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At least 757 records · Page 42Linked to original sources

An epidemiological model of virus transmission in salmonid fishes of the Columbia River Basin

We have developed a dynamic epidemiological model informed by records of viral presence and genotypes to evaluate potential transmission routes maintaining a viral pathogen in economically and culturally important anadromous fish populations. In the Columbia River Basin, infectious hematopoietic necrosis virus (IHNV) causes severe disease, predominantly in juvenile steelhead trout ( Oncorhynchus mykiss ) and less frequently in Chinook salmon ( O. tshawytscha ). Mortality events following IHNV infection can be devastating for individual hatchery programs. Despite reports of high local mortality and extensive surveillance efforts, there are questions about how viral transmission is maintained. Modeling this system offers important insights into disease transmission in natural aquatic systems, as well as about the data requirements for generating accurate estimates about transmission routes and infection probabilities. We simulated six scenarios in which testing rates and the relative importance of different transmission routes varied. The simulations demonstrated that the model accurately identified routes of transmission and inferred infection probabilities accurately when there was testing of all cohort-sites. When testing records were incomplete, the model accurately inferred which transmission routes exposed particular cohort-sites but generated biased infection probabilities given exposure. After validating the model and generating guidelines for result interpretation, we applied the model to data from 14 annual cohorts (2000–2013) at 24 focal sites in a sub-region of the Columbia River Basin, the lower Columbia River (LCR), to quantify the relative importance of potential transmission routes in this focal sub-region. We demonstrate that exposure to IHNV via the return migration of adult fish is an important route for maintaining IHNV in the LCR sub-region, and the probability of infection following this exposure was relatively high at 0.16. Although only 1% of cohort-sites experienced self-exposure by infected juvenile fish, this transmission route had the greatest probability of infection (0.22). Increased testing and/or determining whether transmission can occur from cohort-sites without testing records (e.g., determining there was no testing record because there were no fish at the cohort-site) are expected to improve inference about infection probabilities. Increased use of secure water supplies and continued use of biosecurity protocols may reduce IHNV transmission from adult fish and juvenile fish within the site, respectively, to juvenile salmonids at hatcheries. Models and conclusions from this study are potentially relevant to understanding the relative importance of transmission routes for other important aquatic pathogens in salmonids, including the agents of bacterial kidney disease and coldwater disease, and the basic approach may be useful for other pathogens and hosts in other geographic regions.

Ecological Modelling↗

Level II scour analysis for Bridge 42 (HARDELMSTR0042) on Elm Street, crossing Cooper Brook, Hardwick, Vermont

This report provides the results of a detailed Level II analysis of scour potential at structure HARDELMSTR0042 on Elm Street crossing Cooper Brook, Hardwick, Vermont (figures 1–8). A Level II study is a basic engineering analysis of the site, including a quantitative analysis of stream stability and scour (U.S. Department of Transportation, 1993). Results of a Level I scour investigation also are included in Appendix E of this report. A Level I investigation provides a qualitative geomorphic characterization of the study site. Information on the bridge, gleaned from Vermont Agency of Transportation (VTAOT) files, was compiled prior to conducting Level I and Level II analyses and is found in Appendix D. The site is in the New England Upland section of the New England physiographic province in north-central Vermont. The 16.6-mi2 drainage area is in a predominantly rural and forested basin. In the vicinity of the study site, the overbanks are primarily grass covered with some brush along the immediate channel banks except the upstream right bank and overbank which is forested and the downstream left overbank which has a lumberyard. In the study area, Cooper Brook has a sinuous channel with a slope of approximately 0.005 ft/ft, an average channel top width of 50 ft and an average channel depth of 6 ft. The predominant channel bed materials are sand and gravel with a median grain size (D50) of 1.25 mm (0.00409 ft). The geomorphic assessment at the time of the Level I and Level II site visit on July 24, 1995, indicated that the reach was stable. The Elm Street crossing of Cooper Brook is a 39-ft-long, two-lane bridge consisting of one 37-foot concrete span (Vermont Agency of Transportation, written communication, March 17, 1995). The bridge is supported by vertical, concrete abutments with wingwalls. The channel is skewed approximately 40 degrees to the opening while the opening-skew-to-roadway is 45 degrees. On August 17, 1995 the site was revisited to investigate the effect of the August 4-5, 1995 flood on the structure. Channel features such as scour holes and point bars were shifted by the high flow event. Details of these changes can be found in the Level I data form in Appendix E. Additional details describing conditions at the site are included in the Level II Summary and Appendices D and G. Scour depths and rock rip-rap sizes were computed using the general guidelines described in Hydraulic Engineering Circular 18 (Richardson and others, 1993). Total scour at a highway crossing is comprised of three components: 1) long-term streambed degradation; 2) contraction scour (due to accelerated flow caused by a reduction in flow area at a bridge) and; 3) local scour (caused by accelerated flow around piers and abutments). Total scour is the sum of the three components. Equations are available to compute depths for contraction and local scour and a summary of the results of these computations follows. Contraction scour for all modelled flows ranged from 0.0 to 3.4 ft. The worst-case contraction scour occurred at the incipient-overtopping discharge which was less than the 100-year discharge. Abutment scour ranged from 7.1 to 10.4 ft. The worst-case abutment scour occurred at the 500-year discharge. Additional information on scour depths and depths to armoring are included in the section titled “Scour Results”. Scoured-streambed elevations, based on the calculated scour depths, are presented in tables 1 and 2. A cross-section of the scour computed at the bridge is presented in figure 8. Scour depths were calculated assuming an infinite depth of erosive material and a homogeneous particle-size distribution. It is generally accepted that the Froehlich equation (abutment scour) gives “excessively conservative estimates of scour depths” (Richardson and others, 1993, p. 48). Usually, computed scour depths are evaluated in combination with other information including (but not limited to) historical performance during flood events, the geomorphic stability assessment, existing scour protection measures, and the results of the hydraulic analyses. Therefore, scour depths adopted by VTAOT may differ from the computed values documented herein.

Vermont↗

Tidal freshwater wetland herbivory in Anacostia Park

Herbivory has played a major role in dictating vegetation abundance and species composition at Kingman Marsh in Anacostia Park, Washington, D.C., since restoration of this tidal freshwater wetland was initiated in 2000. In June 2009 an herbivory study was established to document the impacts of resident Canada goose (Branta canadensis maxima) herbivory to vegetation at Kingman Marsh. Sixteen modules consisting of paired exclosed plots and unfenced control plots were constructed. Eight of the modules were installed in vegetated portions of the restoration site that had been protected over time by fencing, while the remaining eight modules were placed in portions of the site that had not been protected over time and were basically unvegetated at the start of the experiment. Since the experiment was designed to determine the impacts of herbivory by resident Canada geese as opposed to other herbivores, exclosure fencing was elevated 0.2 m to permit access by herbivores such as fish and turtles while excluding mature Canada geese. Repeated measures analysis of variance (ANOVA) was used to analyze the differences between paired exclosure and control plots for a number of variables including total vegetative cover. Differences in total vegetative cover were not significant for the baseline data collected in June. By contrast, two months after the old protective fencing was removed from the initially-vegetated areas to allow Canada geese access to the control plots, total vegetative cover had declined dramatically in the initially-vegetated control plots, and differences between paired exclosed and control plots were significant (P = 0.0026). No herbivory by Canada geese or other herbivores such as fish or turtles was observed in the exclosures. These results show that Canada goose herbivory has inflicted significant damage to the native wetland vegetation in the portions of Kingman Marsh that had been refenced and replanted. Significant differences in total vegetative cover were limited to the eight modules installed in areas already vegetated by previous restoration efforts and protected until the start of the study, suggesting that areas of Kingman that are essentially devoid of vegetation would take longer than a growing season to show signs of improvement once goose herbivory impacts have been reduced.

Natural Resource Technical Report↗

CMGTooL user's manual

During the past several years, the sediment transport group in the Coastal and Marine Geology Program (CMGP) of the U. S. Geological Survey has made major revisions to its methodology of processing, analyzing, and maintaining the variety of oceanographic time-series data. First, CMGP completed the transition of the its oceanographic time-series database to a self-documenting NetCDF (Rew et al., 1997) data format. Second, CMGP’s oceanographic data variety and complexity have been greatly expanded from traditional 2-dimensional, single-point time-series measurements (e.g., Electro-magnetic current meters, transmissometers) to more advanced 3-dimensional and profiling time-series measurements due to many new acquisitions of modern instruments such as Acoustic Doppler Current Profiler (RDI, 1996), Acoustic Doppler Velocitimeter, Pulse-Coherence Acoustic Doppler Profiler (SonTek, 2001), Acoustic Bacscatter Sensor (Aquatec, 1001001001001001001). In order to accommodate the NetCDF format of data from the new instruments, a software package of processing, analyzing, and visualizing time-series oceanographic data was developed. It is named CMGTooL. The CMGTooL package contains two basic components: a user-friendly GUI for NetCDF file analysis, processing and manipulation; and a data analyzing program library. Most of the routines in the library are stand-alone programs suitable for batch processing. CMGTooL is written in MATLAB computing language (The Mathworks, 1997), therefore users must have MATLAB installed on their computer in order to use this software package. In addition, MATLAB’s Signal Processing Toolbox is also required by some CMGTooL’s routines. Like most MATLAB programs, all CMGTooL codes are compatible with different computing platforms including PC, MAC, and UNIX machines (Note: CMGTooL has been tested on different platforms that run MATLAB 5.2 (Release 10) or lower versions. Some of the commands related to MAC may not be compatible with later releases of MATLAB). The GUI and some of the library routines call low-level NetCDF file I/O, variable and attribute functions. These NetCDF exclusive functions are supported by a MATLAB toolbox named NetCDF, created by Dr. Charles Denham . This toolbox has to be installed in order to use the CMGTooL GUI. The CMGTooL GUI calls several routines that were initially developed by others. The authors would like to acknowledge the following scientists for their ideas and codes: Dr. Rich Signell (USGS), Dr. Chris Sherwood (USGS), and Dr. Bob Beardsley (WHOI). Many special terms that carry special meanings in either MATLAB or the NetCDF Toolbox are used in this manual. Users are encouraged to read the documents of MATLAB and NetCDF for references.

Open-File Report↗

Southern (California) sea otter population status and trends at San Nicolas Island, 2017–2020

The southern sea otter ( Enhydra lutris nereis ) population at San Nicolas Island, California, has been monitored annually since the translocation of 140 sea otters to the island was completed in 1990. Monitoring efforts have varied in frequency and type across years. In 2017, the U.S. Navy and the U.S. Fish and Wildlife Service initiated a sea otter monitoring and research plan to determine the effects of military readiness activities on the growth or decline of the southern sea otter population at San Nicolas Island. The monitoring program, at its basic level, includes quarterly seasonal surveys of population abundance, distribution, and foraging activity. From 2017 to 2020, we measured a 22-percent per annum increase in population abundance (95-percent confidence interval =11–34 percent) with 114 total individuals as of February 2020. Coinciding with recent population growth, the sea otter distribution, which previously tended to concentrate on the west side, appears to have shifted toward an expansion of use in the north and especially greater seasonal use in the north and south during winter and spring. Foraging data were collected on a total of 2,675 foraging dives in 167 foraging bouts, and the majority of identified prey on successful dives (n=1,335) were sea urchins (940) followed by snails (240) and crabs (78). Small numbers of lobsters (26), octopus (16), and abalone (5) also were identified. Estimates of energy intake rates averaged 17.3 kilocalories per minute (95-percent confidence interval =15.6–19.0 kilocalories per minute) and suggest possible variations across years and seasons, but confidence intervals based on specific years of data were relatively wide. In addition to abundance, trends, distribution, and forage energy intake across seasons and years, these replicated surveys provide information on the precision of data achieved by quarterly survey effort. We used precision estimates and conducted simulation analyses to assess the power of detecting 10-percent or greater decreases in population growth rates and how this power is likely to change with years of observation, survey effort, and the size of decrease. These results can be useful to the planning of future monitoring and research of sea otters at San Nicolas Island.

California↗

Groundwater data collection for the Quinault Indian Nation, Grays Harbor and Jefferson Counties, Washington

Groundwater data were collected on the Quinault Indian Reservation to provide the Quinualt Indian Nation (QIN) with basic knowledge of the existing wells and springs on the reservation, and to establish a water-level network to be monitored by QIN to begin building a long-term groundwater dataset. The 327 mi 2 Quinault Indian Reservation is located within the heavily forested Queets-Quinault watershed along the west-central coast of Washington and includes the coastal communities of Taholah and Queets, and the inland community of Amanda Park. Groundwater data were collected or compiled for 87 sites—82 wells and 5 springs. In October 2016, a field inventory was done to locate the sites and acquire site data. Groundwater levels were measured in 15 of the field-inventoried wells and 3 of those wells were observed as flowing (artesian). A monthly groundwater‑level monitoring network of 13 wells was established by the U.S. Geological Survey in March 2017, and the network was transferred to QIN in June 2017 for continued measurements. Several data needs were identified that would provide a more complete understanding of the groundwater system of the Quinault Indian Reservation. The collection of monthly water-level data for multiple years is an important first step in understanding seasonal and long term changes in water levels. Additionally, the collection of baseline groundwater chemistry and quality data across the reservation would help with future efforts to monitor existing and potentially changing groundwater quality conditions. Development of a water budget of the Queets-Quinault Watershed and the reservation within that area would provide water users with a better understanding of this important resource and provide needed information about the competing demands on local water sources.

Washington↗

Hydrogeologic mapping and three-dimensional geologic modeling of glacial deposits in a multicounty area of southeastern Michigan, northeastern Indiana, and northwestern Ohio

The glacial deposits underlying southeastern Michigan, northeastern Indiana, and northwestern Ohio are a substantial source of water to communities, agriculture, and industry in the region. Previous efforts to characterize aquifer materials in the area cited a need for additional information about the underlying hydrogeologic characteristics and related groundwater availability as well as improved mapping of the extent and properties of the glacial deposits. Recent U.S. Geological Survey multi-State compilations of water-well drilling records have greatly increased access to high-resolution geologic data, particularly in glacial depositional environments. This study by the U.S. Geological Survey, in cooperation with the Ohio Environmental Protection Agency, uses processed data from the State-managed collections of well records to characterize the glacial deposits in the study area using two methods. The first method creates two-dimensional maps of basic hydrogeologic information commonly required for assessments of groundwater availability, including (1) total thickness of glacial deposits, (2) total thickness of coarse-grained deposits, (3) specific-capacity-based transmissivity and hydraulic conductivity, and (4) texture-based estimated equivalent horizontal and vertical hydraulic conductivity and transmissivity. The second method builds a hydrogeologic framework of the complex glacial aquifer through construction of a volumetric geologic model by using three-dimensional kriging. Results of the volumetric model indicate that aquifer materials are primarily concentrated in the western parts of the study area near the Indiana-Ohio border. Coarse-grained sediments are also present as surficial deposits in the north of the study area where intermixing glacial advances created complex distributions of unconsolidated deposits. Two-dimensional maps of hydrogeologic properties support the volumetric model, showing thicknesses of coarse-grained deposits that reach up to 250 feet in the western sections of the study area and progressively thin to near absence in the east. Visualization of the aquifer materials with a volumetric model generally shows a highly discontinuous distribution of coarse- and fine-grained materials, with no clearly defined boundaries to delineate the extent of the aquifer. Comparisons of cross sections derived from the volumetric model with existing published maps support previous near-surface hydrogeologic interpretations while filling gaps where data are sparse, particularly in deeper parts of the aquifer. Both the two-dimensional maps and the volumetric model provide data that can directly inform assessments of groundwater availability, in addition to having future applications to studies of groundwater flow and transport.

Indiana, Michigan, Ohio↗

National strategy for landslide loss reduction

Executive Summary Landslide hazards are present in all 50 States and most U.S. territories, and they affect lives, property, infrastructure, and the environment. Landslides are the downslope move­ment of earth materials under the force of gravity. They can occur without any obvious trigger. Widespread or severe land­slide events are often driven by such hazards as hurricanes, earthquakes, volcanic eruptions, heavy rain events, flooding, and wildfires. Landslides can also cause their own cascading consequences, such as the spread of hazardous materials or the creation of devastating local tsunamis. This strategy document describes goals and strategic actions of a comprehensive strategy to meet key challenges to reducing the Nation’s risk from landslide hazards equitably and effectively. The document follows the direction of the National Landslide Preparedness Act (Public Law 116–323) by presenting a strategy for addressing landslide hazards, including risk reduction and response. The act directs the Department of the Interior to establish a program that will work with State, Tribal, and local governments as well as with academia, the private sector, community-based groups, and nonprofit organizations to identify landslide hazards and risk and improve communication, coordination, and emergency preparedness, with the objective of reducing landslide losses. As the only Federal program dedicated to landslide hazard science, the U.S. Geological Survey’s Landslide Hazards Program will lead and coordinate many of the efforts described in this strategy document. Landslide hazard risk reduction must be undertaken collectively and collaboratively across the Federal Government. This strategy document will provide a framework for the creation of an interagency management plan that describes the programs, projects, workforce, and budgets required to carry out the national strategy. The strategy outlined in this document presents a vision of how to equitably produce, communicate, and apply landslide data and science to support a broad range of land management, infrastructure, planning, and emergency response decisions. These decisions are made by a variety of actors, including private and nonprofit landholders; State, Tribal, territorial, city, and county planners; emergency managers; engineers; infrastructure managers; Federal agencies and their partners; and community leaders and individuals. Supporting those decisions and reducing the Nation’s vulnerability to landslides requires overcoming three main challenges: (1) gaps in basic information needed to describe and understand landslide occurrence and societal risk, (2) difficulty in accurately mapping and forecasting landslide hazards, and (3) communication and coordination among the many jurisdictions and sectors that have responsi­bility for and interest in reducing landslide losses. To address those challenges, this strategy document puts forward a series of strategic actions to achieve four goals: Assess: Decision makers have access to detailed, nationwide, and contextually relevant information on land­slide hazard and risk. Coordinate: Landslide hazard mitigation, preparedness, response, and recovery efforts are coordinated across Federal, State, Tribal, territorial, and local levels. Plan: Communities and land managers are prepared and able to plan for landslide hazards. Respond: Landslide surveillance, warnings, and responses to events are effective, efficient, equitable, coopera­tive, and data-driven to protect lives, property, infrastructure, and the environment. These strategic actions focus on expanding the knowl­edge of societal risk posed by landslides as well as better understanding of where, when, and why they occur. They focus on applying that knowledge to support landslide risk reduction efforts and decisions, including the establishment of new advisory, coordination, and working groups focused on landslide hazard and risk. They take into account that supporting landslide loss reduction decisions also requires new guidance, tools, and training codeveloped with the entities, organizations, and individuals faced with making those decisions. Finally, they address actions needed to support and expand landslide warning information and improve the technical response to landslide emergencies.

Open-File Report↗

Flood-inundation maps and updated components for a flood-warning system or the City of Marietta, Ohio and selected communities along the Lower Muskingum River and Ohio River

Digital flood-inundation maps for lower reaches of the Muskingum River and a reach of the Ohio River in southeast Ohio were created by the U.S. Geological Survey (USGS), in cooperation with the Muskingum Watershed Conservancy District and the City of Marietta, Ohio. To complete the inundation maps, Ohio River and lower Muskingum River bathymetry was updated and two streamgages, one on the Ohio River upstream of Marietta near Sardis, Ohio, and one on the Muskingum River in Beverly, Ohio, were added as basic components of the flood-warning system. An updated hydraulic model component also led to the new flood-inundation maps. The maps, which can be accessed through the USGS Flood Inundation Mapping Science Web site at http://water.usgs.gov/osw/flood_inundation/ depict estimates of the areal extent of flooding corresponding to water levels (stages) at one or more of the following USGS streamgages: Muskingum River at McConnelsville, Ohio (03150000); Muskingum River at Beverly, Ohio (03150500); and Ohio River at Marietta, Ohio (03150700). The maps can be used in conjunction with National Weather Service flood-forecast data to show areas of estimated flood inundation associated with forecasted flood-peak stages. Flood profiles for selected reaches were prepared by calibrating steady-state step-backwater models to selected streamgage rating curves. The step-backwater models were used to determine water-surface-elevation profiles for up to 12 flood stages at a streamgage with corresponding stream-flows ranging from approximately the 10- to 0.2-percent chance annual-exceedance probabilities for each of the 3 streamgages that correspond to the flood-inundation maps. Additional hydraulic modeling was used to account for the effects of backwater from the Ohio River on water levels in the Muskingum River. The computed longitudinal profiles of flood levels were used with a Geographic Information System digital elevation model (derived from light detection and ranging) to delineate flood-inundation areas. Digital maps showing flood-inundation areas overlain on digital orthophotographs were prepared for the selected floods.

Ohio↗

The Restoration Rapid Assessment Tool: An Access/Visual Basic application

Managers of parks and natural areas are increasingly faced with difficult decisions concerning restoration of disturbed lands. Financial and workforce resources often limit these restoration efforts, and rarely can a manager afford to address all concerns within the region of interest. With limited resources, managers and scientists have to decide which areas will be targeted for restoration and the restoration treatments to use in these areas. A broad range of approaches are used to make such decisions, from well-researched expert opinions (Cipollini et al. 2005) to gut feeling, with variable degrees of input from site visits, data collection, and data analysis used to support the decision. A standardized approach including an analytical assessment of site characteristics based on the best information available, with a written or electronic record of all the steps taken along the way, would make comparisons among a group of sites easier and lend credibility through use of common, documented criteria at all sites. In response to these concerns, we have developed the Restoration Rapid Assessment Tool (RRAT). RRAT is based on field observations of key indicators of site degradation, stressors influencing the site, value of the site with respect to larger management objectives, likelihood of achieving the management goals, and logistical constraints to restoration. The purpose of RRAT is not to make restoration decisions or prescribe methods, but rather to ensure that a basic set of pertinent issues are considered for each site and to facilitate comparisons among sites. Several concepts have been central to the development of RRAT. First, the management goal (also known as desired future condition) of any site under evaluation should be defined before the field evaluation begins. Second, the evaluation should be based upon readily observable indicators so as to avoid cumbersome field methods. Third, the ease with which site stressors can be ameliorated must be factored into the evaluation. Fourth, intrinsic site value must be assessed independently of current condition. Finally, logistical considerations must also be addressed. Our initial focus has been on riparian areas because they are among the most heavily impacted habitat types, and RRAT indicators reflect this focus.

Report↗

The Sidebar Computer Program, a seismic-shaking intensity meter: users' manual and software description

The SideBar computer program provides a visual display of seismic shaking intensity as recorded at one specific seismograph. This software allows a user to tap into the seismic data recorded on that specific seismograph and to display the overall level of shaking at the single location where that seismograph resides (usually the same place the user is). From this shaking level, SideBar also estimates the potential for damage nearby. SideBar cannot tell you the “Richter magnitude” of the earthquake (see box), only how hard the ground shook locally and this estimate of how much damage is likely in the neighborhood. This combination of local effects is called the “seismic intensity”. SideBar runs on a standard desktop or laptop PC, and is intended for the media, schools, emergency responders, and any other group hosting a seismograph and who want to know immediately after an earthquake the levels of shaking measured by that instrument. These local values can be used to inform the public and help initiate appropriate local emergency response activities in the minutes between the earthquake and availability of the broader coverage provided by the USGS over the Web, notably by ShakeMap. For example, for instruments installed in schools, the level of shaking and likely damage at the school could immediately be Web broadcast and parents could quickly determine the likely safety of their children—their biggest postearthquake concern. Also, in the event of a Web outage, SideBar may be a continuing primary source of local emergency response information for some additional minutes. Specifically, SideBar interprets the peak level of acceleration (that is, the force of shaking, as a percentage of the force of gravity) as well as the peak velocity, or highest speed, at which the ground moves. Using these two basic measurements, SideBar computes what is called Instrumental Intensity—a close approximation of the Modified Mercalli Intensity scale, or “MMI” (using the Wald et al., 1999a, relationships between acceleration, velocity, and shaking intensity). Intensity is a measure of local shaking strength and the potential for damage—of how bad the earthquake effects were locally. The intensity level is what SideBar displays most prominently on the PC monitor. Intensity is shown as a large, colored bar that gets taller and changes color up a rainbow from blues toward reds as the shaking level increases. As opposed to earthquake magnitudes, which are reported as decimal values (like “7.6”), intensity is traditionally given as a Roman numeral, with “I” to “X+” assigned to levels of potential damage and perceived shaking strength. For good measure, SideBar shows the actual values of the force of shaking (peak ground acceleration as a percentage of gravity) and the speed of ground motion (peak ground velocity in inches per second, by default, or in centimeters per second, if you wish), both these values as decimal numbers. SideBar also remembers the most recent earthquakes (for up to one week), and can store as many of these previous earthquakes as the user allows (and as the user’s PC has room for)—typically thousands. SideBar also remembers forever the three largest earthquakes it has seen and all earthquakes over intensity IV so that one never loses particularly important events.

Open-File Report↗

Apatite trace element geochemistry and cathodoluminescent textures—Acomparison between regional magmatism and the Pea Ridge IOA-REE andBoss IOCG deposits, southeastern Missouri iron metallogenic province, USA

The southeast Missouri iron metallogenic province contains a remarkable wealth of historically important Fe, Cu, Au, and rare earth element (REE) deposits including the Pea Ridge iron oxide-apatite-rare earth element (IOA-REE) deposit and the Boss iron oxide-copper-gold (IOCG) deposit. These deposits are coeval with silicic and intermediate composition magmatism in the St. Francois Mountains terrane. Magmatism, iron-oxide (±Cu, Au, Co) and apatite formation, and REE mineralization overlapped in space and time, but the specific role of regional magmatism in the metallogenesis of these deposits remains unclear and basic petrogenetic models are still debated. We report results from high-spatial resolution textural and geochemical analyses of apatite from regional igneous and ore rocks to elucidate their petrogenetic histories and evaluate deposit models. Backscattered electron and spectral cathodoluminescence imaging of apatite reveal no primary igneous zoning, but show different domains with intricate rims and dissolution/reprecipitation textures, each with distinctive REE patterns in many samples. Apatite from all samples are nearly endmember fluorapatite containing up to ~1.3 wt% Cl and F/Cl ratios span nearly three orders of magnitude. Fresh igneous fluorapatite contain low Na2O (0.15 wt%) while most Pea Ridge ore samples contain higher Na2O (up to ~0.45 wt%), and concentrations of sulfur in fluorapatite of all types are generally moderate to low (0.3 wt% SO3). Significant amounts of Fe (60,000 ppm), Mg (30,000 ppm), Mn (7,000 ppm), and Sr (12,000 ppm) are contained in fluorapatite of all sample types, and they also have moderate amounts of As (4,000 ppm), Ba (2,000 ppm), Th (400 ppm), and U (80 ppm). Fluorapatite show an extraordinarily large range of REE (~0.1-2.0 wt%) and Y (~100-7000 ppm) concentrations. While fresh igneous fluorapatite share many geochemical features with metasomatized igneous fluorapatite and ore-stage fluorapatite from the Pea Ridge IOA and Boss IOCG ore zones, they also have distinct geochemical signatures that are indicative of unique trace element partitioning and substitution mechanisms. These distinguishing textural and geochemical signatures preclude ore-zone fluorapatite genesis directly from a magma (i.e., crystallization directly from a silicate melt) but are permissive of ore-zone fluorapatite formation by magmatic-hydrothermal fluids derived from the regional magmas. Basinal brines may play an important role in the formation of fluorapatite, especially from the Pea Ridge hematite and Boss magnetite-rich zones. Fluorapatite from different ore zones likely formed by crystallization during pulses of hydrothermal fluids with varying Cl-, Na-, and F-contents, which fundamentally controlled the carrying capacity and solubility of REE+Y and generated geochemically distinctive generations of fluorapatite. Exploration geologists using fluorapatite trace element geochemistry to identify IOA and IOCG deposits should proceed with caution, as more high-quality data from these deposits are needed to improve multivariate discrimination analysis. Fluorapatite from IOA/IOCG deposits can be reasonably discriminated from that of other mineral deposit types (e.g., porphyry/epithermal, skarn, orogenic), but no criteria successfully discriminate yet between IOA and IOCG deposits.

Missouri↗

The Impacts of flow alterations to crayfishes in Southeastern Oklahoma, with an emphasis on the mena crayfish (orconectes menae)

Human activities can alter the environment to the point that it is unsuitable to the native species resulting in a loss of biodiversity. Ecologists understand the importance of biodiversity and the conservation of vulnerable species. Species that are narrowly endemic are considered to be particularly vulnerable because they often use specific habitats that are highly susceptible to human disturbance. The basic components of species conservation are 1) delineation of the spatial distribution of the species, 2) understanding how the species interacts with its environment, and 3) employing management strategies based on the ecology of the species. In this study, we investigated several crayfish species endemic to the Ouachita Mountains in Oklahoma and Arkansas. We established the spatial distributions (i.e., range) of the crayfish using Maximum Entropy species distribution modeling. We then investigated crayfish habitat use with quantitative sampling and a paired movement study. Finally, we evaluated the ability of crayfish to burrow under different environmental conditions in a controlled laboratory setting. Crayfish distribution at the landscape scale was largely driven by climate, geology and elevation. In general, the endemic crayfish in this study occurred above 300-m elevation where the geology was dominated by sandstone and shale, and rainfall totals were the highest compared to the rest of the study region. Our quantitative data indicated crayfish did not select for specific habitat types at the reach scale; however, crayfish appeared to continue to use shallow and dry habitat even as the streams dried. Movement by passive integrated transponder (PIT) tagged crayfish was highly variable but crayfish tended to burrow in response to drought rather than migrate to wet habitat. Controlled laboratory experiments revealed smaller substrate size (pebble) restricted crayfish burrowing more than larger substrates (cobble). We also found excess fine sediment restricted crayfish burrowing regardless of dominant substrate size. Our results suggest climate change and sedimentation resulting from land-use practices, combined with increased water withdrawals have the potential to alter crayfish distributions and affect persistence of some crayfish populations.

Report↗

Level II scour analysis for Bridge 37 (BARTTH00080037) on Town Highway 8, crossing Willoughby River, Barton, Vermont

This report provides the results of a detailed Level II analysis of scour potential at structure BARTTH00080037 on town highway 8 crossing the Willoughby River, Barton, Vermont (figures 1–8). A Level II study is a basic engineering analysis of the site, including a quantitative analysis of stream stability and scour (U.S. Department of Transportation, 1993). Results of a Level I scour investigation also are included in Appendix E of this report. A Level I investigation provides a qualitative geomorphic characterization of the study site. Information on the bridge, gleaned from Vermont Agency of Transportation (VTAOT) files, was compiled prior to conducting Level I and Level II analyses and is found in Appendix D. The site is in the New England Upland section of the New England physiographic province of north-central Vermont in the town of Barton. The 60.4-mi 2 drainage area is in a predominantly rural and forested basin. In the vicinity of the study site, the banks have sparse to moderate woody vegetation coverage. In the study area, the Willoughby River is probably incised, has a sinuous channel with a slope of approximately 0.009 ft/ft, an average channel top width of 108 ft and an average channel depth of 6 ft. The predominant channel bed material is cobble (D 50 is 95.1 mm or 0.312 ft). The geomorphic assessment at the time of the Level I and Level II site visit on October 20, 1994, indicated that the reach was stable. The town highway 8 crossing of the Willoughby River is a 96-ft-long, two-lane bridge consisting of one 94-foot steel-beam span (Vermont Agency of Transportation, written communication, August 4, 1994). The bridge is supported by vertical, concrete abutments with wingwalls. The channel is skewed approximately 15 degrees to the opening while the opening-skew-to-roadway is 10 degrees. No scour was reported in the channel or along abutments or wingwalls during the Level I assessment. Type-2 stone fill (less than 24 inches diameter) was reported at each abutment and all four wingwalls. Additional details describing conditions at the site are included in the Level II Summary and Appendices D and E. Scour depths and rock rip-rap sizes were computed using the general guidelines described in Hydraulic Engineering Circular 18 (Richardson and others, 1993). Scour depths were calculated assuming an infinite depth of erosive material and a homogeneous particle-size distribution. Data in appendix D (Vermont Agency of Transportation, written communication, August 4, 1994) indicate that the right abutment may be founded on or near marble bedrock which may limit scour depths. Bedrock was not detected by borings in the vicinity of the left abutment. The scour analysis results are presented in tables 1 and 2 and a graph of the scour depths is presented in figure 8. Contraction scour for all modelled flows was 0 ft. Abutment scour ranged from 7.3 to 10.7 ft and the worst-case abutment scour occurred at the 500-year discharge. Additional information on scour depths and depths to armoring are included in the section titled “Scour Results”. Scoured-streambed elevations, based on the calculated scour depths, are presented in tables 1 and 2. A cross-section of the scour computed at the bridge is presented in figure 8. Scour depths were calculated assuming an infinite depth of erosive material and a homogeneous particle-size distribution. It is generally accepted that the Froehlich equation (abutment scour) gives “excessively conservative estimates of scour depths” (Richardson and others, 1993, p. 47). Usually, computed scour depths are evaluated in combination with other information including (but not limited to) historical performance during flood events, the geomorphic stability assessment, existing scour protection measures, and the results of the hydraulic analyses. Therefore, scour depths adopted by VTAOT may differ from the computed values documented herein.

Vermont↗

Catalog of earthquake hypocenters for Augustine, Redoubt, Iliamna, and Mount Spurr volcanoes, Alaska: January 1, 1991 - December 31, 1993

The Alaska Volcano Observatory (AVO), a cooperative program of the U.S. Geological Survey, the Geophysical Institute of the University of Alaska, Fairbanks, and the Alaska Division of Geological and Geophysical Surveys, has maintained a program of seismic monitoring at potentially active volcanoes in the Cook Inlet region since 1988. The principal objectives of this program include the seismic surveillance of the Cook Inlet volcanoes and the investigation of seismic processes associated with active volcanism. This catalog reflects the status and evolution of the seismic monitoring program, and presents the basic seismic data for the time interval January 1, 1991, to December 31, 1993. For an interpretation of these data the reader should refer to several recent articles on volcano related seismicity in the Cook Inlet region (e.g. Jolly and others, 1994; Power and others, 1995; and McNutt and others, 1995). A similar catalog covers the period from October 12, 1989 to December 31, 1991 (Power and others 1993). The AVO seismic monitoring program has undergone significant changes during the catalog period. The changes included 1) new seismic stations placed at Mount Spurr and Redoubt Volcano, resulting in increased earthquake detection capability and improved earthquake locations, 2) the addition of several regional stations to the seismic data acquisition system which improved location quality near the volcano and enhanced our ability to scale eruptions and measure magnitudes of the largest volcanic earthquakes, 3) installation of a new event detection algorithm XDETECT (Rogers, 1993), which offered increased data collection capabilities , 4) modifications to the earthquake location program HYPOELLIPSE (Lahr, 1989) which now allows distinct velocity models and station corrections at each volcanic center, and 5) the addition of seismic stations at Augustine and niamna volcanoes to the data acquisition/location system. The 1992 eruptions at Mount Spurr's Crater Peak vent provided the highlight of the catalog period. The crisis included three sub-plinian eruptions, which occurred on June 27, August 18, and September 16-17, 1992. The three eruptions punctuated a complex seismic sequence which included volcano-tectonic (VT) earthquakes, tremor, and both deep and shallow long period (LP) earthquakes. The seismic sequence began on August 18, 1991, with a small swarm of volcano-tectonic events beneath Crater Peak, and spread throughout the volcanic complex by November of the same year. Elevated levels of seismicity persisted at Mount Spurr beyond the catalog time period.

Alaska↗

Montana; basic data for thermal springs and wells as recorded in Geotherm

Changes in ground-water withdrawals, water levels, and quality of water occurred in the artesian aquifers of the Sevier Desert, Utah during 1963-81. Ground-water withdrawals increased from an average of 9,500 acre-feet (11.7 cubic hectometers) per year between 1951 and 1963 to an average of 27,500 acre-feet (33.9 cubic hectometers) per year between 1964 and 1981. Most of the increased withdrawal was from the deep artesian aquifer. Water levels declined as much as 19 feet (5.8 meters) in the deep artesian aquifer and as much as 13 feet (4.0 meters) in the shallow artesian aquifer between 1963 and 1981. The declines probably are due to increased ground-water withdrawals for irrigation and municipal use. Quality of water in parts of the shallow artesian aquifer is deteriorating. The deterioration probably is the result of recharge of poor quality from the overlying water-table aquifer. A digital-computer model was constructed to predict water-level changes resulting from changes in recharge and discharge for 20 years (1981-2000) at one-half, one, and two times the 1977-79 average rate. The model computer water-level declines of more than 80 feet (24 meters) in the deep artesian aquifer with withdrawals twice the 1977-79 average, declines of more than 40 feet (12 meters) if withdrawals were equal to the 1977-79 average, and declines of more than 15 feet (4.6 meters) if withdrawals were one-half the 1977-79 average. Computer water-level declines after 20 years in the shallow artesian aquifer were more than 50 feet (15 meters) at two times the 1977-79 average rate, more than 15 feet (4.6 meters) at the 1977-79 average, and less than 4 feet (1.2 meters) at one-half the 1977-79 average. The model also was used to predict the effects of approximate changes in ground-water withdrawals related to the Intermountain Power Project. Water-level declines in the deep artesian aquifer of more than 15 feet (4.6 meters), and only small changes in water levels in the shallow artesian aquifer after 20 years. These changes are in addition to changes computed for 20 years of withdrawals at the 1977-79 rate. (USGS)

Open-File Report↗

The National Map 2.0 Tactical Plan: "Toward the (Integrated) National Map"

The National Map's 2-year goal, as described in this plan, is to provide a range of geospatial products and services that meet the basic goals of the original vision for The National Map while furthering the National Spatial Data Infrastructure that underpins U.S. Geological Survey (USGS) science. To accomplish this goal, the National Geospatial Program (NGP) will acquire, store, maintain, and distribute base map data. The management team for the NGP sets priorities for The National Map in three areas: Data and Products, Services, and Management. Priorities for fiscal years 2008 and 2009 (October 1, 2007 through September 30, 2009), involving the current data inventory, data acquisition, and the integration of data, are (1) incorporating current data from Federal, State, and local organizations into The National Map to the degree possible, given data availability and program resources; (2) collaborating with other USGS programs to incorporate data that support the USGS Science Strategy; (3) supporting the Department of the Interior (DOI) high-priority geospatial information needs; (4) emergency response; (5) homeland security, natural hazards; and (6) graphics products delivery. The management team identified known constraints, enablers, and drivers for the acquisition and integration of data. The NGP management team also identified customer-focused products and services of The National Map. Ongoing planning and management activities direct the development and delivery of these products and services. Management of work flow processes to support The National Map priorities are identified and established through a business-driven prioritization process. This tactical plan is primarily for use as a document to guide The National Map program for the next two fiscal years. The document is available to the public because of widespread interest in The National Map. The USGS collaborates with a broad range of customers and partners who are essential to the success of The National Map, including the science community, State and Federal agencies involved in homeland security, planners and emergency responders at the local level, and private companies. Partner contributions and data remain a primary input and foundation of The National Map. Partnership strategies for each of The National Map's component data themes are outlined in this plan. Because of the importance of The National Map customers, a reassessment of customer needs will be completed during 2008. Results of the assessment will be incorporated into future decisions and priorities. A performance milestone matrix has been developed that contains the full list of milestones, major deliverables, and major tasks. The matrix forms the basis for reporting on accomplishments and issues. However, a number of risks, dependencies, and issues have been identified that could affect meeting milestones in the matrix, such as: the USGS is not the Circular A-16 lead for boundaries, transportation, and structures; availability of sufficient and sustainable funding; availability of Federal workforce and contractors with necessary skills, and numerous competing customer and stakeholder requirements.

Open-File Report↗

Techniques for assessing water resource potentials in the developing countries: with emphasis on streamflow, erosion and sediment transport, water movement in unsaturated soils, ground water, and remote sensing in hydrologic applications

Hydrologic instrumentation and methodology for assessing water-resource potentials have originated largely in the developed countries of the temperature zone. The developing countries lie largely in the tropic zone, which contains the full gamut of the earth's climatic environments, including most of those of the temperate zone. For this reason, most hydrologic techniques have world-wide applicability. Techniques for assessing water-resource potentials for the high priority goals of economic growth are well established in the developing countries--but much more are well established in the developing countries--but much more so in some than in other. Conventional techniques for measurement and evaluation of basic hydrologic parameters are now well-understood in the developing countries and are generally adequate for their current needs and those of the immediate future. Institutional and economic constraints, however, inhibit growth of sustained programs of hydrologic data collection and application of the data to problems in engineering technology. Computer-based technology, including processing of hydrologic data and mathematical modelling of hydrologic parameters i also well-begun in many developing countries and has much wider potential application. In some developing counties, however, there is a tendency to look on the computer as a panacea for deficiencies in basic hydrologic data collection programs. This fallacy must be discouraged, as the computer is a tool and not a "magic box." There is no real substitute for sound programs of basic data collection. Nuclear and isotopic techniques are being used increasingly in the developed countries in the measurement and evaluation of virtually all hydrologic parameter in which conventional techniques have been used traditionally. Even in the developed countries, however, many hydrologists are not using nuclear techniques, simply because they lack knowledge of the principles involved and of the potential benefits. Nuclear methodology in hydrologic applications is generally more complex than the conventional and hence requires a high level of technical expertise for effective use. Application of nuclear techniques to hydrologic problems in the developing countries is likely to be marginal for some years to come, owing to the higher costs involved and expertise required. Nuclear techniques, however, would seem to have particular promise in studies of water movement in unsaturated soils and of erosion and sedimentation where conventional techniques are inadequate, inefficient and in some cases costly. Remote sensing offers great promise for synoptic evaluations of water resources and hydrologic processes, including the transient phenomena of the hydrologic cycle. Remote sensing is not, however, a panacea for deficiencies in hydrologic data programs in the developing countries. Rather it is a means for extending and augmenting on-the-ground observations ans surveys (ground truth) to evaluated water resources and hydrologic processes on a regionall or even continental scale. With respect to economic growth goals in developing countries, there are few identifiable gaps in existing hydrologic instrumentation and methodology insofar as appraisal, development and management of available water resources are concerned. What is needed is acceleration of institutional development and professional motivation toward more effective use of existing and proven methodology. Moreover, much sophisticated methodology can be applied effectively in the developing countries only when adequate levels of indigenous scientific skills have been reached and supportive institutional frameworks are evolved to viability.

Open-File Report↗