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Environmental Setting of the Lower Merced River Basin, California

In 1991, the U.S. Geological Survey began to study the effects of natural and anthropogenic influences on the quality of ground water, surface water, biology, and ecology as part of the National Water-Quality Assessment (NAWQA) Program. As part of this program, the San Joaquin-Tulare Basins study unit is assessing parts of the lower Merced River Basin, California. This report provides descriptions of natural and anthropogenic features of this basin as background information to assess the influence of these and other factors on water quality. The lower Merced River Basin, which encompasses the Mustang Creek Subbasin, gently slopes from the northeast to the southwest toward the San Joaquin River. The arid to semiarid climate is characterized by hot summers (highs of mid 90 degrees Fahrenheit) and mild winters (lows of mid 30 degrees Fahrenheit). Annual precipitation is highly variable, with long periods of drought and above normal precipitation. Population is estimated at about 39,230 for 2000. The watershed is predominately agricultural on the valley floor. Approximately 2.2 million pounds active ingredient of pesticides and an estimated 17.6 million pounds active ingredient of nitrogen and phosphorus fertilizer is applied annually to the agricultural land.

Scientific Investigations Report↗

Annual Report for 2003 Wild Horse Research and Field Activities

As stated in the Wild Horse Fertility Control Field Trial Plan, the Bureau of Land Management (BLM) has an immediate need for a safe, effective contraceptive agent to assist in the management of the large number of wild horses on western rangelands. The BLM and the U.S. Geological Survey-Biological Resources Discipline (USGS/BRD) are testing the immunocontraceptive agent Porcine Zonae Pellucida (PZP) in field trials with three free-roaming herds of western wild horses. Extensive research has already been conducted on the safety, efficacy, and duration of PZP applications in both domestic and feral horses on eastern barrier islands and in some select trials I with wild horses in Nevada managed by the BLM. However, significant questions remain concerning the effects of I PZP application at the population level in the wild, as well as effects at the individual level on behavior, social structure, and harem dynamics of free-ranging animals. These questions are best answered with field trials on wild horse herds under a tight research protocol. The ultimate goal is to provide the BLM with the protocols and information necessary to begin using fertility control to regulate population growth rates in wild horse herds on a broader scale. Fertility control is intended to assist the conventional capture, removal, and adoption process as a I means of controlling excess numbers of wild horses and burros, and to greatly reduce the adoption costs and numbers of animals handled. Fertility control is not intended to totally replace the removal and adoption process. The USGSIBRD began assisting the BLM with field trials of immunocontraceptive fertility control of wild horses in early 2001. The first PZP treatments were applied during gathers at the Pryor Mountain Wild Horse Range in September 2001, and the Little Book Cliffs Wild Horse Range, Colorado, in July 2002. At those gathers, 5 horses were treated in the Pryor Mountain WHR, and 23 were treated in the Little Book Cliffs WHR with PZP. These initial treatments were followed by booster injections in 2002. The second injection is required in order to raise, and I maintain, the titer levels of mares high enough to be considered contracepted. By the end of 2002, 13 horses on the Pryor Mountain WHR had received both injections, as had 11 horses in the Little Book Cliffs WHR. In 2003, intensive research efforts were carried out by the USGSIBRD at three field locations; Pryor Mountain WHR, Little I Book Cliffs WHR, and McCullough Peaks Wild Horse Management Area. The work at these sites during this I calendar year included treatment of wild horse mares with PZP in the Pryor herd and Little Book Cliffs herd, development and implementation of behavioral research to investigate potential affects of PZP treatment, continued tracking of demography and foal production in all three herds, and early phases of investigating aerial population estimation survey techniques. Detailed descriptions of these research topics can be found in the Wild Horse and Burro Management Strategic Research Plan and the Wild Horse Fertility Control Field Trial Plan. Field work in 2003 was conducted by USGSIBRD and BLM staff with the assistance of many dedicated individuals. See I Acknowledgments for more details. This report is meant to highlight the activities of the 2003 field season, as well as to provide a general overview of the data collected. More in-depth data analysis will be conducted following the conclusion of each I phase of the research project, and in many cases will not be possible until several seasons of data are collected.

Open-File Report↗

U.S. Geological Survey energy and wildlife research annual report for 2018

USGS scientists provide scientific information and options that land and resource managers and private industries can use to make decisions regarding the development of energy resources while protecting the health of ecosystems. Studies focus on delivering information to avoid, minimize, or mitigate the impacts of energy infrastructure on fish and wildlife. USGS scientists are currently developing mapping tools and models that identify areas of biological strengths and weaknesses or high- and low-quality habitat and can identify opportunities for conservation—areas of high-quality habitat where energy-generating potential is low—and areas of potential risk—areas of high-quality habitat where energy-generating potential is high. These tools can assist resource managers and the industry concerning siting of energy development and selection of off-site mitigation areas. Scientific efforts, such as these, further the understanding of impacts related to energy development and create workable solutions. The three goals guiding USGS activities related to the interactions between wildlife and energy development are to understand risks by identifying when, where, and how fish and wildlife share space with energy facilities, measure direct and indirect impacts to species, and inform feasible and cost-effective solutions to minimize impacts through technological fixes, management, and mitigation.

Circular↗

Vegetation classification and distribution mapping report: Mesa Verde National Park

The classification and distribution mapping of the vegetation of Mesa Verde National Park (MEVE) and surrounding environment was achieved through a multi-agency effort between 2004 and 2007. The National Park Service’s Southern Colorado Plateau Network facilitated the team that conducted the work, which comprised the U.S. Geological Survey’s Southwest Biological Science Center, Fort Collins Research Center, and Rocky Mountain Geographic Science Center; Northern Arizona University; Prescott College; and NatureServe. The project team described 47 plant communities for MEVE, 34 of which were described from quantitative classification based on f eld-relevé data collected in 1993 and 2004. The team derived 13 additional plant communities from field observations during the photointerpretation phase of the project. The National Vegetation Classification Standard served as a framework for classifying these plant communities to the alliance and association level. Eleven of the 47 plant communities were classified as “park specials;” that is, plant communities with insufficient data to describe them as new alliances or associations. The project team also developed a spatial vegetation map database representing MEVE, with three different map-class schemas: base, group, and management map classes. The base map classes represent the fi nest level of spatial detail. Initial polygons were developed using Definiens Professional (at the time of our use, this software was called eCognition), assisted by interpretation of 1:12,000 true-color digital orthophoto quarter quadrangles (DOQQs). These polygons (base map classes) were labeled using manual photo interpretation of the DOQQs and 1:12,000 true-color aerial photography. Field visits verified interpretation concepts. The vegetation map database includes 46 base map classes, which consist of associations, alliances, and park specials classified with quantitative analysis, additional associations and park specials noted during photointerpretation, and non-vegetated land cover, such as infrastructure, land use, and geological land cover. The base map classes consist of 5,007 polygons in the project area. A field-based accuracy assessment of the base map classes showed overall accuracy to be 43.5%. Seven map classes comprise 89.1% of the park vegetated land cover. The group map classes represent aggregations of the base map classes, approximating the group level of the National Vegetation Classification Standard, version 2 (Federal Geographic Data Committee 2007), and reflecting physiognomy and floristics. Terrestrial ecological systems, as described by NatureServe (Comer et al. 2003), were used as the fi rst approximation of the group level. The project team identified 14 group map classes for this project. The overall accuracy of the group map classes was determined using the same accuracy assessment data as for the base map classes. The overall accuracy of the group representation of vegetation was 80.3%. In consultation with park staff , the team developed management map classes, consisting of park-defined groupings of base map classes intended to represent a balance between maintaining required accuracy and providing a focus on vegetation of particular interest or import to park managers. The 23 management map classes had an overall accuracy of 73.3%. While the main products of this project are the vegetation classification and the vegetation map database, a number of ancillary digital geographic information system and database products were also produced that can be used independently or to augment the main products. These products include shapefiles of the locations of field-collected data and relational databases of field-collected data.

Mesa Verde National Park↗

Rainfall, Streamflow, and Water-Quality Data During Stormwater Monitoring, Halawa Stream Drainage Basin, Oahu, Hawaii, July 1, 2006 to June 30, 2007

Storm runoff water-quality samples were collected as part of the State of Hawaii Department of Transportation Stormwater Monitoring Program. This program is designed to assess the effects of highway runoff and urban runoff on Halawa Stream. For this program, rainfall data were collected at two stations, continuous streamflow data at three stations, and water-quality data at five stations, which include the two continuous streamflow stations. This report summarizes rainfall, streamflow, and water-quality data collected between July 1, 2006 and June 30, 2007. A total of 13 samples was collected over two storms during July 1, 2006 to June 30, 2007. The goal was to collect grab samples nearly simultaneously at all five stations and flow-weighted time-composite samples at the three stations equipped with automatic samplers. Samples were analyzed for total suspended solids, total dissolved solids, nutrients, chemical oxygen demand, and selected trace metals (cadmium, chromium, copper, lead, nickel, and zinc). Additionally, grab samples were analyzed for oil and grease, total petroleum hydrocarbons, fecal coliform, and biological oxygen demand. Quality-assurance/quality-control samples were also collected during storms and during routine maintenance to verify analytical procedures and check the effectiveness of equipment-cleaning procedures.

Open-File Report↗

SICS: the Southern Inland and Coastal System interdisciplinary project of the USGS South Florida Ecosystem Program

State and Federal agencies are working jointly on structural modifications and improved water-delivery strategies to reestablish more natural surface-water flows through the Everglades wetlands and into Florida Bay. Changes in the magnitude, duration, timing, and distribution of inflows from the headwaters of the Taylor Slough and canal C-111 drainage basins have shifted the seasonal distribution and extent of wetland inundation, and also contributed to the development of hypersaline conditions in nearshore embayments of Florida Bay. Such changes are altering biological and vegetative communities in the wetlands and creating stresses on aquatic habitat. Affected biotic resources include federally listed species such as the Cape Sable seaside sparrow, American crocodile, wood stork, and roseate spoonbill. The U.S. Geological Survey (USGS) is synthesizing scientific findings from hydrologic process studies, collecting data to characterize the ecosystem properties and functions, and integrating the results of these efforts into a research tool and management model for this Southern Inland and Coastal System(SICS). Scientists from all four disciplinary divisions of the USGS, Biological Resources, Geology, National Mapping, and Water Resources are contributing to this interdisciplinary project.

Florida↗

What is the Ohio Gap Analysis Program (GAP)?

The Gap Analysis Program (GAP) is a program for identifying the degree to which native species and natural communities are represented in present-day conservation lands. Those areas where unique biological communities and conservation lands do not overlap constitute gaps in our conservation effort. GAP aids in the protection of biodiversity through a regional assessment of the conservation status of native species and natural land-cover types. This assessment provides a practical approach based on available data to identify potential conservation areas and strategies. GAP is a preliminary step to the more focused, local studies needed to establish boundaries for potential biodiversity management areas. GAP is conducted as state-level projects and is coordinated by the U.S. Geological Survey (USGS) Biological Resources Discipline (BRD). It is a cooperative effort among regional, state, and Federal agencies and private groups.

Ohio↗

Science to Help Understand and Manage Important Ground-Water Resources

Throughout California, as pressure on water resources continues to grow, water-supply agencies are looking to the state?s biggest ?reservoir? ? its ground-water basins ? for supply and storage. To better utilize that resource, the Sweetwater Authority and other local partners, including the city of San Diego and Otay Water Districts, are working with the U.S. Geological Survey (USGS) to develop the first comprehensive study of the coastal ground-water resources of southern San Diego County. USGS research is providing the integrated geologic and hydrologic knowledge necessary to help effectively utilize this resource on a coordinated, regional basis. USGS scientists are building a real-time well-monitoring network and gathering information about how the aquifers respond to different pumping and recharge-management strategies. Real-time ground-water levels are recorded every hour and are viewable on a project web site (http://ca.water.usgs.gov/sandiego/index.html). Data from the wells are helping to define the geology and hydrogeology of the area, define ground-water quality, and assess ground-water levels. The wells also are strategi-cally placed and designed to be usable by the local agencies for decades to come to help manage surface-water and ground-water operations. Additionally, the knowledge gained from the USGS study will help local, state, and federal agencies; water purveyors; and USGS scientists to understand the effects of urbanization on the local surface-water, ground-water, and biological resources, and to better critique ideas and opportuni-ties for additional ground-water development in the San Diego area.

Fact Sheet↗

Surface- and ground-water quality data at selected landfill sites in Mecklenburg County, North Carolina, 1980-86

The U.S. Geological Survey initiated an urban water quality study in 1979 in cooperation with the City of Charlotte and Mecklenburg County, North Carolina, to study, among other things, the effects of solid waste disposal on the water quality in Mecklenburg County. Water quality samples (747 inorganic and 168 organic) were collected at 20 surface water sites and 53 monitoring wells at four selected landfills from 1980 to 1986. Samples were analyzed for 142 selected physical and biological parameters, major ions, nutrients, trace metals, and (or) organic compounds. Results from all analyses are presented in tabular form in the appendices. Each appendix is divided into a surface water and a groundwater section. Within each water quality table the data is presented in the following order: field measurements, physical properties, biological constituents (if analyzed), major cations, major anions, dissolved and total solids, nutrients, trace inorganic constituents, and organic constituents.

North Carolina↗

Life history traits and habitat needs of the redhead

Redheads are one of five common diving duck species in North America. They are in the same taxonomic group as the pochards or bay ducks and are most similar in appearance and behavior to the canvasback. Smaller body size, late breeding, wintering in southern areas, and tolerance to salt in winter and in breeding areas differentiate the redhead from the canvasback and suggest an evolutionary origin in the arid areas of the West. Parasitism of other waterfowl nests is more pronounced in redheads than in other North American waterfowl. These and other aspects of the biology of the redhead are the subject of this leaflet. Readers who are interested in general references on redheads.

Fish and Wildlife Leaflet↗

The scientific bases for preservation of the Mariana crow

The Panel recently released the report and recommendations resulting from its work over the last six months. Although primarily focused on the Mariana Crow, the report highlights that this is a matter potentially far more serious than the preservation of the crow on Guam and Rota. The report includes major sections dealing with the need to intensify research and control activities on the Brown Tree Snake both on Guam and in all appropriate areas to which the snake could spread if uncontained and on the population biology and behavior of the Mariana Crow on Guam and Rota.

Book↗

Water-quality, bed-sediment, and biological data (October 2010 through September 2011) and statistical summaries of data for streams in the Clark Fork basin, Montana

Water, bed sediment, and biota were sampled in streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork basin of western Montana; additional water samples were collected from near Galen to near Missoula at select sites as part of a supplemental sampling program. The sampling program was conducted by the U.S. Geological Survey in cooperation with the U.S. Environmental Protection Agency to characterize aquatic resources in the Clark Fork basin, with emphasis on trace elements associated with historic mining and smelting activities. Sampling sites were located on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2010 through September 2011. Bed-sediment and biota samples were collected once at 14 sites during August 2011. This report presents the analytical results and quality-assurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2010 through September 2011. Water-quality data include concentrations of selected major ions, trace elements, and suspended sediment. Turbidity was analyzed for water samples collected at the four sites where seasonal daily values of turbidity were being determined. Daily values of suspended-sediment concentration and suspended-sediment discharge were determined for four sites. Bed-sediment data include trace-element concentrations in the fine-grained fraction. Biological data include trace-element concentrations in whole-body tissue of aquatic benthic insects. Statistical summaries of water-quality, bed-sediment, and biological data for sites in the upper Clark Fork basin are provided for the period of record since 1985.

Montana↗

Surface-water and climatological data, Salt Lake County, Utah, water year 1980

This report presents streamflow, water-quality, precipitation, and storm-runoff data collected in Salt Lake County, Utah, during the 1980 water year and certain water-quality data for the 1979 water year which were included for comparative purposes. Surface-water data consist of daily mean values of flow at 33 sites on natural streams, canals, and conduits. Water-quality data consist of chemical, biologic, and sediment analyses at 30 sites. Precipitation data consist of daily and monthly total at nine sites. Storm-runoff data consist of 5 and 15-minute interval discharge data for storms of July 1-2, August 19, and August 25, 1980, for most surface-water sites.

Utah↗

Water-quality, bed-sediment, and biological data (October 2014 through September 2015) and statistical summaries of data for streams in the Clark Fork Basin, Montana

Water, bed sediment, and biota were sampled in selected streams from Butte to near Missoula, Montana, as part of a monitoring program in the upper Clark Fork Basin of western Montana. The sampling program was led by the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, to characterize aquatic resources in the Clark Fork Basin, with emphasis on trace elements associated with historic mining and smelting activities. Sampling sites were located on the Clark Fork and selected tributaries. Water samples were collected periodically at 20 sites from October 2014 through September 2015. Bed-sediment and biota samples were collected once at 13 sites during August 2015. This report presents the analytical results and quality-assurance data for water-quality, bed-sediment, and biota samples collected at sites from October 2014 through September 2015. Water-quality data include concentrations of selected major ions, trace elements, and suspended sediment. At 12 sites, samples for analysis of dissolved organic carbon and turbidity were collected. In addition, samples for analysis of nitrogen (nitrate plus nitrite) were collected at two sites. Daily values of mean suspended-sediment concentration and suspended-sediment discharge were determined for three sites. Seasonal daily values of turbidity were determined for four sites. Bed-sediment data include trace-element concentrations in the fine-grained fraction. Biological data include trace-element concentrations in whole-body tissue of aquatic benthic insects. Statistical summaries of water-quality, bed-sediment, and biological data for sites in the upper Clark Fork Basin are provided for the period of record.

Montana↗