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USGS2018

SWToolbox: A surface-water tool-box for statistical analysis of streamflow time series

This report is a user guide for the low-flow analysis methods provided with version 1.0 of the Surface Water Toolbox (SWToolbox) computer program. The software combines functionality from two software programs—U.S. Geological Survey (USGS) SWSTAT and U.S. Environmental Protection Agency (EPA) DFLOW. Both of these programs have been used primarily for computation of critical low-flow statistics. The main analysis methods are the computation of hydrologic frequency statistics such as the 7-day minimum flow that occurs on average only once every 10 years (7Q10), computation of design flows including biologically based flows, and computation of flow-duration curves and duration hydrographs. Other annual, monthly, and seasonal statistics can also be computed. The interface facilitates retrieval of streamflow discharge data from the USGS National Water Information System and outputs text reports for a record of the analysis. Tools for graphing data and screening tests are available to assist the analyst in conducting the analysis.

Techniques and Methods↗

USGS2008

Determination of human-health pharmaceuticals in filtered water by chemically modified styrene-divinylbenzene resin-based solid-phase extraction and high-performance liquid chromatography/Mass Spectrometry

In 1999, the Methods Research and Development Program of the U.S. Geological Survey National Water Quality Laboratory began the process of developing a method designed to identify and quantify human-health pharmaceuticals in four filtered water-sample types: reagent water, ground water, surface water minimally affected by human contributions, and surface water that contains a substantial fraction of treated wastewater. Compounds derived from human pharmaceutical and personal-care product use, which enter the environment through wastewater discharge, are a newly emerging area of concern; this method was intended to fulfill the need for a highly sensitive and highly selective means to identify and quantify 14 commonly used human pharmaceuticals in filtered-water samples. The concentrations of 12 pharmaceuticals are reported without qualification; the concentrations of two pharmaceuticals are reported as estimates because long-term reagent-spike sample recoveries fall below acceptance criteria for reporting concentrations without qualification. The method uses a chemically modified styrene-divinylbenzene resin-based solid-phase extraction (SPE) cartridge for analyte isolation and concentration. For analyte detection and quantitation, an instrumental method was developed that used a high-performance liquid chromatography/mass spectrometry (HPLC/MS) system to separate the pharmaceuticals of interest from each other and coextracted material. Immediately following separation, the pharmaceuticals are ionized by electrospray ionization operated in the positive mode, and the positive ions produced are detected, identified, and quantified using a quadrupole mass spectrometer. In this method, 1-liter water samples are first filtered, either in the field or in the laboratory, using a 0.7-micrometer (μm) nominal pore size glass-fiber filter to remove suspended solids. The filtered samples then are passed through cleaned and conditioned SPE cartridges at a rate of about 15 milliliters per minute. Excess water is eliminated from the cartridge sorbent bed by passing air through the cartridges, and the analytes retained on the SPE bed are eluted from the cartridge sequentially, first with methanol, followed by acidified methanol, and combined in collection tubes. This sample extract then is reduced from about 10 milliliters (mL) to about 0.1 mL (or 100 microliters) under a stream of purified nitrogen gas with the collection tubes in a heated (40°C) water bath. The reduced extracts then are fortified with an internal standard solution (when using internal standard quantitation), brought to a final volume of 1 mL with an aqueous ammonium formate buffer solution, and filtered through a 0.2-μm Teflon syringe filter as they are transferred into vials for instrumental analysis. Instrumental analysis by the HPLC/MS procedure permits determination of individual pharmaceutical concentrations from 0.005 to 1.0 microgram per liter, based on the lowest and the highest calibration standards routinely used. The reporting levels for this method are compound dependent, and have been experimentally determined based on the precision of quantitation of compounds from eight fortified organic-free water samples in single-operator experiments. The method detection limits and interim reporting levels for the compounds determined by this method were calculated from recoveries of the pharmaceuticals from reagent-water samples amended at 0.05 microgram per liter, and ranged between 0.0069 and 0.0142 microgram per liter, and 0.015 and 0.10 microgram per liter, respectively. Concentrations for 12 compounds are reported without qualification, and for two compounds are reported as qualified estimates. After initial development, the method was applied to more than 1,800 surface-, ground-, and wastewater samples from 2002 to 2005 and documented in a number of published studies. This research application of the method provided the opportunity to collect a large data set of ambient environmental concentrations and also permitted the collection of an extensive set of reagent blanks and spike quality-control (QC) samples. This multiple-year set of QC samples enabled further evaluation of method performance under multiple operator and multiple instrument conditions typical of routine laboratory operation. These results are an important part of the entire data set contained in this report because they document method performance over an extended time. Because sample matrix can substantially affect method performance, inclusion of environmental matrix-spike samples is required as a routine component of study plan quality control. Method performance has been measured by long-term tracking of observed recoveries from fortified organic-free water samples processed with environmental samples (laboratory reagent spikes), as well as by observed recoveries from multiple fortified environmental water samples. The fortified environmental samples included surface water, wastewater effluent-dominated surface water, and ground water, fortified at two environmentally relevant concentrations and corrected for ambient environmental concentrations. Because the responses of individual pharmaceuticals vary as a function of proton affinity, the ionization efficiency, and thus relative response, of each pharmaceutical, the quality-control surrogate compounds, and the quantitation internal standard can be suppressed or enhanced by the presence of the sample matrix. As a result, several quality-control sample types are required to properly interpret the ambient environmental concentrations of pharmaceuticals in aqueous samples. The quality-control sample types and results include laboratory reagent spikes and laboratory reagent blanks to provide insight into the performance of the method in the absence of a sample matrix, and matrix-spike recovery samples and replicate environmental samples, collected from representative sample matrix types within the aquatic system under study.

Techniques and Methods↗

USGS2022

Working toward a National Coordinated Soil Moisture Monitoring Network: Vision, progress, and future directions

Soil moisture is a critical land surface variable, impacting the water, energy, and carbon cycles. While in situ soil moisture monitoring networks are still developing, there is no cohesive strategy or framework to coordinate, integrate, or disseminate these diverse data sources in a synergistic way that can improve our ability to understand climate variability at the national, state, and local levels. Thus, a national strategy is needed to guide network deployment, sustainable network operation, data integration and dissemination, and user-focused product development. The National Coordinated Soil Moisture Monitoring Network (NCSMMN) is a federally led, multi-institution effort that aims to address these needs by capitalizing on existing wide-ranging soil moisture monitoring activities, increasing the utility of observational data, and supporting their strategic application to the full range of decision-making needs. The goals of the NCSMMN are to 1) establish a national “network of networks” that effectively demonstrates data integration and operational coordination of diverse in situ networks; 2) build a community of practice around soil moisture measurement, interpretation, and application—a “network of people” that links data providers, researchers, and the public; and 3) support research and development (R&D) on techniques to merge in situ soil moisture data with remotely sensed and modeled hydrologic data to create user-friendly soil moisture maps and associated tools. The overarching mission of the NCSMMN is to provide coordinated high-quality, nationwide soil moisture information for the public good by supporting applications like drought and flood monitoring, water resource management, agricultural and forestry planning, and fire danger ratings.

Bulletin of the American Meteorological Society↗

USGS2007

Thermal Methods for Investigating Ground-Water Recharge

Recharge of aquifers within arid and semiarid environments is defined as the downward flux of water across the regional water table. The introduction of recharging water at the land surface can occur at discreet locations, such as in stream channels, or be distributed over the landscape, such as across broad interarroyo areas within an alluvial ground-water basin. The occurrence of recharge at discreet locations is referred to as focused recharge, whereas the occurrence of recharge over broad regions is referred to as diffuse recharge. The primary interest of this appendix is focused recharge, but regardless of the type of recharge, estimation of downward fluxes is essential to its quantification. Like chemical tracers, heat can come from natural sources or be intentionally introduced to infer transport properties and aquifer recharge. The admission and redistribution of heat from natural processes such as insolation, infiltration, and geothermal activity can be used to quantify subsurface flow regimes. Heat is well suited as a ground-water tracer because it provides a naturally present dynamic signal and is relatively harmless over a useful range of induced perturbations. Thermal methods have proven valuable for recharge investigations for several reasons. First, theoretical descriptions of coupled water-and-heat transport are available for the hydrologic processes most often encountered in practice. These include land-surface mechanisms such as radiant heating from the sun, radiant cooling into space, and evapotranspiration, in addition to the advective and conductive mechanisms that usually dominate at depth. Second, temperature is theoretically well defined and readily measured. Third, thermal methods for depths ranging from the land surface to depths of hundreds of meters are based on similar physical principles. Fourth, numerical codes for simulating heat and water transport have become increasingly reliable and widely available. Direct measurement of water flux in the subsurface is difficult, prompting investigators to pursue indirect methods. Geophysical approaches that exploit the coupled relation between heat and water transport provide an attractive class of methods that have become widely used in investigations of recharge. This appendix reviews the application of heat to the problem of recharge estimation. Its objective is to provide a fairly complete account of the theoretical underpinnings together with a comprehensive review of thermal methods in practice. Investigators began using subsurface temperatures to delineate recharge areas and infer directions of ground-water flow around the turn of the 20th century. During the 1960s, analytical and numerical solutions for simplified heat- and fluid-flow problems became available. These early solutions, though one-dimensional and otherwise restricted, provided a strong impetus for applying thermal methods to problems of liquid and vapor movement in systems ranging from soils to geothermal reservoirs. Today?s combination of fast processors, massive data-storage units, and efficient matrix techniques provide numerical solutions to complex, three-dimensional transport problems. These approaches allow researchers to take advantage of the considerable information content routinely achievable in high-accuracy temperature work.

Professional Paper↗

USGS2008

Monitoring fine-grained sediment in the Colorado River ecosystem, Arizona — Control network and conventional survey techniques

In 2002, fine-grained sediment (sand, silt, and clay) monitoring in the Colorado River downstream from Glen Canyon Dam was initiated to survey channel topography at scales previously unobtainable in this canyon setting. This report presents the methods used to establish the high-resolution global positioning system (GPS) control network required for this effort as well as the conventional surveying techniques used in the study. Using simultaneous, dual-frequency GPS vector-based methods, the network points were determined to have positioning accuracies of less than 0.03 meters (m) and ellipsoidal height accuracies of between 0.01 and 0.10 m at a 95-percent degree of confidence. We also assessed network point quality with repeated, electronic (optical) total-station observations at 39 points for a total of 362 measurements; the mean range was 0.022 m in horizontal and 0.13 in vertical at a 95-percent confidence interval. These results indicate that the control network is of sufficient spatial and vertical accuracy for collection of airborne and subaerial remote-sensing technologies and integration of these data in a geographic information system on a repeatable basis without anomalies. The monitoring methods were employed in up to 11 discrete reaches over various time intervals. The reaches varied from 1.3 to 6.4 kilometers in length. Field results from surveys in 2000, 2002, and 2004 are described, during which conventional surveying was used to collect more than 3000 points per day. Ground points were used as checkpoints and to supplement areas just below or above the water surface, where remote-sensing data are not collected or are subject to greater error. An accuracy of +or- 0.05 m was identified as the minimum precision of individual ground points. These results are important for assessing digital elevation model (DEM) quality and identifying detection limits of significant change among surfaces generated from remote-sensing technologies.

Arizona↗

USGS2010

Attributes for NHDPlus Catchments (Version 1.1) in the Conterminous United States: Artificial Drainage (1992) and Irrigation Types (1997)

This tabular dataset represents the estimated area of artificial drainage for the year 1992 and irrigation types for the year 1997 compiled for every catchment of NHDPlus for the conterminous United States. The source datasets were derived from tabular National Resource Inventory (NRI) datasets created by the National Resources Conservation Service (NRCS, U.S. Department of Agriculture, 1995, 1997). Artificial drainage is defined as subsurface drains and ditches. Irrigation types are defined as gravity and pressure. Subsurface drains are described as conduits, such as corrugated plastic tubing, tile, or pipe, installed beneath the ground surface to collect and/or convey drainage. Surface drainage field ditches are described as graded ditches for collecting excess water. Gravity irrigation source is described as irrigation delivered to the farm and/or field by canals or pipelines open to the atmosphere; and water is distributed by the force of gravity down the field by: (1) A surface irrigation system (border, basin, furrow, corrugation, wild flooding, etc.) or (2) Sub-surface irrigation pipelines or ditches. Pressure irrigation source is described as irrigation delivered to the farm and/or field in pump or elevation-induced pressure pipelines, and water is distributed across the field by: (1) Sprinkle irrigation (center pivot, linear move, traveling gun, side roll, hand move, big gun, or fixed set sprinklers), or (2) Micro irrigation (drip emitters, continuous tube bubblers, micro spray or micro sprinklers). NRI data do not include Federal lands and are thus excluded from this dataset. The tabular data for drainage were spatially apportioned to the National Land Cover Dataset (NLCD, Kerie Hitt, written commun., 2005) and the tabular data for irrigation were spatially apportioned to an enhanced version of the National Land Cover Dataset (NLCDe, Nakagaki and others 2007) The NHDPlus Version 1.1 is an integrated suite of application-ready geospatial datasets that incorporates many of the best features of the National Hydrography Dataset (NHD) and the National Elevation Dataset (NED). The NHDPlus includes a stream network (based on the 1:100,00-scale NHD), improved networking, naming, and value-added attributes (VAAs). NHDPlus also includes elevation-derived catchments (drainage areas) produced using a drainage enforcement technique first widely used in New England, and thus referred to as "the New England Method." This technique involves "burning in" the 1:100,000-scale NHD and when available building "walls" using the National Watershed Boundary Dataset (WBD). The resulting modified digital elevation model (HydroDEM) is used to produce hydrologic derivatives that agree with the NHD and WBD. Over the past two years, an interdisciplinary team from the U.S. Geological Survey (USGS), and the U.S. Environmental Protection Agency (USEPA), and contractors, found that this method produces the best quality NHD catchments using an automated process (USEPA, 2007). The NHDPlus dataset is organized by 18 Production Units that cover the conterminous United States. The NHDPlus version 1.1 data are grouped by the U.S. Geological Survey's Major River Basins (MRBs, Crawford and others, 2006). MRB1, covering the New England and Mid-Atlantic River basins, contains NHDPlus Production Units 1 and 2. MRB2, covering the South Atlantic-Gulf and Tennessee River basins, contains NHDPlus Production Units 3 and 6. MRB3, covering the Great Lakes, Ohio, Upper Mississippi, and Souris-Red-Rainy River basins, contains NHDPlus Production Units 4, 5, 7 and 9. MRB4, covering the Missouri River basins, contains NHDPlus Production Units 10-lower and 10-upper. MRB5, covering the Lower Mississippi, Arkansas-White-Red, and Texas-Gulf River basins, contains NHDPlus Production Units 8, 11 and 12. MRB6, covering the Rio Grande, Colorado and Great Basin River basins, contains NHDPlus Production Units 13, 14, 15 and 16. MRB7, covering the Pacific Northwest River basins, contains NHDPlus Production Unit 17. MRB8, covering California River basins, contains NHDPlus Production Unit 18.

Data Series↗

USGS1999

Assessing biological effects from highway-runoff constituents

Increased emphasis on evaluation of nonpoint-source pollution has intensified the need for techniques that can be used to discern the toxicological effects of complex chemical mixtures. In response, the use of biological assessment techniques is receiving increased regulatory emphasis. When applied with documented habitat assessment and chemical analysis, these techniques can increase our understanding of the influence of environmental contaminants on the biological integrity and ecological function of aquatic communities. The contaminants of greatest potential concern in highway runoff are those that arise from highway construction, maintenance, and use. The major contaminants of interest are deicers; nutrients; metals; petroleum-related organic compounds, such as polycyclic aromatic hydrocarbons (PAHs), benzene, toluene, ethylbenzene, and xylene (BTEX), and methyl tert -butyl ether (MTBE); sediment washed off the road surface; and agricultural chemicals used in highway maintenance. Hundreds, if not thousands, of biological endpoints (measurable responses of living organisms) may be either directly or associatively affected by contaminant exposure. Measurable effects can occur throughout ecosystem processes across the wide range of biological complexity, ranging from responses at the biochemical level to the community level. The challenge to the environmental scientist is to develop an understanding of the relationship of effects at various levels of biological organization in order to determine whether a causal relationship exists between chemical exposure and substantial ecological impairment. This report provides a brief history of the evolution of biological assessment techniques, a description of the major classes of contaminants that are of particular interest in highway runoff, an overview of representative biological assessment techniques, and a discussion of data-quality considerations. Published reports with a focus on the effects of highway runoff on the local ecosystem were reviewed to provide information on (1) the suitability of the existing data for a quantitative national synthesis, (2) the methods available to study the effects of highway runoff on local ecosystems, and (3) the potential for adverse effects on the roadside environment and receiving waters. Although many biological studies have been done, the use of different methods and a general lack of sufficient documentation precludes a quantitative national synthesis on the basis of the existing data. The Federal Highway Administration, the U.S. Environmental Protection Agency, the U.S. Geological Survey, the Intergovernmental Task Force on Monitoring Water Quality, and the National Resources Conservation Service all have developed and documented methods for assessing the effects of contaminants on ecosystems in receiving waters. These published methods can be used to formulate a set of protocols to provide consistent information from highway-runoff studies. Review of the literature indicates (qualitatively) that highway runoff (even from highways with high traffic volume) may not usually be acutely toxic. Tissue analysis and community assessments, however, indicate effects from highway- runoff sediments near discharge points (even from sites near highways with relatively low traffic volumes). At many sites, elevated concentrations of highway-runoff constituents were measured in tissues of species associated with aquatic sediments. Community assessments also indicate decreases in the diversity and productivity of aquatic ecosystems at some sites receiving highway runoff. These results are not definitive, however, and depend on many site-specific criteria that were not sufficiently documented in most of the studies reviewed.

Open-File Report↗

USGS2003

Sources of sulfate supporting anaerobic metabolism in a contaminated aquifer

Field and laboratory techniques were used to identify the biogeochemical factors affecting sulfate reduction in a shallow, unconsolidated alluvial aquifer contaminated with landfill leachate. Depth profiles of 35 S-sulfate reduction rates in aquifer sediments were positively correlated with the concentration of dissolved sulfate. Manipulation of the sulfate concentration in samples revealed a Michaelis−Menten-like relationship with an apparent K m and V max of approximately 80 and 0.83 μM SO 4 - 2 ·day - 1 , respectively. The concentration of sulfate in the core of the leachate plume was well below 20 μM and coincided with very low reduction rates. Thus, the concentration and availability of this anion could limit in situ sulfate-reducing activity. Three sulfate sources were identified, including iron sulfide oxidation, barite dissolution, and advective flux of sulfate. The relative importance of these sources varied with depth in the alluvium. The relatively high concentration of dissolved sulfate at the water table is attributed to the microbial oxidation of iron sulfides in response to fluctuations of the water table. At intermediate depths, barite dissolves in undersaturated pore water containing relatively high concentrations of dissolved barium (∼100 μM) and low concentrations of sulfate. Dissolution is consistent with the surface texture of detrital barite grains in contact with leachate. Laboratory incubations of unamended and barite-amended aquifer slurries supported the field observation of increasing concentrations of barium in solution when sulfate reached low levels. At a deeper highly permeable interval just above the confining bottom layer of the aquifer, sulfate reduction rates were markedly higher than rates at intermediate depths. Sulfate is supplied to this deeper zone by advection of uncontaminated groundwater beneath the landfill. The measured rates of sulfate reduction in the aquifer also correlated with the abundance of accumulated iron sulfide in this zone. This suggests that the current and past distributions of sulfate-reducing activity are similar and that the supply of sulfate has been sustained at these sites.

Environmental Science & Technology↗

USGS2005

Volatile organic compound matrix spike recoveries for ground- and surface-water samples, 1997-2001

The U.S. Geological Survey's National Water-Quality Assessment (NAWQA) Program used field matrix spikes (FMSs), field matrix spike replicates (FMSRs), laboratory matrix spikes (LMSs), and laboratory reagent spikes (LRSs), in part, to assess the quality of volatile organic compound (VOC) data from water samples collected and analyzed in more than 50 of the Nation's largest river basins and aquifers (Study Units). The data-quality objectives of the NAWQA Program include estimating the extent to which variability, degradation, and matrix effects, if any, may affect the interpretation of chemical analyses of ground- and surface-water samples. In order to help meet these objectives, a known mass of VOCs was added (spiked) to water samples collected in 25 Study Units. Data within this report include recoveries from 276 ground- and surface-water samples spiked with a 25-microliter syringe with a spike solution containing 85 VOCs to achieve a concentration of 0.5 microgram per liter. Combined recoveries for 85 VOCs from spiked ground- and surface-water samples and reagent water were used to broadly characterize the overall recovery of VOCs. Median recoveries for 149 FMSs, 107 FMSRs, 20 LMSs, and 152 LRSs were 79.9, 83.3, 113.1, and 103.5 percent, respectively. Spike recoveries for 85 VOCs also were calculated individually. With the exception of a few VOCs, the median percent recoveries determined from each spike type for individual VOCs followed the same pattern as for all VOC recoveries combined, that is, listed from least to greatest recovery-FMSs, FMSRs, LRSs, and LMSs. The median recoveries for individual VOCs ranged from 63.7 percent to 101.5 percent in FMSs; 63.1 percent to 101.4 percent in FMSRs; 101.7 percent to 135.0 percent in LMSs; and 91.0 percent to 118.7 percent in LRSs. Additionally, individual VOC recoveries were compared among paired spike types, and these recoveries were used to evaluate potential bias in the method. Variability associated with field spiking, field handling, transport, and analysis was assessed by comparing recoveries between 107 pairs of FMR and FMSR samples. For most VOCs, FMSR recoveries were greater than the paired FMS recoveries. This may result from routinely processing the FMS sample first, allowing a more fluid and efficient technique when processing the FMSR. Degradation was examined by comparing VOC recoveries between 20 pairs of FMS and LMS samples. For all VOCs, the LMS recoveries were greater than FMS recoveries. However, data presented in a previously published VOC stability study were interpreted, and recoveries indicated that VOC degradation should not affect the recovery for most VOCs monitored by the NAWQA Program. Matrix effects were examined by comparing VOC recoveries from 20 pairs of LMS and LRS samples. With the exception of two VOCs, individual recoveries were not significantly different between LMSs and LRSs, indicating that most VOC recoveries are not affected by matrix effects. Additionally, matrix effects should be negligible due to the analytical technique (purge and trap capillary column gas chromatography/mass spectrometry) used for VOC analysis at the U.S. Geological Survey National Water Quality Laboratory (NWQL). The reason for the lower VOC recoveries from FMSs and FMSRs than from LMSs and LRSs may be associated with differences in spiking technique and experience, and to varying environmental conditions at the time of spiking. However, for all spike types, 87 percent of the individual VOC recoveries were within the range of 60 to 140 percent, a range that is considered acceptable by the U.S. Environmental Protection Agency's established analytical method. Additionally, the median recovery for each spike type was within the range of 60 to 140 percent. The excellent VOC recoveries from LMSs and LRSs demonstrate that low VOC concentrations can routinely and accurately be measured by the analytical methods used by the NWQL.

Scientific Investigations Report↗

USGS2020

Storage capacity and sedimentation characteristics of the San Antonio Reservoir, California, 2018

The San Antonio Reservoir is a large water storage facility in Alameda County, California, and is a major component of the Hetch Hetchy Regional Water System (RWS). The RWS is a water-supply system owned and operated by the San Francisco Public Utilities Commission (SFPUC) and provides water for about 2.7 million people in the San Francisco, Santa Clara, Alameda, and San Mateo Counties. The San Antonio Reservoir is one of two RWS reservoirs in Alameda County and the third largest of the RWS reservoirs in the San Francisco Bay Area. The reservoir was formed by the James H. Turner Dam, which was completed in 1965. At the time of construction, the reservoir was estimated to have 50,500 acre-feet (acre-ft) of storage capacity. That early estimate was based on a 1963 pre-construction topographic map, which was drawn from aerial photographs. The capacity of the reservoir was later surveyed in 1994 and 2000. These two later surveys did not include the upper 18 feet (ft) of the reservoir, which represents roughly 30 percent of the overall storage volume. To determine the storage capacity and provide updated stage-capacity curves up to the spillway, the U.S. Geological Survey, in cooperation with the SFPUC, surveyed the bathymetry and shoreline of the reservoir in April 2018. The bathymetric survey was performed by making depth soundings using a boat-mounted, multibeam echosounder. At the time of the survey, the water level was between 13 and 14 ft below the spillway elevation. To measure capacity between the water line up to the spillway elevation, topography along most of the shoreline was surveyed from the boat using a terrestrial Light Detection and Ranging (LiDAR) scanner and in other areas by using ground-survey techniques. Location during bathymetric and topographic data collection was determined using a Global Navigation Satellite System-Real Time Network system. Vertical profiles of sound speed were collected periodically. The sound-speed profiles were used to spatially and temporally adjust the sound-speed calculations used to determine depth from the soundings. Approximately 125 kilometers (78 miles) of transects with a total of about 560 million depth soundings and topographic LiDAR points were collected (about 160 per square meter). In addition, approximately 500 topographic survey points were collected in shallow, wadable areas and on land near the upper reservoir area using a Global Navigation Satellite System receiver attached to a fixed length survey rod. Depth soundings, terrestrial LiDAR points, topographic survey points, and a digitized shoreline were merged and interpolated to generate a digital elevation model (DEM) of the reservoir. Gridded elevation data extracted from the DEM were then tabulated to determine total reservoir capacity and create reservoir stage-surface area and stage-storage capacity tables. Results of the reservoir capacity analysis indicated that the reservoir has 53,266 (plus or minus 140) acre-ft of storage capacity, which is an increase of 2,766 acre-ft (or 5.5 percent) greater than the original 1965 estimate; the increase is likely due to improved survey methods. Also, at the time of this 2018 survey, Intake #1 (the lowest intake) was not in operation. Intake #1 is estimated to be buried approximately 10 ft below the bed, whereas Intake #2 is about 20 ft above the bed. There are five intakes at different elevation levels; however, when consecutive lower intakes become inoperable due to sedimentation, the live storage capacity (capacity available for use) is reduced. At the time of this survey, the remaining live storage (above Intake #2) was approximately 52,363 acre-ft. The 2018 stage-capacity curve was compared to the original 1965 stage-capacity curve. Although overall, the changes indicate an increase in storage capacity, the change in volume at 372.7 ft North American Vertical Datum of 1988 (370 ft National Geodetic Vertical Datum of 1929, NGVD 29) shows a decrease of 733 acre-ft (the elevation of 370 ft NGVD 29 was used because it is the lowest elevation available for the 1965 stage-capacity curves). This finding agrees with the observed accumulation of sediment over Intake #1. That volume was converted to an annual sediment yield of 0.35 acre-ft per square mile (or 165 cubic meters per square kilometer), which is of the same order of magnitude as that found in other watersheds for the Coast Ranges in California. A decrease of 733 acre-ft between 1965 and 2018 thus represents a loss of 1.5 percent of the overall storage capacity in the reservoir. The updated stage-surface area and stage-capacity tables provided in this report and online ( https://doi.org/10.5066/P9KC9DU8 ) can be used by the SFPUC to improve reservoir operations and serve as an accurate baseline to monitor bathymetric changes in the future.

California↗

USGS2025

From water to web: Trophic transfer of neonicotinoids from a wastewater effluent-dominated stream to riparian spiders

Municipal wastewater is a known point source of organic contaminants, including pharmaceuticals and neonicotinoid insecticides. Emergent aquatic insects can provide a direct aquatic-to-terrestrial contaminant transfer route to the food web, with implications for terrestrial food web dispersal of wastewater-derived organic contaminants. We quantified 17 target pharmaceuticals and insecticides (log K ow : −1.43 to 4.75) in surface water, fish, aquatic insects, and web-building riparian spiders at a wastewater effluent-dominated stream in eastern Iowa, USA. Two neonicotinoids, imidacloprid and clothianidin, had spider tissue concentrations of 8.9–84 ng/g and 1.2–11 ng/g, respectively. The imidacloprid/clothianidin ratios in spider tissues were reflective of the concentration ratios in the effluent-dominated streamwater and opposite of nearby agriculturally dominated waters. In contrast, no pharmaceuticals were detectable in the riparian spiders; however, only pharmaceuticals were present in both fish and aquatic insects (1.1–11 ng/g and 5.9–51 ng/g, respectively). Neonicotinoids are not predicted to enter aquatic food webs based on their log K ow and bioconcentration factor values; therefore, an implication of this study is to warrant caution when using traditional bioaccumulation models for polar hydrophilic contaminants. This work provides further evidence that neonicotinoids undergo trophic transfer and represents the initial measurements, implicating such a transfer from effluent-dominated streams into terrestrial food webs. While this study emphasizes field-relevant observations, it is limited by environmental variability, including uncertainties in the biomass of emergent insects that likely contribute to spider diets. Future research could investigate contaminant metabolites within individual organisms or use complementary techniques to better understand the underlying mechanisms.

Iowa↗

USGS2022

The applicability of time-integrated unit stream power for estimating bridge pier scour using noncontact methods in a gravel-bed river

In near-field remote sensing, noncontact methods (radars) that measure stage and surface water velocity have the potential to supplement traditional bridge scour monitoring tools because they are safer to access and are less likely to be damaged compared with in-stream sensors. The objective of this study was to evaluate the use of radars for monitoring the hydraulic conditions that contribute to bridge–pier scour in gravel-bed channels. Measurements collected with a radar were also leveraged along with minimal field measurements to evaluate whether time-integrated stream power per unit area (Ω) was correlated with observed scour depth at a scour-critical bridge in Colorado. The results of this study showed that (1) there was close agreement between radar-based and U.S. Geological Survey streamgage-based measurements of stage and discharge, indicating that radars may be viable tools for monitoring flow conditions that lead to bridge pier scour; (2) Ω and pier scour depth were correlated, indicating that radar-derived Ω measurements may be used to estimate scour depth in real time and predict scour depth based on the measured trajectory of Ω. The approach presented in this study is intended to supplement, rather than replace, existing high-fidelity scour monitoring techniques and provide data quickly in information-poor areas.

Colorado↗

USGS2019

A revised continuous surface elevation model for modeling

A digital elevation model (DEM) is an essential component of any hydrodynamic model. The Delta Modeling Section (Section) has maintained a database of bathymetry soundings and levee surveys for decades and published a 10-meter (10m) DEM for the San Francisco Bay and Sacramento-San Joaquin Delta (Delta) (California Department of Water Resources 2012). In collaboration with the U.S. Geological Survey (USGS) Pacific Coastal and Marine Science Center, the California Department of Water Resources (DWR) has continued to upgrade these DEMs based on newer survey data and improved interpolation methodologies. An updated San Francisco Bay-Delta bathymetric/topographic digital elevation model was published by the USGS (Fregoso, Wang, Ateljevich, and Jaffe 2017). Both DWR and USGS continue to work on the elevation models for several reasons. First, high-resolution multibeam bathymetry data continues to become available. A good portion of the newer collections are performed at locations where bathymetry data is lacking, or of poor quality, or where model sensitivity to bathymetry is known to be high, so the effort has a high return on investment. Recent high-resolution multibeam datasets easily support the development of accurate 2-meter (2m) DEMs, although shallow water, turbidity, vegetation, and the gap between the multibeam data and terrestrial data from light detection and ranging (LiDAR) remain vexing issues that fuel development of enhanced techniques. In some locations, migration toward 2m resolution models is motivated by geographical structure even where there has been little improvement in the underlying data. DEMs at 10m resolution are insufficient to adequately describe small-scale terrain features, such as levee crests or the main conveyance channel through a narrow reach, such as Middle River. As a result, elevation modelers have traditionally needed to perform feature enforcement for 10m DEMs, but not for the Section’s 2m DEMs which do resolve these features (California Department of Resources 2012). There are several other problems associated with a coarse target resolution, including reduced conveyance and rough contours where channels run oblique to the elevation model. In places where the topography demands a finer elevation model, the Section and others have adopted improved interpolation techniques for single-beam data to produce reasonable 2m DEMs that preserve features on appropriate scales.

California↗

USGS1978

Application of digital profile modeling techniques to ground-water solute transport at Barstow, California

This study investigated the use of a two-dimensional profile-oriented water-quality model for the simulation of head and water-quality changes through the saturated thickness of an aquifer. The profile model is able to simulate confined or unconfined aquifers with nonhomogeneous anisotropic hydraulic conductivity, nonhomogeneous specific storage and porosity, and nonuniform saturated thickness. An aquifer may be simulated under either steady or nonsteady flow conditions provided that the ground-water flow path along which the longitudinal axis of the model is oriented does not move in the aquifer during the simulation time period. The profile model parameters are more difficult to quantify than are the corresponding parameters for an areal-oriented water-fluality model. However, the sensitivity of the profile model to the parameters may be such that the normal error of parameter estimation will not preclude obtaining acceptable model results. Although the profile model has the advantage of being able to simulate vertical flow and water-quality changes in a single- or multiple-aquifer system, the types of problems to which it can be applied is limited by the requirements that (1) the ground-water flow path remain oriented along the longitudinal axis of the model and (2) any subsequent hydrologic factors to be evaluated using the model must be located along the land-surface trace of the model. Simulation of hypothetical ground-water management practices indicates that the profile model is applicable to problem-oriented studies and can provide quantitative results applicable to a variety of management practices. In particular, simulations of the movement and dissolved-solids concentration of a zone of degraded ground-water quality near Barstow, Calif., indicate that halting subsurface disposal of treated sewage effluent in conjunction with pumping a line of fully penetrating wells would be an effective means of controlling the movement of degraded ground water.

Water Supply Paper↗

USGS2006

Guidelines and standard procedures for continuous water-quality monitors: Station operation, record computation, and data reporting

The U.S. Geological Survey uses continuous water-quality monitors to assess the quality of the Nation's surface water. A common monitoring-system configuration for water-quality data collection is the four-parameter monitoring system, which collects temperature, specific conductance, dissolved oxygen, and pH data. Such systems also can be configured to measure other properties, such as turbidity or fluorescence. Data from sensors can be used in conjunction with chemical analyses of samples to estimate chemical loads. The sensors that are used to measure water-quality field parameters require careful field observation, cleaning, and calibration procedures, as well as thorough procedures for the computation and publication of final records. This report provides guidelines for site- and monitor-selection considerations; sensor inspection and calibration methods; field procedures; data evaluation, correction, and computation; and record-review and data-reporting processes, which supersede the guidelines presented previously in U.S. Geological Survey Water-Resources Investigations Report WRIR 00-4252. These procedures have evolved over the past three decades, and the process continues to evolve with newer technologies.

Techniques and Methods↗

USGS2012

Slope-Area Computation Program Graphical User Interface 1.0—A Preprocessing and Postprocessing Tool for Estimating Peak Flood Discharge Using the Slope-Area Method

The slope-area method is a technique for estimating the peak discharge of a flood after the water has receded (Dalrymple and Benson, 1967). This type of discharge estimate is called an “indirect measurement” because it relies on evidence left behind by the flood, such as high-water marks (HWMs) on trees or buildings. These indicators of flood stage are combined with measurements of the cross-sectional geometry of the stream, estimates of channel roughness, and a mathematical model that balances the total energy of the flow between cross sections. This is in contrast to a “direct” measurement of discharge during the flood where cross-sectional area is measured and a current meter or acoustic equipment is used to measure the water velocity. When a direct discharge measurement cannot be made at a gage during high flows because of logistics or safety reasons, an indirect measurement of a peak discharge is useful for defining the high-flow section of the stage-discharge relation (rating curve) at the stream gage, resulting in more accurate computation of high flows. The Slope-Area Computation program (SAC; Fulford, 1994) is an implementation of the slope-area method that computes a peak-discharge estimate from inputs of water-surface slope (from surveyed HWMs), channel geometry, and estimated channel roughness. SAC is a command line program written in Fortran that reads input data from a formatted text file and prints results to another formatted text file. Preparing the input file can be time-consuming and prone to errors. This document describes the SAC graphical user interface (GUI), a crossplatform “wrapper” application that prepares the SAC input file, executes the program, and helps the user interpret the output. The SAC GUI is an update and enhancement of the slope-area method (SAM; Hortness, 2004; Berenbrock, 1996), an earlier spreadsheet tool used to aid field personnel in the completion of a slope-area measurement. The SAC GUI reads survey data, develops a plan-view plot, water-surface profile, cross-section plots, and develops the SAC input file. The SAC GUI also develops HEC-2 files that can be imported into HEC–RAS.

Fact Sheet↗

USGS2010

Integrated use of surface geophysical methods for site characterization — A case study in North Kingstown, Rhode Island

A suite of complementary, non‐invasive surface geophysical methods was used to assess their utility for site characterization in a pilot investigation at a former defense site in North Kingstown, Rhode Island. The methods included frequency‐domain electromagnetics (FDEM), ground‐penetrating radar (GPR), electrical resistivity tomography (ERT), and multi‐channel analysis of surface‐wave (MASW) seismic. The results of each method were compared to each other and to drive‐point data from the site. FDEM was used as a reconnaissance method to assess buried utilities and anthropogenic structures; to identify near‐surface changes in water chemistry related to conductive leachate from road‐salt storage; and to investigate a resistive signature possibly caused by groundwater discharge. Shallow anomalies observed in the GPR and ERT data were caused by near‐surface infrastructure and were consistent with anomalies observed in the FDEM data. Several parabolic reflectors were observed in the upper part of the GPR profiles, and a fairly continuous reflector that was interpreted as bedrock could be traced across the lower part of the profiles. MASW seismic data showed a sharp break in shear wave velocity at depth, which was interpreted as the overburden/bedrock interface. The MASW profile indicates the presence of a trough in the bedrock surface in the same location where the ERT data indicate lateral variations in resistivity. Depths to bedrock interpreted from the ERT, MASW, and GPR profiles were similar and consistent with the depths of refusal identified in the direct‐push wells. The interpretations of data collected using the individual methods yielded non‐unique solutions with considerable uncertainty. Integrated interpretation of the electrical, electromagnetic, and seismic geophysical profiles produced a more consistent and unique estimation of depth to bedrock that is consistent with ground‐truth data at the site. This test case shows that using complementary techniques that measure different properties can be more effective for site characterization than a single‐method investigation.

Rhode Island↗

USGS2024

Prefabricated Zero Ascend Omnispecies (ZAO) modular fish passage modules using advanced manufacturing techniques

The Zero Ascend Omnispecies (ZAO) fish passage attraction module “ZAO Attractor” is a novel system designed to facilitate upstream passage for a broad spectrum of fish species, with a particular focus on American shad and river herring (alewife and/or blueback herring). Combining the use of prefabricated, modular components with advanced manufacturing, the ZAO aims to provide a cost-effective and scalable solution for fish passage attractions across various hydropower sites. The system features a surface level entry, so fish do not need to climb. In addition, it is designed to be adjusted and repositioned to create the most effective attraction flows by managing the outflows from hydropower turbines. Budget Period 1 (BP1) focused on the design and modeling of the ZAO Attractor and demonstrated the engineering feasibility of a modular, prefabricated, hydrodynamically efficient structure with surface level entry and passage. During BP1, the hypothesis was that certain structural adaptations, such as the addition of long fins, could direct turbine outflows to create a desirable downstream flow. Simulations, however, were inconclusive, revealing the complex nature of fish preferences for hydraulic conditions. It was discovered that there were limited published studies on the direct correlation between quantified flow patterns and fish attraction, emphasizing the need for controlled studies to observe and measure these effects. In Budget Period 2 (BP2), controlled studies with live fish were prioritized to address these complexities. A partially scaled ZAO Attractor was evaluated in laboratory conditions using native river water to assess its capability to attract and guide fish. Despite challenges with flume flow conditions and the impact of flume dimensions on flow directionality and velocity, the studies provided insights into fish behavior and preferences, particularly the requirement for a consistent flow stream for migration cues. Adjustments to the fin structure demonstrated potential effectiveness in guiding fish toward the module. However, the hydraulic conditions within the flume environment did not accurately reflect typical in-river scenarios, therefore the results were inconclusive with respect to the optimal system configuration for in-river use. In the future, conducting comprehensive field studies can enhance understanding of the interactions between fish behavior and flow conditions created by the ZAO Attractor. Additionally, a design review is advised, particularly regarding the load scenarios throughout the seasons and positioning of the ZAO Attractor. These studies should continue to refine the design to achieve its intended benefits: economical and effective fish attraction and passage that can be adapted to specific site conditions while allowing for continued energy generation at sites up for re-licensure and adding hydropower generation to previously untapped resources in non-powered dams and new stream reaches. In conclusion, the ZAO fish passage attraction module presents a promising approach to fish passage at hydropower stations, with the potential to balance environmental concerns with renewable energy development. However, further field validation and optimization are necessary to ensure its effectiveness and practicality in real-world applications.

Final Technical Report↗