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Ecological Investigations of the Federally Endangered Shivwits Milk-Vetch (Astragalus ampullarioides)--2006 Annual Report

Astragalus ampullarioides (Welsh) Welsh, the Shivwits milk-vetch, is an herbaceous perennial legume that was listed as federally endangered in September 2001. Known populations of this edaphic endemic species are restricted to Washington County, Utah, with the majority of occurrences found on gently sloping outcrops of the Triassic Petrified Forest Member of the Chinle Formation at the edge of the Mojave Desert. At the time of listing in 2001, surveys estimated a total of 1000 individuals for the species. In April-May 2006, surveys estimated approximately 4205 individuals distributed among six populations. Of the total number of individuals estimated in spring 2006, over 75 percent were distributed among three subpopulations in Zion National Park and approximately 60 percent occurred at a single 0.3-ha site in the Park. In addition to small population sizes and limited geographic distributions, the species is threatened to varying degrees by urbanization, livestock grazing, off-road vehicle use, and invasive exotic plants. In April 2006, the U.S. Geological Survey (USGS) initiated ecological investigations of the Shivwits milk-vetch to support conservation management and recovery of the species by the National Park Service (NPS; Zion National Park), the U.S. Fish and Wildlife Service (USFWS), the Bureau of Land Management (BLM), the Shivwits Band of the Paiute Tribe, and other cooperators such as The Nature Conservancy of Utah (TNC). To date, funding for this research has been provided by the Southwest Biological Science Center of the USGS Biological Resources Discipline, the USGS-NPS Park-Oriented Biological Support Project, and the Earth Surface Dynamics Program of the USGS Geologic Discipline. Additional logistical support has been provided by the Bureau of Land Management, Grand Staircase-Escalante National Monument. General objectives of this research are (1) to develop a better understanding of species-environment relations to support habitat modelling, future surveys for additional recovery populations, and potential efforts to establish new recovery populations; and (2) to evaluate effects of invasive exotic plants on habitat conditions and measures of milk-vetch performance. Specific objectives are to: Describe the distribution and abundance of milk-vetch populations and associated invasive exotic plant species within and outside of Zion National Park (Zion NP) in relation to geologic / geomorphic setting, soil properties, and plant community composition. In a field setting in Zion NP, conduct experiments to evaluate effects of invasive exotic plants on reproductive output and seedling establishment of A. ampullarioides across a gradient of exotic species biomass. Conduct greenhouse studies and analyze soils to evaluate effects of invasive exotic plants on soil biological properties (including mycorrhizal inocculation potential) that affect cycling and plant uptake of essential mineral nutrients. Based on environmental characteristics of known population locations, use Geographic Information System (GIS) tools to prepare a predictive habitat model that can be used to guide future surveys and efforts to evaluate sites for reintroduction efforts. This report describes 2006 progress and future plans for achieving these four objectives.

Open-File Report↗

Mercury speciation in the Mt. Amiata mining district (Italy): interplay between urban activities and mercury contamination

A fundamental step to evaluate the biogeochemical and eco-toxicological significance of Hg dispersion in the environment is to determine speciation of Hg in solid matrices. In this study, several analytical techniques such as scanning electron microscopy-energy dispersive X-ray spectroscopy (SEM-EDS), sequential chemical extractions (SCEs), and X-ray absorption spectroscopy (XANES) were used to identify Hg compounds and Hg speciation in samples collected from the Mt. Amiata Hg mining district, southern Tuscany, Italy. Different geological materials, such as mine waste calcine (retorted ore), soil, stream sediment, and stream water suspended particulate matter were analyzed. Results show that the samples were generally composed of highly insoluble Hg compounds such as sulphides (HgS, cinnabar and metacinnabar), and more soluble Hg halides such as those associated with the mosesite group. Other moderately soluble Hg compounds, HgCl 2 , HgO and Hg 0 , were also identified in stream sediments draining the mining area. The presence of these minerals suggests active and continuous runoff of soluble Hg compounds from calcines, where such Hg compounds form during retorting, or later in secondary processes. Specifically, we suggest that, due to the proximity of Hg mines to the urban center of Abbadia San Salvatore, the influence of other anthropogenic activities was a key factor for Hg speciation, resulting in the formation of unusual Hg-minerals such as mosesite.

Tuscany↗

Composition of tidal flat sediments, Willapa Bay, Washington

The purpose of this study was to characterize the modern sediments of sandy tidal flats in Willapa Bay, Washington based on their composition. Generally, clay comprises less than five percent of the sediment. Clay content increases upslope and up-estuary. Principal clay minerals are montmorillanite, illite, and chlorite; two clay mineral suites are present: (1) muddy flat suite with clay containing 44% montmorillonite, and (2) sandy flat suite with clay composition of 88% montmorillonite. Heavy minerals make up approximately four percent of the tidal flat sediment. Distribution of heavy minerals reflect their source with (1) heavy minerals most abundant near the beach on flats to the north where they were eroded out of terrace deposits, and (2) relatively greater heavy mineral concentrations (supplied by the Naselle River) across the entire flat to the south. The composition of the heavy mineral suite is mainly clinopyroxene, orthopyroxene, hornblende, epidote, and opaque minerals. This mineral suite represents several sources including rivers, ocean and ocean beaches, and reworked local Tertiary and Quaternary deposits. Tidal flat sediments are approximately 90% light minerals, mostly quartz. The light fraction also contains small quantities of lithic fragments, pumice, vegetation, and biogenic shell fragments. Tertiary and Quaternary terrace deposits are the major source of most of the light material. Fossils make up less than one percent of the bottom sediment. Two foram assemblages are present: (1) a modern shallow-water assemblage characterized by Trochammina inflata, found mainly in muddy flats near rivers, and (2) a relic deep-water assemblage (Eocene to Cretaceous) characterized by such species as Bathysiphon and Cyclammina found predominantly on the sandy flats. Macrofossils consists of shells of the modern tidal flat mollusc assemblage. Organic sediments were mostly carbon (1%). The highest concentrations of organic carbon are associated with muddy sediments near the Palix River and Pickernell Creek; overall, organic carbon concentration increased up-estuary. C/N ratios are transitional between open marine environments and marsh deposits of estuaries.

Washington↗

Sulfate threshold target to control methylmercury levels in wetland ecosystems

Sulfate contamination has a significant environmental implication through the stimulation of toxic hydrogen sulfide and methylmercury (MeHg) production. High levels of MeHg are a serious problem in many wetland ecosystems worldwide. In the Florida Everglades, it has been demonstrated that increasing MeHg occurrence is due to a sulfate contamination problem. A promising strategy of lowering the MeHg occurrence is to reduce the amount of sulfate entering the ecosystem. High surface water sulfate concentrations in the Everglades are mainly due to discharges from the Everglades Agricultural Area (EAA) canals. Water and total sulfur mass balances indicated that total sulfur released by soil oxidation, Lake Okeechobee and agricultural application were the major sources contributing 49,169, 35,217 and 11,775mtonsyear-1, respectively. Total sulfur loads from groundwater, levees, and atmospheric deposition contributed to a lesser extent: 4055; 5858 and 4229mtonsyear-1, respectively. Total sulfur leaving the EAA into Water Conservation Areas (WCAs) through canal discharge was estimated at 116,360mtonsyear-1, and total sulfur removed by sugarcane harvest accounted for 23,182mtonsyear-1. Furthermore, a rise in the mineral content and pH of the EAA soil over time, suggested that the current rates of sulfur application would increase as the buffer capacity of the soil increases. Therefore, a site specific numeric criterion for sulfate of 1mgL-1 was recommended for the protection of the Everglades; above this level, mercury methylation is enhanced. In parallel, sulfide concentrations in the EAA exceeded the 2??gL-1 criterion for surface water already established by the U.S. Environmental Protection Agency (EPA). ?? 2011 Elsevier B.V.

Science of the Total Environment↗

A lithologic-tectonic framework for the metallogenic provinces of California

The lithologic-tectonic framework of California developed principally during Mesozoic time when various terranes of oceanic crust and island-arc crust were accreted to older sialic crust, resulting in westward growth of the continent. Emplacement of great batholithic masses of granitoid rocks cutting all these crustal types also took place during the Mesozoic period. The discrete tectonostratigraphic terranes that resulted from these events and subsequent Tertiary and Quaternary volcanic events are characterized by specific types of metallic mineral deposits or, in some terranes, by the virtual absence of deposits. Lead-silver-zinc replacement-type deposits are common in the Paleozoic carbonate terrane in the eastern part of the state and occur sporadically elsewhere in the miogeoclinal and cratonal terranes but are absent from the oceanic and island-arc terranes. The vast majority of contact metasomatic tungsten deposits, including all the large ones, are in pendants of miogeoclinal rocks in the Sierra Nevada batholith, but the important Atolia deposits reside in granitoid rocks that invade oceanic terrane. Molybdenum distribution closely follows that of tungsten. All the large contact metasomatic iron deposits in California are in craton and miogeoclinal terranes, but sparse small deposits of this type also occur in island-arc terranes of the northern Sierra Nevada and eastern Klamath Mountains. Lode gold deposits, although widely scattered, show a marked preference for oceanic and island-arc terranes that have been invaded by granitoid plutons. All the major deposits, including late Tertiary bonanza deposits such as Bodie, are in such terranes. It appears that magmatic processes were responsible for mobilizing and transporting the gold, but the metal was perhaps derived from the eugeosynclinal rocks, notably the mafic volcanics. Most mercury deposits are found in the Coast Ranges, where they commonly occur in silica-carbonate rock, an alteration product of serpentinite. The deposits appear to be spatially related to the Coast Range thrust, and the source of the mercury may have been sedimentary rocks of the underlying Franciscan assemblage. Epigenetic mineralization occurred at several different times during the Mesozoic, and again during Miocene and Pliocene time. The timing of mineralization events and the distribution of various deposit types indicate that no broad-scale zoning of epigenetic deposits exists around the Sierra Nevada batholith.Syngenetic deposits are represented mainly by massive sulfides, chert-associated manganese, and chromite. The massive sulfide deposits, with one exception, are restricted to island-arc terranes, and nearly all of these deposits are in silicic volcanic rocks. They are interpreted to be syngenetic with the enclosing rocks, although some redistribution of metals may have occurred after the original deposition. The deposits occur in volcanic sequences of at least five different ages ranging from Early Devonian to Late Jurassic or Early Cretaceous and, along with their enclosing rocks, were probably formed at some distance from their present sites. Chert-associated manganese deposits occur mainly in exotic blocks of oceanic crust in melange and probably formed in fairly deep ocean environments. Chromite is confined to ultramafic rock, much of which occupies suture zones separating various accreted terranes.

Economic Geology↗

Wildfire-driven changes in hydrology mobilize arsenic and metals from legacy mine waste

Wildfires burning in watersheds that have been mined and since revegetated pose unique risks to downstream water supplies. A wildfire near Boulder, Colorado that burned a forested watershed recovering from mining disturbance that occurred 80-160 years ago allowed us to 1) assess arsenic and metal contamination in streams draining the burned area for a five-year period after the wildfire and 2) determine the fire-affected hydrologic drivers that convey arsenic and metals to surface water. Most metal concentrations were low in the circumneutral waters draining the burned area. Water and sediment collected from streams downstream of the burned area had elevated arsenic concentrations during and after post-fire storms. Mining-related deposits were the main source of arsenic to streams. An increased proportion of overland flow relative to infiltration after the fire mobilized arsenic- and metal- rich surface deposits and wildfire ash into streams within and downstream of the burned area. The deposition of this sediment into stream channels resulted in the remobilization of arsenic for the five-year post-fire study period. It is also possible that enhanced subsurface flow after the fire increased contact of water with arsenic-bearing minerals exposed in underground mine workings. Other studies have reported that wildfire ash can be an important source of arsenic and metals to surface waters, but wildfire ash was not an important source of arsenic in this study. Predicted increases in frequency, size, and intensity of wildfires in the western U.S., a region with widely dispersed historical mines, suggest that the intersection of legacy mining and post-wildfire hydrologic response poses an increasing risk for water supplies.

Colorado↗

Ultra-deep oxidation and exotic copper formation at the late pliocene boyongan and bayugo porphyry copper-gold deposits, surigao, philippines: Geology, mineralogy, paleoaltimetry, and their implications for Geologic, physiographic, and tectonic controls

The Boyongan and Bayugo porphyry copper-gold deposits are part of an emerging belt of intrusion-centered gold-rich deposits in the Surigao district of northeast Mindanao, Philippines. Exhumation and weathering of these Late Pliocene-age deposits has led to the development of the world's deepest known porphyry oxidation profile at Boyongan (600 m), and yet only a modest (30-70 m) oxidation profile at adjacent Bayugo. Debris flows, volcanic rocks, and fluviolacustrine sediments accumulating in the actively extending Mainit graben subsequently covered the deposits and preserved the supergene profiles. At Boyongan and Bayugo, there is a vertical transition from shallower supergene copper oxide minerals (malachite + azurite + cuprite) to deeper sulfide-stable assemblages (chalcocite ?? hypogene sulfides). This transition provides a time-integrated proxy for the position of the water table at the base of the saturated zone during supergene oxidation. Contours of the elevation of the paleopotentiometric surface based on this min- eralogical transition show that the thickest portions of the unsaturated zone coincided with a silt-sand matrix diatreme breccia complex at Boyongan. Within the breccia complex, the thickness of the unsaturated zone approached 600 in, whereas outside the breccia complex (e.g., at Bayugo), the thickness averaged 50 m. Contours of the paleopotentiometric surface suggest that during weathering, groundwater flowed into the breccia complex from the north, south, and east, and exited along a high permeability zone to the west. The high relief (>550 m) on the elevation of the paleopotentiometric surface is consistent with an environment of high topographic relief, and the outflow zone to the west of the breccia complex probably reflects proximity to a steep scarp intersecting the western breccia complex margin. Stable isotope paleoaltimetry has enabled estimation of the elevation of the land surface, which further constrains the physiographic setting during supergene oxidation. Isotopic measurements of oxygen in supergene kaolinite from Boyongan suggest that local paleometeoric water involved in weathering had a ??180 composition of approximately -5.7 per mil. At the latitude of the southern Philippines, this value corresponds to Pleistocene rain water condensing at elevations between 750 and 1,050 m above contemporary sea level, providing a maximum estimate for the surface elevation during weathering of the porphyry systems. Physiographic reconstuctions suggest that the deep oxidation profile at Boyongan formed in an environment of high topographic relief immediately east of a prominent (>550 m) escarpment. The high permeability contrast between the breccia complex and the surrounding wall rocks, coupled with the proximity of the breccia complex to the escarpment, led to a depressed groundwater table and a vertically extensive unsaturated zone in the immediate vicinity of Boyongan. This thick vadose zone and the low hypogene pyrite/copper sulfide ratios (0.6) at Boyongan promoted in situ oxidation of copper sulfides with only modest (<200 m) supergene remobilization of copper. In contrast, higher hypogene pyrite/chalcopyrite ratios (2.3) at Bayugo led to greater acid production during weathering and more complete leaching of copper above the base of oxidation. This process promoted significant (600 m) lateral dispersion of copper down the paleohydraulic gradient into the diatreme breccia comple, ultimately leading to the formation of an exotic copper deposit. ?? 2009 Society of Economices Geologists, Inc.

Economic Geology↗

The U.S. Geological Survey Land Remote Sensing Program

In 2002, the U. S. Geological Survey (USGS) launched a program to enhance the acquisition, preservation, and use of remotely sensed data for USGS science programs, as well as for those of cooperators and customers. Remotely sensed data are fundamental tools for studying the Earth's land surface, including coastal and near-shore environments. For many decades, the USGS has been a leader in providing remotely sensed data to the national and international communities. Acting on its historical topographic mapping mission, the USGS has archived and distributed aerial photographs of the United States for more than half a century. Since 1972, the USGS has acquired, processed, archived, and distributed Landsat and other satellite and airborne remotely sensed data products to users worldwide. Today, the USGS operates and manages the Landsats 5 and 7 missions and cooperates with the National Aeronautics and Space Administration (NASA) to define and implement future satellite missions that will continue and expand the collection of moderate-resolution remotely sensed data. In addition to being a provider of remotely sensed data, the USGS is a user of these data and related remote sensing technology. These data are used in natural resource evaluations for energy and minerals, coastal environmental surveys, assessments of natural hazards (earthquakes, volcanoes, and landslides), biological surveys and investigations, water resources status and trends analyses and studies, and geographic and cartographic applications, such as wildfire detection and tracking and as a source of information for The National Map. The program furthers these distinct but related roles by leading the USGS activities in providing remotely sensed data while advancing applications of such data for USGS programs and a wider user community.

Fact Sheet↗

Geology, petrology, and chemistry of the Leadville Dolomite: host for uranium at the Pitch Mine, Saguache County, Colorado

Newly documented uranium ore in the Pitch Mine occurs chiefly in brecciated Mississippian Leadville Dolomite along the Chester reverse fault zone, and to a lesser extent in sandstone, siltstone, and carbonaceous shale of the Pennsylvanian Belden Formation and in Precambrian granitic rocks and schist. Uranium-mineralized zones are generally thicker, more consistent, and of higher grade in dolomite than in other hosts, and roughly 50 percent of the new reserves are in dolomite. Strong physical control by dolomite is evident, as this is the only lithology that is pervasively brecciated within the fault slices that make up the footwall of the reverse fault zone. Other lithologies tend to either remain unbroken or undergo ductile deformation. Chemical controls are subtle and appear to involve chiefly formation of FeS2 as pyrite and marcasite, which accompany uranium. Leadville Dolomite in the area is about 130 m thick and is predominantly nonfossiliferous dolomicrite. In the Pitch Mine, Leadville Dolomite is bound by faults and maximum known thickness is about 17 m. Mud texture, paucity of fossils and other allochems, thin laminations, and probable algal mat structures suggest sedimentation in a tidal-flat (possibly supratidal) environment. Preservation of mud texture and lack of replacement features indicate that dolomitization was an early, prelithification process, as in modern tidal flats, and produced a chemically and texturally uniform rock over tens of meters with relatively few limestone beds surviving. The sedimentary and diagenetic environment of the tidal-flat dolomite, apparently most favorable for uranium deposits, probably obtained over a large area and should consistute an exploration target over a broad area of central Colorado. Carbonate rocks of the Belden Formation, in contrast to those of the Leadville, contain calcite in great excess of dolomite, more than 5 percent silt-size quartz and clay, and abundant fossils and oolites. Belden limestones (sandy micrite and sandy wackestone) probably were deposited in an intertidal or subtidal environment. Very little uranium ore occurs in these rocks. Chemical aspects, such as the iron, sulfur, and organic carbon contents, are very similar to those of Leadville dolomites, and hence seem favorable, but Belden limestones generally are only mildly fractured. The minor-element content of ore-bearing dolomites is generally normal judging from the relatively scarce data yet published for comparable rocks. Elements enriched in ore include iron, sulfur, molybdenum, and lead. One surface expression of ore in dolomite is ocher-colored, leached, porous gossan that is characterized by residual silica and limonite and by high radioactivity but low chemical uranium content.

Open-File Report↗

Application of automated image analysis to coal petrography

The coal petrologist seeks to determine the petrographic characteristics of organic and inorganic coal constituents and their lateral and vertical variations within a single coal bed or different coal beds of a particular coal field. Definitive descriptions of coal characteristics and coal facies provide the basis for interpretation of depositional environments, diagenetic changes, and burial history and determination of the degree of coalification or metamorphism. Numerous coal core or columnar samples must be studied in detail in order to adequately describe and define coal microlithotypes, lithotypes, and lithologic facies and their variations. The large amount of petrographic information required can be obtained rapidly and quantitatively by use of an automated image-analysis system (AIAS). An AIAS can be used to generate quantitative megascopic and microscopic modal analyses for the lithologic units of an entire columnar section of a coal bed. In our scheme for megascopic analysis, distinctive bands 2 mm or more thick are first demarcated by visual inspection. These bands consist of either nearly pure microlithotypes or lithotypes such as vitrite/vitrain or fusite/fusain, or assemblages of microlithotypes. Megascopic analysis with the aid of the AIAS is next performed to determine volume percentages of vitrite, inertite, minerals, and microlithotype mixtures in bands 0.5 to 2 mm thick. The microlithotype mixtures are analyzed microscopically by use of the AIAS to determine their modal composition in terms of maceral and optically observable mineral components. Megascopic and microscopic data are combined to describe the coal unit quantitatively in terms of (V) for vitrite, (E) for liptite, (I) for inertite or fusite, (M) for mineral components other than iron sulfide, (S) for iron sulfide, and (VEIM) for the composition of the mixed phases (X i ) i = 1,2, etc. in terms of the maceral groups vitrinite V, exinite E, inertinite I, and optically observable mineral content M. The volume percentage of each component present is indicated by a subscript. For example, a lithologic unit was determined megascopically to have the composition (V) 13 (I) 1 (S) 1 (X 1 ) 83 (X 2 ) 2 . After microscopic analysis of the mixed phases, this composition was expressed as (V) 13 (I) 1 (S) 1 (V 63 E 19 I 14 M 4 ) 83 (V 67 E 11 I 13 M 9 ) 2 . Finally, these data were combined in a description of the bulk composition as V 67 E 16 I 13 M 3 S 1 . An AIAS can also analyze textural characteristics and can be used for quick and reliable determination of rank (reflectance). Our AIAS is completely software based and incorporates a television (TV) camera that has optimum response characteristics in the range of reflectance less than 5%, making it particularly suitable for coal studies. Analysis of the digitized signal from the TV camera is controlled by a microprocessor having a resolution of 64 gray levels between full illumination and dark current. The processed image is reconverted for display on a TV monitor screen, on which selection of phases or features to be analyzed is readily controlled and edited by the operator through use of a lightpen. We expect that automated image analysis, because it can rapidly provide a large amount of pertinent information, will play a major role in the advancement of coal petrography.

International Journal of Coal Geology↗

Columbus crater and other possible groundwater-fed paleolakes of Terra Sirenum, Mars

Columbus crater in the Terra Sirenum region of the Martian southern highlands contains light‐toned layered deposits with interbedded sulfate and phyllosilicate minerals, a rare occurrence on Mars. Here we investigate in detail the morphology, thermophysical properties, mineralogy, and stratigraphy of these deposits; explore their regional context; and interpret the crater's aqueous history. Hydrated mineral‐bearing deposits occupy a discrete ring around the walls of Columbus crater and are also exposed beneath younger materials, possibly lava flows, on its floor. Widespread minerals identified in the crater include gypsum, polyhydrated and monohydrated Mg/Fe‐sulfates, and kaolinite; localized deposits consistent with montmorillonite, Fe/Mg‐phyllosilicates, jarosite, alunite, and crystalline ferric oxide or hydroxide are also detected. Thermal emission spectra suggest abundances of these minerals in the tens of percent range. Other craters in northwest Terra Sirenum also contain layered deposits and Al/Fe/Mg‐phyllosilicates, but sulfates have so far been found only in Columbus and Cross craters. The region's intercrater plains contain scattered exposures of Al‐phyllosilicates and one isolated mound with opaline silica, in addition to more common Fe/Mg‐phyllosilicates with chlorides. A Late Noachian age is estimated for the aqueous deposits in Columbus, coinciding with a period of inferred groundwater upwelling and evaporation, which (according to model results reported here) could have formed evaporites in Columbus and other craters in Terra Sirenum. Hypotheses for the origin of these deposits include groundwater cementation of crater‐filling sediments and/or direct precipitation from subaerial springs or in a deep (∼900 m) paleolake. Especially under the deep lake scenario, which we prefer, chemical gradients in Columbus crater may have created a habitable environment at this location on early Mars.

Journal of Geophysical Research E: Planets↗

Characterization of arsenic species in microbial mats from an inactive gold mine

Filamentous cyanobacterial mats and Fe oxyhydroxide-rich bacterial mats collected near an inactive gold mine in California are enriched in arsenic (As) approximately 1000-fold relative to the waters in contact with them. The predominant organism in the cyanobacterial mat could not be identified using morphological characteristics, but the unique morphology of the sheath-forming β protobacterium Leptothrix ochracea was used to identify this species in Fe oxyhydroxide mat samples from several sites near the gold mine. Leptothrix sheaths commonly exceed 10 μm in length and have an average diameter of 1 μm . The Fe-oxyhydroxide mats are dominated by L. ochracea sheaths, but use of fluorescently tagged genetic stains reveals the presence of sheathless bacteria that presumably also promote the formation of Fe oxyhydroxide. X-ray absorption fine structure (XAFS) spectroscopy was used to identify As species in these microbial mats. Mat-associated As is predominantly As(V), even when As(III) is the primary dissolved species in contact with the mats. The species of As(V) associated with the cyanobacterial mat could not be conclusively identified; however, it is not associated with Fe oxyhydroxide or other minerals, based on comparison to XAFS spectra of As adsorbed to various substrates. In addition, the cyanobacterial mat XAFS spectrum is different from that of aqueous As(V), suggesting that As(V) in the mat lacks some or all of the coordinating water molecules present in aqueous solution. We hypothesize that As is associated with the exopolysaccharide (EPS) matrix secreted by the cyanobacteria. In Leptothrix -dominated Fe-oxyhydroxide bacterial mats, XAFS analysis clearly indicates that As(V) is associated with the Fe oxyhydroxide as an adsorbed and/or coprecipitated complex.

California↗

Hydrothermal alteration mineralogy of SOH drill holes, Kilauea East Rift Zone geothermal area, Hawaii

Thirty-eight hydrothermal minerals were identified from 356 drill-core specimens that were obtained from three Scientific Observation Holes (SOH-1, SOH-2, and SOH-4) drilled along the lower East Rift Zone (ERZ) of Kilauea Volcano, Hawaii. The minerals formed during alteration of basaltic rocks and glass by hot, circulating, waters in aquifers consisting of variable mixtures of meteoric water and sea water. Several zeolites, hydrated calcium silicates, carbonates, clays, silicates, sulfates, sulfides, and other minerals were found filling open spaces of vesicles, fractures, and between breccia fragments of the recovered drill core; many specimens that originally consisted of glass are completely altered to some of these minerals, especially clays. Several hydrothermal minerals (erionite, mordenite, truscottite, smectite, chlorite-smectite, chalcedony, anhydrite, and hematite), occur in the SOH drill holes at higher measured temperatures than the same minerals are found in geothermal drill holes of Iceland or other geothermal areas, suggesting that temperatures within the ERZ geothermal system have increased since the minerals formed. Fluid-inclusion freezing data for quartz, anhydrite, and calcite from the three SOH holes show that composition of the inclusion fluids ranges from dilute meteoric water to highly modified sea water concentrated by boiling. Comparison of measured drill-hole temperatures with fluid-inclusion homogenization-temperature data indicates that only about 15% of the fluid inclusions could have formed under the present thermal conditions. The majority of fluid inclusions studied apparently formed during one or more temperature fluctuations associated with the emplacement of nearby dikes and their subsequent cooling. Bacteria-like particles at 1734.6 m depth in SOH-4 could be very significant because the particles occurred at much hotter temperatures (about 265°C) than the generally accepted 110°C limit for survival of bacteria. The presence of Cl in the particles suggests that they might have lived in a saline environment and did not result from contamination by the fresh water drilling fluids. We reccomend that future drilling and subsequent handling of drill hole specimens in the ERZ and elsewhere employ controls to minimize and(or) recognize bacterial contamination.

Open-File Report↗

Mineralogy and stratigraphy of phyllosilicate-bearing and dark mantling units in the greater Mawrth Vallis/west Arabia Terra area: Constraints on geological origin

Analyses of MRO/CRISM images of the greater Mawrth Vallis region of Mars affirm the presence of two primary phyllosilicate assemblages throughout a region ∼1000 × 1000 km. These two units consist of an Fe/Mg-phyllosilicate assemblage overlain by an Al-phyllosilicate and hydrated silica assemblage. The lower unit contains Fe/Mg-smectites, sometimes combined with one or more of these other Fe/Mg-phyllosilicates: serpentine, chlorite, biotite, and/or vermiculite. It is more than 100 m thick and finely layered at meter scales. The upper unit includes Al-smectite, kaolin group minerals, and hydrated silica. It is tens of meters thick and finely layered as well. A common phyllosilicate stratigraphy and morphology is observed throughout the greater region wherever erosional windows are present. This suggests that the geologic processes forming these units must have occurred on at least a regional scale. Sinuous ridges (interpreted to be inverted channels) and narrow channels cut into the upper clay-bearing unit suggesting that aqueous processes were prevalent after, and possibly during, the deposition of the layered units. We propose that layered units may have been deposited at Mawrth Vallis and then subsequently altered to form the hydrated units. The Fe/Mg-phyllosilicate assemblage is consistent with hydrothermal alteration or pedogenesis of mafic to ultramafic rocks. The Al-phyllosilicate/hydrated silica unit may have formed through alteration of felsic material or via leaching of basaltic material through pedogenic alteration or a mildly acidic environment. These phyllosilicate-bearing units are overlain by a darker, relatively unaltered, and indurated material that has probably experienced a complex geological history.

Journal of Geophysical Research↗

Quantifying anthropogenic contributions to century-scale groundwater salinity changes, San Joaquin Valley, California, USA

Total dissolved solids (TDS) concentrations in groundwater tapped for beneficial uses (drinking water, irrigation, freshwater industrial) have increased on average by about 100 mg/L over the last 100 years in the San Joaquin Valley, California (SJV). During this period land use in the SJV changed from natural vegetation and dryland agriculture to dominantly irrigated agriculture with growing urban areas. Century-scale salinity trends were evaluated by comparing TDS concentrations and major ion compositions of groundwater from wells sampled in 1910 (Historic) to data from wells sampled in 1993-2015 (Modern). TDS concentrations in subregions of the SJV, the southern (SSJV), western (WSJV), northeastern (NESJV), and southeastern (SESJV) were calculated using a cell-declustering method. TDS concentrations increased in all regions, with the greatest increases found in the SSJV and SESJV. Evaluation of the Modern data from the NESJV and SESJV found higher TDS concentrations in recently recharged (post-1950) groundwater from shallow (< 50 m) wells surrounded predominantly by agricultural land uses, while premodern (pre-1950) groundwater from deeper wells, and recently recharged groundwater from wells surrounded by mainly urban, natural, and mixed land uses had lower TDS concentrations, approaching the TDS concentrations in the Historic groundwater. For the NESJV and SESJV, inverse geochemical modeling with PHREEQC indicated that weathering of primary silicate minerals accounted for the majority of the increase in TDS concentrations, contributing more than nitrate from fertilizers and sulfate from soil amendments combined. Bicarbonate showed the greatest increase among major ions, resulting from enhanced silicate weathering due to recharge of irrigation water enriched in CO2 during the growing season. The results of this study demonstrate that large anthropogenic changes to the hydrologic regime, like massive development of irrigated agriculture in semi-arid areas like the SJV, can cause large changes in groundwater quality on a regional scale.

California↗

The nutrition of salmonid fishes. I. Chemical and histological studies of wild and domestic fish

Salmonids reared under artificial conditions show marked consistent differences in body composition in comparison with wild salmonids. Protein and mineral levels are lower and lipid values are higher in hatchery fish than in wild fish. As the period of artificial rearing is increased, these differences become more extreme. In hatchery fish, there is generally more microscopically visible fat in the liver and viscera than in these organs in wild fish although extremes are seen in both groups. In young hatchery fish and in wild fish, there is no correlation between fat deposition in the liver and in the pancreas, but in older hatchery fish, both of these organs are fatty and there is a simultaneous increase in total body lipid. In wild fish, ceroid deposition is greater, suggesting that the fatty acids are more highly unsaturated. There is little difference in disease incidence between the two groups, but parasitism is more pronounced in wild fish. The significant variables between wild and artificially produced fish appear to be limited to diet and environment. From the factors discussed above, diet alone is probably the most important single factor in producing the changes observed in body composition.

Alaska, British Columbia, California, Oregon, Wash↗

Long term atmospheric deposition as the source of nitrate and other salts in the Atacama Desert, Chile: New evidence from mass-independent oxygen isotopic compositions

Isotopic analysis of nitrate and sulfate minerals from the nitrate ore fields of the Atacama Desert in northern Chile has shown anomalous 17 O enrichments in both minerals. Δ 17 O values of 14–21 ‰ in nitrate and 0.4 to 4 ‰ in sulfate are the most positive found in terrestrial minerals to date. Modeling of atmospheric processes indicates that the Δ 17 O signatures are the result of photochemical reactions in the troposphere and stratosphere. We conclude that the bulk of the nitrate, sulfate and other soluble salts in some parts of the Atacama Desert must be the result of atmospheric deposition of particles produced by gas to particle conversion, with minor but varying amounts from sea spray and local terrestrial sources. Flux calculations indicate that the major salt deposits could have accumulated from atmospheric deposition in a period of 200,000 to 2.0 M years during hyper-arid conditions similar to those currently found in the Atacama Desert. Correlations between Δ 17 O and δ 18 O in nitrate salts from the Atacama Desert and Mojave Desert, California, indicate varying fractions of microbial and photochemical end-member sources. The photochemical nitrate isotope signature is well preserved in the driest surficial environments that are almost lifeless, whereas the microbial nitrate isotope signature becomes dominant rapidly with increasing moisture, biologic activity, and nitrogen cycling. These isotopic signatures have important implications for paleoclimate, astrobiology, and N cycling studies.

Geochimica et Cosmochimica Acta↗

Multiple applications of the U.S. EPA 1312 leach procedure to mine waste from the Animas watershed, SW Colorado

Eleven acid-sulphate and quartz-sericite-pyrite altered mine waste samples from the Animas River watershed in SW Colorado were subjected to a series of 5 to 6 successive leaches using the US EPA 1312 leach protocol to evaluate the transport of metals and loss of acidity from mine wastes as a function of time. Multi-acid digestion ICP-AES analyses, X-ray diffraction (XRD) mineral identification, total sulphur, and net acid potential (NAP) determinations were performed on the initial starting materials. Multiple leaching steps generally showed a ‘flushing' effect, whereby elements loosely bound, presumably as water-soluble salts, were removed. Aluminum, Cd, Fe, Mg, Mn, Sr, Zn, and S showed decreasing concentration trends, whereas Cu concentrations showed initially decreasing trends, followed by increasing trends in later steps. Concentrations of Zn in the first leach step were independent of whole-sample Zn content. Lead and Ba concentrations consistently increased with each step, indicating that anglesite (PbSO 4 ) and barite (BaSO 4 ), respectively, were dissolving in successive leach steps. Comparison of Fe content with NAP resulted in a modest correlation. However, using the S analyses and XRD identification of sulphide minerals to apportion S amongst enargite, barite, anglesite/galena, and sphalerite, and assigning the remaining S to pyrite, provided a useful correlation between estimated pyrite content and NAP. Whole-sample mass loss correlated well with NAP, but individual elements' behaviors varied between positive correlation (e.g. Al, Fe, Mg), no apparent correlation (Ca, Cd, Pb, Zn), and negative correlation (Cu). Comparison of the summed titrated acidities of the leachates with the whole-sample NAP values yielded an estimate of the fraction of NAP consumed, and led to an estimate of the time it would take to consume the sample acidity by weathering. We estimate, on the basis of these experiments, the acidity in the upper 30 cm would be consumed in 200–1000 years. In addition, calculations suggest that the acidity would be depleted before the complete store of the metals Cu-Cd-Zn in these mine wastes would be released to the environment.

Colorado↗