strong agreement between the real and simulated records, providing evidence to support the validation of the site-based stochastic simulation.

Macerata↗

USGS2026

Small earthquake moment magnitude and implications for frequency–magnitude scaling of injection induced earthquakes of the Raton Basin

Accurate estimation of earthquake source parameters—such as moment magnitudes, corner frequencies, and stress drops—is essential for improving seismic hazard assessments and understanding earthquake physics. In this study, moment magnitudes ( M W ) are calculated for 31,581 earthquakes associated with wastewater injection in the Raton Basin (located along the border between northern New Mexico and southern Colorado) between 2016 and 2024 using radiative transfer theory to fit coda decay envelopes. Our results show that it is feasible to estimate moment magnitudes down to M W ~1 with coda envelopes from a small local monitoring network. Significant differences were found between M W and local magnitudes ( M L ) for small earthquakes ( M < 3.0). A linear relationship was optimized to convert M L to M W : M W = 0.7 M L + 0.96 and M W = 0.73 M L + 0.99 (for the events reported by the U.S. Geological Survey), which can be applied in future studies of Raton Basin seismicity. We find that b -values calculated employing different methods and using M L are approximately 1.0, while those using M W range from 1.2 to 1.4. A larger estimate of the b -value could influence interpretations of the statistical behavior of earthquakes associated with injection and consequently seismic hazard assessments based on a magnitude–frequency distribution. The potential differences between local versus moment magnitude-based earthquake statistics should be considered in other seismically active regions.

Colorado, New Mexico↗

USGS2026

Fully contained laboratory earthquakes: The effect of asperity aspect ratio and free surfaces

Corner frequency ( f c ) and seismic moment ( M 0 ) are key parameters derived from seismic signals that are used to characterize earthquake stress drop, rupture area, and slip. These parameters are also affected by fault geometry and boundary conditions. However, the systematic study of these effects in laboratory settings has been challenging. This study presents laboratory earthquake experiments that examine how rupture dynamics are influenced by (a) the aspect ratio of rectangular PMMA velocity-weakening (VW) asperities surrounded by the Teflon velocity-strengthening (VS) patches, and (b) whether the sides of a VW asperity are confined with VS patches or are free surfaces. We found that increasing confinement by reducing free surfaces or increasing the VW asperity aspect ratio stabilizes fault slip, so that higher normal stress is required to transition from aseismic to seismic slip. Increased confinement and high aspect ratios also reduced M 0 and increased f c , both of which were determined from the radiated seismic waves. M 0 and f c were primarily controlled by the shorter dimension of the VW asperity. Analysis of high-frequency acoustic emission signals revealed that ruptures on high-aspect-ratio VW asperities propagated more unidirectionally, whereas ruptures on square VW asperities were more complex. Further, the high-aspect-ratio asperities were more likely to be eroded by surrounding VS regions while low-aspect-ratio asperities were more likely to rupture into the VS surroundings. These results demonstrate that both the confinement from surrounding stable areas and the geometry of the seismogenic patch can affect rupture nucleation, propagation, and seismic source characteristics.

JGR Solid Earth↗

USGS2024

Assessment and characterization of ephemeral stream channel stability and mechanisms affecting erosion in Grand Valley, western Colorado, 2018–21

The Grand Valley in western Colorado is in the semiarid Southwest United States. The north side of the Grand Valley has many ungaged ephemeral streams, which are of particular interest because (1) the underlying bedrock geology, Late Cretaceous Mancos Shale, is a sedimentary rock deposit identified as a major salinity contributor to the Colorado River and (2) despite infrequent streamflows of short duration, monsoon-derived floods in these ephemeral streams can carry substantial amounts of sediment downstream, affecting upstream and downstream banks and channel cross sections. The study area is of interest, because salinity, or the total dissolved solids concentration, in the Colorado River causes an estimated $300 million to $400 million per year in economic damages in the United States, and it is estimated 62 percent of the Upper Colorado River Basin’s total dissolved solid loads originate from geologic sources. In an effort to minimize salt contributions to the Colorado River from public lands administered by the Bureau of Land Management, a comprehensive salinity control approach is typically used to reduce nonpoint sources of salinity through land management techniques and practices. In 2018, the U.S. Geological Survey, in cooperation with the Bureau of Land Management, began an assessment of ephemeral streams located on the north side of the Grand Valley, western Colorado, to characterize stream channel stability and identify mechanisms affecting erosion. The U.S. Geological Survey developed a method for automatically extracting channel cross-section geometry from existing remotely sensed terrain models. Based on estimated flood stage and surrogate streamflows, hydraulic characteristics were calculated. Furthermore, the channel geometries and hydraulic characteristics were used to estimate channel stability using a statistical model. Cross-section stabilities were determined from a stream channel stability assessment for a subset of 1,406 visited (field observed) locations out of 13,415 cross sections, which were delineated from remotely sensed terrain models. The application of Manning’s resistance equation in combination with multiple logistic regression models demonstrated channel stability can be estimated with a 0.845 goodness of fit for a validation dataset when using a combination of drainage area, width-to-depth ratio, sinuosity, and shear stress as the explanatory variables. Stream channel stability was extrapolated for 13,415 unvisited (not field observed) cross sections using the multiple logistic regression model and defined explanatory variables. Mapping of the ephemeral streams and their associated stabilities may be used by the Bureau of Land Management to prioritize areas for remediation or changes in management strategies to reduce sediment and salinity loading to the Colorado River. The study found channel stability within the ephemeral streams to be spatially variable, longitudinally discontinuous, and dictated by changes in channel bed slope. The stable ephemeral streams were relatively wide and shallow and often had smaller drainage areas with less potential for producing shear stresses capable of overcoming channel adhesion. A change in channel bed slope can provide the means necessary to generate shear stresses appropriate to initiate erosion and a subsequent stability transition to incising channels. Channel widening happens when either or both banks of an incising channel reach a critical height for mass wasting, or when channel curvature causes higher sidewall stress. Regardless, widening channels can promote increases in sinuosity and subsequently reduce steep channel bed slopes. Consequently, stable and widening channels can have comparable bed slopes, making channel bed slope a poor explanatory variable to predict channel stability overall, despite its function to initiate channel instability. The results were based on a surrogate 0.10 annual exceedance probability (AEP; return period equal to the 10-year flood) interval streamflow, although it was recognized fluctuations in streamflow would also affect channel stability. Past and current changes within the study area affect streamflow; therefore, mechanisms affecting erosion include land use disturbances, soil compaction, loss of vegetation cover, drought, less frequent and more extreme precipitation, and fires—which all intensify the potential runoff and erosion within the study area.

Colorado↗

USGS2025

Do bighorn sheep use desert tortoise burrow spoil piles as mineral licks in southern California?

In a previous study, bighorn sheep ( Ovis canadensis ) were periodically photographed by trail cameras when they visited desert tortoise ( Gopherus agassizii ) burrows in the San Bernardino Mountains near Palm Springs, California, USA. The authors suggested that bighorn sheep may utilize the excavated spoil material from burrows as a mineral lick. To test that supposition, we collected soil samples from the spoil piles and undisturbed surface soil up to 1 m away at two desert tortoise study sites with bighorn sheep at the aforementioned site and another nearby site. We hypothesized that sodium concentrations would be greater in spoil than in nearby surface soil samples. Common major cations were quantified in soil samples using inductively coupled plasma-mass spectrometry following microwave-assisted digestion to solubilize the fraction of elements that could become biologically or environmentally available. Mean sodium concentrations were greater in burrow spoil samples than in undisturbed soil samples at both sites, likely due to aqueous leaching of sodium from surface to subsurface soil horizons. Although we did not collect evidence of geophagy by bighorn sheep, the behavior is well known. However, trail camera photographs of bighorn sheep with their head next to the entrance of tortoise burrows suggests that they may periodically utilize sodium and other elements brought to the surface by desert tortoises that are otherwise unavailable to bighorn sheep on the surface.

California↗

USGS2026

Hazard potential of compound flooding from rainfall, storm surge, and groundwater in coastal New York and Connecticut

Compound flood events, the co-occurrence of multiple flood drivers, can result in flood hazard potential exceeding that of any single driver alone. To evaluate compound flooding in a semi-urbanized coastal area, historical records dating back to 1970 are used to study the co-occurrences of high precipitation, storm surge, and shallow groundwater conditions along the coastlines of New York and Connecticut. Joint return periods for coincident precipitation-surge events were computed using statistical dependence models and compared to the assumption of independence as a ratio, referred to here as a return period adjustment. Results indicate distinct seasonality where compound events in the area disproportionately occur in the cold season between October and April. Return period adjustments range from a factor of 1 to almost 9, demonstrating the range in precipitation-storm surge dependence across the study area. Across all 24 station triad locations, groundwater levels were elevated during times of precipitation- surge co-occurrence, reflecting the tendency for coastal storms and shallow groundwater conditions to co-occur seasonally. The result is a pseudo-trivariate compound flood hazard score and corresponding hazard map that integrates dependence between daily precipitation-surge events and overall monthly groundwater levels (as a precondition) into a relative compound hazard score. The location with the highest compound flood hazard score is on the south shore of Long Island, as well as locations across coastal Connecticut where groundwater levels compound the co-occurrence of heavy precipitation and storm surge.

Connecticut, New York↗

USGS2025

Manipulation of the Symbiodiniaceae microbiome confers multigenerational impacts on symbioses and reproductive ecology of its Exaiptasia diaphana host

Symbiodiniaceae-associated microbiota strongly influence cnidarian symbioses. We systematically reduced the bacterial and fungal communities associated with Symbiodiniaceae to study potential effects on the cnidarian holobiont Exaiptasia diaphana (Aiptasia). Clonal anemones were inoculated with xenic Breviolum minutum (SSB01) and microbiome-manipulated cultures after antibacterial or antifungal treatment. The asexual reproduction of pedal laceration allowed for three generations of clonal aposymbiotic Aiptasia to be utilised in this study, from the initial adult generation (G0), to the first (G1), and second (G2) generation. We inoculated small and large G1 Aiptasia with SSB01 algae and monitored onset of symbiosis, rate of algal proliferation, and holobiont characteristics. Sequencing the 16S and 18S rRNA gene regions identified significant differences in the bacterial and fungal communities of the G0 and G1 generations, alongside differences between the size classes of small and large G1 anemones. The microbiome of larger G1 individuals was distinct to the smaller G1 anemones, suggesting a microbiome maturation process. Control Breviolum minutum cultures exhibited a significantly greater proliferation rate in large G1 anemones when compared to antibacterial or antifungal treated cultures, whereas the opposite trend was documented in the small G1 anemones. Although no differences were observed between algal photochemical parameters, or the growth and polyp activity of G1 juveniles, we observed a significant influence in the production of G2 clones between treatments. Overall, we provide strong ecological implications of manipulating Symbiodiniaceae microbiome, not for the algae themselves, but for the maturation of the host Aiptasia, as well as for the cnidarian holobiont over multiple generations.

The ISME Journal↗

USGS2025

Multi-lithofacies alluvial characterization via airborne electromagnetic-borehole fusion using ordinary interval kriging and geologic constraints

Airborne electromagnetic (AEM) survey provides extensive spatial coverage and detailed resolution at the near surface and can be used to develop hydrogeological models. However, utilization of AEM data is not straightforward because AEM resistivity is an indirect measurement for inferring sediment types. This study develops an ordinary interval kriging (OIK) algorithm and a resistivity-to-multi-lithofacies (R2ML) data fusion workflow for multi-lithofacies alluvial characterization. OIK utilizes irregular interval data to construct three-dimensional (3D) resistivity fields from one-dimensional inverted AEM resistivity models. The R2ML workflow maps the resistivity field generated from OIK into a multi-facies lithological model, incorporating geologic constraints derived from well logs and geological observations. The numerical and real-world cases demonstrate that OIK is computationally efficient, accounts for 3D anisotropy, and minimizes the smoothing effect, thereby preserving resistivity contrasts and reducing interpolation uncertainty. The methodology is applied to lithologic characterization of the Mississippi River Valley alluvial aquifer (MRVA) in the Shellmound area, Mississippi, U.S. A frequency-domain AEM survey was conducted to support groundwater studies for the managed aquifer recharge (MAR) to the MRVA. The resulting lithological model, including four types of lithofacies—clay, very fine sand, fine-medium sands, and graveliferous sands, illustrates the geomorphological processes of the MRVA and implies potential MAR. The alignment between the lithological model and existing geological and hydrogeological investigations demonstrates that OIK and R2ML workflow effectively capture the subsurface architecture of the MRVA. The methods have broad applicability for characterizing alluvial aquifers through AEM-borehole data fusion, supporting sustainable groundwater management.

Mississippi↗

USGS2025

Modeling byproduct and coproduct mine production and mineral substitution using multidimensional supply curves: Application to the Cu-Co-Ni system and beyond

Rapid demand growth is expected for many metals used in the energy transition. Many of these metals are byproducts of other commodities. Byproduct production’s price response is tied to host mineral economics, complicating its supply dynamics. Moreover, many of these metals are used in applications where the material properties desired are difficult to substitute; effectively, limiting how quickly demand can adapt to changes in commodity price. Previous work has demonstrated the interconnectivity of jointly produced mineral commodities from the supply side, where the copper–cobalt–nickel system was used and demand was assumed independent across commodities. Studies to understand byproduct-coproduct market interconnectivity on the demand side are limited, while studies on the interconnectivity of supply and demand simultaneously are even more so. We propose a modification to the multicommodity supply curve method to enable inter-commodity effects on demand simultaneous with supply. In batteries, high cobaltprices may push consumers to transition to high-nickel chemistries, causing the nickel demand surface to decrease with nickel price but increase with cobaltprice, creating a two-dimensional demand surface. Below cross-price elasticities of 0.05, inter-commodity effects were found to be negligible, potentially permitting exclusion of these effects for many commodities. This additional demand curve complexity introduces potential computation challenges alongside the capacity to model many interrelated commodity systems such as rare earth elements, ferroalloys, country-oriented subsidies or restrictions, and bifurcated sustainable metals markets. By presenting the work done on multicommodity supply surfaces to date and potential new directions, this work aims to catalyze the next round of innovative approaches to modeling jointly produced commodities.

Conference Paper↗