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Approaches to the conservation of coastal wetlands in the Western Hemisphere

Coastal wetlands rank among the most productive and ecologically valuable natural ecosystems on Earth. Unfortunately, they are also some of the most disturbed. Because they are productive and can serve as transportation arteries, coastal wetlands have long attracted human settlement. More than half of the U.S. population currently lives within 80 km of its coasts, and one estimate places 70% of all humanity in the coastal zone. Human impacts to coastal wetlands include physical alteration of hydrological processes; the introduction of toxic materials, nutrients, heat, and exotic species; and the unsustainable harvest of native species. Between 1950 and 1970, coastal wetland losses in the U.S. averaged 8 100 ha/year. In Central and South America, development pressures along the coastal zone rank among the most serious natural resource problems in the region..... Here, we (1) briefly describe coastal wetland avifauna, (2) discuss the threat of global warming on coastal wetlands, (3) use several Western Hemisphere wetlands as site-specific examples of development pressures facing these habitats, and (4) provide synopses of nongovernmental and governmental approaches to wetland conservation. Overall, we provide a socio-economic context for conservation of coastal wetlands in the Western Hemisphere. We suggest that efforts aimed at conserving sites of particular importance for their biological diversity should be pursued within a framework of wise use that addresses the broader issues of human population growth and economic development.

The Wilson Bulletin↗

Denali Park wolf studies: Implications for Yellowstone

The Northern Rocky Mountain Wolf Recovery Plan approved by the U.S. Fish and Wildlife Service (1987) recommends re-establishment of wolves ( Canis lupus ) in Yellowstone National Park. Bills proposing wolf re-establishment in the Park have been introduced into the U.S. House and Senate. However, several questions have been raised about the possible effects of wolf re-establishment on other Yellowstone Park fauna, on human use of the Park and on human use of surrounding areas. Thus the proposed wolf re-establishment remains controversial. Information pertinent to some of the above questions is available from a current study of wolf ecology in Denali National Park and Preserve, Alaska, which we began in 1986. Although Denali Park differs from Yellowstone in several ways, it is also similar enough in important respects to provide insight into questions raised about wolf re-establishment in Yellowstone.

Transactions of the North American Wildlife and Na↗

Golden Eagle Monitoring Plan for the Desert Renewable Energy Conservation Plan

This report describes options for monitoring the status and population trends of the golden eagle (Aquila chrysaetos) within the Desert Renewable Energy Conservation Plan (DRECP) area of Southern California in maintaining stable or increasing population in the planning area. The report profiles the ecology of golden eagles in the region and provides a range of potential sampling options to address monitoring needs and objectives. This approach also focused on links between changes in human land-use, golden eagle nesting and foraging habitat conditions, and population dynamics. The report outlines how monitoring data from demographic, prey, and habitat studies were used to develop a predictive demographic model for golden eagles in the DRECP area. Results from the model simulations suggest increases in renewable energy development could have negative consequences for population trajectories. Results also suggest site-specific conservation actions could reduce the magnitude of negative impacts to the local population of eagles. A monitoring framework is proposed including: (1) annual assessments of site-occupancy and reproduction by territorial pairs of golden eagles (including rates at which sites become colonized or vacated over time); (2) estimates of survival, movements, and intensity of use of landscapes by breeding and non-breeding golden eagles; (3) periodic (conducted every two to four years) assessments of nesting and foraging habitats, prey populations, and associations with land-use and management activities; and (4) updating the predictive demographic model with new information obtained on eagles and associated population stressors. The results of this research were published in the Journal of Rapture Research, Wiens, David,Inman, Rich D., Esque, Todd C., Longshore, Kathleen M. and Nussear, Kenneth (2017). Spatial Demographic Models to Inform Conservation Planning of Golden Eagles in Renewable Energy Landscapes. 51(3):234-257.

Report↗

Fulfilling a paradoxical mandate: can the Environmental Water Account ensure the reliability of freshwater exports from the Sacramento-San Joaquin Delta and simultaneously protect delta smelt (Hypomesus transpacificus) from excessive entrainment?

The San Francisco Estuary (SFE) is often defined by its extremes. It is considered one of the most urbanized estuaries in the world (Conomos 1979, Nichols et al. 1986), and one of the most invaded estuaries in the United States, with hundreds of aquatic nonindigenous species established throughout the system (Cohen and Carlton 1995, Dill and Cordone 1997, Kimmerer and Orsi 1996). It is also one of the most managed estuaries, particularly in relation to freshwater inflow, water circulation, and water quality (Jassby and Powell 1994, CSWRCB 1995, Arthur et al. 1996, Kimmerer 2002). Despite this high level of disturbance, the SFE is one of the most valuable natural resources in the western United States (CALFED 2000). The SFE provides important habitat for numerous native plant and animal species, many of special concern, as well as several species with sport and commercial value (CALFED 2000). Conserving and restoring estuarine habitat and natural resources is a pressing and complex challenge for the responsible government agencies because human water needs continue to increase in concert with continuing urbanization of the watershed.

Interagency Ecological Program Newsletter↗

Water quality

Sustainable water policy in California will require maintaining or improving water quality. The Delta is an important source of drinking water for Californians, but sustaining a quality sufficient for human and agricultural consumption presents a number of problems and challenges to water managers. Similarly, poor environmental water quality is recognized as one of the influential stressors contributing to the ecological problems of the Delta (Bennett 2005; Kimmerer 2004).

California↗

Linking scale-specific sinuosity to hydrogeomorphic domains in Alaska watersheds

River meander patterns arise from geomorphological processes influenced by climate, geology, terrain, and hydrology. These processes produce a wide spectrum of sinuous channel and meander forms, and understanding them is essential for land management practices, such as natural channel restoration (Dominguez et al., 2018), flood and erosion control, bank stabilization (U.S. Department of Interior, 2015), and riparian corridor and agricultural land management (Ran, et al., 2022; Yu, et al., 2023; Zhu et al., 2022). Studies of meander migration provide insight into sediment dynamics and river ecosystem health (Ielpi et al. 2023, Constantine et al., 2014). A river’s natural ability to clean itself, or reduce pollutants, through physical, chemical, and biological processes, also termed self-purification capacity, has been linked to river sinuosity (Xiao et al, 2019, 2025). Scale-specific sinuosity (S3) is an easily computed metric for characterizing planform meander bend geometry across a range of measurement scales (Stanislawski et al., 2023). Unlike the traditional single summary value of sinuosity for a stream section, S3 estimates the relative distribution of meander‑bend sizes, such as peak‑to‑trough lengths, within a planform linear representation of a stream section, along with the relative contributions of these bend sizes to its overall sinuosity. The aim of this study is to assess the potential of S3 as a diagnostic geomorphic metric with applications to process-based river and fluvial domain classification. Rivers vary widely in their sensitivity to change depending on sediment and bedload materials, landscape position, and hydroclimatic variability, including flooding or drought. River classification systems were developed to organize the diversity of river forms and processes in ways that support both scientific understanding and management needs. Classification provides a framework for geomorphological analyses related to resource assessment, habitat evaluation, and mitigation of natural or human-driven disturbances. Process-based classification systems help predict how channels respond to changes in flow or sediment regimes (Buffington and Montgomery, 2022), and also support resource exploration because ecological habitats, mineral deposits, and other natural resources often correspond to sediment characteristics that vary systematically across channel types (Rosgen, 1994; Wheaton et al., 2013; Wheaton et al., 2015). Planform-based metrics such as channel sinuosity have long been components of river classification systems (Rosgen, 1994; Wheaton et al., 2015; Buffington and Montgomery, 2022), where sinuosity is measured as a simple ratio of path length over end-to-end distance.

Alaska↗

A review of land–sea coupling by groundwater discharge of nitrogen to New England estuaries: Mechanisms and effects

Hydrologists have long been concerned with the interface of groundwater flow into estuaries, but not until the end of the last century did other disciplines realize the major role played by groundwater transport of nutrients to estuaries. Mass balance and stable isotopic data suggest that land-derived NO 3 , NH 4 , and dissolved organic N do enter estuaries in amounts likely to affect the function of the receiving ecosystem. Because of increasing human occupancy of the coastal zone, the nutrient loads borne by groundwater have increased in recent decades, in spite of substantial interception of nutrients within the land and aquifer components of watersheds. Groundwater-borne nutrient loads have increased the N content of receiving estuaries, increased phytoplankton and macroalgal production and biomass, decreased the area of seagrasses, and created a cascade of associated ecological changes. This linkage between land use and eutrophication of estuaries occurs in spite of mechanisms, including uptake of land-derived N by riparian vegetation and fringing wetlands, “unloading” by rapid water removal, and direct N inputs to estuaries, that tend to uncouple the effects of land use on receiving estuaries. It can be expected that as human activity on coastal watersheds continues to increase, the role of groundwater-borne nutrients to the receiving estuary will also increase.

New England↗

The ecology of climate change and infectious diseases

The projected global increase in the distribution and prevalence of infectious diseases with climate change suggests a pending societal crisis. The subject is increasingly attracting the attention of health professionals and climate-change scientists, particularly with respect to malaria and other vector-transmitted human diseases. The result has been the emergence of a crisis discipline, reminiscent of the early phases of conservation biology. Latitudinal, altitudinal, seasonal, and interannual associations between climate and disease along with historical and experimental evidence suggest that climate, along with many other factors, can affect infectious diseases in a nonlinear fashion. However, although the globe is significantly warmer than it was a century ago, there is little evidence that climate change has already favored infectious diseases. While initial projections suggested dramatic future increases in the geographic range of infectious diseases, recent models predict range shifts in disease distributions, with little net increase in area. Many factors can affect infectious disease, and some may overshadow the effects of climate.

Ecology↗

Transforming ecosystems: When, where, and how to restore contaminated sites

Chemical contamination has impaired ecosystems, reducing biodiversity and the provisioning of functions and services. This has spurred a movement to restore contaminated ecosystems and develop and implement national and international regulations that require it. Nevertheless, ecological restoration remains a young and rapidly growing discipline and its intersection with toxicology is even more nascent and underdeveloped. Consequently, we provide guidance to scientists and practitioners on when, where, and how to restore contaminated ecosystems. Although restoration has many benefits, it also can be expensive, and in many cases systems can recover without human intervention. Hence, the first question we address is: “When should we restore contaminated ecosystems?” Second, we provide suggestions on what to restore—biodiversity, functions, services, all 3, or something else—and where to restore given expected changes to habitats driven by global climate change. Finally, we provide guidance on how to restore contaminated ecosystems. To do this, we analyze critical aspects of the literature dealing with the ecology of restoring contaminated ecosystems. Additionally, we review approaches for translating the science of restoration to on-the-ground actions, which includes discussions of market incentives and the finances of restoration, stakeholder outreach and governance models for ecosystem restoration, and working with contractors to implement restoration plans. By explicitly considering the mechanisms and strategies that maximize the success of the restoration of contaminated sites, we hope that our synthesis serves to increase and improve collaborations between restoration ecologists and ecotoxicologists and set a roadmap for the restoration of contaminated ecosystems.

Integrated Environmental Assessment and Management↗

Defining conservation priorities for freshwater fishes according to taxonomic, functional, and phylogenetic diversity

To date, the predominant use of systematic conservation planning has been to evaluate and conserve areas of high terrestrial biodiversity. Although studies in freshwater ecosystems have received recent attention, research has rarely considered the potential trade-offs between protecting different dimensions of biodiversity and the ecological processes that maintain diversity. We provide the first systematic prioritization for freshwaters (focusing on the highly threatened and globally distinct fish fauna of the Lower Colorado River Basin, USA) simultaneously considering scenarios of: taxonomic, functional, and phylogenetic diversity; contemporary threats to biodiversity (including interactions with nonnative species); and future climate change and human population growth. There was 75% congruence between areas of highest conservation priority for different aspects of biodiversity, suggesting that conservation efforts can concurrently achieve strong complementarity among all types of diversity. However, sizable fractions of the landscape were incongruent across conservation priorities for different diversity scenarios, underscoring the importance of considering multiple dimensions of biodiversity and highlighting catchments that contribute disproportionately to taxonomic, functional, and phylogenetic diversity in the region. Regions of projected human population growth were not concordant with conservation priorities; however, higher human population abundance will likely have indirect effects on native biodiversity by increasing demand for water. This will come in direct conflict with projected reductions in precipitation and warmer temperatures, which have substantial overlap with regions of high contemporary diversity. Native and endemic fishes in arid ecosystems are critically endangered by both current and future threats, but our results highlight the use of systematic conservation planning for the optimal allocation of limited resources that incorporates multiple and complementary conservation values describing taxonomic, functional, and phylogenetic diversity.

Ecological Applications↗

Monitoring carnivore populations at the landscape scale: occupancy modelling of tigers from sign surveys

1. Assessing spatial distributions of threatened large carnivores at landscape scales poses formidable challenges because of their rarity and elusiveness. As a consequence of logistical constraints, investigators typically rely on sign surveys. Most survey methods, however, do not explicitly address the central problem of imperfect detections of animal signs in the field, leading to underestimates of true habitat occupancy and distribution. 2. We assessed habitat occupancy for a tiger Panthera tigris metapopulation across a c. 38 000-km 2 landscape in India, employing a spatially replicated survey to explicitly address imperfect detections. Ecological predictions about tiger presence were confronted with sign detection data generated from occupancy sampling of 205 sites, each of 188 km 2 . 3. A recent occupancy model that considers Markovian dependency among sign detections on spatial replicates performed better than the standard occupancy model (ΔAIC = 184·9). A formulation of this model that fitted the data best showed that density of ungulate prey and levels of human disturbance were key determinants of local tiger presence. Model averaging resulted in a replicate-level detection probability [inline image] = 0·17 (0·17) for signs and a tiger habitat occupancy estimate of [inline image] = 0·665 (0·0857) or 14 076 (1814) km2 of potential habitat of 21 167 km 2 . In contrast, a traditional presence-versus-absence approach underestimated occupancy by 47%. Maps of probabilities of local site occupancy clearly identified tiger source populations at higher densities and matched observed tiger density variations, suggesting their potential utility for population assessments at landscape scales. 4. Synthesis and applications. Landscape-scale sign surveys can efficiently assess large carnivore spatial distributions and elucidate the factors governing their local presence, provided ecological and observation processes are both explicitly modelled. Occupancy sampling using spatial replicates can be used to reliably and efficiently identify tiger population sources and help monitor metapopulations. Our results reinforce earlier findings that prey depletion and human disturbance are key drivers of local tiger extinctions and tigers can persist even in human-dominated landscapes through effective protection of source populations. Our approach facilitates efficient targeting of tiger conservation interventions and, more generally, provides a basis for the reliable integration of large carnivore monitoring data between local and landscape scales.

Journal of Applied Ecology↗

Using a BACI design to assess stream ecology and chemistry response after wildfire

Wildfires can have complex effects on aquatic communities, which can be either beneficial or adverse depending on the setting. In California, USA, the size, frequency, and severity of wildfires has greatly increased over the last few decades. Understanding the effects of fire on aquatic ecosystem health and human land use has become increasingly important in managing the interface of the natural and urban landscape. In this study, we used a before–after control–impact (BACI) study design to test for differences in bed sediment chemistry, water chemistry, benthic algal biomass, and benthic macroinvertebrate communities between burned and unburned (control) watersheds, pre- and post-fire, using data collected before and after California’s 2017 Atlas, Nuns, and Tubbs wildfires. We found a treatment effect (burned vs control) on water chemistry, sediment trace-metal concentrations, algae, and community structure of benthic macroinvertebrates, but we found no evidence of an interaction between time period (pre- vs post-fire) and treatment. Both the difference in environmental factors between our control and burned sample sites and the proximity and degree of wildfire burn severity may have contributed to the results of this BACI study. Our results also highlight the importance of including control sites when assessing the effects of discrete disturbances, such as wildfire, to avoid spurious conclusions of disturbance effects that may be attributable to innate ecological variability.

Freshwater Science↗

Effects of climate change on ecological disturbance in the Northern Rockies Region [Chapter 8]

This chapter describes the ecology of important disturbance regimes in the Forest Service, U.S. Department of Agriculture (USFS) Northern Region and the Greater Yellowstone Area, hereafter called the Northern Rockies region, and potential shifts in these regimes as a consequence of observed and projected climate change. The term disturbance regime describes the general temporal and spatial characteristics of a disturbance agent - insect, disease, fire, weather, even human activity - and the effects of that agent on the landscape (table 8.1). More specifically, a disturbance regime is the cumulative effect of multiple disturbance events over space and time (Keane 2013). Disturbances disrupt an ecosystem, community, or population structure and change elements of the biological environment, physical environment, or both (White and Pickett 1985). The resulting shifting mosaic of diverse ecological patterns and structures in turn affects future patterns of disturbance, in a reciprocal, linked relationship that shapes the fundamental character of landscapes and ecosystems. Disturbance creates and maintains biological diversity in the form of shifting, heterogeneous mosaics of diverse communities and habitats across a landscape (McKinney and Drake 1998), and biodiversity is generally highest when disturbance is neither too rare nor too frequent on the landscape (Grime 1973).

General Technical Report↗

Ecological effects of establishing a 40-year oasis protection system in a Northwestern China Desert

Aims: Desertification around oasis areas is a serious problem in semi-arid and arid regions, which is expected to continue into the future due to a rapidly increasing human population. Oasis protection systems are created to reverse desertification by recovering degraded soil and vegetation properties and improving ecosystem services. Most research has focused on the short-term effects of a single restoration practice using an individual vegetation or soil metric, while more complete assessments along a gradient of an entire oasis protection system have seldom been studied. In this study, soil and vegetation properties were measured along a 40-year oasis-protection system to assess the effectiveness of increasing land protection belts along a gradient from prohibiting grazing, to fencing shrubland, to establishing shrub- and tree-plantations in northwestern China. Methods: Three sites in each belt of the oasis-protection system were selected to measure soil texture, soil organic carbon, total nitrogen, total phosphorus, pH, electrical conductivity, and eight ions under the plant canopy and in the inter-canopy area, as well as to investigate plant community composition, diversity and productivity. Wind velocity and sand transportation rates were measured in each of the five belts during storm events. Results: Compared with shifting dunes in unprotected desert settings, the wind velocity and sand transportation rate decreased by 75 and 98%, respectively, when spring storms passed through the most protected plantation belts in the oasis system. Soil organic carbon, total nitrogen, total phosphorus significantly increased, along with the silt and clay contents, across the protection gradient, and reached their highest levels at the shrub- and tree-plantation belts. Similarly, the density, cover, and biomass of herbaceous plants also increased along the gradient. Despite these positive effects, there was a significant increase in soil salinity, sodicity, and desiccation at the shrub- and tree-plantation belts, which may negatively affect the future sustainability of the oasis-protection system under a predicted future drier and warming climate. Conclusions Although shrub and tree plantations improve soil fertility and favor the development of the herbaceous plant community, their environmental consequences (i.e., soil salinization and desiccation) need to be evaluated in the context of ecosystem restoration over the long-term, especially in arid regions.

Catena↗

Microbial disease and the coral holobiont

Tropical coral reefs harbour a reservoir of enormous biodiversity that is increasingly threatened by direct human activities and indirect global climate shifts. Emerging coral diseases are one serious threat implicated in extensive reef deterioration through disruption of the integrity of the coral holobiont – a complex symbiosis between the coral animal, endobiotic alga and an array of microorganisms. In this article, we review our current understanding of the role of microorganisms in coral health and disease, and highlight the pressing interdisciplinary research priorities required to elucidate the mechanisms of disease. We advocate an approach that applies knowledge gained from experiences in human and veterinary medicine, integrated into multidisciplinary studies that investigate the interactions between host, agent and environment of a given coral disease. These approaches include robust and precise disease diagnosis, standardised ecological methods and application of rapidly developing DNA, RNA and protein technologies, alongside established histological, microbial ecology and ecological expertise. Such approaches will allow a better understanding of the causes of coral mortality and coral reef declines and help assess potential management options to mitigate their effects in the longer term.

Trends in Microbiology↗

The status and conservation needs of the Micronesian Megapode (Megapodius laperouse laperouse) across the Mariana archipelago

Context Accurate baseline data for wildlife populations are important to track trends of these populations over time and to identify threats to their long-term persistence. Aims We aimed to assess the status and distribution of the little studied megapode ( Megapodius laperouse laperouse ) across the Mariana Islands. Methods Using passive and call playback facilitated surveys in 2008 through 2010, we employed point–transect distance sampling to assess island-level and archipelago-wide status of this megapode. To assess conservation needs, we defined human presence as the current, recent, or intermittent occurrence of humans on islands. Key results We recorded 657 megapode detections and estimated an archipelago level abundance of 11,542 individuals (95% CI: 5456–17,623) from 699 sampling points across 10 islands. Three islands supported 86% of the megapode population, but cumulatively comprise only 2% of the archipelago’s land area. Conclusions Micronesian Megapodes preferred native forest. Human presence and the availability of native forest may limit their abundance and distribution in the Mariana Islands. Although the probability of detecting megapodes was significantly greater on islands without high human presence, significantly more detections were recorded in forests with dense or closed understory on those islands that supported greater human populations. Implications Given their status and confined distribution in the Mariana Islands, additional studies investigating megapode incubation sites and movement within and between islands would provide fundamental information on megapode ecology and enhance conservation efforts. Continued and expanded ungulate removal, predator control, and habitat restoration would further enhance the likelihood of megapode persistence in the archipelago.

Pacific Conservation Biology↗

Diets of aquatic birds reflect changes in the Lake Huron ecosystem

Human activities have affected the Lake Huron ecosystem, in part, through alterations in the structure and function of its food webs. Insights into the nature of food web change and its ecological ramifications can be obtained through the monitoring of high trophic level predators such as aquatic birds. Often, food web change involves alterations in the relative abundance of constituent species and/or the introduction of new species (exotic invaders). Diet composition of aquatic birds is influenced, in part, by relative prey availability and therefore is a sensitive measure of food web structure. Using bird diet data to make inferences regarding food web change requires consistent measures of diet composition through time. This can be accomplished by measuring stable chemical and/or biochemical “ecological tracers” in archived avian samples. Such tracers provide insights into pathways of energy and nutrient transfer. In this study, we examine the utility of two groups of naturally-occurring intrinsic tracers (stable isotopes and fatty acids) to provide such information in a predatory seabird, the herring gull ( Larus argentatus ). Retrospective stable nitrogen and carbon isotope analysis of archived herring gull eggs identified declines in gull trophic position and shifts in food sources in Lake Huron over the last 25 years and changes in gull diet composition were inferred from egg fatty acid patterns. These independent groups of ecological tracers provided corroborating evidence of dietary change in this high trophic level predator. Gull dietary shifts were related to declines in prey fish abundance which suggests large-scale alterations to the Lake Huron ecosystem. Dietary shifts in herring gulls may be contributing to reductions in resources available for egg formation. Further research is required to evaluate how changes in resource availability may affect population sustainability in herring gulls and other waterbird species. Long-term biological monitoring programs are required to identify ecosystem change and evaluate its ecological significance.

Lake Huron↗

Representing plant diversity in land models: An evolutionary approach to make ‘Functional Types’ more functional

Plants are critical mediators of terrestrial mass and energy fluxes, and their structural and functional traits have profound impacts on local and global climate, biogeochemistry, biodiversity, and hydrology. Yet Earth System Models (ESMs), our most powerful tools for predicting the effects of humans on the coupled biosphere-atmosphere system, simplify the incredible diversity of land plants into a handful of coarse categories of ‘Plant Functional Types’ (PFTs) that often fail to capture ecological dynamics such as biome distributions. The inclusion of more realistic functional diversity is a recognized goal for ESMs, yet there is currently no consistent, widely accepted way to add diversity to models, i.e. to determine what new PFTs to add and with what data to constrain their parameters. We review approaches to representing plant diversity in ESMs and draw on recent ecological and evolutionary findings to present an evolution-based functional type approach for further disaggregating functional diversity. Specifically, the prevalence of niche conservatism, or the tendency of closely related taxa to retain similar ecological and functional attributes through evolutionary time, reveals that evolutionary relatedness is a powerful framework for summarizing functional similarities and differences among plant types. We advocate that Plant Functional Types based on dominant evolutionary lineages (‘Lineage Functional Types’) will provide an ecologically defensible, tractable, and scalable framework for representing plant diversity in next-generation ESMs, with the potential to improve parameterization, process representation, and model benchmarking. We highlight how the importance of evolutionary history for plant function can unify the work of disparate fields to improve predictive modeling of the Earth system.

Global Change Biology↗