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At least 793 records · Page 44Linked to original sources

Monitoring cyanobacteria temporal trends in a hypereutrophic lake using remote sensing: From multispectral to hyperspectral

Cyanobacterial harmful algal blooms (cyanoHABs) and associated cyanotoxins are a concern for inland waters. Due to the extensive spatial coverage and frequent availability of satellite images, multispectral remote sensing tools demonstrate utility for monitoring these blooms. The next frontier for remote sensing of cyanoHABs in inland waters is hyperspectral data. Recent and upcoming hyperspectral satellite missions using narrow wavelength imaging spectrometers could have a major impact on advancing our ability to detect, quantify, and characterize cyanobacterial blooms. This study compares multispectral and hyperspectral remote sensing capabilities and processing tools for monitoring cyanoHAB dynamics. We evaluated the temporal trends of cyanoHABs in Clear Lake, California, a hypereutrophic lake with diverse cyanobacteria genera based on 38 sampling events over a five-year monitoring period (2019–2023). We validated the Sentinel-3 Ocean and Land Color Instrument (multispectral) Cyanobacteria Index algorithm for Clear Lake using in situ cyanobacteria measurements, which complemented our field-based evaluation of cyanobacteria trends in Clear Lake. We then demonstrate the advantages of hyperspectral data from both in situ spectroradiometer measurements and full-lake hyperspectral satellite images. We apply the Spectral Mixture Analysis for Surveillance of HABs (SMASH) workflow, a Multiple Endmember Spectral Mixture Analysis (MESMA) algorithm, to the hyperspectral images to assess the potential of satellite imaging spectrometer data to identify cyanobacteria genera – the first study to test this tool outside its original study sites. We developed a Clear Lake-specific cyanobacteria spectral library using our field spectroradiometer measurements to improve SMASH performance in Clear Lake, which supports the continued development of this tool.

California↗

Why are freshwater fish so threatened?

The huge diversity of freshwater fishes is concentrated into an area of habitat that covers only about 1% of the Earth's surface, and much of this limited area has already been extensively impacted and intensively managed to meet human needs (Dudgeon et al ., 2006). As outlined in Chapter 1, the number and proportions of threatened species tend to rise wherever fish diversity coincides with dense human populations, intensive resource use and development pressure. Of particular concern is the substantial proportion of the global diversity of freshwater fishes concentrated within the Mekong and Amazon Basins and west-central Africa (Berra, 2001; Abell et al ., 2008; Dudgeon, 2011; Chapter 1) with extensive exploitation of water resources planned to accelerate in future years (Dudgeon, 2011; Chapter 1). If current trends continue, and the social, political and economic models that have been used to develop industrialised regions of the world over the past two centuries prevail, then the future of a significant proportion of global diversity of freshwater fish species is clearly uncertain. Understanding why so many freshwater fish species are threatened requires some understanding of their biology, diversity, distribution, biogeography and ecology, but also some appreciation of the social, economic and political forces that are causing humans to destroy the natural ecosystems upon which we all ultimately depend. To begin to understand the diversity of freshwater fishes, we first need to consider the processes that generated and continue to sustain the diversity of species we see today. Based on an understanding of how freshwater fish diversity is generated and sustained, we consider how vulnerable or resilient various freshwater fishes are to the range of anthropogenic impacts that impinge on freshwater ecosystems. Finally, we discuss how social, political and economic drivers influence human impacts on natural systems, and the changes needed to current models of development that can lead to a sustainable future for humans and the diverse range of freshwater fish species with which we share our planet. The aim of this chapter is to provide an overview of the key issues and threats driving the declines in freshwater fish diversity identified in Chapter 1; subsequent chapters provide more detail on the key issues and address our options for developing a sustainable future for freshwater fishes.

Book chapter↗

Quantifying resilience

The biosphere is under unprecedented pressure, reflected in rapid changes in our global ecological, social, technological and economic systems. In many cases, ecological and social systems can adapt to these changes over time, but when a critical threshold is surpassed, a system under stress can undergo catastrophic change and reorganize into a different state. The concept of resilience, introduced more than 40 years ago in the ecological sciences, captures the behaviour of systems that can occur in alternative states. The original definition of resilience forwarded by Holling ( 1973 ) is still the most useful. It defines resilience as the amount of disturbance that a system can withstand before it shifts into an alternative stable state. The idea of alternative stable states has clear and profound implications for ecological management. Coral reefs, for example, are high-diversity systems that provide key ecosystem services such as fisheries and coastal protection. Human impacts are causing significant, ongoing reef degradation, and many reefs have shifted from coral- to algal-dominated states in response to anthropogenic pressures such as elevated water temperatures and overfishing. Understanding and differentiating between the factors that help maintain reefs in coral-dominated states vs. those that facilitate a shift to an undesired algal-dominated state is a critical step towards sound management and conservation of these, and other, important social–ecological systems. Resilience has gained popularity among both academicians and laypeople, as a term meant to describe a systems’ ability to withstand disturbance. Resilience has become a buzzword in the last decade, as shown by its increasing appearance in calls for research proposals and scientific citation data bases. The term resilience has in many cases lost the clarity of the original definition and in fact is frequently used in a manner in direct opposition to the original definition. Many current uses of the concept are loose and incorrect. The term is becoming increasingly used in a normative sense (Brand & Jax 2007 ), as if resilience were a desirable quality of systems. However, even systems in highly undesirable states, such as macro-algae dominated reefs, or city cores in poverty traps, may be highly resilient, which is to say they withstand attempts to transform them into different (desirable) states. Operationalizing the concept of resilience for application and management has been difficult. Misuse of the term can have significant negative impacts, because resilience is being used to help guide responses to natural disasters and to assess the sustainability of ecosystems and urban systems and has been driving international research priorities. Resilience has been argued to be a basic emergent property of systems, a process or a rate. We focus on the original concept as described by Holling, which is that of an emergent system property; when a system is in a desirable state and managers wish to enhance resilience, or when the system is in an undesirable state and managers wish to erode resilience and foster a transformation to an alternative state. Fostering or eroding resilience is a process. When a system is perturbed but resilience is not exceeded, then the recovery can be measured as a rate. Several frameworks to operationalize resilience have been proposed. A decade ago, a special feature focused on quantifying resilience was published in the journal Ecosystems (Carpenter, Westley & Turner 2005 ). The approach there was towards identifying surrogates of resilience, but few of the papers proposed quantifiable metrics. Consequently, many ecological resilience frameworks remain vague and difficult to quantify, a problem that this special feature aims to address. However, considerable progress has been made during the last decade (e.g. Pope, Allen & Angeler 2014 ). Although some argue that resilience is best kept as an unquantifiable, vague concept (Quinlan et al . 2016 ), to be useful for managers, there must be concrete guidance regarding how and what to manage and how to measure success (Garmestani, Allen & Benson 2013 ; Spears et al . 2015 ). Ideas such as ‘resilience thinking’ have utility in helping stakeholders conceptualize their systems, but provide little guidance on how to make resilience useful for ecosystem management, other than suggesting an ambiguous, Goldilocks approach of being just right (e.g. diverse, but not too diverse; connected, but not too connected). Here, we clarify some prominent resilience terms and concepts, introduce and synthesize the papers in this special feature on quantifying resilience and identify core unanswered questions related to resilience.

Journal of Applied Ecology↗

Landfill leachate contributes per-/poly-fluoroalkyl substances (PFAS) and pharmaceuticals to municipal wastewater

Widespread disposal of landfill leachate to municipal sewer infrastructure in the United States calls for an improved understanding of the relative organic-chemical contributions to the wastewater treatment plant (WWTP) waste stream and associated surface-water discharge to receptors in the environment. Landfill leachate, WWTP influent, and WWTP effluent samples were collected from three landfill-WWTP systems and compared with analogous influent and effluent samples from two WWTPs that did not receive leachate. Samples were analyzed for 73 per-/poly-fluoroalkyl substances (PFAS), 109 pharmaceuticals, and 21 hormones and related compounds. PFAS were detected more frequently in leachate (92%) than in influent (55%). Total PFAS concentrations in leachate (93,100 ng/L) were more than ten times higher than in influent (6,950 ng/L), and effluent samples (3,730 ng/L). Concentrations of bisphenol A; the nonprescription pharmaceuticals cotinine, lidocaine, nicotine; and the prescription pharmaceuticals amphetamine, carisoprodol, pentoxifylline, and thiabendazole were an order of magnitude higher in landfill leachate than WWTP influent. Leachate load contributions for PFAS (0.78 to 31 g/d), bisphenol A (0.97 to 8.3 g/d), and nonprescription (2.0 to 3.1 g/d) and prescription (0.48 to 2.5 g/d) pharmaceuticals to WWTP influent were generally low (<10 g/d) for most compounds because of high influent-to-leachate volumetric ratios (0.983). No clear differences in concentrations were apparent between effluents from WWTPs receiving landfill leachate and those that did not receive landfill leachate.

Environmental Science: Water Research & Technology↗

Controlled photomosaic map of Callisto JC 15M CMN

This sheet is one in a series of maps of the Galilean satellites of Jupiter at a nominal scale of 1:15,000,000. This series is based on data from the Galileo Orbiter Solid-State Imaging (SSI) camera and the cameras of the Voyager 1 and 2 spacecraft. Mercator and Polar Stereographic projections used for this map of Callisto are based on a sphere having a radius of 2,409.3 km. The scale is 1:8,388,000 at ±56° latitude for both projections. Longitude increases to the west in accordance with the International Astronomical Union (1971) (Seidelmann and others, 2002). The geometric control network was computed at the RAND Corporation using RAND's most recent solution as of April 1999 (Davies and Katayama, 1981; Davies and others, 1998). This process involved selecting control points on the individual images, making pixel measurements of their locations, using reseau locations to correct for geometric distortions, and converting the measurements to millimeters in the focal plane. These data are combined with the camera focal lengths and navigation solutions as input to photogrammetric triangulation software that solves for the best-fit sphere, the coordinates of the control points, the three orientation angles of the camera at each exposure (right ascension, declination, and twist), and an angle (W0) which defines the orientation of Callisto in space. W0-in this solution 259.51°-is the angle along the equator to the east, between the 0° meridian and the equator's intersection with the celestial equator at the standard epoch J2000.0. This solution places the crater Saga at its defined longitude of 326° west (Seidelmann and others, 2002). This global map base uses the best image quality and moderate resolution coverage supplied by Galileo SSI and Voyager 1 and 2 (Batson, 1987; Becker and others, 1998; Becker and others, 1999; Becker and others, 2001). The digital map was produced using Integrated Software for Imagers and Spectrometers (ISIS) (Eliason, 1997; Gaddis and others, 1997; Torson and Becker, 1997). The individual images were radiometrically calibrated and photometrically normalized using a Lunar-Lambert function with empirically derived values (McEwen, 1991; Kirk and others, 2000). A linear correction based on the statistics of all overlapping areas was then applied to minimize image brightness variations. The image data were selected on the basis of overall image quality, reasonable original input resolution (from 20 km/pixel for gap fill to as much as 150 m/pixel), and availability of moderate emission/incidence angles for topography. Although consistency was achieved where possible, different filters were included for global image coverage as necessary: clear for Voyager 1 and 2; clear and green (559 nm) for Galileo SSI. Individual images were projected to a Sinusoidal Equal-Area projection at an image resolution of 1.0 kilometer/pixel. The final constructed Sinusoidal projection mosaic was then reprojected to the Mercator and Polar Stereographic projections included on this sheet. The final mosaic was enhanced using commercial software. Names on this sheet are approved by the International Astronomical Union. Names have been applied for features clearly visible at the scale of this map; for a complete list of nomenclature for Callisto, please see the Gazeteer of Planetary Nomenclature. Font color was chosen only for readability.

IMAP↗

Interseasonal covariability of Sierra Nevada streamflow and San Francisco Bay salinity

The ecosystems of the San Francisco Bay estuary are influenced by the salinity of its waters, which in turn depends on flushing by freshwater inflows from the western slopes of the Sierra Nevada. Estimates of full-natural flows in eight major rivers that flush the Bay are analyzed here by extended empirical-orthogonal-function analyses to characterize distinct &lsquo;modes&rsquo; of seasonal flow and runoff variability. These modes provide a clear identification of the seasons in which the various rivers respond to hydroclimatic forcings and the seasons during which the rivers most strongly affect San Francisco Bay salinities. About 60 percent of the runoff variability is shared by the rivers over the course of a year but season-to-season differences among the rivers are more subtly distributed. Autumn and winter streamflows respond directly to concurrent (autumn and winter) precipitation and temperatures. Autumn and winter salinities are dominated by these flows, which in each season reflect mostly variations in flows from the central Sierra Nevada and the large Sacramento River. In contrast, spring runoff-rate and streamflow modes are functions of precipitation and temperature during the entire wet (winter and spring) season and are dominated by rivers of the central and southern Sierra Nevada. In turn, the critical spring salinities depend most on the streamflow fluctuations in those central and southern rivers.

California↗

Mars: Abundant recurring slope lineae (RSL) following the planet-encircling dust event (PEDE) of 2018

Recurring slope lineae (RSL) are dark linear markings on Mars that regrow annually and likely originate from the flow of either liquid water or granular material. Following the great dust storm (or planet-encircling dust event, PEDE) of Mars year (MY) 34, Mars Reconnaissance Orbiter/High Resolution Imaging Science Experiment has seen many more candidate RSL than in typical Mars years. They have been imaged at more than 285 unique locations from August 2018 (when the atmosphere was clearing as the PEDE decayed) to August 2019, about half (157) of which are locations where RSL have not been documented previously. In MY34, 150 active RSL sites were identified in the southern middle latitudes (SML, -60° to -30°), whereas an average of 36 active sites were observed in each previous year (MY28–33). Post-PEDE RSL are also present during southern summer over a wider range of latitude, slope aspect, and L s (areocentric longitude of the sun) than in prior years. These RSL sites usually show evidence for recent dust deposition: obscuration of relatively dark areas, an overall brighter and redder surface than in prior years, and dust devil tracks, which indicate dust lifting by several mechanisms. We speculate that dust-lifting processes may initiate and sustain RSL activity. The RSL may form from flows of dust (perhaps clumped) and/or sand that is destabilized by dust movement or directly mobilized by dust devils. If this is the case, then the otherwise puzzling recurrence and year-to-year variability of RSL activity can be at least partly explained. The dust replenishment varies from year to year, which could explain interannual variations in RSL activity.

Journal of Geophysical Research: Planets↗

Temperature-associated population diversity in salmon confers benefits to mobile consumers

Habitat heterogeneity can generate intraspecific diversity through local adaptation of populations. While it is becoming increasingly clear that population diversity can increase stability in species abundance, less is known about how population diversity can benefit consumers that can integrate across population diversity in their prey. Here we demonstrate cascading effects of thermal heterogeneity on trout–salmon interactions in streams where rainbow trout rely heavily on the seasonal availability of anadromous salmon eggs. Water temperature in an Alaskan stream varied spatially from 5°C to 17.5°C, and spawning sockeye salmon showed population differentiation associated with this thermal heterogeneity. Individuals that spawned early in cool regions of the 5 km long stream were genetically differentiated from those spawning in warmer regions later in the season. Sockeye salmon spawning generates a pulsed resource subsidy that supports the majority of seasonal growth in stream-dwelling rainbow trout. The spatial and temporal structuring of sockeye salmon spawn timing in our focal stream extended the duration of the pulsed subsidy compared to a thermally homogeneous stream with a single population of salmon. Further, rainbow trout adopted movement strategies that exploited the multiple pulses of egg subsidies in the thermally heterogeneous stream. Fish that moved to track the resource pulse grew at rates about 2.5 times higher than those that remained stationary or trout in the reference stream with a single seasonal pulse of eggs. Our results demonstrate that habitat heterogeneity can have important effects on the population diversity of dominant species, and in turn, influence their value to species that prey upon them. Therefore, habitat homogenization may have farther-reaching ecological effects than previously considered.

Ecology↗

Interactions of mercury with dissolved organic carbon in the Florida Everglades

There has been increased awareness by both public and scientific communities over mercury contamination of game fish in South Florida. Effective management strategies for dealing with this problem will require a more thorough understanding of the factors and processes that result in the generation and transport of mercury, and control its reactivity in the Everglades. The role of mercury complexation by dissolved organic carbon (DOC) has been proposed by several investigators as a primary mechanism for the transport of mercury in aquatic systems. However, this relationship has been simply proposed based on a strong correlation between dissolved mercury and DOC concentrations in ground, lake and stream waters. Interactions with DOC may be an important process for controlling the transport and bioavailability of mercury. The issue of carbon reactivity in South Florida is especially relevant due to the high natural production of organic carbon in the peat soils and wetlands, the relatively high carbon content of shallow ground water systems in the region, the interactions of organic matter with mercury, other trace metals, and anthropogenic compounds, accumulation of organic carbon in corals and carbonate precipitates, and the potential changes in the quality and reactivity of dissolved organic carbon (DOC) resulting from land use practices. This study will attempt to meet the need to more clearly understand the dynamics of organic matter mercury interactions in the Florida Everglades by focusing research on the effect of dissolved organic carbon (DOC) on the transport and reactivity of Hg in the Everglades.

Florida↗

Preliminary Mineralogic and Stable Isotope Studies of Altered Summit and Flank Rocks and Osceola Mudflow Deposits on Mount Rainier, Washington

About 5600 years ago part of Mount Rainier?s edifice collapsed with the resultant Osceola Mudflow traveling more than 120 km and covering an area of at least 505 km2. Mineralogic and stable isotope studies were conducted on altered rocks from outcrops near the summit and east flank of the volcano and samples of clasts and matrix from the Osceola Mudflow. Results of these analyses are used to constrain processes responsible for pre-collapse alteration and provide insight into the role of alteration in edifice instability prior to the Osceola collapse event. Jarosite, pyrite, alunite, and kaolinite occur in hydrothermally altered rock exposed in summit scarps formed by edifice collapse events and in altered rock within the east-west structural zone (EWSZ) of the volcano?s east flank. Deposits of the Osceola Mudflow contain clasts of variably altered and unaltered andesite within a clay-rich matrix. Minerals detected in samples from the edifice are also present in many of the clasts. The matrix includes abundant smectite, kaolinite and variably abundant jarosite. Hydrothermal fluid compositions calculated from hydrogen and oxygen isotope data of alunite, and smectite on Mount Rainier reflect mixing of magmatic and meteoric waters. The range in the dD values of modern meteoric water on the volcano (-85 to 155?) reflect the influence of elevation on the dD of precipitation. The d34S and d18OSO4 values of alunite, gypsum and jarosite are distinct but together range from 1.7 to 17.6? and -12.3 to 15.0?, respectively; both parameters increase from jarosite to gypsum to alunite. The variations in sulfur isotope composition are attributed to the varying contributions of disproportionation of magmatic SO2, the supergene oxidation of hydrothermal pyrite and possible oxidation of H2S to the parent aqueous sulfate. The 18OSO4 values of jarosite are the lowest recorded for the mineral, consistent with a supergene origin. The mineralogy and isotope composition of alteration minerals define two and possibly three environments of alteration. At deeper levels magmatic vapor, H2S, SO2 and other gases from venting magmas migrated upward and condensed into the meteoric water. Disproportionation of SO2 into aqueous sulfate and H2S resulted in acid-sulfate (alunite + kaolinite + pyrite) and related argillic and propylitic alteration envelopes in a magmatic hydrothermal environment. At shallow levels H2S reacted with andesite to form pyrite that is associated with smectite along fractures on both the flanks and upper edifice. It is not clear to what extent H2S was oxidized by atmospheric O2 to form aqueous sulfate in a steam-heated environment. Near the ground surface, pyrite is oxidized by atmospheric oxygen resulting in soluble iron-and aluminum-hydroxysulfates. These supergene hydroxysulfates, which may also form around fumaroles from the oxidation of H2S, are subject to continuous solution and redeposition.

Open-File Report↗

Soil CO 2 Flux in the Amargosa Desert, Nevada, during El Nino 1998 and La Nina 1999

Mean annual soil CO2 fluxes from normally bare mineral soil in the Amargosa Desert in southern Nevada, United States, measured with clear and opaque soil CO2-flux chambers (autochambers) were small - <5 millimoles per square meter per day - during both El Nino 1998 and La Nina 1999. The 1998 opaque-chamber flux exceeded 1999 opaque-chamber flux by an order of magnitude, whereas the 1998 clear-chamber flux exceeded 1999 clear-chamber flux by less than a factor of two. These data suggest that above-normal soil moisture stimulated increased metabolic activity, but that much of the extra CO2 produced was recaptured by plants. Fluxes from warm moist soil were the largest sustained fluxes measured, and their hourly pattern is consistent with enhanced soil metabolic activity at some depth in the soil and photosynthetic uptake of a substantial portion of the CO2 released. Flux from cool moist soil was smaller than flux from warm moist soil. Flux from hot dry soil was intermediate between warm-moist and cool-moist fluxes, and clear-chamber flux was more than double the opaque-chamber flux, apparently due to a chamber artifact stemming from a thermally controlled CO2 reservoir near the soil surface. There was no demonstrable metabolic contribution to the very small flux from cool dry soil, which was dominated by diffusive up-flux of CO2 from the water table and temperature-controlled CO2-reservoir up- and down-fluxes. These flux patterns suggest that transfer of CO2 across the land surface is a complex process that is difficult to accurately measure.

Scientific Investigations Report↗

Minerals produced during cooling and hydrothermal alteration of ash flow tuff from Yellowstone drill hole Y-5

A rhyolitic ash-flow tuff in a hydrothermally active area within the Yellowstone caldera was drilled in 1967, and cores were studied to determine the nature and distribution of primary and secondary mineral phases. The rocks have undergone a complex history of crystallization and hydrothermal alteration since their emplacement 600,000 years ago. During cooling from magmatic temperatures, the glassy groundmass underwent either devitrification to alkali feldspar + ??-cristobalite ?? tridymite or granophyric crystallization to alkali feldspar + quartz. Associated with the zones of granophyric crystallization are prismatic quartz crystals in cavities similar to those termed miarolitic in plutonic rocks. Vapor-phase alkali feldspar, tridymite, magnetite, and sporadic ??-cristobalite were deposited in cavities and in void spaces of pumice fragments. Subsequently, some of the vapor-phase alkali feldspar crystals were replaced by microcrystalline quartz, and the vapor-phase minerals were frosted by a coating of saccharoidal quartz. Hydrothermal minerals occur primarily as linings and fillings of cavities and fractures and as altered mafic phenocrysts. Chalcedony is the dominant mineral related to the present hydrothermal regime and occurs as microcrystalline material mixed with various amounts of hematite and goethite. The chalcedony displays intricate layering and was apparently deposited as opal from silica-rich water. Hematite and goethite also replace both mafic phenocrysts and vapor-phase magnetite. Other conspicuous hydrothermal minerals include montmorillonite, pyrite, mordenite, calcite, and fluorite. Clinoptilolite, erionite, illite, kaolinite, and manganese oxides are sporadic. The hydrothermal minerals show little correlation with temperature, but bladed calcite is restricted to a zone of boiling in the tuff and clearly was deposited when CO2 was lost during boiling. Fractures and breccias filled with chalcedony are common throughout Y-5 and may have been produced by rapid disruption of rock caused by sudden decrease of fluid pressure in fractures, most likely a result of fracturing during resurgent doming in this part of the Yellowstone caldera. The chalcedony probably was deposited as opal or ??-cristobalite from a pre-existing silica floc that moved rapidly into the fractures and breccias immediately after the sudden pressure drop. ?? 1978.

Journal of Volcanology and Geothermal Research↗

Relationship of atmospheric nitrogen deposition to soil nitrogen cycling along an elevation gradient in the Colorado Front Range

Microbial processing of atmospheric nitrogen (N) deposition regulates the retention and mobilization of N in soils, with important implications for water quality. Understanding the links between N deposition, microbial communities, N transformations, and water quality is critical as N deposition shifts toward reduced N and remains persistently high in many regions. Here, we investigated these connections along an elevation transect in the Colorado Front Range. Although rates of N deposition and pools of extractable N increased down the elevation transect, soil microbial communities and N transformation rates did not follow clear elevational patterns. The subalpine microbial community was distinct, corresponding to a high C:N ratio and low pH, while the microbial communities at the lower elevation sites were all very similar. Net nitrification, mineralization, and nitrification potential rates were highest at the Plains (1,700 m) and Montane (2,527 m) sites, suggesting that these ecosystems mobilize N. In contrast, the net immobilization of N observed at the Foothills (1,978 m) and Subalpine (3,015 m) sites suggests that these ecosystems retain N deposition. The contrast in N transformation rates between the plains and foothills, both of which receive elevated N deposition, may be due to spatial heterogeneity not captured in this study and warrants further investigation. Stream N concentrations from the subalpine to the foothills were consistently low, indicating that these soils are currently able to process and retain N deposition, but this may be disrupted if drought, wildfire, or land-use change alter the ability of the soils to retain N.

Colorado↗

Differential heat shock protein responses in two species of Pacific salmon and their utility in identifying heat stress

Rapid and accelerating warming of salmon habitat has the potential to lower productivity of Pacific salmon ( Oncorhynchus species) populations. Heat stress biomarkers can indicate where warming is most likely affecting fish populations; however, we often lack clear classifications that separate individuals with and without heat stress needed to make these tools operational. We conducted a heat exposure experiment with trials lasting 12 or 36 h using juvenile Chinook salmon ( Oncorhynchus tshawytscha ) and coho salmon ( Oncorhynchus kisutch ) to validate heat stress biomarkers in white muscle. Following habituation to 13°C, individuals were exposed to water temperatures that increased to 15°C, 17°C, 19°C, 21°C or 23°C. Heat shock protein 70 abundance (HSP70 measured by ELISA) and transcription of 13 genes (mRNA measured by qPCR) including three heat shock protein genes ( hsp70, hsp90, hsp27 ) were measured. A distinct heat stress response was apparent by 21°C in juvenile Chinook salmon and 23°C in juvenile coho salmon using HSP70. A threshold for heat stress classification in Chinook salmon of > 2 ng HSP70 mg .1 total protein identified heat stress in 100% of 21 and 23°C treated individuals compared to 4% in cooler treatments. For coho salmon, > 3 ng HSP70 mg .1 total protein identified heat stress in 100% of 23°C treated individuals compared to 4% in cooler treatments. Transcription from a panel of genes separated individuals between cooler and stressful temperature experiences (≥21°C for Chinook salmon and ≥23°C for coho salmon) with ~ 85% correct classification. Our findings indicate that juvenile Chinook salmon were more temperature-sensitive than juvenile coho salmon and support the use of a HSP70 threshold sampled from muscle for assessing heat stress in individual wild Pacific salmon with an option for non-lethal biopsies for spawning adults.

Conservation Physiology↗

Spawning behavior in Atlantic cod: analysis by use of data storage tags

Electronic data storage tags (DSTs) were implanted into Atlantic cod captured in Icelandic waters from 2002 to 2007 and the depth profiles recovered from these tags (females: n = 31, males: n = 27) were used to identify patterns consistent with published descriptions of cod courtship and spawning behavior. The individual periods of time that males spent exhibiting behavior consistent with being present in a spawning aggregation&mdash;i.e. periods consisting of a clear tidal signature in the DST depth profile associated with an individual remaining on or near the substrate&mdash;were longer than those of females. Over the course of a spawning season, male cod spent approximately twice the amount of time in spawning aggregations than females, but female cod visited more aggregations per unit time. On average, males participated in approximately 57% more putative spawning events, i.e. vertical ascents potentially corresponding to gamete release, than did females. However, males <85 cm total length participated in the same number of putative spawning events as females of comparable size. In both sexes, larger individuals and/or individuals that spent a longer period of time within an aggregation participated in a larger number of putative spawning events. Although further validation and refinement is necessary, particularly in the identification of spawning events, the ability offered by DSTs to quantify cod spawning behavior may aid in the development of management and conservation plans.

Marine Ecology Progress Series↗

Reappearance of deepwater sculpin in Lake Ontario: Resurgence or last gasp of a doomed population?

Deepwater sculpin ( Myoxocephalus thompsonii ) were abundant in Lake Ontario in the 1920s and at least common into the 1940s. By the 1960s they were rare and, thereafter, some considered the population extirpated even though a synoptic survey of the lake in 1972 produced three, relatively large (148&ndash;165 mm total length, TL), and presumably old, specimens from the northern half of the lake. Deepwater sculpin were absent from annual survey catches in the 1980s and did not reappear until 1996, when three were caught in northern Lake Ontario. Isolated collections of deepwater sculpin continued during 1998&ndash;2004. Catches during 1996&ndash;2004 included five smaller individuals, 89&ndash;118 mm TL. In 2005, catches increased sharply, with 18 deepwater sculpin collected from southern waters and one from northern waters. Moreover, young, small sculpin were dominant in 2005&mdash;16 of the 19 sculpins averaged 68 &plusmn; 12 mm total length (&plusmn; 1 s.d.). The young fish observed since 1996 could have originated from reproduction by the small in-lake population, from downstream drift of planktonic larvae from Lake Huron, or both. The presence of juveniles is a clear sign that conditions for survival of young deepwater sculpin are becoming more favorable, perhaps because of reduced abundance of alewife ( Alosa pseudoharengus ), a pelagic planktivore linked to depression of deepwater sculpin in Lake Michigan, and also low abundances of burbot ( Lota lota ) and lake trout ( Salvelinus namaycush ), benthic piscivores.

Journal of Great Lakes Research↗

The National Ocean Biodiversity Strategy

President Biden has been clear that the ocean is central to life on Earth. As he has proclaimed, “the ocean powers millions of jobs; feeds and sustains us; and is a rejuvenating source of inspiration, exploration, and recreation.” The Biden-Harris Administration has worked hard to fulfill the President’s goal to protect and conserve at least 30% of U.S. waters by 2030. The ocean faces increased threats from warming, overfishing, increased acidity, and loss of biodiversity. It is now more important than ever to sustain the many benefits that the ocean, coasts, and Great Lakes provide, including food, a favorable climate, recreation, physical and mental health, and for many, a sense of cultural identity. Ocean life represents an irreplaceable heritage, the foundation of a habitable planet, and a vast trove of resources. Keeping our ocean healthy requires reliable information on the changing status of these living organisms, the drivers of biodiversity change, and options for effectively addressing those drivers. Over 2 million species are estimated to live in the ocean, yet only about 240,000 species have been described by scientists. Most of the ocean’s benefits result from those diverse species interacting with one another and the environment they create. To protect and conserve the ocean, we as a nation need to make better use of existing knowledge and prioritize acquiring new biodiversity knowledge to enable better policy and management decisions. The ability to monitor ocean species and habitats has expanded dramatically over the past decade, with innovations in technology, genomics, taxonomy, big data management and sharing, artificial intelligence, and machine learning. Yet large fractions of the U.S. ocean remain almost unknown. The National Ocean Biodiversity Strategy (strategy) reflects the urgent need to leverage these advances. The goals of this strategy must be guided by the nation’s diverse voices and ways of knowing, in order to maximize effective and equitable stewardship of the ocean’s diverse life and its benefits to people. The strategy is intended as a guiding document for government to advance three overarching goals: ● Goal 1: Drive delivery of ocean biodiversity knowledge at the national scale. Objectives include developing an Implementation Plan for achieving the strategy’s three goals; establishing a coordination mechanism to manage the implementation; and documenting gaps in biodiversity knowledge and the benefits of ocean biodiversity to people and economies. ● Goal 2: Strengthen tools and institutions to deliver ocean biodiversity knowledge. Objectives include establishing a robust information pipeline to support indicators and dynamic maps of ocean biodiversity, from the coasts to the deep sea. This pipeline should include expanded observing systems and comprehensive data management; science and technology solutions to accelerate the availability of biodiversity information; and plans to leverage previous investments to rebuild and expand the nation’s human capital and infrastructure to sustain foundational taxonomy and biodiversity science. ● Goal 3: Protect, conserve, restore, and sustainably use ocean biodiversity. Objectives include expanding the collection, delivery, and use of biodiversity knowledge to inform actions that advance ocean protection, conservation, restoration, and sustainable development. Government should lead in establishing and incentivizing diverse partnerships across scales and sectors to implement those actions and should educate and involve the public to discover and value the nation’s diverse ocean life. Achieving these goals will require commitments across society: new federal and private investments, coordination across sectors to address climate and equity challenges, and engagement of Indigenous Knowledge holders and frontline communities as full partners throughout planning and implementation. The Subcommittee on Ocean Science and Technology (SOST) IWG-Biodiversity will begin developing an Implementation Plan to describe and direct specific actions to implement the strategy. Successful implementation of the strategy will harmonize and expand collection and delivery of timely knowledge on ocean life to all of society. The strategy will also enable evidence-based management and protection of the ocean. Advancing the strategy will build human and institutional capital and partnerships that support both existing mandates and new needs to rebuild and sustain biodiversity, achieve healthy ocean ecosystems, and manage living resources. Implementing the strategy will deliver knowledge for monitoring, modeling, forecasting, and assessments that support food security, public health, and cultural values, and that more effectively protect, conserve, and restore nature.

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A workshop model simulating fate and effect of drilling muds and cuttings on benthic communities

Oil and gas exploration and production at marine sites has generated concern over potential environmental impacts resulting from the discharge of spent drilling muds and cuttings. This concern has led to a broad array of publicly and privately sponsored research. This report described a cooperative modeling effort designed to focus information resulting from this research through construction of explicit equations that simulate the potential impacts of discharge drilling fluids (muds) and cuttings on marine communities. The model is the result of collaboration among more than 30 scientists. The principal cooperating organizations were the E.S. Environmental Protection Agency, the U.S. Minerals Management Service, the Offshore Operators Committee, and the Alaska Oil and Gas Association. The overall simulation model can be conceptualized as three connected submodels: Discharge and Plume Fate, Sediment Redistribution, and Benthic Community Effects. On each day of simulation, these submodels are executed in sequence, with flows of information between submodels. The Benthic Community Effects submodel can be further divided into sections that calculate mortality due to burial, mortality due to toxicity, mortality due to resuspension disturbance, and growth of the community. The model represents a series of seven discrete 1-m 2 plots at specified distances along a transect in one direction away from a discharge point. It consists of coupled difference equations for which parameter values can easily be set to evaluate different conditions or to examine the sensitivity of output to various assumptions. Sets of parameter values were developed to represent four general cases or scenarios: (1) a shallow (5 m), cold environment with ice cover during a substantial fraction of the year, such as might be encountered in the Beaufort Sea, Alaska; (2) a shallow (20 m), temperate environment, such as might be encountered in the Gulf of Mexico; (3) a deeper (80 m), temperate environment, such as might be encountered in the Gulf of Mexico; and (4) a very deep (1,000 m) environment, such as might be encountered on the Atlantic slope. The focus of the modeling effort was on the connection of a reasonable representation of physical fate to the biological responses of populations, rather than on highly detailed representations of individual processes. For example, the calculations of physical fate are not as detailed as those in the recently published model of Brandsma et al. (1983). The value of the model described herein is in the broad scope of processes that are explicitly represented and linked together. The model cannot be considered to produce reliable predictions of the quantitative impacts of discharged drilling fluids and cuttings on biological populations at a particular site. Limitations of the model in predicting integrated fate and effects can be traced to three general areas: level of refinement of the algorithms used in the model; lack of understanding of the processes determining fate and effects; and parameter and data values. Despite the limitations, several qualitative conclusions concerning both potential impacts and the importance of various remaining data gaps can be drawn from the modeling effort. These include: (1) Simple, unequivocal conclusions about fate and effects across geographical regions and drilling operations are difficult, if not misleading, due to the large amount of variability in characteristics of discharged materials (e.g., oil content and toxicity), discharge conditions (e.g., duration of drilling operations), physical environments (e.g., water depth, current direction, and sediment disturbance regimes), and biological communities (e.g., intrinsic growth rates). Different combinations of these characteristics can result in substantial differences in simulated environmental fate and biological effects. For examples, simulated recovery in some high-energy environments occurs within months after the cessation of discharge operations, even at heavily impacted sites, whereas simulated recover in some low-energy environments takes years at heavily impacted sites. <2) Considerable difficulties remain in the reliable extrapolation of results from laboratory toxicity experiments to predictions of population effects in the field. (3) The volume of material discharged and duration of operations in the production drilling operations simulated by the model are sufficient to produce substantial simulated biological impacts at some plots, both in terms of differences from a control plot during the period of discharge operations, and in terms of the recovery period following the perturbations. Evaluation of the significance of potential effects involves the following factors: • Definition of a specific spatial and temporal reference frame (e.g., What is the natural variation? Is 1 year to be considered a "long" or "short" time? Is 50 m to be considered a "large" or "trivial" distance? • Consideration of rare or unique resources and particularly sensitive biotic assemblages. • Consideration of the potential for long term, cumulative effects. Some of these aspects are clearly beyond the scope of this modeling efforts (e.g., the model does not simulate the long term fate of resuspended material). The model does, however, contain an internal "reference frame" by comparison to simulated behavior at a control plot. The model, in general, simulates substantial "natural" variation at the reference or control plots, both over time, due to sediment disturbance events in medium to high energy environments, and over space, due to geographically varying conditions, such as water depth and current regime.

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