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At least 775 records · Page 43Linked to original sources

Luring anglers to enhance fisheries

Current fisheries management is, unfortunately, reactive rather than proactive to changes in fishery characteristics. Furthermore, anglers do not act independently on waterbodies, and thus, fisheries are complex socio-ecological systems . Proactive management of these complex systems necessitates an approach—adaptive fisheries management—that allows learning to occur simultaneously with management. A promising area for implementation of adaptive fisheries management is the study of luring anglers to or from specific waterbodies to meet management goals. Purposeful manipulation of anglers, and its associated field of study, is nonexistent in past management. Evaluation of different management practices (i.e., hypotheses) through an iterative adaptive management process should include both a biological and sociological survey to address changes in fish populations and changes in angler satisfaction related to changes in management. We believe adaptive management is ideal for development and assessment of management strategies targeted at angler participation. Moreover these concepts and understandings should be applicable to other natural resource users such as hunters and hikers.

Journal of Environmental Management↗

The role of satellite telemetry data in 21st century conservation of polar bears (Ursus maritimus)

Satellite telemetry (ST) has played a critical role in the management and conservation of polar bears ( Ursus maritimus ) over the last 50 years. ST data provide biological information relevant to subpopulation delineation, movements, habitat use, maternal denning, health, human-bear interactions, and accurate estimates of vital rates and abundance. Given that polar bears are distributed at low densities over vast and remote habitats, much of the information provided by ST data cannot be collected by other means. Obtaining ST data for polar bears requires chemical immobilization and application of a tracking device. Although immobilization has not been found to have negative effects beyond a several-day reduction in activity, over the last few decades opposition to immobilization and deployment of satellite-linked radio collars has resulted in a lack of current ST data in many of the 19 recognized polar bear subpopulations. Here, we review the uses of ST data for polar bears and evaluate its role in addressing 21 st century conservation and management challenges, which include estimation of sustainable harvest rates, understanding the impacts of climate warming, delineating critical habitat, and assessing potential anthropogenic impacts from tourism, resource development and extraction. We found that in subpopulations where ST data have been consistently collected, information was available to estimate vital rates and subpopulation density, document the effects of sea-ice loss, and inform management related to subsistence harvest and regulatory requirements. In contrast, a lack of ST data in some subpopulations resulted in increased bias and uncertainty in ecological and demographic parameters, which has a range of negative consequences. As sea-ice loss due to climate warming continues, there is a greater need to monitor polar bear distribution, habitat use, abundance, and subpopulation connectivity. We conclude that continued collection of ST data will be critically important for polar bear management and conservation in the 21 st century and that the benefits of immobilizing small numbers of individual polar bears in order to deploy ST devices significantly outweigh the risks.

Frontiers in Marine Science↗

Results of a workshop concerning assessment of the functions of bottomland hardwoods

The U.S. Environmental Protection Agency (EPA) is authorized under Section 404 of the Clean Water Act (33 U.S.C. 1344) to participate in the regulation of the discharge of dredged or fill material into waters of the United States. This regulatory authority is exercised in partnership with the U.S. Army Corps of Engineers, which has responsibility for permit issuance, and in consultation with the U.S. Fish and Wildlife Service and the National Marine Fisheries Service. Through amendments to the original statute, a series of legal actions and court decisions, and the development of operating guidance among the responsible agencies, Section 404 has evolved into the primary mechanism afforded Federal authorities for the protection of wetlands. EPA recognizes the importance of wetlands in achieving the goals of the Clean Water Act, which are to protect and maintain the chemical, physical, and biological integrity of the Nation’s waters. EPA Administrator Lee Thomas has identified wetlands protection as among the highest of Agency priorities. EPA recognizes that bottomland hardwood (BLH) wetlands have vital and unique attributes that, if lost, would severely impact the physical, chemical, and biological integrity of the Nation's waters. As part of a broad program to better protect the Nation's wetlands, EPA has therefore identified bottomland hardwood wetlands as a priority resource requiring special attention on a national basis. Recognizing the importance of implementing an effective, nationally consistent, and scientifically defensible regulatory program, EPA, in October 1984, issued Interim Operating Guidance to its field personnel for implementing the Section 404 regulatory program in bottomland hardwood wetlands. With the goal of improving and finalizing that guidance, EPA is sponsoring a series of workshops designed to answer key questions concerning BLH wetlands, based on the best scientific and technical information currently available. The first two workshops were directed toward summarizing existing scientific and technical knowledge concerning the functions of BLH ecosystems, the characteristics that are important to each function, and the impact of various development activities on those characteristics. The first workshop, which was held in St. Francisville, Louisiana, in December, 1984, examined a wetland zonation concept as a framework for gaining a greater understanding of BLH structure and function. The workshop set out to determine whether characterization of BLH resources as a series of relatively distinct zones, defined by concomitant variation in hydrologic regime, soils, and vegetation, might provide the basis for a useful and scientifically sound regulatory framework. For examp1e, if certain zones are of particular importance to one or more wetland functions that the Clean Water Act was intended to protect, then the zonation concept might be useful from the perspective of how various activities should be regulated. Discussions during the first workshop, however, indicated that the zonation concept provides, at best, only an incomplete picture of the structure and function of BLH ecosystems. In many cases, BLH functions are not limited to or closely correlated with particular zones and, furthermore, many factors other than zone are important determinants of BLH functions. With these responses in mind, the second workshop, held at Lake Lanier, Georgia, in July, 1985, was designed to elicit information on two questions. First, if zones are not an adequate framework for understanding the functions of BLH systems, what characteristics (predictors) can be used to assess the extent to which a particular site performs these functions? And second, what are the impacts of various development activities that often occur in BLH ecosystems on those characteristics and thus on the functions themselves? At the second workshop, individual workgroups dealing with particular subject areas (e.g., hydrology, water quality, fisheries, wildlife, ecosystem processes, and cultural/recreational/economic resources) were able to identify site characteristics that are important determinants of the performance of various functions. For example, the Hydrology Workgroup identified flood storage as one of three major hydrologic functions that BLH ecosystems perform. The workgroup then identified the most important characteristic (e.g., surface area of the site, soil saturation, and others) that determine flood storage and the likely impact of several common activities (e.g., conversion to soybean production and levee construction) on these characteristics. Some of the workgroups also provided estimates of the aggregate impact of activities, acting through all of the characteristics, on certain functions. The workgroups also identified key characteristics that could be used to identify high-value wetlands for various functions. In addition, the workgroups pointed out a number of topics needing further examination and discussion. First, all of the workgroups identified the need to develop the technical basis and information sources to address the problem of cumulative impacts in the regulatory process. Second, most of the workgroups noted the important of contextual variables in assessing the function of a particular site. For example, the location of a BLH site in relationship to other tracts of habitat is an important variable for many wildlife species. Similarly, the extent to which a site retains or transforms contaminants is depended not only on the characteristics of the site, but also on its position in a watershed relative to contaminant inputs. And finally, several of the workgroups pointed out that assessing the impact of an activity on a function is not as simple as "adding up" the impact on individual characteristics, but may depend instead on complex interactions among characteristics. Addressing these questions, as summarized in the objectives and discussions that follow, was the focus of the third workshop, the results of which are described in this report.

Report↗

Migration routes, foraging behavior, and site fidelity of loggerhead sea turtles (Caretta caretta) satellite tracked from a globally important rookery

The Archie Carr National Wildlife Refuge, Florida, USA (27.946°N, − 80.494°W) represents one of the largest loggerhead turtle ( Caretta caretta ) nesting sites in the Western Hemisphere. Surprisingly, little work has been conducted to determine females’ post-nesting migratory behavior and characteristics of their foraging areas. Between 2008 and 2017, satellite telemetry was used to trace the locations and movements of 45 post-nesting loggerhead turtles. A switching state-space model was employed to estimate the behavioral state of each location. Internesting, migrating and foraging activity periods were determined for 38 loggerheads based on the SSSM. Seven environmental variables were extracted from remote sensing imagery for each location to compare values among behaviors. Core primary foraging areas ranged in size from 5.89 to 4572.80 km 2 . Four foraging types (primary, secondary, seasonal, and loops) were observed. Most turtles resided at a primary foraging area year round. A few individuals conducted foraging loops away from a primary foraging area. Both seasonal and loop movements were associated with changes in sea surface temperature as turtles moved to avoid temperatures that could cause cold-stunning or mortality. Turtle size and nesting beach offshore currents may play a role in foraging area selection, and date of departure from the nesting beach may be linked to foraging destination. By making the connection among oceanic features, foraging areas, and the influence of environmental variables on these areas, it is possible to identify and characterize critically important feeding areas and migration corridors for loggerheads nesting on the east coast of Florida.

Marine Biology↗

Envisioning a national invasive species information framework

With a view toward creating a national Early Detection and Rapid Response Program (EDRR) program, the United States National Invasive Species Council Management Plan for 2016–2018 calls for a series of assessments of federal EDRR capacities, including the evaluation of “relevant federal information systems to provide the data and other information necessary for risk analyses/horizon scanning, rapid specimen identification, and rapid response planning.” This paper is a response to that directive. We provide an overview of information management needs for enacting EDRR and discuss challenges to meeting these needs. We then review the history of relevant US policy directives for advancing invasive species information systems and provide an overview of federal invasive species information system capacities, including current gaps and inconsistencies. We conclude with a summary of key principles and needs for establishing a national invasive species information framework. Our findings are consistent with earlier studies and, thus, emphasize the need to act on long-recognized needs. As a supplement to this paper, we have cataloged federal invasive species databases and information tools identified through this work.

Biological Invasions↗

Bull trout in the Boundary System: managing connectivity and the feasibility of a reintroduction in the lower Pend Oreille River, northeastern Washington

Many of the World’s rivers are influenced by large dams (>15 m high) most of which have fragmented formerly continuous habitats, and significantly altered fish passage, natural flow, temperature, and sediment fluxes (Nilsson and others, 2005; Arthington, 2012; Liermann and others, 2012). In the Pacific Northwest, dams on major rivers have been a major focus for fishery managers, primarily in regard to passage of anadromous salmonids (principally Pacific salmon and steelhead trout [ Oncorhynchus mykiss ], for example, Ferguson and others, 2011), but more recently other species, such as Pacific lamprey ( Entosphenus tridentatus ) and resident (non-anadromous) salmonids, are receiving more attention (Neraas and Spruell, 2001; Moser and others, 2002; Muhlfeld and others, 2012). In the case of resident salmonids, fish can adopt a wide range of migratory behaviors that often bring them into mainstem rivers where they can come into direct contact with large dams. When this occurs, some of the most important direct effects of dams on salmonids include barriers to upstream and downstream movement and mortality associated with entrainment within the dam or spill over dams. Biologically, these direct impacts can lead to (1) disruption of natural historical (pre-dam) genetic and demographic connectivity among local populations, (2) loss of access to historically used migratory destinations, (3) loss of individuals to the population through mortality associated with entrainment. In this report, we address these issues for the case of Boundary Dam, located immediately south of the Canadian border on the lower Pend Oreille River in northeastern Washington (fig. 1). Specifically, we addressed the following objectives: Evaluate the justification for bull trout ( Salvelinus confluentus ) passing over Boundary Dam in the context of likely historical patterns of gene flow that occurred prior to dam construction, current patterns of movement, and status of existing populations. Assess the role of passage over Boundary Dam, in the context of other factors in the system that may influence the feasibility of establishing a self-sustaining bull trout population in the Boundary system.

Washington↗

Characterization of fill deposits in the Calumet region of northwestern Indiana and northeastern Illinois

In October 1993, the U.S. Geological Survey, in cooperation with the U.S. Environmental Protection Agency, began a study of the fill deposits in the Calumet region of northwestern Indiana and northeastern Illinois. Fill in this area is a mixture of steel-industry wastes, other industrial waste, municipal solid waste, dredging spoil, construction debris, ash, cinders, natural materials, and biological sludge. Fill deposits are concentrated along Lake Michigan; from the Lake Calumet area to the east of the Indiana Harbor Canal; along the Calumet, Little Calumet, and Grand Calumet Rivers; and along the Calumet Sag Channel. Industrial wastes and municipal solid wastes are used as fill near Lake Calumet. Steel-industry wastes, primarily slag, are used as fill along Lake Michigan, Wolf Lake, Lake George, parts of Lake Calumet, and parts of the Calumet and Little Calumet Rivers. Dredging spoil is located along the rivers, and in abandoned river channels, landfills, and tailing ponds. Cinders, ash, construction debris, and natural materials are scattered throughout the area. Currently (1996), fill covers about 60.2 square miles of the study area. A total volume of about 2.1 x 1010 cubic feet of fill was calculated to be present in the Calumet region. Most of this fill is steel-industry waste. Fill deposition in the study area has been essentially continuous from about 1870 to the present (1996). Fill deposited before 1964 was used as foundation for streets and railroad tracks, to create land for industrial expansion, and to dispose of waste material. Much of the fill deposited after 1964 was disposed of in landfills designed to minimize environmental effects. Industrial wastes, municipal solid wastes, steel-industry wastes, and, perhaps, dredging spoil can be associated with increased concentrations of volatile and semivolatile organic compounds, pesticides, cyanide, metals, or major ions in ground water in this area. Construction debris, ash, cinders, and natural fill may be associated with increased concentrations of major ions in ground water.

Illinois, Indiana↗

Management of aspen in a changing environment

Aspen communities are biologically rich and ecologically valuable, yet they face myriad threats, including changing climate, altered fire regimes, and excessive browsing by domestic and wild ungulates. Recognizing the different types of aspen communities that occur in the Great Basin, and being able to distinguish between seral and stable aspen stands, can help managers better identify restoration needs and objectives. Identifying key threats to aspen regeneration and persistence in a given stand or landscape is important to designing restoration plans, and to selecting appropriate treatment types. Although some aspen stands will need intensive treatment (e.g., use of fire) to persist or remain healthy, other stands may only require the modification of current management practices (e.g., reducing livestock browsing) or may not require any action at all (e.g., self-replacing stable aspen communities).

Great Basin↗

Updates for Wake Atoll biosecurity management, biological control, survey, and management, and integrated pest management plans

Pests and invasive species have been defined as any organism that can have real or perceived adverse effects on operations, or the well-being of personnel, native plants, animals, their environment and ecosystem processes; attack or damage real property, supplies, equipment, or are otherwise undesirable (paraphrased from many sources including 53 Federal Register [FR] 15975, May 4, 1988, as amended at 78 FR 13507, February 28, 2013). Biosecurity programs and pest management plans can be developed and implemented with the goals of preventing the arrival of or eradication or control of pests and invasive species to reduce the potential for adverse effects. Such plans have been developed for Wake Atoll (U.S. Air Force, unpub. data 2017). Periodic plan reviews are an integral step for evaluating plan efficacy and updating plans with new information for improving plan effectiveness. This report summarizes an evaluation of past, current, and potential biosecurity and pest management for Wake with the intent this information can be used for updating existing plans. This document was prepared in cooperation with the U.S. Air Force (USAF) and surveys were performed for the 611th Civil Engineer Squadron Natural Resources Program ACES PROJECT no. YGFZ17002 under agreement number F2MUAA7116GW01 between the USAF and the U.S. Geological Survey’s Western Ecological Research Center (USGS-WERC).

Open-File Report↗

U.S. Geological Survey science strategy to address chronic wasting disease and cervid health in 2024–2028

Chronic wasting disease (CWD), a neurological disease similar to scrapie in goats and sheep, has been spreading since the 1960s throughout cervid populations in the United States. It is currently detected in 30 States and now also extends to Canada, Korea, and Scandinavia. CWD is a fatal disease caused by an infectious abnormally folded prion protein. Population-level effects of CWD on localized subpopulations of white-tailed deer ( Odocoileus virginianus ), mule deer ( Odocoileus hemionus ), and elk ( Cervus elaphus ) have been documented. While susceptible to CWD, free-ranging moose ( Alces alces ) and reindeer ( Rangifer tarandus ) populations do not currently appear to be as severely affected. The mission of the U.S. Geological Survey (USGS) Chronic Wasting Disease and Cervid Health Science Team is to deliver integrated science to build resiliency into free-ranging cervid populations through more effective management of CWD, build capacity for ungulate health science, and enhance cervid health information sharing across USGS science centers and cooperative research units as well as with stakeholders. The USGS can play an important role in supporting regional and (or) national capacity building by providing resources and guidance to local, State, and Tribal management entities and by providing tools to enhance disease management. The USGS Ecosystems Mission Area’s Biological Threats and Invasive Species Research Program (BTRP) is the lead Federal program for free-ranging wildlife disease research and surveillance. The BTRP is relied upon by Congress, as well as local, State, and Tribal partners, to provide quality science that allows for informed decisions to be made about wildlife disease policy, planning, and management. The information provided by our research gives policy makers and the public the understanding needed to improve management preparedness and response. This document describes the U.S. Geological Survey Science Strategy To Address Chronic Wasting Disease and Cervid Health. It lays out a 5-year science strategy (2024–2028) for continued USGS research to study CWD in free-ranging cervids and their environments. The strategy includes improving detection methods, advancing our understanding of the mechanisms of transmission, incorporating the human dimensions and socio-economic effects of CWD in scientific studies, developing tools for decision making, and understanding potential effects of this disease on ecosystem health.

Circular↗

Fish communities of the Sacramento River Basin: Implications for conservation of native fishes in the Central Valley, California

The associations of resident fish communities with environmental variables and stream condition were evaluated at representative sites within the Sacramento River Basin, California between 1996 and 1998 using multivariate ordination techniques and by calculating six fish community metrics. In addition, the results of the current study were compared with recent studies in the San Joaquin River drainage to provide a wider perspective of the condition of resident fish communities in the Central Valley of California as a whole. Within the Sacramento drainage, species distributions were correlated with elevational and substrate size gradients; however, the elevation of a sampling site was correlated with a suite of water-quality and habitat variables that are indicative of land use effects on physiochemical stream parameters. Four fish community metrics - percentage of native fish, percentage of intolerant fish, number of tolerant species, and percentage of fish with external anomalies - were responsive to environmental quality. Comparisons between the current study and recent studies in the San Joaquin River drainage suggested that differences in water-management practices may have significant effects on native species fish community structure. Additionally, the results of the current study suggest that index of biotic integrity-type indices can be developed for the Sacramento River Basin and possibly the entire Central Valley, California. The protection of native fish communities in the Central Valley and other arid environments continues to be a conflict between human needs for water resources and the requirements of aquatic ecosystems; preservation of these ecosystems will require innovative management strategies.

Environmental Biology of Fishes↗

Clinal variation or validation of a subspecies? A case study of the Graptemys nigrinoda complex (Testudines: Emydidae)

Widely distributed species often display intraspecific morphological variation due to the abiotic and biotic gradients experienced across their ranges. Historically, in many vertebrate taxa, such as birds and reptiles, these morphological differences within a species were used to delimit subspecies. Graptemys nigrinoda is an aquatic turtle species endemic to the Mobile Bay Basin. Colour pattern and morphological variability were used to describe a subspecies ( G. n. delticola ) from the lower reaches of the system, although it and the nominate subspecies also reportedly intergrade over a large portion of the range. Other researchers have suggested that these morphological differences merely reflect clinal variation. Our molecular data (mtDNA) did not support the existence of the subspecies, as the haplotypes were differentiated by only a few base pairs and one haplotype was shared between the putative subspecies. While there were significant morphological and pattern differences among putative specimens of G. n. nigrinoda, G. n. delticola and G. n. nigrinoda × delticola , these differences probably represent clinal variation as they were also related to environmental variables [i.e. cumulative drainage area and drainage (categorical)]. Specimens occupying slow-current, high-turbidity river reaches (e.g. the Tensaw River) exhibited greater relative carapace heights and more dark pigmentation, while specimens occupying fast-current, clearer rivers (e.g. the upper Alabama, Cahaba and Tallapoosa rivers) exhibited lower carapace heights and more yellow pigmentation. Given the absence of clear molecular and morphological differences that are related to drainage characteristics, we suggest that there is not sufficient evidence for the recognition of G. n. delticola as a distinct subspecies.

Alabama;Mississippi↗

Validation of adipose lipid content as a body condition index for polar bears

Body condition is a key indicator of individual and population health. Yet, there is little consensus as to the most appropriate condition index (CI), and most of the currently used CIs have not been thoroughly validated and are logistically challenging. Adipose samples from large datasets of capture biopsied, remote biopsied, and harvested polar bears were used to validate adipose lipid content as a CI via tests of accuracy, precision, sensitivity, biopsy depth, and storage conditions and comparisons to established CIs, to measures of health and to demographic and ecological parameters. The lipid content analyses of even very small biopsy samples were highly accurate and precise, but results were influenced by tissue depth at which the sample was taken. Lipid content of capture biopsies and samples from harvested adult females was correlated with established CIs and/or conformed to expected biological variation and ecological changes. However, lipid content of remote biopsies was lower than capture biopsies and harvested samples, possibly due to lipid loss during dart retrieval. Lipid content CI is a biologically relevant, relatively inexpensive and rapidly assessed CI and can be determined routinely for individuals and populations in order to infer large-scale spatial and long-term temporal trends. As it is possible to collect samples during routine harvesting or remotely using biopsy darts, monitoring and assessment of body condition can be accomplished without capture and handling procedures or noninvasively, which are methods that are preferred by local communities. However, further work is needed to apply the method to remote biopsies.

Ecology and Evolution↗

Aeolian dust in Colorado Plateau soils: Nutrient inputs and recent change in source

Aeolian dust (windblown silt and clay) is an important component in arid-land ecosystems because it may contribute to soil formation and furnish essential nutrients. Few geologic surfaces, however, have been characterized with respect to dust-accumulation history and resultant nutrient enrichment. We have developed a combination of methods to identify the presence of aeolian dust in arid regions and to evaluate the roles of this dust in ecosystem processes. Unconsolidated sandy sediment on isolated surfaces in the Canyonlands region of the Colorado Plateau differs greatly in mineralogical and chemical composition from associated bedrock, mainly aeolian sandstone. Detrital magnetite in the surficial deposits produces moderately high values of magnetic susceptibility, but magnetite is absent in nearby bedrock. A component of the surficial deposits must be aeolian to account for the abundance of magnetite, which formed originally in far-distant igneous rocks. Particle-size analysis suggests that the aeolian dust component is typically as much as 20–30%. Dust inputs have enriched the sediments in many elements, including P, Mg, Na, K, and Mo, as well as Ca, at sites where bedrock lacks calcite cement. Soil-surface biologic crusts are effective dust traps that apparently record a change in dust sources over the past several decades. Some of the recently fallen dust may result from human disturbance of land surfaces that are far from the Canyonlands, such as the Mojave Desert. Some land-use practices in the study area have the potential to deplete soil fertility by means of wind-erosion removal of aeolian silt. Many studies have addressed the presence of aeolian dust in soils and surficial deposits in deserts to provide important geologic and ecologic information bearing on landscape dynamics (1–16). From this body of work, we have improved understanding about: ( i ) current and past sources and flux of dust, hence changing conditions of dust emission; ( ii ) the genesis of desert soils; ( iii ) the influences of aeolian silt and clay on water-infiltration rates in soil; ( iv ) the evolution of desert surfaces (such as desert pavement) relevant to surface stability, as well as the distribution of surface and subsurface water; and ( v ) interrelations among aeolian dust, distribution of plants and soil crust, rain-water runoff, and productivity. Nevertheless, we lack fundamental knowledge about the accumulation history of aeolian dust on most landscapes and about how to discriminate between contributions from parent material and aeolian dust to the biotic system. Although many different methods provide clear evidence for aeolian input into soils (4, 6, 8, 9, 11, 13, 17, 18), ecosystem studies would benefit from rapid assessment of aeolian components in soils. Here we demonstrate that magnetic methods, which characterize the type and distribution of iron oxide minerals, can be applied to detect the presence of aeolian dust in young surficial sediments and soils over large arid-land areas. The magnetic results, combined with geochemical and textural analyses, form a basis for understanding the influence of fine-grained aeolian inputs on soil fertility of the central Colorado Plateau, Utah.

Utah↗

Hydrologic, water-quality, and biological assessment of Laguna de las Salinas, Ponce, Puerto Rico, January 2003-September 2004

The Laguna de Las Salinas is a shallow, 35-hectare, hypersaline lagoon (depth less than 1 meter) in the municipio of Ponce, located on the southern coastal plain of Puerto Rico. Hydrologic, water-quality, and biological data in the lagoon were collected between January 2003 and September 2004 to establish baseline conditions. During the study period, rainfall was about 1,130 millimeters, with much of the rain recorded during three distinct intense events. The lagoon is connected to the sea by a shallow, narrow channel. Subtle tidal changes, combined with low rainfall and high evaporation rates, kept the lagoon at salinities above that of the sea throughout most of the study. Water-quality properties measured on-site (temperature, pH, dissolved oxygen, specific conductance, and Secchi disk transparency) exhibited temporal rather than spatial variations and distribution. Although all physical parameters were in compliance with current regulatory standards for Puerto Rico, hyperthermic and hypoxic conditions were recorded during isolated occasions. Nutrient concentrations were relatively low and in compliance with current regulatory standards (less than 5.0 and 1.0 milligrams per liter for total nitrogen and total phosphorus, respectively). The average total nitrogen concentration was 1.9 milligrams per liter and the average total phosphorus concentration was 0.4 milligram per liter. Total organic carbon concentrations ranged from 12.0 to 19.0 milligrams per liter. Chlorophyll a was the predominant form of photosynthetic pigment in the water. The average chlorophyll a concentration was 13.4 micrograms per liter. Chlorophyll b was detected (detection limits 0.10 microgram per liter) only twice during the study. About 90 percent of the primary productivity in the Laguna de Las Salinas was generated by periphyton such as algal mats and macrophytes such as seagrasses. Of the average net productivity of 13.6 grams of oxygen per cubic meter per day derived from the diel study, the periphyton and macrophyes produced 12.3 grams per cubic meter per day; about 1.3 grams (about 10 percent) were produced by the phytoplankton (plant and algae component of plankton). The total respiration rate was 59.2 grams of oxygen per cubic meter per day. The respiration rate ascribed to the plankton (all organisms floating through the water column) averaged about 6.2 grams of oxygen per cubic meter per day (about 10 percent), whereas the respiration rate by all other organisms averaged 53.0 grams of oxygen per cubic meter per day (about 90 percent). Plankton gross productivity was 7.5 grams per cubic meter per day; the gross productivity of the entire community averaged 72.8 grams per cubic meter per day. Fecal coliform bacteria counts were generally less than 200 colonies per 100 milliliters; the highest concentration was 600 colonies per 100 milliliters.

Scientific Investigations Report↗

Influence of estuarine processes on spatiotemporal variation in bioavailable selenium

Dynamic processes (physical, chemical and biological) challenge our ability to quantify and manage the ecological risk of chemical contaminants in estuarine environments. Selenium (Se) bioavailability (defined by bioaccumulation), stable isotopes and molar carbon-tonitrogen ratios in the benthic clam Potamocorbula amurensis, an important food source for predators, were determined monthly for 17 yr in northern San Francisco Bay. Se concentrations in the clams ranged from a low of 2 to a high of 22 μg g -1 over space and time. Little of that variability was stochastic, however. Statistical analyses and preliminary hydrodynamic modeling showed that a constant mid-estuarine input of Se, which was dispersed up- and down-estuary by tidal currents, explained the general spatial patterns in accumulated Se among stations. Regression of Se bioavailability against river inflows suggested that processes driven by inflows were the primary driver of seasonal variability. River inflow also appeared to explain interannual variability but within the range of Se enrichment established at each station by source inputs. Evaluation of risks from Se contamination in estuaries requires the consideration of spatial and temporal variability on multiple scales and of the processes that drive that variability.

Marine Ecology Progress Series↗

Supporting the development and use of native plant materials for restoration on the Colorado Plateau (Fiscal Year 2020 Report)

A primary focus of the Colorado Plateau Native Plant Program (CPNPP) is to identify and develop appropriate native plant materials (NPMs) for current and future restoration projects. Multiple efforts have characterized the myriad challenges inherent in providing appropriate seed resources to enable effective, widespread restoration and have identified a broad suite of research activities to provide the information necessary to overcome those challenges (e.g., Plant Conservation Alliance 2015; Breed et al. 2018; Winkler et al. 2018). Many of the most complex information needs relate to identifying the appropriate sources of plant species that can successfully establish in dryland environments, like the Colorado Plateau, where precipitation is generally low and highly variable. Providing this information requires synergistic research efforts that build upon insight gained from earlier investigations. The U.S. Geological Survey (USGS) Southwest Biological Science Center’s (SBSC’s) research activities that supported CPNPP in FY20 followed the FY20 Statement of Work to support a research framework that is continually adapting based on the needs of the restoration community and results from previous investigations; the long-term research framework is outlined in the 2019-2023 5-Year Research Strategy (hereafter referred to as the 5-year plan). This research framework provides support for the National Seed Strategy for Rehabilitation and Restoration (Plant Conservation Alliance, 2015), Department of Interior Secretarial Order #3347 ( Conservation Stewardship and Outdoor Recreation ), and Bureau of Land Management Leadership Priority #1 ( Create a conservation stewardship legacy second only to Teddy Roosevelt ). Research activities in FY20 centered on landscape genomics, implementing a common garden experiment near Vernal, UT, conducting experimental treatments using the GRID (Germination for Restoration Information and Decision-making) framework, and collecting seeds and leaf tissues in the field in preparation for future experiments. These activities were supported by five biological science technicians. The SARS-CoV-2 pandemic delayed some aspects of the FY20 workplan, especially for contract laboratory services and the construction of the GRID garden in Flagstaff, AZ. However, goals were largely met, and the overall progress of research remains on track with respect to the 5-year plan. While Dr. Rob Massatti was the only scientist supported by the SBSC-CPNPP agreement in FY20, other scientists, including Drs. John Bradford, Seth Munson, Mike Duniway, Sasha Reed, Matt Jones, and Daniel Winkler, spent a considerable amount of time providing expertise and support for individual projects. Work activities performed in support of each goal are discussed in turn.

Arizona, Colorado, New Mexico, Utah↗

Evaluation of long-term trends in hydrologic and water-quality conditions, and estimation of water budgets through 2013, Chester County, Pennsylvania

An evaluation of trends in hydrologic and water quality conditions and estimation of water budgets through 2013 was done by the U.S. Geological Survey in cooperation with the Chester County Water Resources Authority. Long-term hydrologic, meteorologic, and biologic data collected in Chester County, Pennsylvania, which included streamflow, groundwater levels, surface-water quality, biotic integrity, precipitation, and air temperature were analyzed to determine possible trends or changes in hydrologic conditions. Statistically significant trends were determined by applying the Kendall rank correlation test; the magnitudes of the trends were determined using the Sen slope estimator. Water budgets for eight selected watersheds were updated and a new water budget was developed for the Marsh Creek watershed. An average water budget for Chester County was developed using the eight selected watersheds and the new Marsh Creek water budget. Annual and monthly mean streamflow, base flow, and runoff were analyzed for trends at 10 streamgages. The periods of record at the 10 streamgages ranged from 1961‒2013 to 1988‒2013. The only statistically significant trend for annual mean streamflow was for West Branch Brandywine Creek near Honey Brook, Pa. (01480300) where annual mean streamflow increased 1.6 cubic feet per second (ft 3 /s) per decade. The greatest increase in monthly mean streamflow was for Brandywine Creek at Chadds Ford, Pa. (01481000) for December; the increase was 47 ft 3 /s per decade. No statistically significant trends in annual mean base flow or runoff were determined for the 10 streamgages. The greatest increase in monthly mean base flow was for Brandywine Creek at Chadds Ford, Pa. (01481000) for December; the increase was 26 ft 3 /s per decade. The magnitude of peaks greater than a base streamflow was analyzed for trends for 12 streamgages. The period of record at the 12 stream gages ranged from 1912‒2012 to 2004–11. Fifty percent of the streamgages showed a small statistically significant increase in peaks greater than the base streamflow. The greatest increase was for Brandywine Creek at Chadds Ford, Pa. (01481000) during 1962‒2012; the increase was 1.8 ft 3 /s per decade. There were no statistically significant trends in the number of floods equal to or greater than the 2-year recurrence interval flood flow. Twenty‒one monitoring wells were evaluated for statistically significant trends in annual mean water level, minimum annual water level, maximum annual water level, and annual range in water-level fluctuations. For four wells, a small statistically significant increase in annual mean water level was determined that ranged from 0.16 to 0.7 feet per decade. There was poor or no correlation between annual mean groundwater levels and annual mean streamflow and base flow. No correlation was determined between annual mean groundwater level and annual precipitation. Despite rapid population growth and land-use change since 1950, there appears to have been little or no detrimental effects on groundwater levels in 21 monitoring wells. Long-term precipitation and temperature data were available from the West Chester (1893‒2013) and Phoenixville, Pa. (1915‒2013) National Oceanic and Atmospheric Administration (NOAA) weather stations. No statistically significant trends in annual mean precipitation or annual mean temperature were determined for either station. Both weather stations had a significant decrease in the number of days per year with precipitation greater than or equal to 0.1 inch. Annual mean minimum and maximum temperatures from the NOAA Southeastern Piedmont Climate Division increased 0.2 degrees Fahrenheit (F) per decade between 1896 and 2014. The number of days with a maximum temperature equal to or greater than 90 degrees F increased at West Chester and decreased at Phoenixville. No statistically significant trend was determined for annual snowfall amounts. Data from 1974 to 2013 for three stream water-quality monitors in the Brandywine Creek watershed were evaluated. The monitors are on the West Branch Brandywine Creek at Modena, Pa. (01480617), East Branch Brandywine Creek below Downingtown, Pa. (01480870), and Brandywine Creek at Chadds Ford, Pa. (01481000). Statistically significant upward trends were determined for annual mean specific conductance at all three stations, indicating the total dissolved solids load has been increasing. If the current trend continues, the annual mean specific conductance could almost double from 1974 to 2050. The increase in specific conductance likely is due to increases in chloride concentrations, which have been increasing steadily over time at all three stations. No correlation was found between monthly mean specific conductance and monthly mean streamflow or base flow. Statistically significant upward trends in pH were determined for all three stations. Statistically significant upward trends in stream temperature were determined for East Branch Brandywine Creek below Downingtown, Pa. (01480870) and Brandywine Creek at Chadds Ford, Pa. (01481000). The stream water-quality data indicate substantial increases in the minimum daily dissolved oxygen concentrations in the Brandywine Creek over time. The Chester County Index of Biotic Integrity (CC-IBI) determined for 1998‒2013 was evaluated for the five biological sampling sites collocated with streamgages. CC-IBI scores are based on a 0‒100 scale with higher scores indicating better stream quality. Statistically significant upward trends in the CC-IBI were determined for West Branch Brandywine Creek at Modena, Pa. (01480617) and East Branch Brandywine Creek below Downingtown, Pa. (01480870). No correlation was found between the CC-IBI and streamflow, precipitation, or stream specific conductance, pH, temperature, or dissolved oxygen concentration. A Chester County average water budget was developed using the nine estimated watershed water budgets. Average precipitation was 48.4 inches, and average streamflow was 21.4 inches. Average runoff and base flow were 8.3 and 13.1 inches, respectively, and average evapotranspiration and estimation of errors was 27.2 inches."

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