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USGS2026

High-resolution transboundary vegetation community maps of the Sonoran and Mojave Desert ecoregion to support critical landscape conservation planning and habitat management needs

We produced a 30-m resolution binational land cover map of Bird Conservation Region 33 (BCR 33) for the U.S. North American Bird Conservation Initiative. The region covers large portions of the Sonoran and Mojave Deserts. The map can support the U.S. Fish and Wildlife Service (FWS) Migratory Bird Program’s recovery planning efforts and constitutes the first known binational land cover dataset spanning sections of the United States–Mexico border and using a consistent classification system for both countries. The mapped region includes 152 distinct land cover classes, covering a total area of 38,421,453 ha (148,345 mi 2 ), of which 13,148,345 ha (52,706 mi 2 ) are located in Mexico and 24,770,640 ha (95,639 mi 2 ) in the United States. We primarily used Landsat 8 (OLI) imagery, supplemented by limited ground surveys from two field campaigns, drone-based aerial data, and existing vegetation classification frameworks from both countries. The classification applied a data-fusion approach integrating 30-m Landsat 8 imagery, decadal phenology metrics from vegetation indices, and a random forest model trained mainly with datasets from a comprehensive national mapping project from the U.S. Geological Survey (USGS) GAP Analysis Project (GAP) and federal wildland fire agencies’ Landscape Fire and Resource Management Planning Tools (LANDFIRE) (GAP/LANDFIRE) [United States side] and the National Institute of Statistics and Geography (INEGI) [Mexico side] as well as land cover maps and opportunistic open-access and field observations. Mapping of the full BCR 33 region was carried out in two phases: 1) Phase I, the prototype map, covered a smaller portion of the transboundary area and identified 31 land cover classes, and 2) Phase II, the full BCR 33 map (refer to Figure 1), which resulted in 152 land cover classes. Using a Random Forest classifier, we achieved an overall prediction accuracy of 92% for the Phase I map and 87% for the Phase II full region map. This slight decrease can be attributed to working on a larger, more complex area with a greater number of land cover classes. No formal validation was conducted, aside from using a subset of the collected field observations and training data to assess model performance during and after training. The training sites were further verified using Google Earth (Google, 2026) imagery. Two undergraduate students who worked for over a year visually inspected imagery and open access public images to confirm each training site during model training using in-house developed, online, visual tools. A portion of this field training data was reserved for model validation, and the corresponding results are to be presented in later sections. The project developed an end-to-end, medium- and fine-resolution remote sensing–based data fusion mapping approach. This effort produced a map (Nagler et al., 2025) and the online tools to support a dynamic, live, online map for visualizing the transboundary vegetation communities in BCR 33. The toolset is currently hosted by the University of Arizona (UofA) Vegetation Index and Phenology (VIP) Lab to support FWS partners (https://vip.arizona.edu/viplab_data_explorer?LCM_BCR33). The online map is designed to allow rapid updates using new training, validation, or correction data, making it dynamic and maintainable. The approach we took established a framework for rapid updating and correction of land cover maps, as the model can be quickly retrained with new field observations, updated training data, or other sources. This enables dynamic mapping and change detection of the region’s vegetation. This framework is an advance in data fusion and crowdsourced mapping of complex, vulnerable regions, providing support to regional stakeholders and the wider user community. This transboundary map can inform the protection, conservation, and restoration of vegetation, habitat, and ecosystems, particularly for threatened and endangered species across the two nations using consistent and harmonized binational mapping systems. Beyond supporting land management decisions and stakeholders in the transboundary desert ecoregions, this BCR 33 mapping effort establishes a foundation for future rapid, low-cost, cross-border land cover mapping that can benefit and advance ecosystem management.

Arizona, Baja California, California, Nevada, Sina↗
USGS2026

Age and colony variation in Adélie penguin metapopulation vital rates: Insights from a 25-year mark–recapture study

Understanding how vital rates vary with age, life-history stage, and among populations is fundamental for predicting the demographic consequences of environmental change, especially in longer-lived species with complex life histories. These species often exhibit delayed maturity and iteroparity, making nuanced demographic insights critical for assessing their long-term viability. This study investigated age- and colony-related variation in Adélie penguin vital rates including survival, recruitment, and breeding propensity. We used mark–recapture data collected over 25 years (1996–2020) from three Adélie penguin breeding colonies that differed in population sizes and trends but comprised a metapopulation located at capes Royds, Bird, and Crozier on Ross Island, Antarctica. We used multi-state models to estimate survival and detection rates relative to reproductive state and breeding colony and estimated transition probabilities reflecting movements between reproductive states and colonies. Apparent survival varied by reproductive state, colony, and age and averaged 0.80 (SD = 0.02) at Bird, and 0.72 (SD = 0.03) and 0.73 (SD = 0.03) at Crozier and Royds, respectively, for pre-breeders age 2–7 years with strong declines in pre-breeder survival after age 8. We observed less age-related variation in survival of breeders and non-breeders, but we observed differences between colonies with lower survival for breeders (0.72 to 0.80) compared to non-breeders (0.75 to 0.82). The average probability of surviving the first 2 years after fledging ranged from 0.43 (SD = 0.14) at Royds and Crozier (0.43, SD = 0.10) to 0.55 (SD = 0.15) at Bird. Movement between colonies was highest for pre-breeders (0.00%–12.00% depending on age and colony) and lowest for breeders (<0.20%). We observed the lowest age-related recruitment rates at Royds, with recruitment at Crozier almost twice as high, and intermediate at Bird. Breeding propensity was highest at Crozier and lowest at Bird. Colony-specific variation in vital rates likely contributed differently to population trajectories, suggesting that care must be taken to extrapolate vital rate estimates across colonies even within a metapopulation. These findings also highlight the importance of considering age, life-history stage, and geographic variation when assessing population vital rates in species with complex life histories.

Frontiers in Ecology and Environment↗
USGS2025

Comparisons of shoreline positions from satellite-derived and traditional field- and remote-sensing techniques

Satellite-derived shorelines (SDS) have the potential to help researchers answer critical coastal science questions and support work to predict coastal change by filling in the spatial and temporal gaps present in current field-based and remote-sensing data collection methods. The U.S. Geological Survey conducted comparison analyses of traditionally sourced shorelines and SDS in diverse coastal landscapes to determine how SDS could be used in ongoing and future work across varied coastal environments and provided some initial findings that could be used for implementation. Using CoastSeg, a browser-based program for SDS detection and mapping, SDS for the period 1984–2023 for multiple locations across the United States were compared to shoreline positions from traditionally sourced shoreline data. In this report, the authors present these comparisons alongside lessons learned and challenges encountered when building SDS workflows in different coastal locations. Results show that individual SDS have larger uncertainty and yet produced similar linear trends to sparser, traditionally sourced shoreline data; because SDS methods provide orders of magnitude more data than traditional shoreline-detection methods, they can be used to evaluate shoreline behaviors. Refining average scalar slopes used in tidal corrections did not result in substantial decreases in uncertainty. Using lessons from this work to outline needs for regional implementation, initial setup time would be considerable, being on the order of weeks. However, once complete, shoreline detections and analyses are fast (on the order of minutes to hours) and achievable using a desktop computer.

Alaska, Florida, Massachusetts, Washington↗
USGS2024

Seismicity zoning at Coso geothermal field and stress changes from fluid production and migration

The Coso geothermal field is a major geothermal power production site in the western United States. It has been observed that low-magnitude seismic events ( M < 3.71) are unevenly distributed in three distinct zones, namely, nearfield (<3 km), midfield (3–6 km), and farfield (> 6 km) from the Coso geothermal plant. These zones exhibit distinct changes in earthquake location before and during geothermal production episodes that began in 1986. After 1986, the midfield region of the main flank experiences a significantly lower seismicity rate than the surrounding areas before production episodes. During 2014–2019, the farfield earthquakes cluster in the eastern and western parts of the greater Coso area, which is discernably different from how those pre-production earthquake events were distributed along the conjugate NW-SE and SW-NW trending structures across the main flank. Here, we analyze the stage of stress with finite-element-based poroelastic simulations to illustrate how the spatiotemporal evolution of the seismicity is associated with the pattern of stress perturbations caused by fluid migration amid the operations of geothermal power plants. Generally, ∼70% of co-production seismicity is found in zones of increased Coulomb stress between 2014 and 2019 at >99% confidence. Meanwhile, the midfield zone of seismic paucity overlaps with the zone of decreasing pore-fluid pressure. Overall, the results provide a physical explanation of how decadal geothermal operations at Coso have perturbed stress-field changes and contributed to the evolving characteristic seismic pattern, shedding insights into assessing the seismic hazard in other geothermal settings.

California↗
USGS2025

Decomposing the Tea Bag Index and finding slower organic matter loss rates at higher elevations and deeper soil horizons in a minerogenic salt marsh

Environmental gradients can affect organic matter decay within and across wetlands and contribute to spatial heterogeneity in soil carbon stocks. We tested the sensitivity of decay rates to tidal flooding and soil depth in a minerogenic salt marsh using the Tea Bag Index (TBI). Tea bags were buried at 10 and 50 cm depths across an elevation gradient in a subtropical Spartina alterniflora marsh in Georgia (USA). Plant and animal communities and soil properties were characterized once, while replicate tea bags and porewaters were collected several times over 1 year. TBI decay rates were faster than prior litterbag studies in the same marsh, largely due to rapid green tea loss. Rooibos tea decay rates were more comparable to natural marsh litter, potentially suggesting that is more useful as a standardized organic matter proxy than green tea. Decay was slowest at higher marsh elevations and not consistently related to other biotic (e.g., plants, crab burrows) or abiotic factors (e.g., porewater chemistry), indicating that local hydrology strongly affected organic matter loss rates. TBI rates were 32 %–118 % faster in the 10 cm horizon than at 50 cm. Rates were fastest in the first 3 months and slowed 54 %–60 % at both depths between 3 and 6 months. Rates slowed further between 6 and 12 months, but this was more muted at 10 cm (17 %) compared to 50 cm (50 %). Slower rates at depth and with time were unlikely due to the TBI stabilization factor, which was similar across depths and decreased from 6 to 12 months. Slower decay at 50 cm demonstrates that rates were constrained by environmental conditions in the deeper horizon rather than the composition of this highly standardized litter. Overall, these patterns suggest that hydrological setting, which affects oxidant introduction and reactant removal and is often overlooked in marsh decomposition studies, may be a particularly important control on organic matter loss in the short term (3–12 months).

Georgia↗
USGS2022

South Carolina and Landsat

South Carolina, the eighth State admitted to the union, transcends its size with its deep, rich history; striking beauty; vast natural resources; and extensive cultural diversity. Home to part of the Blue Ridge Mountains of the Central Appalachians, the Upstate is graced with more than 100 waterfalls, while the Lowcountry borders the Atlantic Ocean with 187 miles of coastline and 35 barrier islands. Forests cover two-thirds of the State, and forestry and agriculture together, as agribusiness, make up South Carolina’s leading industry. Two historic crops—cotton and tobacco—still rank in the top 10 commodities, though corn and soybeans now rank higher. Poultry, cattle, peanuts, and flowers also make the list. South Carolina’s population totals more than five million. Other residents include a variety of wildlife, bird, reptile, and fish species, including Ursus americanus (black bears), Alligator mississippiensis (American alligators), and Tursiops truncatus (bottlenose dolphins). More than 100 tree species also reside in South Carolina, which pays homage to one with its “The Palmetto State” nickname. South Carolina’s subtropical climate, long coastline, and lower elevations make it highly susceptible to tornado and hurricane activity and coastal flooding. Projected sea-level rise is a growing concern. A view from space can help monitor and manage natural resources on the land and in rivers, marshes, and the coast. Landsat reveals not just what an area looks like now, but also insights from decades ago.

South Carolina↗
USGS2026

2025 USGS National Seismic Hazard Model for Puerto Rico and the U.S. Virgin Islands: Overview of model and hazard results

The U.S. Geological Survey recently updated the National Seismic Hazard Model (NSHM) for Puerto Rico and the U.S. Virgin Islands (PRVI). The first version of the PRVI NSHM was released in 2003, and therefore this 2025 update includes over 20 years of new geologic, geophysical, and engineering data, methods, and models. Updates follow similar efforts performed in the recent 2023 50-state NSHM. However, this is the first NSHM in which we: (1) apply an inversion methodology to subduction interface fault sources in the earthquake rupture forecast (ERF) model; (2) develop scaled backbone median ground-motion models and independent aleatory variability models that are applied in the ground-motion characterization (GMC) model; and (3) calculate epistemic uncertainty related to alternative scenarios in the ERF and GMC models for all grid points in the study region. Long-term time-independent mean hazard calculations were performed for peak ground acceleration and 5%-damped pseudospectral acceleration at 21 spectral periods from 0.01- to 10.0-s, for eight National Earthquake Hazards Reduction Program site conditions ranging from V S30 = 150 to 1500 m/s, and for 2%, 5%, and 10% in 50-year probabilities of exceedance (return periods of 2475, 975, and 475 years, respectively). Epistemic uncertainty, in the form of selected percentiles, is also provided for a suite of test sites and all grid points in the study region for limited periods, site conditions, and probabilities of exceedance. Selected results, including comparisons with the 2003 PRVI NSHM, are shown and discussed for selected periods, site conditions, and probabilities of exceedance. When comparing the 2025 PRVI NSHM with the 2003 PRVI NSHM, hazard is generally higher at shorter periods and lower at longer periods, as a result of updates in both ERF and GMC models. The 2025 PRVI NSHM is applicable for return periods greater than ∼475 or less than ∼10,000 years.

Puerto Rico, U.S. Virgin Islands↗
USGS2024

Apatite and monazite geochemistry record magmatic and metasomatic processes in rare earth element mineralization at Mountain Pass, California

The largest rare earth element (REE) deposit in the United States is a carbonatite intrusion at Mountain Pass in the Mojave Desert, California. Despite a clear spatiotemporal association of alkaline silicate and carbonatite intrusions at Mountain Pass, a genetic model of their mutual formation has not been resolved. The Mountain Pass carbonatite has long been upheld as an example of a primary magmatic body, but recent work has suggested it could be fluid-derived. This study investigates the geochemistry of apatite and monazite grains from the alkaline silicate and carbonatite stocks and dikes of the Mountain Pass district, to elucidate the magmatic history of the intrusive suite and identify the role of fluids in rare earth element mineralization. Three apatite populations are identified in the alkaline silicate rocks. A primary magmatic apatite group supports intrusion of the stocks as separate pulses of magma derived from a spatially extensive metasomatized mantle source region. The second group implicates the role of a regional fluid that mobilized light rare earth elements from apatite grains. A minor group of inherited apatite cores, identified by low Sr and negative Eu anomalies, supports assimilation of crustal material in the formation of the intrusive suite. Analyses of monazite and apatite grains from the carbonatite orebody also reveal a mix of primary magmatic and metasomatic (fluid-related) minerals. Compositional similarities between primary phosphates in the carbonatite and alkaline silicate rocks support a genetic link between the intrusive suites. The presence of fluids regionally and within the carbonatite orebody indicates the Mountain Pass carbonatite should not be classified as a purely magmatic REE deposit.

Arizona, California, Nevada↗
USGS2026

Variability and consistency in wildfire susceptibility: Insights from a national compilation

Background Wildfire risk in the United States is rising and remains a land management priority. The quantitative wildfire risk assessment (QWRA) framework integrates fuels, topography, weather and values at risk to estimate the potential change in value from wildfire. Within this, response functions (RFs) represent how values respond to fire intensity. These are often based on expert judgment, but variation across assessments is unclear. Aims This study uses data from the US Geological Survey (USGS) Wildfire Hazard and Risk Assessment Clearinghouse to characterize consistency and variation across categories and contexts. Methods We applied descriptive statistics to summarize RFs, using tables, box-and-whisker plots and heat maps stratified by highly valued resource or asset (HVRA) category and spatial scale. Key results RFs and value definitions vary, especially for ecosystem-related resources. Some functions, such as for buildings in the wildland–urban interface (WUI), translate well across contexts, while others require more input. Conclusions Some functions are broadly transferable, while others need customization. This analysis provides references and starting points for improvement to RFs in QWRAs. Interpretations Expanding the clearinghouse and dataset and building more transparency in expert elicitation can build trust among communities, agencies and end-users, and can support efficient use of limited resources to mitigate wildfire risk.

International Journal of Wildland Fire↗
USGS2023

The Saudi Geological Survey-U.S. Geological Survey northern Harrat Rahat project—Styles, rates, causes, and hazards of volcanism near Al Madīnah al Munawwarah, Kingdom of Saudi Arabia

Active volcanic systems pose serious hazards to people and property including inundation and incineration by lava, blanketing by tephra (volcanic ash), exposure to noxious volcanic gases, and damage from shallow earthquakes triggered by ascending molten material (magma). To improve understanding of volcanism and associated seismicity on the western Arabia Plate, the Saudi Geological Survey and the U.S. Geological Survey conducted a multi-year investigation of the northern Harrat Rahat volcanic field adjacent to the city of Al Madīnah al Munawwarah, Kingdom of Saudi Arabia. Project components included creation of a high-resolution digital topographic base; interpretation of eruptive history supported by detailed geologic mapping, paleomagnetism, and abundant high-precision geochronology of volcanic deposits; assessments of eruptive styles and volcanic hazards by physical volcanology; investigation of the origins of magmas in the mantle and of their differentiation in the crust revealed by chemical and isotopic petrology; gravity and magnetotelluric surveys to reveal crustal structures and to search for magma reservoirs; and regional and local seismic tomography and analyses of seismic hazards. Project results are presented in this Professional Paper as chapters written for technical scientific audiences. This initial chapter introduces the project and briefly summarizes results in plain language for readers who have more general backgrounds.

Al Madīnah al Munawwarah↗
USGS2024

3-D mapping of the conterminous U.S. within the USGS National Cooperative Geologic Mapping Program: Progress and future prospects

The U.S. Geological Survey (USGS) National Cooperative Mapping Program (NCGMP) is bringing together subsurface and three-dimensional information at multiple scales for the conterminous United States from data produced throughout the USGS and by federal and state partners. Components of this work include data inventory and catalog development, data integration and database development, and construction of subregional and basin-scale three-dimensional (3-D) geologic models. At small scales, the NCGMP is compiling subsurface data to create a limited number of subsurface layers that map the majority of the lower 48 States. At larger scales, 3-D models of stratigraphic units are intended to be the subsurface analog and extension of the surface geologic maps made within the Program. The Mapping Program is developing methods of storing, visualizing, and distributing 3-D models and subsurface data from multiple sources in easily shareable, queryable, non-proprietary format(s). We report on progress in 3-D mapping of the conterminous U.S. and on future prospects.

conterminous United States↗
USGS2026

Generating geochemical and mineralogy distributions of soil in the conterminous United States using Bayesian hierarchical spatial models

Characterizing geochemical and mineralogical soil distributions across large spatial extents is essential for understanding mineral resources, ecosystem processes, and environmental risks. Rasters of soil geochemical distributions for the conterminous United States, however, are limited. We present a Bayesian modeling workflow and tool for generating predictive geochemical and mineralogy distribution maps for the conterminous United States using integrated nested Laplace approximation (INLA) with the stochastic partial differential equation approach. By modeling soil geostatistical data with environmental covariates (soil properties, topography, climate, and land cover), we generate predictive distributions of soil geochemistry that can be mapped or extracted for further analyses. As an example, we model the spatial distribution of trace elements in soil relevant to vertebrate health (cobalt, copper, iron, manganese, selenium, and zinc) and provide a workflow that can be used to generate and visualize predictive distributions of 39 other major and trace elements and 21 minerals of the soil survey, supporting a variety of ecological, environmental, and agricultural applications.

MethodsX↗
USGS2024

Thick- and thin-skinned contractional styles and the tectonic evolution of the northern Sangre de Cristo Mountains, Colorado, USA

The Sangre de Cristo Mountains of southern Colorado and northern New Mexico, USA, contain an unusual combination of thick- and thin-skinned contractional structures involving both basement and cover rocks in the Laramide Rocky Mountain foreland. These structures are truncated by down-faulted extensional basins to the east and west. Together with synorogenic sediments, these structures preserve a record of the rise of the Ancestral Rocky Mountains, the Laramide orogeny, and Rio Grande rifting. Laramide structures within the mountains provide clues to processes that link the three events and to necessary conditions for thin-skinned and thick-skinned contractional structures to form together in continental interiors. To examine the full variety of structural styles, a portion of the northern Sangre de Cristo fold- and-thrust belt in Colorado was described and interpreted using geologic maps and structural cross-sections. Stratigraphic relations of the Ancestral Rocky Mountain highlands and basin fill were reconstructed from existing maps. These relations allow identification of faults inherited from the Ancestral Rocky Mountains, differentiation of thrust sheets, and in some cases, estimation of the magnitude of displacement. To examine relations between Laramide thrusts and Rio Grande rifting, kinematic data were collected from a thrust fault adjacent to rift faults. Three thrust fault styles were recognized: thin-skinned basement, thin-skinned cover rocks, and thick-skinned basement. Thin-skinned thrusts arising from a hinterland beneath the present San Luis Valley carried sheets of Proterozoic basement rocks northeast over a Laramide foreland. These basement thrusts are interpreted to be faults of the Ancestral Rocky Mountains that reactivated during the Laramide orogeny. The Laramide foreland consists of thin-skinned thrusts and folds in sedimentary cover rocks as young as 49 Ma. Both thin-skinned thrusts in basement and cover rocks are bounded by thick-skinned basement thrusts that moved intermittently throughout the Laramide orogeny. We infer that thin-skinned thrusts form in continental interiors where deformation is focused in weak strata of thick basin fill and in fluid-reaction weakened preexisting faults in basement rocks. Both conditions are met in the Sangre de Cristo Mountains. Basement thrusts adjacent to the San Luis Valley contain evidence of plastic contractional microstructures overprinted by extensional microstructures that may record the transition from Laramide contraction to Rio Grande extension of the crust.

Colorado↗
USGS2026

The mineral chemistry networks of tin and tungsten reflect metallogenic eras of the Mesozoic

Continental remobilization is a crucial driver of metallogenesis and the formation of ore deposits. Some of the world’s largest mineral deposits of the economically valuable elements tin (Sn), tungsten (W), gold (Au), copper (Cu), lead (Pb), and zinc (Zn) formed during the Mesozoic Era. Additionally, the chemistry and distribution of the elements Sn and W have been investigated in previous studies to understand planetary formation and differentiation processes. These two elements are largely co-located during certain South China Mesozoic metallogenic events but are not co-located during other time periods in the same regions. Here, we investigated the mineral chemistry network similarities and dissimilarities of Sn and W to understand their mineral formation and distribution during the Mesozoic Era and throughout Earth history. Mineral chemistry network community detection analysis and electronegativity associations among mineral constituent elements of Sn minerals and W minerals indicate that the elements have similar chemistry among their oxide minerals. However, Sn forms a much wider range of minerals that also contain S compared to W, which occurs in a limited number of S-containing minerals. The divergent constituent element interactions among S-containing Sn minerals and W minerals reflect the redox sensitivity and importance of oxygen (O) fugacity in Sn mineral formation. Conversely, extensive W mineral deposits are known to form at both high and low O fugacities. The similarities and differences between the mineral chemistry networks of Sn and W reflect the mineral distribution of the two elements in the Sn-W mineralization event from 160 to 139 Ma vs. the Sn–uranium (U) mineralization event from 125 to 98 million years ago (Ma). The mineral chemistry and distribution of Mesozoic Sn and W deposits illustrate the contrasting importance of redox and O fugacity on the mineral formation of different elements, and the dynamic crustal evolution that took place during this period of Earth history.

Geosciences↗
USGS2024

A journey to the center of the USGS National Strong-motion Project processing and beyond

The United States Geological Survey (USGS) National Strong Motion Project (NSMP) has the primary U.S. government responsibility to acquire, process, and disseminate significant strong-motion earthquake ground motion records measured at surficial free-field stations, structures (buildings, dams, and bridges, and geotechnical arrays to the earthquake engineering community. As a result of the deployment of modern seismic instrumentation and growth of tools such as web-services, earthquake data from U.S. and international seismic networks are more accessible than ever. Our mission is to provide raw and processed strong-motion waveforms with PGA values greater than 0.1%g for M3.0 earthquakes and larger in California and M4.0 and larger within the conterminous US, Hawaii, Puerto Rico, and Alaska. Datasets of interest to the engineering and geophysics communities, such as event sequences in areas of induced seismicity and significant global events, are also processed and posted at the Center for Engineering Strong Motion Data (CESMD) at strongmotioncenter.org when available through collaboration with the international strong-motion data community. Here we outline (1) the NSMP’s current workflow to acquire, process, and distribute data at CESMD; (2) our new endeavours and collaborations focusing on comparison and integration of waveform processing software, development of techniques for metadata quality checks before and after earthquakes, and construction of a dynamic site characterization repository; and (3) our topics for possible collaboration topics across the global strong-motion community.

Conference Paper↗
USGS2025

Laboratory assessment for recovery of porcine circovirus 2 and porcine reproductive and respiratory syndrome virus using two types of commercially available hollow-fiber ultrafilters

Groundwater near swine farms is an uninvestigated reservoir for porcine reproductive and respiratory syndrome virus (PRRSV) and porcine circoviruses (PCVs). Enteric microorganisms are often collected from groundwater via dead-end ultrafiltration, but recovery of PRRSV and PCV with this method has not been assessed. We recovered PRRSV2 and PCV2 by dead-end ultrafiltration followed by polyethylene glycol (PEG) precipitation, nucleic acid extraction, and reverse-transcription quantitative real-time PCR. We also compared 2 commercial hemodialysis ultrafilters (Asahi Kasei Rexeed-25A, Nipro Elisio-25H) and compared PRRSV2 recovery in these filters to other waterborne microorganisms. On average, 8 ± 1% of PRRSV2 was recovered by dead-end ultrafiltration and PEG precipitation, compared to 25 ± 6% for adenovirus 41. Full-process recovery of bacteria in the same filters was 5–15%; Cryptosporidium parvum recovery was 42 ± 12%. PCV2 was detected in 4 of 12 replicate filters, but low stock concentrations precluded quantitative recovery estimates. Elisio-25H ultrafilters performed similarly to Rexeed-25A filters for all organisms tested and is an effective replacement for the Rexeed-25A, which is no longer available in the United States. Our recovery of PRRSV2 and PCV2 by dead-end ultrafiltration in the laboratory suggests that PRRSV2 detection limits are as low as 3–50 genomic copies/L in sample volumes of 100–1,500 L. Based on quantitative microbial risk assessment, these concentrations are relevant to PRRSV2 infection rates in the U.S. swine herd.

Journal of Veterinary Diagnostic Investigation↗