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Results for “Journal of Fisheries Management”

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At least 739 records · Page 41Linked to original sources

USGS2018

Hearing capabilities and behavioural response of sea lamprey (Petromyzon marinus) to low frequency sounds

Hearing ability is well studied across teleost fishes in general, and vertebrates more broadly, but little is known about sound detection abilities of lampreys (Petromyzontiformes), a basal extant vertebrate group. The sea lamprey ( Petromyzon marinus ) is a destructive invader of the Laurentian Great Lakes, while numerous lamprey species (including the sea lamprey) are imperiled in their native ranges. In both management scenarios, behavioral manipulation tactics to control movement and distribution are desired. Therefore, we describe the hearing ability and behavioral responses of adult and juvenile sea lamprey to sound to reveal how hearing may have evolved in vertebrates and determine possible management applications. Based on auditory evoked potentials, sea lamprey detected tones of 50–300 Hz with equal sensitivity, but did not detect sounds above 300 Hz. In a laboratory bioassay, sea lamprey behaviorally responded to sound range of 50–200 Hz, with a general increase in swimming and a decrease in resting behaviours at both juvenile and adult stages relative to no-sound controls. To our knowledge, this is the first test of lamprey hearing, and the results support that sound may be a means to modify lamprey behaviour for management purposes.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2000

Molecular epidemiology reveals emergence of a virulent infectious hematopoietic necrosis (IHN) virus strain in wild salmon and its transmission to hatchery fish

Infectious hematopoietic necrosis virus (IHNV) has been known to be a significant salmonid pathogen in the Pacific Northwest of North America for decades. The goal of this study was to characterize the IHNV genetic heterogeneity and viral traffic over time at a study site in the Deschutes River watershed in Oregon, with an emphasis on the epidemiology of IHNV types causing epidemics in wild kokanee Oncorhynchus nerka between 1991 and 1995. The study site included kokanee spawning grounds in the Metolius River and Lake Billy Chinook downstream, in which the IHNV epidemics occurred in 2- and 3-year-old kokanee, and the Round Butte Fish Hatchery at the outflow of the lake. Forty-two IHNV isolates collected from this area between 1975 and 1995 were characterized on a genetic basis by ribonuclease (RNase) protection fingerprint analyses of the virus nucleocapsid, glycoprotein, and nonvirion genes. Analysis of the 16 identified composite haplotypes suggested that both virus evolution and introduction of new IHNV strains contributed to the genetic diversity observed. The results indicated that the 1991–1995 epidemics in kokanee from Lake Billy Chinook were due to a newly introduced IHNV type that was first detected in spawning adult kokanee in 1988 and that this virus type was transmitted from the wild kokanee to hatchery fish downstream in 1991. Twelve IHNV haplotypes were found at Round Butte Fish Hatchery, indicating a series of virus displacement events during the 20-year period examined. This work shows that IHNV traffic can be much more complex than was previously recognized, and the results have implications for fisheries management at the hatchery and throughout the watershed.

Oregon↗

USGS2008

Effectiveness of piscicides for controlling round gobies (Neogobius melanostomus)

Round gobies (Neogobius melanostomus) were introduced to the Great Lakes presumably as a result of ballast water releases from seagoing freighters returning from European water bodies. These unwelcome fish have become established in the Great Lakes region and are expanding their range to suitable portions of other interior drainage basins including the Mississippi River traversing the central United States and the Trent-Severn waterway spanning south-central Ontario. If the invasion continues, use of chemical toxicants as a control measure may be necessary. Toxicity tests of the currently registered piscicides antimycin, rotenone, 3-trifluoromethyl-4-nitrophenol (TFM), and Bayluscide?? were conducted with three fish species native to the Great Lakes and round gobies collected from the Illinois Waterway. Tests indicated that round gobies are sensitive to all of the piscicides, however, the level of sensitivity is similar to that of the native fish species tested. Therefore, currently registered piscicides have limited potential to selectively remove round gobies. Bottom-release formulations of Bayluscide?? and antimycin were also evaluated as control agents for the normally bottom-dwelling round goby. Avoidance behavior tests demonstrated that the round goby did not react to the presence of either chemical. Therefore, the bottom-release formulations may have some application for the selective removal of round gobies, and may be one of the few tools presently available to fishery managers to help limit the range expansion of this invasive fish.

Journal of Great Lakes Research↗

USGS2012

Age, growth, and reproductive biology of three catostomids from the Apalachicola River, Florida

Riverine catostomids can show a wide range of interspecific variation in life-history characteristics. Understanding these differences is an important consideration in evaluating the sensitivity of these fishes to disturbance and in formulating effective conservation strategies, particularly when dealing with an assemblage consisting of multiple species within a watershed. We collected Apalachicola redhorse Moxostoma n. sp. cf. poecilurum ( n = 125), spotted sucker Minytrema melanops ( n = 94), and quillback Carpiodes cyprinus ( n = 94) to determine age, growth, and reproductive biology of spawning catostomids in the Apalachicola River, Florida, during 2007. Quillback was the smallest in total length at age; longest-lived; most fecund; and produced the smallest eggs. Apalachicola redhorse was the largest in body size; had an intermediate life span; and produced the fewest yet largest eggs. Spotted sucker was more similar to Apalachicola redhorse in most characteristics. Growth during ages 1-3 in all three species seemed to be negatively related to the proportion of observations of extreme flow, both high (Q 90 ) and low (Q 10 ), per year and a positive response in growth rate to high flows (>Q 75 but < Q 90 ). However, Apalachicola redhorse and spotted sucker growth was more sensitive to flow conditions than that of quillback. Our results suggest the life histories and ecological response of Apalachicola River catostomids to flow regulation are important components for developing strategies that incorporate the needs of these fishery resources into an ecosystem-based management approach.

Florida↗

USGS2022

Balancing prey availability and predator consumption: A multispecies stock assessment for Lake Ontario

Trophic interactions are drivers of ecosystem change and stability, yet are often excluded from fishery assessment models, despite their potential capacity to improve estimates of species dynamics and future fishery sustainability. In Lake Ontario, recreational salmonine fisheries, including Chinook salmon ( Oncorhynchus tshawytscha ) and lake trout ( Salvelinus namaycush ), depend on a single prey species, alewife ( Alosa pseudoharengus ). To accommodate strong trophic interactions among species, we developed a multispecies statistical catch-at-age assessment (MSCAA) model that links the dynamics of the salmonine fisheries and alewife via prey consumption and predator growth. We found that prey availability had declined since 2015 due to decreased alewife recruitment and increased Chinook salmon biomass, leading to higher alewife mortality rates and lower predator growth rates. Forward projections of predator–prey dynamics suggest that Chinook salmon stocking reductions may improve the probability for alewife population growth, but could be counteracted by increased natural Chinook salmon recruitment. Combined with predator- and prey-monitoring efforts, multispecies assessments show promise as models of intermediate complexity to support a transition to ecosystem-based approaches to fisheries management.

Lake Ontario↗

USGS2023

The scale-dependent role of submerged macrophytes as drift-feeding lotic fish habitat

Although submerged macrophyte (hereafter, “macrophyte”) communities are globally prevalent in low-gradient rivers, the net reach-scale effect of macrophytes on drift-feeding fish microhabitat preference is poorly understood. We used snorkeling and bioenergetics to study fish habitat selection for rainbow trout ( Oncorhynchus mykiss ) in the Henrys Fork, ID, USA, investigating microhabitat preference across a reach-scale gradient of macrophyte growth. Fish preferred microhabitats with deep water, low velocity, and low macrophyte coverage. Preferences for microhabitats with higher net rate of energy intake (NREI) were modulated by reach-scale macrophyte coverage, higher coverage increasing preferences for higher NREI. Macrophyte coverage was a weak positive predictor for depth and NREI, and a weak negative predictor for water velocity and median substrate. Our results suggest trade-offs between fish predation risk and bioenergetic food intake, with macrophytes modulating these trade-offs across scales by affecting reach-scale geomorphology, bioenergetics, and predation risk. As such, this study highlights the important and dynamic role that macrophytes can play in fish population dynamics in rivers, with important implications for management decisions.

Idaho↗

USGS2024

Quantifying uncertainty when extrapolating the relationship between snorkel counts and mark-recapture estimates of juvenile salmonids

Snorkel surveys are frequently used to monitor stream-dwelling fish. Inferring local abundance from snorkel surveys is complicated by two primary factors: variable fish detection probabilities and the relative abundance of fish in habitat types below the recommended minimum depth for snorkeling. We examine these factors across three salmonid species ( Oncorhynchus spp . ), 4 years, and 113 location-years in Oregon coastal streams. We calibrate snorkel counts to mark-recapture estimates and develop mathematically explicit expressions that convert a new snorkel count into a probability density of abundance for streams containing mixed habitat types that were and were not snorkeled. Snorkelers detected 63%, 47%, and 39% of juvenile coho salmon ( Oncorhynchus kitsutch ), steelhead trout ( Oncorhynchus mykiss ), and cutthroat trout ( Oncorhynchus clarkii clarkia ) estimated by mark-recapture, respectively, but uncertainty within and among sampling units was high. Further, analytics developed here can be used to infer abundance and uncertainty for habitat types that were not snorkeled. Our quantification of uncertainty arising from using snorkel counts as a proxy for abundance will help managers balance biological risks with available resources.

Oregon↗

USGS2019

Integrating management strategy evaluation into fisheries management: Advancing best practices for stakeholder inclusion based on an MSE for Northeast US Atlantic herring

The New England Fishery Management Council used management strategy evaluation (MSE) to evaluate possible harvest control rules for Atlantic herring ( Clupea harengus ), the first MSE in the US and perhaps globally to use open-invitation, public workshops for input. Stakeholder inclusion can increase both realism and likelihood of use by managers, but inclusivity is not achieved easily. Here, self-selected participants had diverse backgrounds and differing levels of interest and preparedness. We describe some challenges with directly engaging the public in MSE and offer broader insights for obtaining effective public participation during a decision-making process. Conducting an open MSE aligns well with publicly driven management but requires clear goals and communication. Investment in effective organizers, impartial facilitators, and knowledgeable analysts can improve communication and understanding of MSE to the betterment of fisheries management. We aim to further MSE best practices on integrating stakeholders and hope that our lessons learned on communication, engagement, and integration of MSE into an existing management arena will be useful to other practitioners.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2008

Annual variation in habitat-specific recruitment success: Implications from an individual-based model of Lake Michigan alewife (Alosa pseudoharengus)

The identification of important spawning and nursery habitats for fish stocks can aid fisheries management, but is complicated by various factors, including annual variation in recruitment success. The alewife (Alosa pseudoharengus) is an ecologically important species in Lake Michigan that utilizes a variety of habitats for spawning and early life growth. While productive, warm tributary mouths (connected to Lake Michigan) may contribute disproportionately more recruits (relative to their habitat volume) to the adult alewife population than cooler, less productive nearshore habitats, the extent of interannual variation in the relative contributions of recruits from these two habitat types remains unknown. We used an individual-based bioenergetics simulation model and input data on daily temperatures to estimate alewife recruitment to the adult population by these different habitat types. Simulations suggest that nearshore lake habitats typically produce the vast majority of young alewife recruits. However, tributary habitats may contribute the majority of alewife recruits during years of low recruitment. We suggest that high interannual variation in the relative importance of habitats for recruitment is a common phenomenon, which should be considered when developing habitat management plans for fish populations. ?? 2008 NRC.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2001

Growth rate responses of Missouri and lower Yellowstone river fishes to a latitudinal gradient

Growth rate coefficients estimated for channel catfish Ictalurus punctatus, emerald shiners Notropis atherinoides, freshwater drums Aplodinotus grunniens, river carpsuckers Carpiodes carpio and saugers Stizostedion canadense collected in 1996-1998 from nine river sections of the Missouri and lower Yellowstone rivers at two life-stages (young-of-the-year and age 1 + years) were significantly different among sections. However, they showed no river-wide latitudinal trend except for age 1 + years emerald shiners that did show a weak negative relation between growth and both latitude and length of growing season. The results suggest growth rates of fishes along the Missouri River system are complex and could be of significance in the management and conservation of fish communities in this altered system. ?? 2001 The Fisheries Society of the British Isles.

Journal of Fish Biology↗

USGS1999

Evaluation of the flood-pulse concept based on statistical models of growth of selected fishes of the upper Mississippi River system

The flood-pulse concept (FPC) states that annual inundation is the principal force responsible for productivity and biotic interactions in river-floodplain systems. Somatic growth is one component of production, and we hypothesized that, if the FPC applies, growth of fishes that use the moving littoral zone should differ among years with differing flood pattern, whereas nonlittoral fishes would show no such response. Growth of largemouth bass (Micropterus salmoides) and bluegill (Lepomis macrochirus), species that exploit littoral resources, increased during a year having an unusual warm-season flood in the Upper Mississippi River system and was reduced during low-water years. Growth of white bass (Morone chrysops), which do not rely heavily on the littoral zone, did not differ significantly between the extreme-flood and low-water years. Patterns of growth of black crappie (Pomoxis nigromaculatus), which have intermediate dependence on the moving littoral zone, were somewhat ambiguous. These results are consistent with the hypothesis that the FPC applies, at least under certain conditions, to this temperate river system. Our results can also provide an important basis from which to assess some costs and benefits of water level management strategies in large regulated temperate rivers.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2009

Determining the efficacy of microsatellite DNA-based mixed-stock analysis of Lake Michigan’s lake whitefish commercial fishery

Management of commercially exploited fish should be conducted at the stock level. If a mixed stock fishery exists, a comprehensive mixed stock analysis is required for stock-based management. The lake whitefish Coregonus clupeaformis comprises the primary commercial fishery across the Great Lakes. Recent research resolved that six genetic stocks of lake whitefish were present in Lake Michigan, and long-term tagging data indicate that Lake Michigan's lake whitefish commercial fishery is a mixed stock fishery. The objective of this research was to determine the usefulness of microsatellite data for conducting comprehensive mixed stock analyses of the Lake Michigan lake whitefish commercial fishery. We used the individual assignment method as implemented in the program ONCOR to determine the accuracy level at which microsatellite data can reliably identify component populations or stocks. Self-assignment of lake whitefish to their population and stock of origin ranged from > 96% to 100%. Evaluation of genetic stock discreteness indicated a moderately high degree of correct assignment (average = 75%); simulations indicated supplementing baseline data by &sim; 50 to 100 individuals could increase accuracy by up to 4.5%. Simulated mixed stock commercial harvests with known stock composition showed a high degree of correct proportional assignment between observed and predicted harvest values. These data suggest that a comprehensive mixed stock analysis of Lake Michigan's lake whitefish commercial fishery is viable and would provide valuable information for improving management.

Michigan, Wisconsin↗

USGS2019

A Bayesian life-cycle model to estimate escapement at maximum sustained yield in salmon based on limited information

Life-cycle models combine several strengths for estimating population parameters and biological reference points of harvested species and are particularly useful for those exhibiting distinct habitat shifts and experiencing contrasting environments. Unfortunately, time series data are often limited to counts of adult abundance and harvest. By incorporating data from other populations and by dynamically linking the life-history stages, Bayesian life-cycle models can be used to estimate stage-specific productivities and capacities as well as abundance of breeders that produce maximum sustained yield (MSY). Using coho salmon ( Oncorhynchus kisutch ) as our case study, we show that incorporating information on marine survival variability from nearby populations can improve model estimates and affect management parameters such as escapement at MSY. We further show that the expected long-term average yield of a fishery managed for a spawner escapement target that produces MSY strongly depends on the average marine survival. Our results illustrate the usefulness of incorporating information from other sources and highlight the importance of accounting for variation in marine survival when making inferences about the management of Pacific salmon.

Washington↗

USGS2017

At the forefront: evidence of the applicability of using environmental DNA to quantify the abundance of fish populations in natural lentic waters with additional sampling considerations

Environmental DNA (eDNA) sampling has proven to be a valuable tool for detecting species in aquatic ecosystems. Within this rapidly evolving field, a promising application is the ability to obtain quantitative estimates of relative species abundance based on eDNA concentration rather than traditionally labor-intensive methods. We investigated the relationship between eDNA concentration and Arctic char ( Salvelinus alpinus ) abundance in five well-studied natural lakes; additionally, we examined the effects of different temporal (e.g., season) and spatial (e.g., depth) scales on eDNA concentration. Concentrations of eDNA were linearly correlated with char population estimates ( = 0.78) and exponentially correlated with char densities ( = 0.96 by area; 0.82 by volume). Across lakes, eDNA concentrations were greater and more homogeneous in the water column during mixis; however, when stratified, eDNA concentrations were greater in the hypolimnion. Overall, our findings demonstrate that eDNA techniques can produce effective estimates of relative fish abundance in natural lakes. These findings can guide future studies to improve and expand eDNA methods while informing research and management using rapid and minimally invasive sampling.

Canadian Journal of Fisheries and Aquatic Sciences↗

USGS2007

Regional differences in size-at-age of the recovering burbot ( Lota lota ) population in Lake Erie

The burbot Lota lota population in Lake Erie increased dramatically between 1995 and 2003, due mainly to control of the sea lamprey Petromyzon marinus , which began in the late 1980s. We estimated total length- and weight-at-age at capture for burbot caught in annual gillnet surveys of eastern Lake Erie during August 1994–2003. Mean total length was generally greater for burbot age 4–9 years that were caught in New York waters than in either Ontario or Pennsylvania waters of Lake Erie. Similarly, mean weight was greater for burbot at ages 4 through 6 years in New York waters than in either Ontario or Pennsylvania waters. Age-9 burbot caught in Ontario waters had greater mean weight and mean total length than did age-9 burbot caught in Pennsylvania waters. One possible explanation for greater length- and weight-at-age for New York burbot may be greater abundance of prey fishes, particularly rainbow smelt Osmerus mordax and round goby Neogobius melanostomus in New York waters. Total lengths at ages 4–10 years were generally greater for burbot caught in Lake Erie during 1994–2003 than those from published studies of other large lakes in North America that we considered, including for Lake Erie in 1946. The regional differences in size-at-age have important management ramifications, particularly because a commercial fishery targeting burbot has been considered for Ontario waters of Lake Erie.

Journal of Great Lakes Research↗

USGS2018

Comparison of genetic and visual identification of cisco and lake whitefish larvae from Chaumont Bay, Lake Ontario

Cisco Coregonus artedi are an important component of native food webs in the Great Lakes, and their restoration is instrumental to the recovery of lake trout Salvelinus namaycush and Atlantic salmon Salmo salar . Difficulties with visual identification of larvae can confound early life history surveys, as cisco are often difficult to distinguish from lake whitefish C. clupeaformis . We compared traditional visual species identification methods to genetic identifications based on barcoding of the mitochondrial cytochrome C oxidase I gene for 726 coregonine larvae caught in Chaumont Bay, Lake Ontario. We found little agreement between the visual characteristics of cisco identified by genetic barcoding and the most widely used dichotomous key, and the considerable overlap in ranges of traditionally utilized metrics suggest that visual identification of coregonine larvae from Chaumont Bay is impractical. Coregonines are highly variable and plastic species, and often display wide variations in morphometric characteristics across their broad range. This study highlights the importance of developing accurate, geographically appropriate larval identification methods in order to best inform cisco restoration and management efforts.

New York↗

USGS2026

Silver Carp Hypophthalmichthys molitrix broad movement patterns and dispersal dynamics in the upper Mississippi River

Rivers are important movement corridors for fishes that allow for population connectivity. Within the upper Mississippi River Basin, invasive Silver Carp ( Hypophthalmichthys molitrix ) use tributaries including the Des Moines, Iowa, and Cedar rivers; however, the extent Silver Carp move and intermix among these systems and pools of the upper Mississippi River (UMR) is largely unknown. We used acoustic telemetry and multistate models to (1) identify individual and spatial variability in movement strategies, (2) use survival and transition probability estimates to evaluate population dynamics and connectivity, and (3) evaluate the influence of temporal and environmental variables on survival and transition probabilities. Weekly transition probabilities generally increased with discharge and ranged between 0.01 from UMR Pool 20 to outside the study area at 575 m 3 /s to 0.75 from UMR Pool 18 to outside the study area at 7200 m 3 /s. Survival decreased as temperature increased from 0 to 30 °C and was higher in tributaries than mainstem pools correlated with lower discharge. Overall, Silver Carp displayed diverse movement strategies with high connectivity that can inform invasive species management strategies.

upper Mississippi River↗

USGS2007

Quantifying the impact of longline fisheries on adult survival in the black-footed albatross

1. Industrial longline fishing has been suspected to impact upon black-footed albatross populations Phoebastria nigripes by increasing mortality, but no precise estimates of bycatch mortality are available to ascertain this statement. We present a general framework for quantifying the relationship between albatross population and longline fishing in absence of reliable estimates of bycatch rate. 2. We analysed capture-recapture data of a population of black-footed albatross to obtain estimates of survival probability for this population using several alternative models to adequately take into account heterogeneity in the recapture process. Instead of trying to estimate the number of birds killed by using various extrapolations and unchecked assumptions, we investigate the potential relationship between annual adult survival and several measures of fishing effort. Although we considered a large number of covariates, we used principal component analysis to generate a few uncorrelated synthetic variables from the set and thus we maintained both power and robustness. 3. The average survival for 1997-2002 was 92%, a low value compared to estimates available for other albatross species. We found that one of the synthetic variables used to summarize industrial longline fishing significantly explained more than 40% of the variation in adult survival over 11 years, suggesting an impact by longline fishing on albatross' survival. 4. Our analysis provides some evidence of non-linear variation in survival with fishing effort. This could indicate that below a certain level of fishing effort, deaths due to incidental catch can be partially or totally compensated for by a decrease in natural mortality. Another possible explanation is the existence of a strong interspecific competition for accessing the baits, reducing the risk of being accidentally hooked. 5. Synthesis and applications . The suspicion of a significant impact of longline fishing on the black-footed albatross population was supported by the combination of a low estimate of adult survival for the study period, and a significant relationship between adult survival and a synthetic measure of fishing effort. This study highlights the sensitivity of the black-footed albatross to commercial longline fishing, and should exhort fishery management authorities to find adequate seabirds avoidance methods and to encourage their employment.

Journal of Applied Ecology↗