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Development, calibration, and analysis of a hydrologic and water-quality model of the Delaware Inland Bays watershed

Excessive nutrients and sediment are among the most significant environmental stressors in the Delaware Inland Bays (Rehoboth, Indian River, and Little Assawoman Bays). Sources of nutrients, sediment, and other contaminants within the Inland Bays watershed include point-source discharges from industries and wastewater-treatment plants, runoff and infiltration to ground water from agricultural fields and poultry operations, effluent from on-site wastewater disposal systems, and atmospheric deposition. To determine the most effective restoration methods for the Inland Bays, it is necessary to understand the relative distribution and contribution of each of the possible sources of nutrients, sediment, and other contaminants. A cooperative study involving the Delaware Department of Natural Resources and Environmental Control, the Delaware Geological Survey, and the U.S. Geological Survey was initiated in 2000 to develop a hydrologic and water-quality model of the Delaware Inland Bays watershed that can be used as a water-resources planning and management tool. The model code Hydrological Simulation Program - FORTRAN (HSPF) was used. The 719-square-kilometer watershed was divided into 45 model segments, and the model was calibrated using streamflow and water-quality data for January 1999 through April 2000 from six U.S. Geological Survey stream-gaging stations within the watershed. Calibration for some parameters was accomplished using PEST, a model-independent parameter estimator. Model parameters were adjusted systematically so that the discrepancies between the simulated values and the corresponding observations were minimized. Modeling results indicate that soil and aquifer permeability, ditching, dominant land-use class, and land-use practices affect the amount of runoff, the mechanism or flow path (surface flow, interflow, or base flow), and the loads of sediment and nutrients. In general, the edge-of-stream total suspended solids yields in the Inland Bays watershed are low in comparison to yields reported for the Eastern Shore from the Chesapeake Bay watershed model. The flatness of the terrain and the low annual surface runoff are important factors in determining the amount of detached sediment from the land that is delivered to streams. The highest total suspended solids yields were found in the southern part of the watershed, associated with high total streamflow and a high surface runoff component, and related to soil and aquifer permeability and land use. Nutrient yields from watershed model segments in the southern part of the Inland Bays watershed were the highest of all calibrated segments, due to high runoff and the substantial amount of available organic fertilizer (animal waste), which results in over-application of organic fertilizer to crops. Time series of simulated hourly total nitrogen concentrations and observed instantaneous values indicate a seasonal pattern, with the lowest values occurring during the summer and the highest during the winter months. Total phosphorus and total suspended solids concentrations are somewhat less seasonal. During storm events, total nitrogen concentrations tend to be diluted and total phosphorus concentrations tend to rise sharply. Nitrogen is transported mainly in the aqueous phase and primarily through ground water, whereas phosphorus is strongly associated with sediment, which washes off during precipitation events.

Water-Resources Investigations Report↗

National Park Service Vegetation Mapping Inventory Program: Jean Lafitte National Historical Park and Preserve Vegetation Mapping Project

The National Park Service, Natural Resource Stewardship and Science office in Fort Collins, Colorado, publishes a range of reports that address natural resource topics. These reports are of interest and applicability to a broad audience in the National Park Service and others in natural resource management, including scientists, conservation and environmental constituencies, and the public. The Natural Resource Report Series is used to disseminate comprehensive information and analysis about natural resources and related topics concerning lands managed by the National Park Service. The series supports the advancement of science, informed decision-making, and the achievement of the National Park Service mission. The series also provides a forum for presenting lengthier results that may not be accepted by publications with page limitations. All manuscripts in the series receive the appropriate level of peer review to ensure that the information is scientifically credible, technically accurate, appropriately written for the intended audience, and designed and published in a professional manner. This report received formal peer review by subject-matter experts whose background and expertise put them on par technically and scientifically with the authors of the information. The peer review was led according to the Fundamental Science Practices of the U.S. Geological Survey. Views, statements, findings, conclusions, recommendations, and data in this report do not necessarily reflect views and policies of the National Park Service, U.S. Department of the Interior. Mention of trade names or commercial products does not constitute endorsement or recommendation for use by the U.S. Government. This report is available in digital format from the Gulf Coast Network website and the Natural Resource Publications Management website.

Louisiana↗

Hierarchical modeling of an invasive spread: The eurasian collared-dove streptopelia decaocto in the United States

Invasive species are regularly claimed as the second threat to biodiversity. To apply a relevant response to the potential consequences associated with invasions (e.g., emphasize management efforts to prevent new colonization or to eradicate the species in places where it has already settled), it is essential to understand invasion mechanisms and dynamics. Quantifying and understanding what influences rates of spatial spread is a key research area for invasion theory. In this paper, we develop a model to account for occupancy dynamics of an invasive species. Our model extends existing models to accommodate several elements of invasive processes; we chose the framework of hierarchical modeling to assess site occupancy status during an invasion. First, we explicitly accounted for spatial structure and how distance among sites and position relative to one another affect the invasion spread. In particular, we accounted for the possibility of directional propagation and provided a way of estimating the direction of this possible spread. Second, we considered the influence of local density on site occupancy. Third, we decided to split the colonization process into two subprocesses, initial colonization and recolonization, which may be ground-breaking because these subprocesses may exhibit different relationships with environmental variations (such as density variation) or colonization history (e.g., initial colonization might facilitate further colonization events). Finally, our model incorporates imperfection in detection, which might be a source of substantial bias in estimating population parameters. We focused on the case of the Eurasian Collared-Dove (Streptopelia decaocto) and its invasion of the United States since its introduction in the early 1980s, using data from the North American BBS (Breeding Bird Survey). The Eurasian Collared-Dove is one of the most successful invasive species, at least among terrestrial vertebrates. Our model provided estimation of the spread direction consistent with empirical observations. Site persistence probability exhibits a quadratic response to density. We also succeeded at detecting differences in the relationship between density and initial colonization vs. recolonization probabilities. We provide a map of sites that may be colonized in the future as an example of possible practical application of our work. ?? 2011 by the Ecological Society of America.

Ecological Applications↗

Use of terrestrial field studies in the derivation of bioaccumulation potential of chemicals

Field-based studies are an essential component of research addressing the behavior of organic chemicals, and a unique line of evidence that can be used to assess bioaccumulation potential in chemical registration programs and aid in development of associated laboratory and modeling efforts. To aid scientific and regulatory discourse on the application of terrestrial field data in this manner, this article provides practical recommendations regarding the generation and interpretation of terrestrial field data. Currently, biota-to-soil-accumulation factors (BSAFs), biomagnification factors (BMFs), and bioaccumulation factors (BAFs) are the most suitable bioaccumulation metrics that are applicable to bioaccumulation assessment evaluations and able to be generated from terrestrial field studies with relatively low uncertainty. Biomagnification factors calculated from field-collected samples of terrestrial carnivores and their prey appear to be particularly robust indicators of bioaccumulation potential. The use of stable isotope ratios for quantification of trophic relationships in terrestrial ecosystems needs to be further developed to resolve uncertainties associated with the calculation of terrestrial trophic magnification factors (TMFs). Sampling efforts for terrestrial field studies should strive for efficiency, and advice on optimization of study sample sizes, practical considerations for obtaining samples, selection of tissues for analysis, and data interpretation is provided. Although there is still much to be learned regarding terrestrial bioaccumulation, these recommendations provide some initial guidance to the present application of terrestrial field data as a line of evidence in the assessment of chemical bioaccumulation potential and a resource to inform laboratory and modeling efforts.

Integrated Environmental Assessment and Management↗

Vegetative response to water availability on the San Carlos Apache Reservation

On the San Carlos Apache Reservation in east-central Arizona, U.S.A., vegetation types such as ponderosa pine forests, pinyon-juniper woodlands, and grasslands have significant ecological, cultural, and economic value for the Tribe. This value extends beyond the tribal lands and across the Western United States. Vegetation across the Southwestern United States is susceptible to drought conditions and fluctuating water availability. Remotely sensed vegetation indices can be used to measure and monitor spatial and temporal vegetative response to fluctuating water availability conditions. We used the Moderate Resolution Imaging Spectroradiometer (MODIS)-derived Modified Soil Adjusted Vegetation Index II (MSAVI 2 ) to measure the condition of three dominant vegetation types (ponderosa pine forest, woodland, and grassland) in response to two fluctuating environmental variables: precipitation and the Standardized Precipitation Evapotranspiration Index (SPEI). The study period covered 2002 through 2014 and focused on a region within the San Carlos Apache Reservation. We determined that grassland and woodland had a similar moderate to strong, year-round, positive relationship with precipitation as well as with summer SPEI. This suggests that these vegetation types respond negatively to drought conditions and are more susceptible to initial precipitation deficits. Ponderosa pine forest had a comparatively weaker relationship with monthly precipitation and summer SPEI, indicating that it is more buffered against short-term drought conditions. This research highlights the response of multiple, dominant vegetation types to seasonal and inter-annual water availability. This research demonstrates that multi-temporal remote sensing imagery can be an effective tool for the large scale detection of vegetation response to adverse impacts from climate change and support potential management practices such as increased monitoring and management of drought-affected areas. Different vegetation types displayed various responses to water availability, further highlighting the need for individual management plans for forest and woodland, especially considering the projected drier conditions in the Southwest U.S. and other arid or semi-arid regions around the world.

Arizona↗

Water-quality assessment of the Trinity River Basin, Texas - Nutrients in two coastal prairie streams draining agricultural areas, 1994-95

In 1991, the U.S. Geological Survey (USGS) began nationwide implementation of the National Water-Quality Assessment (NAWQA) Program. Long-term goals of NAWQA are to describe the status of and trends in the quality of a large, representative part of the Nation?s surface- and ground-water resources and to provide a sound, scientific understanding of the primary natural and human factors affecting the quality of these resources (Leahy and others, 1990). The Trinity River Basin in east-central Texas (fig. 1) was among the first 20 hydrologic areas, called study units, to be assessed by this program. The first intensive data-collection phase for the Trinity River Basin NAWQA began in March 1993 and ended in September 1995. Streams in the Trinity River Basin were assessed by sampling water, bed sediment, and tissue of biota and characterizing the aquatic communities and their habitat. Aquifers were assessed by sampling water from wells. The coastal prairie is a small part of the Trinity River Basin, but it is environmentally important because of its proximity to Galveston Bay and the extensive use of agricultural chemicals on many irrigated farms. Galveston Bay (fig. 1) was selected by Congress as an estuary of national significance and was included on a priority list for the National Estuary Program. The Trinity River is especially important because its watershed dominates the total Galveston Bay drainage area and because its flow contributes substantial amounts of freshwater and water-quality constituents to the bay. Historically, measurements of the quantity and quality of water entering Galveston Bay from the Trinity River Basin have been made using data from a station about 113 kilometers (70 miles) upstream from Trinity Bay, an inlet bay to Galveston Bay. With a focused objective of providing additional water-quality information in the intervening coastal prairie area and an overall objective of improving the understanding of the relations between farming practices and stream quality in the Trinity River Basin, a special study was conducted. This report provides a description of the occurrence and concentrations of nutrients in two streams in this intervening area. An earlier report by Brown (1996) describes the occurrence and concentrations of pesticides in these two streams. An overall analysis of nutrient data collected during 1974?91 in the Trinity River Basin is given by Van Metre and Reutter (1995).

Open-File Report↗

The effects of management practices on grassland birds—Greater Sage-Grouse ( Centrocercus urophasianus )

Keys to Greater Sage-Grouse ( Centrocercus urophasianus ) management are maintenance of expansive stands of sagebrush ( Artemisia species [spp.]), especially varieties of big sagebrush ( Artemisia tridentata ) with abundant forbs in the understory, particularly during spring; undisturbed and somewhat open sites for leks; and healthy perennial grass and forb stands intermixed with sagebrush for brood rearing. Within suitable habitats, areas should have 15–25 percent canopy cover of sagebrush 30–80 centimeters (cm) tall for nesting and 10–25 percent canopy cover 40–80 cm tall for brood rearing. In winter habitats, shrubs should be exposed 25–35 cm above snow and have 10–30 percent canopy cover exposed above snow. In nesting and brood-rearing habitats, the understory should have at least 15 percent cover of grasses and at least 10 percent cover of forbs greater than or equal to 18 cm tall. Greater Sage-Grouse have been reported to use habitats with 5–110 cm average vegetation height, 5–160 cm visual obstruction reading, 3–51 percent grass cover, 3–20 percent forb cover, 3–69 percent shrub cover, 7–63 percent sagebrush cover, 14–51 percent bare ground, and 0–18 percent litter cover. Unless otherwise noted, this account refers to habitat requirements and environmental factors affecting Greater Sage-Grouse but not Gunnison Sage-Grouse ( Centrocercus minimus ). Habitats used by Gunnison Sage-Grouse are generally similar to habitats used by Greater Sage-Grouse, but some differences have been reported. The Greater Sage-Grouse is a game bird and is hunted throughout most of its current range. This account does not address harvest or its effects on populations; rather, this account focuses on the effects of habitat management.

Professional Paper↗

Nutrient, organic carbon, and chloride concentrations and loads in selected Long Island Sound tributaries—Four decades of change following the passage of the Federal Clean Water Act

Trends in long-term water-quality and streamflow data from 14 water-quality monitoring sites in Connecticut were evaluated for water years 1974–2013 and 2001–13, coinciding with implementation of the Clean Water Act of 1972 and the Connecticut Nitrogen Credit Exchange program, as part of an assessment of nutrient and chloride concentrations and loads discharged to Long Island Sound. In this study, conducted by the U.S. Geological Survey in cooperation with the Connecticut Department of Energy and Environmental Protection, data were evaluated using a recently developed methodology of weighted regressions with time, streamflow, and season. Trends in streamflow were evaluated using a locally weighted scatterplot smoothing method. Annual mean streamflow increased at 12 of the 14 sites averaging 8 percent during the entire study period, primarily in the summer months, and increased by an average of 9 percent in water years 2001–13, primarily during summer and fall months. Downward trends in flow-normalized nutrient concentrations and loads were observed during both periods for most sites for total nitrogen, total Kjeldahl nitrogen, nitrite plus nitrate nitrogen, total phosphorus, and total organic carbon. Average flow-normalized loads of total nitrogen decreased by 23.9 percent for the entire period and 10.9 percent for the period of water years 2001‒13. Major factors contributing to decreases in flow-normalized loads and concentrations of these nutrients include improvements in wastewater treatment practices, declining atmospheric wet deposition of nitrogen, and changes in land management and land use. Loads of dissolved silica (DSi; flow-normalized and non-flow-normalized) increased slightly at most stations during the study period and were positively correlated to urbanized land in the basin and negatively correlated to area of open water. Concentrations and loads of chloride increased at 12 of the 14 sites during both periods. Increases likely are the result of an increase in the use of salt for deicing, as well as other factors related to urbanization and population growth, such as increases in wastewater discharge and discharge from septic systems.

Connecticut↗

The potential for species distribution models to distinguish source populations from sinks

1. While species distribution models (SDM) are frequently used to predict species occurrences to help inform conservation management, there is limited evidence evaluating whether habitat suitability can reliably predict intrinsic growth rates or distinguish source from sink populations. Filling this knowledge gap is critical for conservation science, as applications of SDMs for management purposes ultimately depend on these typically unobserved population or metapopulation dynamics. 2. Using regression, we associate previously published population level estimates of intrinsic growth and abundance derived from a Bayesian analysis of mark-recapture data for 17 bird species found in the contiguous United States with SDM habitat suitability estimates fitted here to opportunistic data for these same species. We then use AUC to measure how well SDMs can distinguish populations categorized as sources and sinks, depending on their intrinsic growth rates estimated from the mark-recapture data. We built SDMs using two different approaches, boosted regression trees (BRT) and Generalized Linear Models (GLM), and compared their predictive performance. Each SDM was built with presence points obtained from eBird and 10 environmental variables previously selected to model intrinsic growth rates and abundance for these species. 3. We show that SDMs built with opportunistic data are poor predictors of species demography in general; both BRT and GLM explained very little spatial variation of intrinsic growth rate and population abundance (median R2 across 17 species was close to 0.1 for both SDM methods). SDMs do, however, estimate higher suitability for source populations as compared to sinks. Out of 13 species which had both source and sink populations, both BRT and GLM had AUC values greater than 0.7 for 7 species when discriminating between sources and sinks. 4. Habitat suitability have the potential to be a useful measure to indicate a population’s ability to sustain itself as a source population, however more research on a diverse set of taxa is essential to fully explore this potential. This interpretation of habitat suitability can be particularly useful for conservation practice, and identification of explicit cases of when and how SDMs fail to match population demography can be informative for advancing ecological theory.

Journal of Animal Ecology↗

Periphyton biomass and community compositions as indicators of water quality in the Lower Grand River hydrologic unit, Missouri and Iowa, 2011–18

Biological communities, including periphyton, are continuously affected by chemical, physical, and other biological factors, and the health of these communities can reflect the overall health of the aquatic system. A diverse community is more robust, and communities with lower richness and evenness often indicate a degraded community dominated by few taxa tolerant to the degraded conditions, which makes the community more susceptible to ecological changes. Water-quality nutrient samples were collected at sites in the Lower Grand River during 2010 through 2018 and periphyton sample collections began in 2011 to describe the periphyton community and overall ecological health. Nutrient sample concentrations were generally elevated at these sites, which can lead to eutrophication, excessive plant and algae growth, drinking-water taste and odor problems, low dissolved-oxygen concentrations, and harmful algal blooms. Concentrations of total nitrogen were greater than acceptable as described by the U.S. Environmental Protection Agency, and total phosphorus concentrations were greater than reference concentrations. Periphyton communities were dominated by taxa that are tolerant to or indicative of elevated nutrient concentrations; and nuisance algae, or harmful algal bloom producers, were identified at all sites, except one. The presence of these producers indicates that harmful algal blooms may have high potential during optimal conditions at these sites. Chlorophyll concentrations that exceed 100 milligrams per square meter are considered nuisance and were determined in 11 percent of the samples and at every site during September 2012. Samples were collected during low-flow conditions when nutrient concentrations are generally lower than during high-flow and runoff conditions. Elevated nutrient concentrations during low-flow conditions indicate nutrient concentrations are likely elevated throughout most of the year. Agriculture is the primary land use within the Lower Grand River and is likely a primary source of nutrients and sediments. Conservation practices intended to reduce nutrient loss from agriculture fields have increased because of the Mississippi River Basin Healthy Watersheds Initiative and will potentially increase the ecological, chemical, and physical health of these waterways.

Iowa, Missouri↗

Monitoring and simulation of hydrology, suspended sediment, and nutrients in selected tributary watersheds of Lake Erie, New York

The U.S. Geological Survey, in cooperation with Erie County, New York, the New York State Department of Environmental Conservation, and the Great Lakes Restoration Initiative, collected water-quality samples in nine selected New York tributaries to Lake Erie, computed estimates of suspended sediment and nutrient loads using the R scripting package rloadest and used the Soil and Water Assessment Tool (SWAT) to simulate hydrology and suspended sediment and nutrient loads from these tributaries. This project was undertaken to better understand the water quality of New York’s inputs into eastern Lake Erie. Water-quality samples for suspended sediment, nitrogen, and phosphorus were collected at 19 sampling sites in the Lake Erie Basin in New York. Daily and monthly suspended sediment and nutrient loads were computed with regressions of streamflow and suspended sediment and nutrient concentrations using rloadest. SWAT models of nine watersheds were created using publicly available data; and the loads calculated by rloadest. Twenty-six SWAT model scenarios were created to explore the effects that best management practices (BMPs; 21 scenarios), point source discharges (4 scenarios), and green infrastructure (1 scenario) can have on the water quality of the nine tributaries to Lake Erie. BMP scenarios for the watershed models included combinations of agricultural BMPs applied at varying implementation levels across the study watersheds, including cover crops, reduced tillage, nutrient management plans, and filter strips. The BMP scenarios showed small reductions of total nitrogen and total phosphorus. The scenarios have variable suspended sediment load results, with both increases and decreases of sediment modeled. The point source scenarios result in lower total phosphorus loads. The green infrastructure scenario shows only minimal reduction of suspended sediment and nutrient loads from the Buffalo River watershed but shows substantial reductions locally.

New York↗

Flow-through bioassay for measuring bioaccumulation of toxic substances from sediment

Over 10 million cubic meters of sediment are dredged annually from Great Lakes waterways. Because much of this material is taken from harbors, connecting channels, and other nearshore areas that often are contaminated with toxic substances, the sediments proposed for dredging need to be evaluated for the presence of bioavailable contaminants and the potential for toxicity to the biota. Sound decisions on the appropriate disposal of the dredged material can be made only after such an evaluation. Presently, no standardized procedure exists for evaluating dredged material in freshwater systems although current criteria for discharge of dredged material into marine water have been developed (USEPA/CE 1977). In the ocean discharge guideline, it is recommended that bioassays be conducted on liquid, solid, and suspended particulate phases of dredged material. because it appears that the solid phase has the greatest potential for environmental damage and because measurement of bioaccumulation must be made to evaluate sediments for disposal (USEPA/CE 1977, Seeyle and Mac 1983), we developed a bioassay for testing the solid phase of dredged material that measures the survival of organisms and, perhaps more important, the bioaccumulation of toxic substances by aquatic organisms from naturally contaminated sediments (Peddicord et al. 1980; Rubinstein et al. 1980, 1983; Seeyle st al. 1982), several have used testing methods that result in unacceptable mortality to control organisms (Bahnick et al. 1981, Prater et al. 1983). Our bioassay is intended to estimate the potential for bioaccumlation of contaminants from sediments that are not acutely toxic to test organisms, but are suspected of containing persistent contaminants. By using test organisms that are not highly susceptible to toxic compounds, the bioaccumulation test allows estimation of the potential food-chain accumulation of contaminants that may occur in local biota from surficial sediments. In practice, bioaccumulation observed in this bioassay by organisms exposed to test sediments (sediments to be dredged) would be compared to bioaccumulation observed from sediments collected from a reference site (e.g. a disposal site or open lake), and also from control sediments (relatively clean sediment). Decisions could then be based on a comparison of results between tests and reference sediments to determine if disposal would cause dehydration to the habitat, and between reference and control sediment to determine if even the reference material is seriously contaminated. Although the test is not intended to be a toxicity test per se, use of test, reference, and control sediments enables interpretation of any mortality of organisms that may occur during the bioassays. High mortality in bioassays with test or reference sediment would indicate acute toxicity of sediments in the project area. However if high mortality occurs in all three sediments, it can be assumed that the organisms were not in a healthy state at the time of testing. We describe the results of 10-day sediment bioassays in which both mortality and bioaccumulation were measured in four aquatic organisms. We exposed two infaunal organisms and two species of fish to test and control sediments in the laboratory.

Report↗

Relationships between microbial communities and environmental parameters at sites impacted by mining of volcanogenic massive sulfide deposits, Prince William Sound, Alaska

The relations among geochemical parameters and sediment microbial communities were examined at three shoreline sites in the Prince William Sound, Alaska, which display varying degrees of impact by acid-rock drainage (ARD) associated with historic mining of volcanogenic massive sulfide deposits. Microbial communities were examined using total fatty acid methyl esters (FAMEs), a class of compounds derived from lipids produced by eukaryotes and prokaryotes (bacteria and Archaea); standard extraction techniques detect FAMEs from both living (viable) and dead (non-viable) biomass, but do not detect Archaeal FAMEs. Biomass and diversity (as estimated by FAMEs) varied strongly as a function of position in the tidal zone, not by study site; subtidal muds, Fe oxyhydroxide undergoing biogenic reductive dissolution, and peat-rich intertidal sediment had the highest values. These estimates were lowest in acid-generating, intertidal zone sediment; if valid, the estimates suggest that only one or two bacterial species predominate in these communities, and/or that Archeal species are important members of the microbial community in this sediment. All samples were dominated by bacterial FAMEs (median value >90%). Samples with the highest absolute abundance of eukaryotic FAMEs were biogenic Fe oxyhydroxides from shallow freshwater pools (fungi) and subtidal muds (diatoms). Eukaryotic FAMEs were practically absent from low-pH, sulfide-rich intertidal zone sediments. The relative abundance of general microbial functional groups such as aerobes/anaerobes and gram(+)/gram(-) was not estimated due to severe inconsistency among the results obtained using several metrics reported in the literature. Principal component analyses (PCAs) were performed to investigate the relationship among samples as separate functions of water, sediment, and FAMEs data. PCAs based on water chemistry and FAMEs data resulted in similar relations among samples, whereas the PCA based on sediment chemistry produced a very different sample arrangement. Specifically, the sediment parameter PCA grouped samples with high bulk trace metal concentration regardless of whether the metals were incorporated into secondary precipitates or primary sulfides. The water chemistry PCA and FAMEs PCA appear to be less prone to this type of artifact. Signature lipids in sulfide-rich sediments could indicate the presence of acid-tolerant and/or acidophilic members of the genus Thiobacillus or they could indicate the presence of SO4-reducing bacteria. The microbial community documented in subtidal and offshore sediments is rich in SRB and/or facultative anaerobes of the Cytophaga-Flavobacterium group; both could reasonably be expected in PWS coastal environments. The results of this study provide evidence for substantial feedback between local (meter to centimeter-scale) geochemical variations, and sediment microbial community composition, and show that microbial community signatures in the intertidal zone are significantly altered at sites where ARD drainage is present relative to sites where it is not, even if the sediment geochemistry indicates net accumulation of ARD-generated trace metals in the intertidal zone. ?? 2007 Elsevier Ltd. All rights reserved.

Applied Geochemistry↗

Tire-derived contaminants 6PPD and 6PPD-Q: Analysis, sample handling, and reconnaissance of United States stream exposures

The environmental ubiquity of tire and road wear particles (TRWP) underscores the need to understand the occurrence, persistence, and environmental effects of tire-related chemicals in aquatic ecosystems. One such chemical is 6PPD-quinone (6PPD-Q), a transformation product of the tire antioxidant 6PPD. In urban stormwater runoff 6PPD-Q can exceed acute toxicity thresholds for several salmonid species and is being implicated in significant coho salmon losses in the Pacific Northwest. There is a critical need to understand the prevalence of 6PPD-Q across watersheds to identify habitats heavily affected by TRWPs. We conducted a reconnaissance of 6PPD and 6PPD-Q in surface waters across the United States from sites (N = 94) with varying land use (urban, agricultural, and forested) and streamflow to better understand stream exposures. A rapid, low-volume direct-inject, liquid chromatography mass spectrometry method was developed for the quantitation of 6PPD-Q and screening for 6PPD. Laboratory holding times, bottle material, headspace, and filter materials were investigated to inform best practices for 6PPD-Q sampling and analysis. Glass bottles with PTFE-lined caps minimized sorption and borosilicate glass fiber filters provided the highest recovery. 6PPD-Q was stable for at least 5 months in pure laboratory solutions and for 75 days at 5 °C with minimal headspace in the investigated surface water and stormwaters. Results also indicated samples can be frozen to extend holding times. 6PPD was not detected in any of the 526 analyzed samples and there were no detections of 6PPD-Q at agricultural or forested sites. 6PPD-Q was frequently detected in stormwater (57%, N = 90) and from urban impacted sites (45%, N = 276) with concentrations ranging from 0.002 to 0.29 μg/L. The highest concentrations, above the lethal level for coho salmon, occurred during stormwater runoff events. This highlights the importance of capturing episodic runoff events in urban areas near ecologically relevant habitat or nursery grounds for sensitive species.

Chemosphere↗

Water-quality trends in the Delaware River Basin calculated using multisource data and two methods for trend periods ending in 2018

Many organizations in the Delaware River Basin (DRB) monitor surface-water quality for regulatory, scientific, and decision-making purposes. In support of these purposes, over 260,000 water-quality records provided by 8 different organizations were compiled, screened, and used to generate water-quality trends in the DRB. These trends, for periods of record that end in 2018, were generated for 124 sites and up to 16 constituents using 2 trend methods: the Seasonal Kendall Test and the Weighted Regressions on Time, Discharge, and Season model. Seasonal Kendall Tests were performed on all water-quality records to detect monotonic trends in concentration over the period of record and for as many as four additional trend periods (1978–2018, 1998–2018, 2003–18, and 2008–18). The Weighted Regressions on Time, Discharge, and Season model was applied to water-quality records that passed more stringent screening criteria and was used to detect monontonic and nonmonotonic trends, account for variations in streamflow, and estimate annual concentrations. These two trend methods produced different trend directions less than 1 percent of the time, illustrating general agreement between the methods despite the different approaches and data input requirements. Overall, the changes in concentration for salinity constituents (specific conductance and total dissolved solids), chloride, and sodium were increases; those increases were some of the largest changes observed in the basin, and they occurred at faster rates over time. Total dissolved solids concentration trends at 4 of the 60 sites increased from below to above the level of concern threshold (a secondary drinking water threshold) over the period of record, indicating potentially meaningful degradation in water quality. Nutrient constituent (ammonia, nitrate, orthophosphate, total nitrogen, and total phosphorus) concentrations tended to decrease over the period of record, although fewer sites had significant trends and the changes in concentration were smaller compared to the salinity constituents. Total nitrogen and total phosphorus were the only nutrient constituents to have decreasing concentration trends that crossed from above to below the level of concern threshold, U.S. Environmental Protection Agency (EPA) ecoregional nutrient criteria, (EPA, undated c). This finding indicates water-quality improvement at sites with these trends (nine sites with total nitrogen trends and one site with a total phosphorus trend), although many sites were still in exceedance of the level of concern. Trends for total suspended solids and some major ions (calcium, magnesium, potassium) were largely nonsignificant or variable between sites, with no prevalent patterns across the DRB; however, sulfate concentrations decreased at most sites. Cumulative land-surface change within each watershed had a strong positive relation with changes in water-quality concentrations for the salinity constituents and most major ions, but not for the other constituents, indicating that land-surface changes are related to the sources and transport of these constituents. Investigating long-term trends (a decade or longer) in water quality can help the DRB water management community quantify the success of management practices and identify potential threats to water availability.

Delaware, New Jersey, New York, Pennsylvania↗

Spatio-temporal patterns and climate variables controlling of biomass carbon stock of global grassland ecosystems from 1982 to 2006

Grassland ecosystems play an important role in subsistence agriculture and the global carbon cycle. However, the global spatio-temporal patterns and environmental controls of grassland biomass are not well quantified and understood. The goal of this study was to estimate the spatial and temporal patterns of the global grassland biomass and analyze their driving forces using field measurements, Normalized Difference Vegetation Index (NDVI) time series from satellite data, climate reanalysis data, and a satellite-based statistical model. Results showed that the NDVI-based biomass carbon model developed from this study explained 60% of the variance across 38 sites globally. The global carbon stock in grassland aboveground live biomass was 1.05 Pg·C, averaged from 1982 to 2006, and increased at a rate of 2.43 Tg·C·y −1 during this period. Temporal change of the global biomass was significantly and positively correlated with temperature and precipitation. The distribution of biomass carbon density followed the precipitation gradient. The dynamics of regional grassland biomass showed various trends largely determined by regional climate variability, disturbances, and management practices (such as grazing for meat production). The methods and results from this study can be used to monitor the dynamics of grassland aboveground biomass and evaluate grassland susceptibility to climate variability and change, disturbances, and management.

Remote Sensing↗

Compilation and evaluation of data used to identify groundwater sources under the direct influence of surface water in Pennsylvania

A study was conducted to compile and evaluate data used to identify groundwater sources that are under the direct influence of surface water (GUDI) in Pennsylvania. In the early 1990s, the Pennsylvania Department of Environmental Protection (PADEP) implemented the Surface Water Identification Protocol (SWIP) for the identification of GUDI sources. Since the establishment of the SWIP, PADEP has classified more than 500 individual sources across Pennsylvania as GUDI, but Pennsylvania’s complex geology and physiography provide a challenge for a uniform method of GUDI determination. Components used in this study to compile and evaluate data associated with GUDI determination include: (1) a preliminary review of file information for 43 public water-supply wells, (2) quality control and addition of data to PADEP’s database for public water-supply systems to prepare data for analysis, and (3) exploratory evaluation of existing GUDI sources in the database with respect to hydrogeologic and source-construction characteristics that are currently utilized in the assessment methodology. Case files for 43 wells from PADEP’s Northcentral and Southcentral regions were reviewed to: (1) provide a better understanding of how the SWIP was applied in practice, (2) verify and compile missing data, and (3) find additional attributes not previously available that might explain a well’s categorization as GUDI. Review of file information showed that the SWIP outlined in PADEP technical guidance was usually followed, but for some sources, the GUDI determination was more complex and could not be easily summarized. Data compiled for study analyses provided by PADEP include source data derived from public water-supply system case files, a source-information database for public water-supply systems, and Microscopic Particulate Analysis (MPA) results and associated water-quality data for public water-supply system groundwater sources. Data from the Pennsylvania Drinking Water Information System (PADWIS) , which is PADEP’s database for public water-supply systems, were also used for this study. The PADWIS database originally included data for 12,147 groundwater sources (11,812 groundwater sources not under the direct influence of surface water (non-GUDI) wells and 335 GUDI wells). A subset (4,018 wells consisting of 3,842 non-GUDI wells and 175 GUDI wells) of the PADWIS database was created for an analysis and includes only community wells evaluated in accordance with the SWIP. MPA results for 631 community and noncommunity wells were compiled, along with associated water-quality data (alkalinity, chloride, Escherichia coli , fecal coliform, nitrate, pH, sodium, specific conductance, sulfate, total coliform, total dissolved solids, total residue, and turbidity) populated from the PADEP Bureau of Laboratories Sample Information System. Data compiled from sources other than PADEP include spatial data, both naturogenic (for example, average precipitation or distance to closest hydrologic feature) and anthropogenic (for example, percentage of developed or agricultural land cover within a specific vicinity of a public water-supply system well) data representing spatially derived variables. Comparison among wells in the PADWIS dataset subset using the nonparametric Kruskal-Wallis test showed that GUDI wells had significantly older median construction years, shallower depths, and static water levels closer to the land surface than non-GUDI wells and that carbonate aquifers had the highest percentages of wells designated as GUDI (12 percent; 57 wells). Further comparison of wells in the PADWIS database subset using the Spearman’s rho monotonic correlation test illustrated that public water-supply wells designated as GUDI largely occur in unconfined aquifers and have high average yield and shallow static water levels. Assessment of the MPA database subset using the Kruskal-Wallis test showed wells with MPA total risk-factor scores that exceeded zero had older median construction years and shallower casing depths than wells with MPA total risk-factor scores of zero and that carbonate aquifers had the highest percentages of wells with MPA total risk-factor scores exceeding zero (30 percent; 63 wells). Spearman’s rho correlations showed that wells completed in aquifers with depths to major water-bearing zones closer to the land-surface had higher total risk-factor scores resulting from MPA samples. Based on the results of the analyses described in this report, broad conclusions can be drawn regarding site-specific well characteristics as well as anthropogenic and naturogenic factors that could be responsible for a well being designated as GUDI, but the accuracy of these results is dependent on the quality of the data being analyzed. Ultimately, study results serve as an added resource for initial desktop screening of wells to determine if additional site-specific investigation is warranted and underscore the need for field evaluation.

Pennsylvania↗

Sources and transport of phosphorus and nitrogen during low-flow conditions in the Tualatin River, Oregon, 1991-93

In the 1980s significant nutrient-related water-quality problems that impacted beneficial uses were identified in the Tualatin River during the low-flow summer months, defined as .May 1 to October 31. Unsightly algal blooms resulted in fluctuations in oxygen concentrations and pH conditions; reduction of phosphorus concentrations was determined to the effective control mechanism for these conditions. Elevated ammonia concentrations also contributed to low oxygen concentrations. Because standards for beneficial uses were not being met, the Oregon Department of Environmental Quality established Total Maximum Daily Loads (TMDLs) for phosphorus and ammonia in the Tualatin Basin, as required by the Clean Water Act. To provide necessary context for the TMDL process, data were collected during the period 1991-93 to characterize the sources and transport of water, phosphorus, and major forms of nitrogen in the main-stem Tualatin River during the summer. A significant source of water to the river was not accounted for by surface-water inputs, and was consistent with direct discharge of ground water to the main-stem river channel. Ground water is also the primary source of water for the tributaries during the summer low-flow season. Because large natural supplies of highly mobile phosphorus exist in the upper 500 feet of valley-fill sediments throughout the Tualatin Basin, ground water in the basin is naturally enriched with phosphorus. While improvement in wastewater treatment efficiencies and land management practices have resulted in significant reductions in nutrient concentrations in the Tualatin River, phosphorus concentrations continue to exceed TMDL criterion concentrations. The presence of significant geologic sources of phosphorus in the basin will confound the achievement of current TMDL criteria for phosphorus in the Tualatin River and its tributaries. In contrast, natural sources of all forms of nitrogen to the Tualatin River are insignificant relative to the effluent from the wastewater treatment plants in the basin. Efficient wastewater treatment is, therefore, an effective means for controlling ammonia concentrations in the main-stem river.

Oregon↗