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The field trip that changed the course of my career

After gobbling down a breakfast of sliced papaya, scrambled eggs, refried beans, and soft flour tacos, we gathered our gear and loaded it into the red zodiac that the station manager had assigned to us. My colleagues and I were headed to a pair of islands off the coast of Belize called Twin Cays, occupied by a unique group of tropical plants and animals adapted to a wet and saline habitat. Our ride from Carrie Bow Cay, home of the Smithsonian Institution’s field station, took about twenty minutes because of the choppy water. As we crossed the three-kilometer stretch from Carrie Bow to Twin Cays, I struggled to keep my seat on the bouncing pontoon and was soon soaked by salt spray. As we neared Twin Cays, the deep blue of the lagoon gave way to the turquoise and pale green colors of the shallow sand flats in the lee of the archipelago. Finally, the zodiac slowed, and we pulled into the calm channel separating the two islands. On either side of the channel was an intimidating tangle of tree trunks, branches, leaves, and aerial roots. The trees leaned out over the water and appeared poised to topple into the sea. However, they were perfectly still in the humid morning air and anchored solidly in place by arching prop roots. I sensed that I had entered an alien world, a waterlogged Terra Incognita that looked, smelled, and sounded like nothing I had ever experienced. As we slowly motored along, I peered more closely at the trees that fringed the shoreline. They had gnarled trunks and twisted branches that supported a canopy of dark green leaves. These trees were red mangroves or Rhizophora mangle, their scientific name, and were the dominant vegetation here. These oceanic mangrove islands were intertidal, which means that the trees were inundated twice a day by the sea. Their intimate relationship with the sea, however, was most apparent along the water’s edge. Long, drop roots plunged from the canopy to dangle in the crystal-clear water. Encrusted on the submerged portions of the mangrove roots were yellow and orange sponges, white and pink anemones, sharp-edged oysters, and feathery-green algae. The mangroves, it turned out, provided the only solid substrate for these sessile creatures. There were also mobile animals that I glimpsed as I leaned over the pontoon to peer into the pellucid water. Tiny fish flashed among the partially submerged roots as each one briefly flipped its body sideways to catch the sun glinting through the water. A school of mangrove snappers swam past the boat and disappeared under the overhanging creekbank, which created a shadowy haven from predators. Ribbons of turtlegrass, uprooted from the nearby reef flat, were draped on mangrove prop roots like green and brown tinsel. As the zodiac floated closer to shore, I spotted a mangrove tree crab, which stealthily crept up a tree trunk. In the distance, I could hear the hectoring cry of an osprey, as well as the periodic cheep-cheep of a mangrove warbler deeper in the forest. A soft breeze carried the faint odor of rotten eggs, which was caused by the microbially mediated production of hydrogen sulfide in the waterlogged soil. This was my first close-up view of Belize’s mangroves. The year was 1985. The movie “Back to the Future” had just premiered, PLO terrorists had hijacked the Italian cruise ship Achille Lauro, five people had died after ingesting cyanide-laced Tylenol, and Microsoft had just released Windows 1.0. I had recently gotten a Macintosh personal computer with 128k of memory (seemed like a lot back then) and was learning how to use Cricket Graph, my first software program. Until that point, I had been creating graphs by hand with ink-filled drawing pens, T-squares, and Letraset dry-transfer sheets. This was a time when the world seemed to be on the verge of dramatic changes—many that would impact me and my career as a scientist.

Book chapter↗

Quantifying microplastics in Indiana’s Lake Michigan watershed and submerged aquatic vegetation

Environmental breakdown of plastics produces synthetic microfibers, a class of microplastics that are most prevalent in surface waters. A main source of these pollutants is wastewater treatment plants which discharge into surface waters, including those that flow into Lake Michigan. Microplastics can settle into aquatic sediment or exist for lengths of time in the swash zone of the lakes; they can be ingested by organisms or concentrated in algae or other lake plankton, among other possibilities. As part of a larger Great Lakes study of the growth and senescence of submerged aquatic vegetation (SAV), the loads of synthetic microfibers in the SAV have been determined from Lake Michigan samples collected during the summer months of 2018, 2019 and 2020, and from various samples collected in the watershed and along the shoreline in Northwest Indiana. In order to effectively address microplastics pollution, a complete understanding of the distribution and fate of these pollutants is needed; this project is working toward that goal.

Indiana↗

San Francisco Estuary chlorophyll sensor and sample analysis intercomparison

This report presents an assessment of chlorophyll collection methods and anonymous results of field and laboratory comparisons in 2018 - 2019 by agencies in the San Francisco Estuary (SFE). The methods assessment and comparison exercises, with funding provided by the Delta Regional Monitoring Program and Bay Nutrient Management Strategy and in-kind contributions from participating agencies, are a first step to facilitate future comparisons and syntheses of data and inform best science practices in the region. In situ sonde comparison exercises found general agreement between two models of Yellow Springs Instrument (YSI) sensors, but the newer sensor (EXO v2 - total algae) measured higher chlorophyll fluorescence (fCHL) relative to the older YSI sensor (6-series 6025). Results may be attributed to the use of a two-point calibration and the fluorescence response of algal cultures in sensor development by the manufacturer. The laboratory comparison included participation by 12 distinct field - laboratory pairs (or groups), with one group analyzing filters using two analytical methods. Filters were collected in triplicate across three sampling events in 2018, and all sample results were pooled together. Results of statistical analyses indicated that nominal filter pore size, the grinding method associated with pigment extraction, and analytical methods do not introduce variability to the chlorophyll-a measurement (Chl-a). When Chl-a results were assessed by sample event, however, significant differences between nominal pore size and analytical methods existed; these differences could be attributed to the small sample size per event. Consistent reporting units and high-concentration calibration standards for field sensors among data collection agencies would improve the consistency and comparability of data collected in the SFE. More routine split sampling events, longer term sensor comparison exercises, and further processing and analytical comparisons that control for individual filterers may also enhance comparability in the region.

California↗

An evaluation of methods for measuring algal growth

Algal growth was expressed as milligrams dry weight per litre with use of the electronic particle counter for determining cell number and cell volume. A gravimetric constant in milligrams dry weight per cubic micrometre was determined. This constant was applicable throughout the growth curve since there was a linear relationship between total cell weight and total cell volume. Cell volume must be considered in measuring growth because there is a change in average cell volume in addition to an increase in cell numbers throughout the growth curve. Chlorella vulgaris and Selenastrum capricornutum exhibited similar growth curves when growth was expressed as cells per litre or as milligrams dry weight per litre. Chlamydomonas reinhardtii appeared to have a lower algal growth potential when measured in cells per litre but had the same growth potential as C. vulgaris and S. capricornutum when expressed as milligrams dry weight per litre. The growth rate for Scenedesmus quadricauda was less than the other three, regardless of how the results were expressed. The image analysis system was used to count different types of algae in a mixed culture. C. reinhardtii , C. vulgaris , and Anacystis nidulans were not grossly distorted by the sample preparation method and could be distinguished from one another by variations in morphology. The counts could be separated by computing the ratio of area to length for each particle and by allowing the computer to sort and count each of the three types. Typical ratios ranged from 5 to 7 for G. reinhardtii , 2 to 4 C. vulgaris , and 0.2 to 1.3 for A. nidulans . The number of types to be counted in a mixture was limited only by the ability to apply shape factors without having an overlap between each type. Both the image analysis and electronic particle counter produced equal count and size measurements. Fluorescence was a sensitive measure of growth on a laboratory prepared medium since there was a logarithmic relationship between fluorescence and cells per millilitre for both C. vulgaris and S. capricornutum . Fluorescence measurements were not satisfactory for determining growth in samples of varying chemical composition (which occurs in natural samples) because the chlorophyll-to-cell ratio varied with media composition. This was especially pronounced with C. vulgaris .

Journal of Research of the U.S. Geological Survey↗

Factors contributing to the formation of ferromanganese nodules in Oneida Lake, New York

Oneida Lake is a large, shallow, eutrophic lake situated in the Ontario lowlands of central New York State. It contains the most concentrated deposit of freshwater ferromanganese nodules (in terms of amount per unit area) yet reported in the literature. The mineralogy and bulk chemistry of these saucer-shaped nodules are similar to the mineralogy and bulk chemistry of deep-sea ferromanganese nodules, but the nodules in Oneida Lake contain considerably lower concentrations of trace metals, especially cobalt, nickel, and copper. Budgets for iron and manganese in waters from Oneida Lake and its tributaries indicate that approximately 122 t (metric tons) of iron and 23 t of manganese are lost each year from the lake waters, presumably by incorporation into sediments and ferromanganese nodules. Estimates based on nodule abundance and age of the lake suggest that iron and manganese are being incorporated into ferromanganese nodules at rates of 13 and 22 t/yr, respectively. Most iron lost from the lake waters is apparently incorporated into sediments, which contain an average of 10 times more iron than manganese. Most manganese lost from the lake waters is apparently incorporated into ferromanganese nodules, which contain an average of 1.7 times more manganese than iron. In Oneida Lake, very high rates of phytoplankton productivity, combined with almost continuous wind mixing to the bottom, provide high-pH and high-Eh conditions in most of the lake. Algae also provide an effective means of concentrating and transporting iron and manganese and thereby aid in the extensive development of ferromanganese nodule deposits.

New York↗

A pilot biodiversity inventory and monitoring protocol in support of coastal adaptation projects in tidal and nearshore subtidal habitats of Boston Harbor Islands

The Boston Harbor Islands National Recreation Area (BOHA) is at high risk to the impacts of sealevel rise (SLR) and erosion from coastal storms. In June 2021, the National Trust for Historic Preservation listed the islands as one of America’s 11 Most Endangered Historic Places due to climate change. BOHA partners have been working to find climate adaptive solutions to protect and sustain critical ecological and cultural resources on the islands. A range of coastal adaptation efforts are currently under consideration including increased shoreline armoring and nature-based adaptation solutions. Any action taken in the coastal zone will require an assessment of environmental and ecological communities that could potentially be impacted by disturbance caused by restoration or adaptation projects. The primary goals of the initial phase of this project were to: 1) synthesize occurrence and distribution records of biodiversity living in and using mixed coarse substrate habitats of the intertidal zone of the Boston Harbor Islands; and 2) identify and compile potential methods to develop a standard and repeatable monitoring protocol to track changes (natural or anthropogenic) in intertidal biodiversity over time and across locations; and 3) conduct preliminary site scoping of target islands to identify locations for collecting new baseline data. A biodiversity inventory list was compiled, showing a total of 451 unique species were observed in BOHA between 1861-2020. Of this list, 55 species (invertebrates: 47; algae: 8) were considered nonindigenous species; a watchlist was also developed to help BOHA partners identify potential future invaders that could colonize and impact intertidal communities due to ongoing climate change or disturbance events. Native species observed in BOHA were evaluated using existing conservation frameworks and climate vulnerability information to prioritize species at greatest risk from anthropogenic and environmental stressors for future actions. Lastly, site scoping activities during 2021 identified three types of sites for future intertidal monitoring initiatives: (1) sites with relatively high biodiversity and foundational species, (2) erosional sites near cultural areas of importance to NPS, and (3) sites with generic (common across islands) biodiversity. Overall results are anticipated to help the NPS and BOHA partners identify a suite of species and sites for future monitoring given anticipated adaptation projects and ongoing changes due to SLR, coastal storms and other stressors.

Massachusetts↗

Geological processes and sedimentation rates of wind-tidal flats, Laguna Madre, Texas

Coastal flats worldwide that are periodically exposed to arid climates and periodically flooded by marine waters are unique depositional environments because they receive sediments surficially and interstitially from both land and sea. The wind-tidal flats bordering Laguna Madre, Texas, which fit this unique category, are modified by eolian processes when subaerially exposed, and by wave and current processes when submerged. Floodwater is derived from the lagoon and driven onto the flats by strong and persistent winds during the passage of cold fronts and tropical cyclones. Low surface gradients of the flats prevent rapid drainage and promote seawater evaporation. The depositional products of these processes are interbedded and interlaminated sand, mud, marine shells, algal mats, and evaporites. This assemblage of sediments is geologically diagnostic evidence for intertidal marine deposition and the same assemblage of sediments have been reported for modern marginal-marine flats in the Middle East. The wind-tidal flat surface at Laguna Madre is constantly changing. However, the net effect of natural changes during the past century is either negligible or the changes occur at such a slow rate that they are almost imperceptible. Sediments are repeatedly added to and removed from the surface of the flats in minor increments and in different areas at different times. Preservation potential is enhanced at a particular site by the development of thick mats of blue-green algae. The 14 C ages of buried algal mats yield average long-term (centuries to millennia) sedimentation rates for the wind-tidal flats that range from 0.13 to 0.96 mm/yr and average 0.57 mm/yr. The 210 Pb profiles yield average short-term (150 yr) sedimentation rates that are an order of magnitude higher, ranging from 0.7 to 8.3 mm/yr and averaging 2.9 mm/yr. The minimum present rate of relative sea-level rise in Laguna Madre (3.4 mm/yr) exceeds the historical sedimentation rates for most of the flats. If future sea-level rise is faster than the rates of aggradation, then the wind-tidal flats will progressively become more frequently flooded and will eventually become permanently submerged.

Texas↗

Final report: A novel monitoring framework to assess intertidal biodiversity in mixed coarse substrate habitats across the Boston Harbor Islands

The Boston Harbor Islands National Recreation Area (BOHA) is at high risk to the impacts of sea-level rise (SLR) and erosion from coastal storms. In June 2021, the National Trust for Historic Preservation listed the islands as one of America’s 11 Most Endangered Historic Places due to climate change. BOHA partners have been working to find climate adaptive solutions to protect and sustain critical ecological and cultural resources on the islands. A range of coastal adaptation efforts are currently under consideration including increased shoreline armoring and nature-based adaptation solutions. Any action taken in the coastal zone will require an assessment of environmental and ecological communities that could potentially be impacted by disturbance caused by restoration or adaptation projects. The primary goals of the initial phase of this project were to: 1) synthesize occurrence and distribution records of biodiversity living in and using mixed coarse substrate habitats of the intertidal zone of the Boston Harbor Islands; and 2) identify and compile potential methods to develop a standard and repeatable monitoring protocol to track changes (natural or anthropogenic) in intertidal biodiversity over time and across locations; and 3) conduct preliminary site scoping of target islands to identify locations for collecting new baseline data. A biodiversity inventory list was compiled, showing a total of 451 unique species were observed in BOHA between 1861-2020. Of this list, 55 species (invertebrates: 47; algae: 8) were considered nonindigenous species; a watchlist was also developed to help BOHA partners identify potential future invaders that could colonize and impact intertidal communities due to ongoing climate change or disturbance events. Native species observed in BOHA were evaluated using existing conservation frameworks and climate vulnerability information to prioritize species at greatest risk from anthropogenic and environmental stressors for future actions. Lastly, site scoping activities during 2021 identified three types of sites for future intertidal monitoring initiatives: (1) sites with relatively high biodiversity and foundational species, (2) erosional sites near cultural areas of importance to NPS, and (3) sites with generic (common across islands) biodiversity. Overall results are anticipated to help the NPS and BOHA partners identify a suite of species and sites for future monitoring given anticipated adaptation projects and ongoing changes due to SLR, coastal storms and other stressors.

Massachusetts↗

Assessing habitat use and population dynamics of fisheries resources at Kaloko Fishpond

Throughout Hawai'i, fishponds are considered by their local communities as important cultural touchstones, a source of local, sustainably produced food, and an important component to the development of community-based management for nearshore fisheries. Within Kaloko-Honokōhau National Historical Park, the restoration of Kaloko Fishpond for traditional aquaculture management is a goal of both the National Park Service (NPS) and Hui Kaloko-Honokōhau, a community-based group of kia'i, i.e., caretakers and native Hawaiian cultural practitioners. However, existing data on the demographics and condition of the fish populations within the pond, and the fish-habitat quality are poor to non-existent. Therefore, the objectives of this study were to: catalog fish species composition and distribution in the pond; estimate the abundance of focal species/taxonomic groups; and evaluate the occupancy patterns of the invasive algae Acanthophora spicifera and Upside-down Jellyfish Cassiopea andromeda. As part of these objectives, a survey protocol and analysis framework were designed and evaluated to ensure that the NPS and community group would be able to refine and implement them to continue their monitoring efforts. We conducted dual-observer shore-based visual surveys multiple times per week during September-October 2020 and April-September 2022. A total of 41 species/taxonomic groups were recorded over the course of the surveys. The largest number of species/taxonomic groups were observed at survey stations located on or near the kuapā, or wall separating the fishpond from the ocean. N-mixture models fitted to the data estimated a total population of 353 – 392 mullets, 134 – 192 flagtails (āholehole), and 189 – 277 Milkfish (Awa) Chanos chanos occurring within the 1.2-ha portion of Kaloko Fishpond that could be surveyed visually from the shoreline. Multi-season occupancy models fitted to the surveyed presence of A. spicifera and Upside-down Jellyfish indicted sites throughout most of the pond exhibited moderate and consistent occupancy (ψ = 0.30 – 0.40) throughout much of the pond, except for the northeast corner of the pond (Kaloko Iki) where colonization rates were lower and extinction rates higher than other areas within Kaloko. The visual survey method developed for this study provides a low-cost and effective starting point for the development of methodology that can be used both by NPS personnel and volunteers from the community group. However, we were only able to estimate fish populations for approximately 24% of the area of Kaloko Fishpond with this method. Given that the deeper areas of Kaloko Fishpond are completely inaccessible to the visual survey method used, generating population estimates for the entire pond based on the parameters estimated in the current study is not recommended without further investigation into fish movement and habitat use. Various means to refine this protocol to better meet the needs and abilities of the NPS and community group are proposed.

Hawaii↗

Vessel surveys for marine birds in the Gulf of America (Gulf of Mexico): Protocol manual (2017–2025)

This manual provides contextual background and detailed instructions for survey procedures that were used to collect, enter, archive, and analyze digitally-entered field data collected for marine birds during three large-vessel survey projects in the northern Gulf of America (also Gulf of Mexico, hereafter “Gulf”). Projects using this protocol included the Gulf of Mexico Marine Assessment Program for Protected Species (GoMMAPPS: 2017-2018), the Vessel Surveys for Abundance and Distribution of Marine Mammals and Seabirds (VSAD: 2023-2024), and certain repositioning legs of the Atlantic Marine Assessment Program for Protected Species (AMAPPS: 2021, 2023). Based substantially on Ballance and Force (2011), the protocol used in the Gulf is based on a standardized 300 m wide strip transect using software architecture available in program SeeBird (v.4.3.7), a data collection program developed by Robert Holland at the National Oceanic and Atmospheric Administration (NOAA) Southwest Fisheries Science Center, La Jolla, CA. Survey protocols relied on the digital entering of standardized metadata linked to sightings of seabirds (e.g., species, number, location, distance bin, association[s], behavior, flight direction, flight height, angle from ship, age, sex, plumage, and optional comments) as well as other protected species. SeeBird has additional modules that may be used to input data on mixed-species seabird flocks and flying fish (only the latter was used in the Gulf). SeeBird includes “user-driven” commands issued through the keyboard, touch screen, and/or mouse, many of which are aided by drop-down menus that prompt the user options that are available for input. In addition, the program features “event–driven” inputs updated at intervals selected by the user, and that also record exact time and location of such edits. We describe how SeeBird was adapted in the Gulf both to run directly via serial connections from the ship’s navigation system and to operate independently from the ship through a satellite-derived GPS feed. This user manual also gives information about: procedures used to document flying fish abundance on Gulf surveys; how to use the Beaufort scale for standardizing wind force and sea state environmental conditions; how to make and use a hand-held rangefinder for delimiting strip transect bin distances; additional functionalities in SeeBird for which user guides are not available; file-naming, file-archiving, and file location conventions used on Gulf marine bird surveys; protocols used in the Gulf for describing relative abundance of the macro-alga Sargassum as an environmental covariate; the standardized four-letter taxa codes (summarized in a SpeciesCode.txt file) used in the Gulf for denoting species, other taxonomic, and event categories as inputs to SeeBird; an Excel example spreadsheet that has successfully imported SeeBird’s ASCII text file; procedural steps to import, edit, and archive into Excel ASCII text files from SeeBird; initialization instructions for starting up program SeeBird on a Panasonic ToughBook™ that relies on integrated, satellite-derived GPS, and for writing “S” (seabirds + other taxa) and “E” (flying fish) ASCII files to a folder or subfolder other than the default root location on the laptop that contains program SeeBird; how to trouble-shoot miscellaneous start-up problems with program SeeBird; how to add new four-letter codes (into a SpeciesCode.txt file) when additional taxa or objects of interest are encountered. The primary objective of this manual is to archive a permanent, replicable history of survey methodology to facilitate continuity with comparable future projects that may be conducted in the Gulf. A secondary objective is to describe why and how program SeeBird was applied and adapted specifically for operating in Gulf survey conditions. As of late 2025, user guides for software program SeeBird were no longer readily accessible, so this manual serves also to address that gap.

Northern Gulf of America↗

Diseases of amphibian eggs and embryos

Amphibians generally are prolific egg producers. In tropical and semi-tropical regions, deposition of eggs may occur year-round or may coincide with rainy seasons, while in temperate regions, deposition of eggs usually occurs immediately after emergence from hibernation. Numbers of eggs produced by each species may vary from a few dozen to thousands. Accordingly, some eggs may be infertile and wastage of embryos is to be expected. Fertility, viability and decomposition of eggs and embryos must be considered before it is assumed that diseases are present. An important consideration in the evaluation of egg masses is the fact that some will contain infertile and non-viable eggs. These infertile and nonviable eggs will undergo decomposition and they may appear similar to eggs that are infected by a pathogen. Evaluation of egg masses and embryos for the presence of disease may require repeated observations in a given breeding season as well as continued monitoring of egg masses during their growth and development and over successive breeding seasons. Amphibian eggs rarely are subjected to a comprehensive health (diagnostic) examination; hence, there is scant literature on the diseases of this life stage. Indeed, the eggs of some North American amphibians have yet to be described. Much basic physiology and normal biomedical baseline data on amphibian eggs is lacking. For example, it is known that the aquatic eggs of some species of shrimp quickly are coated by a protective and commensal bacterium that effectively impedes invasion of the eggs by other environmental organisms and potential pathogens. In the absence of this bacterium, shrimp eggs are rapidly killed by other bacteria and fungi (Green, 2001). The possibility that amphibian eggs also have important symbiotic or commensal bacteria needs to be investigated. Furthermore, the quantity and types of chemicals in the normal gelatinous capsules of amphibian eggs have scarcely been examined. Abnormalities of the female oviduct, either due to infectious disease, nutritional status, hormonal imbalances, or sublethal intoxications, could affect the quality of secreted gelatinous capsules on eggs, thus rendering an egg mass susceptible to other stressors. Diseases of amphibian eggs and embryos presented in this chapter are Lucke frog herpesvirus Ranavirus (iridovirus) infection Bacteria Watermold infection (saprolegniasis) Algae Microsporidia

Book chapter↗

Land use patterns, ecoregion, and microcystin relationships in U.S. lakes and reservoirs: a preliminary evaluation

A statistically significant association was found between the concentration of total microcystin, a common class of cyanotoxins, in surface waters of lakes and reservoirs in the continental U.S. with watershed land use using data from 1156 water bodies sampled between May and October 2007 as part of the USEPA National Lakes Assessment. Nearly two thirds (65.8%) of the samples with microcystin concentrations ≥1.0 μg/L (n = 126) were limited to three nutrient and water quality-based ecoregions (Corn Belt and Northern Great Plains, Mostly Glaciated Dairy Region, South Central Cultivated Great Plains) in watersheds with strong agricultural influence. canonical correlation analysis (CCA) indicated that both microcystin concentrations and cyanobacteria abundance were positively correlated with total nitrogen, dissolved organic carbon, and temperature; correlations with total phosphorus and water clarity were not as strong. This study supports a number of regional lake studies that suggest that land use practices are related to cyanobacteria abundance, and extends the potential impacts of agricultural land use in watersheds to include the production of cyanotoxins in lakes.

Harmful Algae↗

Cyanotoxins in inland lakes of the United States: Occurrence and potential recreational health risks in the EPA National Lakes Assessment 2007

A large nation-wide survey of cyanotoxins (1161 lakes) in the United States (U.S.) was conducted during the EPA National Lakes Assessment 2007. Cyanotoxin data were compared with cyanobacteria abundance- and chlorophyll-based World Health Organization (WHO) thresholds and mouse toxicity data to evaluate potential recreational risks. Cylindrospermopsins, microcystins, and saxitoxins were detected (ELISA) in 4.0, 32, and 7.7% of samples with mean concentrations of 0.56, 3.0, and 0.061 mg/L, respectively (detections only). Co-occurrence of the three cyanotoxin classes was rare (0.32%) when at least one toxin was detected. Cyanobacteria were present and dominant in 98 and 76% of samples, respectively. Potential anatoxin-, cylindrospermopsin-, microcystin-, and saxitoxin-producing cyanobacteria occurred in 81, 67, 95, and 79% of samples, respectively. Anatoxin-a and nodularin-R were detected (LC/MS/MS) in 15 and 3.7% samples (n = 27). The WHO moderate and high risk thresholds for microcystins, cyanobacteria abundance, and total chlorophyll were exceeded in 1.1, 27, and 44% of samples, respectively. Complete agreement by all three WHO microcystin metrics occurred in 27% of samples. This suggests that WHO microcystin metrics based on total chlorophyll and cyanobacterial abundance can overestimate microcystin risk when compared to WHO microcystin thresholds. The lack of parity among the WHO thresholds was expected since chlorophyll is common amongst all phytoplankton and not all cyanobacteria produce microcystins.

Harmful Algae↗

Estimating microcystin levels at recreational sites in western Lake Erie and Ohio

Cyanobacterial harmful algal blooms (cyanoHABs) and associated toxins, such as microcystin, are a major global water-quality issue. Water-resource managers need tools to quickly predict when and where toxin-producing cyanoHABs will occur. This could be done by using site-specific models that estimate the potential for elevated toxin concentrations that cause public health concerns. With this study, samples were collected at three Ohio lakes to identify environmental and water-quality factors to develop linear-regression models to estimate microcystin levels. Measures of the algal community (phycocyanin, cyanobacterial biovolume, and cyanobacterial gene concentrations) and pH were most strongly correlated with microcystin concentrations. Cyanobacterial genes were quantified for general cyanobacteria, general Microcystis and Dolichospermum , and for microcystin synthetase ( mcyE ) for Microcystis , Dolichospermum , and Planktothrix. For phycocyanin, the relations were different between sites and were different between hand-held measurements on-site and nearby continuous monitor measurements for the same site. Continuous measurements of parameters such as phycocyanin, pH, and temperature over multiple days showed the highest correlations to microcystin concentrations. The development of models with high R 2 values (0.81–0.90), sensitivities (92%), and specificities (100%) for estimating microcystin concentrations above or below the Ohio Recreational Public Health Advisory level of 6 μg L −1 was demonstrated for one site; these statistics may change as more data are collected in subsequent years. This study showed that models could be developed for estimates of exceeding a microcystin threshold concentration at a recreational freshwater lake site, with potential to expand their use to provide relevant public health information to water resource managers and the public for both recreational and drinking waters.

Ohio↗

A method for examining temporal changes in cyanobacterial harmful algal bloom spatial extent using satellite remote sensing

Cyanobacterial harmful algal blooms (CyanoHAB) are thought to be increasing globally over the past few decades, but relatively little quantitative information is available about the spatial extent of blooms. Satellite remote sensing provides a potential technology for identifying cyanoHABs in multiple water bodies and across geo-political boundaries. An assessment method was developed using MEdium Resolution Imaging Spectrometer (MERIS) imagery to quantify cyanoHAB surface area extent, transferable to different spatial areas, in Florida, Ohio, and California for the test period of 2008 to 2012. Temporal assessment was used to evaluate changes in satellite resolvable inland waterbodies for each state of interest. To further assess cyanoHAB risk within the states, the World Health Organization’s (WHO) recreational guidance level thresholds were used to categorize surface area of cyanoHABs into three risk categories: low, moderate, and high-risk bloom area. Results showed that in Florida, the area of cyanoHABs increased largely due to observed increases in high-risk bloom area. California exhibited a slight decrease in cyanoHAB extent, primarily attributed to decreases in Northern California. In Ohio (excluding Lake Erie), little change in cyanoHAB surface area was observed. This study uses satellite remote sensing to quantify changes in inland cyanoHAB surface area across numerous water bodies within an entire state. The temporal assessment method developed here will be relevant into the future as it is transferable to the Ocean Land Colour Instrument (OLCI) on Sentinel-3A/3B missions.

California, Florida, Ohio↗

Consortial brown tide − picocyanobacteria blooms in Guantánamo Bay, Cuba

A brown tide bloom of Aureoumbra lagunensis developed in Guantánamo Bay, Cuba during a period of drought in 2013 that followed heavy winds and rainfall from Hurricane Sandy in late October 2012. Based on satellite images and water turbidity measurements, the bloom appeared to initiate in January 2013. The causative species ( A. lagunensis ) was confirmed by microscopic observation, and pigment and genetic analyses of bloom samples collected on May 28 of that year. During that time, A. lagunensis reached concentrations of 900,000 cells ml −1 (28 ppm by biovolume) in the middle portion of the Bay. Samples could not be collected from the northern (Cuban) half of the Bay because of political considerations. Subsequent sampling of the southern half of the Bay in November 2013, April 2014, and October 2014 showed persistent lower concentrations of A. lagunensis , with dominance shifting to the cyanobacterium Synechococcus (up to 33 ppm in April), an algal group that comprised a minor bloom component on May 28. Thus, unlike the brown tide bloom in Laguna Madre, which lasted 8 years, the bloom in Guantánamo Bay was short-lived, much like recent blooms in the Indian River, Florida. Although hypersaline conditions have been linked to brown tide development in the lagoons of Texas and Florida, observed euhaline conditions in Guantánamo Bay (salinity 35–36) indicate that strong hypersalinity is not a requirement for A. lagunensis bloom formation. Microzooplankton biomass dominated by ciliates was high during the observed peak of the brown tide, and ciliate abundance was high compared to other systems not impacted by brown tide. Preferential grazing by zooplankton on non-brown tide species, as shown in A. lagunensis blooms in Texas and Florida, may have been a factor in the development of the Cuban brown tide bloom. However, subsequent selection of microzooplankton capable of utilizing A. lagunensis as a primary food source may have contributed to the short-lived duration of the brown tide bloom in Guantánamo Bay.

Guantánamo Bay↗

Blurred lines: Multiple freshwater and marine algal toxins at the land-sea interface of San Francisco Bay, California

San Francisco Bay (SFB) is a eutrophic estuary that harbors both freshwater and marine toxigenic organisms that are responsible for harmful algal blooms. While there are few commercial fishery harvests within SFB, recreational and subsistence harvesting for shellfish is common. Coastal shellfish are monitored for domoic acid and paralytic shellfish toxins (PSTs), but within SFB there is no routine monitoring for either toxin. Dinophysis shellfish toxins (DSTs) and freshwater microcystins are also present within SFB, but not routinely monitored. Acute exposure to any of these toxin groups has severe consequences for marine organisms and humans, but chronic exposure to sub-lethal doses, or synergistic effects from multiple toxins, are poorly understood and rarely addressed. This study documents the occurrence of domoic acid and microcystins in SFB from 2011 to 2016, and identifies domoic acid, microcystins, DSTs, and PSTs in marine mussels within SFB in 2012, 2014, and 2015. At least one toxin was detected in 99% of mussel samples, and all four toxin suites were identified in 37% of mussels. The presence of these toxins in marine mussels indicates that wildlife and humans who consume them are exposed to toxins at both sub-lethal and acute levels. As such, there are potential deleterious impacts for marine organisms and humans and these effects are unlikely to be documented. These results demonstrate the need for regular monitoring of marine and freshwater toxins in SFB, and suggest that co-occurrence of multiple toxins is a potential threat in other ecosystems where freshwater and seawater mix.

California↗

Effects of harmful algal blooms and associated water-quality on endangered Lost River and shortnose suckers

Anthropogenic eutrophication contributes to harmful blooms of cyanobacteria in freshwater ecosystems worldwide. In Upper Klamath Lake, Oregon, massive blooms of Aphanizomenon flos-aquae and smaller blooms of other cyanobacteria are associated with cyanotoxins, hypoxia, high pH, high concentrations of ammonia, and potentially hypercapnia. Recovery of the endangered Lost River sucker Deltistes luxatus and shortnose sucker Chasmistes brevirostris in Upper Klamath Lake is obstructed by low survival in the juvenile life stage. Water quality associated with the harmful algal blooms and their decomposition (crashes) is often singled out as the primary cause of juvenile sucker mortality. We investigated this general hypothesis with a review of relevant literature and data from decades of monitoring in Upper Klamath Lake. Microcystins, hepatotoxins produced by some cyanobacteria, are unlikely to be directly lethal to suckers; potential effects of other cyanotoxins that are present in the lake warrant investigation. Dissolved-oxygen saturation declined following bloom crashes, but was infrequently low enough for long enough in Upper Klamath Lake to cause direct sucker mortality. Hypercapnia could potentially reach lethal concentrations in the fall and winter, but did not appear to be associated with the summer algal blooms. pH was highest during peaks in cyanobacteria growth, but infrequently reached directly lethal levels (> 10.3). However, pH frequently reached an observed sub-lethal effect level for juvenile suckers (10.0). Un-ionized ammonia rarely exceeded even the lowest effect level measured for suckers. Rather than act as a direct cause of large-scale mortality, the available evidence suggests that water quality associated with massive blooms of cyanobacteria in Upper Klamath Lake contributes to chronic stress for juvenile suckers and may increase mortality due to other factors.

Oregon↗