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USGS2015

Development of an assessment tool for agricultural best management practice implementation in the Great Lakes restoration initiative priority watersheds—Eagle Creek, tributary to Maumee River, Ohio

Introduction The Great Lakes face a number of serious challenges that cause damage to water quality, habitat, ecology, and coastal health. Excess nutrients from point and nonpoint sources have a history of causing harmful algal blooms (HABs); since the late 1990s, a resurgence of HABs have forced beach closures and resulted in water quality impairments across the Great Lakes. Studies increasingly point to phosphorus (P) runoff from agricultural lands as the cause of these HABs. In 2010, the Great Lakes Restoration Initiative (GLRI) was launched to revitalize the Great Lakes. The GLRI aims to address the challenges facing the Great Lakes and provide a framework for restoration and protection. As part of this effort, the Priority Watersheds Work Group (PWWG), cochaired by the U.S. Environmental Protection Agency (EPA) and the U.S. Department of Agriculture-Natural Resources Conservation Service (USDA–NRCS), is targeting Priority Watersheds (PWs) to reduce the amount of P reaching the Great Lakes. Within the PWs, USDA–NRCS identifies small-scale subbasins with high concentrations of agriculture for coordinated nutrient reduction efforts and enhanced monitoring and modeling. The USDA–NRCS supplies financial and/or technical assistance to producers to install or implement best management practices (BMPs) to lessen the negative effects of agriculture to water quality; additional funding is provided by the GLRI through USDA–NRCS to saturate the small-scale subbasins with BMPs. The watershed modeling component, introduced in this fact sheet, assesses the effectiveness of USDA–NRCS funded BMPs, and nutrient reductions because of GLRI or other funding programs are differentiated. Modeling scenarios consider BMPs that have already been applied and those planned to be implemented across the small-scale subbasins.

Ohio↗

USGS2024

Results of 2018–19 water-quality and hydraulic characterization of aquifer intervals using packer tests and preliminary geophysical-log correlations for selected boreholes at and near the former Naval Air Warfare Center Warminster, Bucks County, Pennsylvania

The U.S. Geological Survey (USGS) collected data on the vertical distribution of hydraulic head, specific capacity, and water quality using aquifer-interval-isolation tests and other vertical profiling methods in 15 boreholes completed in fractured sedimentary bedrock in Northampton, Warminster, and Warwick Townships, Bucks County, Pennsylvania during 2018–19. This work was done, in cooperation with the U.S. Navy, to support detailed investigations at and near the former Naval Air Warfare Center (NAWC) Warminster, where groundwater contamination with per- and polyfluoroalkyl substances (PFAS) had become a concern since 2014. Two PFAS compounds, perfluorooctanesulfonic acid (PFOS) and perfluorooctanoic acid (PFOA), have been measured in groundwater samples from supply and monitoring wells at or near NAWC Warminster in concentrations above U.S. Environmental Protection Agency health advisory levels for drinking water. The area is underlain by the Triassic Stockton Formation, which predominantly consists of sandstone interbedded with shale and siltstone beds and forms a layered fractured-rock aquifer used for private, industrial, and public drinking water supply. The vertical distribution of aquifer properties and water quality was assessed through hydraulic tests and sampling of aquifer intervals using a straddle-packer system (13 boreholes) or depth-discrete point sampling under known borehole-flow conditions (2 boreholes). Geophysical and video logs collected by USGS during 2017–19 were used to identify potential water-bearing fractures in 15 boreholes, which ranged in depth from 210 to 604 feet (ft) and included 6 boreholes drilled in 2018 and 9 existing wells on or near the former NAWC Warminster. Measured borehole flow was predominantly downward in most of the deepest boreholes (greater than 400 ft), which were commonly located at the highest land-surface elevations, with inflow from fractures at relatively shallow depths and outflow through fractures near or below depths of 500 ft below land surface. Hydraulic head differences measured during packer tests were up to about 60 ft between shallow and deep intervals. Borehole flow was predominantly upward in most boreholes less than 400 ft in depth and farther from, and at lower land-surface elevations than, the former NAWC Warminster. Total borehole specific capacity ranged from about 0.07 to 41 gallons per minute per foot [(gal/min)/ft]. Specific-capacity values for individual intervals ranged from 0.02 to 40.0 (gal/min)/ft, with a median of 1.14 (gal/min)/ft and a large range in values at most depths. Differences in water quality of samples as indicated by field properties (pH, dissolved oxygen, and specific conductance) and concentrations of dissolved major ions, PFOA, and PFOS were apparent among isolated intervals in the boreholes. Summed concentrations of PFOA and PFOS ranged from about 11 to 10,780 nanograms per liter (ng/L) and were greater than the 2016 U.S. Environmental Protection Agency health advisory of 70 ng/L for summed PFOA and PFOS concentrations in 62 of 104 intervals and discrete depths tested. The mass ratio of PFOS to PFOA was generally higher than 1.0 in samples with summed PFOA and PFOS concentrations greater than 70 ng/L, with ratio values as high as 8.7. In many boreholes, summed concentrations of PFOA and PFOS were positively related to chloride concentrations, which were elevated above natural-background values [less than 10 milligrams per liter] in most samples and as high as 717 milligrams per liter. Sources of the elevated chloride other than, or in addition to, common rock salt (sodium chloride) were indicated by chloride to sodium molar ratios greater than 1.0. Water-quality data indicated that sampled water from some intervals with lower hydraulic heads may be affected by water from intervals with higher hydraulic heads because of vertical flow in open boreholes; samples from these intervals with lower hydraulic heads may not be fully representative due to some component of cross contamination and should be interpreted with caution. Through a preliminary correlation of natural gamma and resistivity logs of boreholes drilled at and near the former NAWC Warminster, 11 lithologic units were identified and interpreted to strike northeast and dip to the northwest. Hydraulic heads were generally highest in isolated intervals that intercepted beds which, when projected up dip, crop out at the highest land-surface elevation on the former NAWC Warminster, indicating that the dipping-bed structure and topography are factors affecting the distribution of hydraulic head in the aquifer. The hydrogeologic framework in conjunction with the vertical distribution of hydraulic heads and water quality may assist in evaluating the locations of various PFAS sources and potential migration pathways of PFAS in groundwater at and near NAWC Warminster.

Pennsylvania↗

USGS1995

Water-quality characteristics of five tributaries to the Chesapeake Bay at the Fall Line, Virginia, July 1988 through June 1993

Development in the Chesapeake Bay region has adversely affected the water quality of the Bay. The general degradation in the Bay has resulted in the decline of commercial fishing industries and has reduced the area of aquatic vegetation that provides food and habitat for fish and shellfish. In order to assess the effectiveness of programs aimed at reducing the effects of excess nutrients and suspended solids on Chesapeake Bay, it is necessary to quantify the loads of these constituents into the Bay, and to evaluate the trends in water quality. This report presents the results of a study funded by the Virginia Department of Environmental Quality Chesapeake Bay and Coastal Programs and the U.S. Geological Survey, to monitor and estimate loads of selected nutrients and suspended solids discharged to Chesapeake Bay from five major tributaries in Virginia. The water-quality data and load estimates provided in this report also will be used to calibrate computer models of Chesapeake Bay. Water-quality constituents were monitored in the James and Rappahannock Rivers over a 5-year period, and in the Pamunkey, Appomattox, and Mattaponi Rivers over a 4-year period. Water-quality samples were collected from July 1, 1988 through June 30, 1993, for the James and Rappahannock Rivers; from July 1, 1989 through June 30, 1993, for the Pamunkey and Appomattox Rivers; and from September 1,1989 through June 30, 1993, for the Mattaponi River. Water-quality samples were collected on a scheduled basis and during stormflow to cover a range in discharge conditions. Monitore water-quality constituents, for which loads were estimated include total suspended solids (residue, total at 105° Celsius), dissolved nitrite-plus-nitrate nitrogen, dissolved ammonia nitrogen, total Kjeldahl nitrogen, total nitrogen, total phosphorus, dissolved orthophosphorus, total organic carbon, and dissolved silica. Organic nitrogen concentrations were calculated from measurements of ammonia and total Kjeldahl nitrogen, and organic nitrogen loads were estimated using these calculations. Other selected water-quality constituents were monitored for which loads were not calculated. Daily mean load estimates of each constituent were computed by use of a seven-parameter log-linear regression model that uses variables of time, discharge, and seasonality. Concentration of total nitrogen ranged from less than 0.14 to 3.41 mg/L (milligrams per liter), with both extreme values occurring at the Rappahannock River. Concentration of total Kjeldahl nitrogen ranged from less than 0.1 mg/L in the James, Rappahannock, and Appomattox Rivers to 3.0 mg/L in the James River. Organic nitrogen was the predominant form of nitrogen at all stations except the Rappahannock River, where nitrite plus-nitrate nitrogen was predominant, and organic nitrogen comprised the majority of the measured total Kjeldahl nitrogen at all stations, ranging from 0.01 mg/L in the Appomattox River to 2.86 mg/L in the James River. Concentration of dissolved ammonia nitrogen ranged from 0.01 mg/L in the Pamunkey River to 0.54 mg/L at the James River. Concentration of nitrite-plusnitrate nitrogen ranged from 0.02 to 1.05 mg/L in the James River. Concentrations of total phosphorus ranged from less than 0.01 mg/L in the Rappahannock and the Mattaponi Rivers to 1.4 mg/L in the James River. Dissolved orthophosphorus ranged from less than 0.01 mg/L in all five rivers to 0.51 mg/L in the James River. Total suspended solids ranged from a concentration of less than 1 mg/L in all five rivers to 844 mg/L in the Rappahannock River. Total organic carbon ranged from 1.1 mg/L in the Appomattox River to 110 mg/L in the Rappahannock River. Dissolved silica ranged from 2.4 mg/L in the James River to 18 mg/L in the Appomattox River. The James and Rappahannock Rivers had high median concentrations and large ranges in concentrations for most constituents, probably because of a greater number of point and nonpoint sources of nutrients and suspended solids, and differences in land use when compared with the other basins. A significantly higher median concentration and greater range of dissolved orthophosphorus generally occurred at the James River than in all other rivers, which primarily is due to the greater number of point sources, such as municipal waste-water treatment plants. The Rappahannock River had significantly higher median concentrations and greater ranges of dissolved nitrite-plus-nitrate nitrogen and total nitrogen than other rivers, probably derived from agricultural sources. Total organic carbon was highest in the Mattaponi and Pamunkey River Basins that contain expanses of wetlands. The Appomattox River had the highest concentration of dissolved silica. The median monthly load of total nitrogen ranged from 16,500 kg (kilogram) in the Mattaponi River to 371,000 kg in the James River. Total Kjeldahl nitrogen ranged from a median monthly load of 12,500 kg in the Mattaponi River to 205,500 kg, also in the James River. Organic nitrogen comprised the majority of the total Kjeldahl nitrogen load in all five rivers, ranging from a median monthly load of 11,251 kg in the Mattaponi River to 3,299,500 kg in the James River. The median monthly load of dissolved ammonia nitrogen was 1,130 kg in the Mattaponi River and was as much as 21,050 kg in the James River, whereas nitrite-plus-nitrate nitrogen ranged from a median monthly load of 4,065 kg in the Mattaponi River to 156,500 kg in the James River. The median monthly load of total phosphorus ranged from 1,670 kg in the Mattaponi River to 61,600 kg in the James River, whereas the median monthly load of dissolved orthophosphorus ranged from 350 kg in the Mattaponi River to 25,900 kg in the James River. Total suspended solids ranged from a median monthly load of 241,500 kg in the Mattaponi River to 20,050,000 kg in the James River. Total organic carbon ranged from a median monthly load of 167,000 kg in the Mattaponi River to 2,100,000 kg in the James River. The median monthly load of dissolved silica ranged from 209,500 kg in the Mattaponi River to 3,625,000 kg in the James River. In general, annual loads for complete years of data collection were greatest at the James River for all constituents, probably because of the much higher discharge, greater basin size, and higher rates of runoff. Yields, or computations of loads per square mile of basin area, were generally highest at the Rappahannock River for total suspended solids, total Kjeldahl nitrogen, nitrite-plusnitrate nitrogen, and total nitrogen. Dissolved orthophosphorus was the only constituent with a yield consistently greater at the James River. Yields of total phosphorus were highest for the James and Rappahannock River basins, whereas yields of dissolved ammonia nitrogen, total organic carbon, and dissolved silica were similar for all five river basins. Quality-assurance analyses that compare the results of the Virginia Division of Consolidated Laboratory Services and the U.S. Geological Survey Laboratory indicate that there are statistically significant differences between the laboratories for several constituents. Differences between laboratories were found to be caused by differences in analytical reporting limits, differences in analytical technique, or a slight bias at both laboratories. Quality-assurance data were used to address analytical technique problems, and to qualify final concentrations and loads.

Virginia↗

USGS2013

LANDFIRE 2010 - updated data to support wildfire and ecological management

Wildfire is a global phenomenon that affects human populations and ecosystems. Wildfire effects occur at local to global scales impacting many people in different ways (Figure 1). Ecological concerns due to land use, fragmentation, and climate change impact natural resource use, allocation, and conservation. Access to consistent and current environmental data is a constant challenge, yet necessary for understanding the complexities of wildfire and ecological management. Data products and tools from the LANDFIRE Program help decision-makers to clarify problems and identify possible solutions when managing fires and natural resources. LANDFIRE supports the reduction of risk from wildfire to human lives and property, monitoring of fire danger, prediction of fire behavior on active incidents, and assessment of fire severity and impacts on natural systems [1] [2] [3]. LANDFIRE products are unique in that they are nationally consistent and provide the only complete geospatial dataset describing vegetation and wildland fuel information for the entire U.S. As such, LANDFIRE data are useful for many ecological applications [3]. For example, LANDFIRE data were recently integrated into a decision-support system for resource management and conservation decision-making along the Appalachian Trail. LANDFIRE is a joint effort between the U.S. Department of the Interior Office of Wildland Fire, U.S. Department of Agriculture Forest Service Fire & Aviation Management, and The Nature Conservancy. To date, seven versions of LANDFIRE data have been released, with each successive version improving the quality of the data, adding additional features, and/or updating the time period represented by the data. The latest version, LANDFIRE 2010 (LF 2010), released mid-2013, represents circa 2010 landscape conditions and succeeds LANDFIRE 2008 (LF 2008), which represented circa 2008 landscape conditions. LF 2010 used many of the same processes developed for the LF 2008 effort [3]. Ongoing refinement of the LANDFIRE vegetation and fuel data is necessary to improve the quality and usability of the data and to capture landscape disturbance. LANDFIRE relies on Landsat multi-spectral imagery to produce and update vegetation and fuel data. The deep Landsat archive provides data needed for vegetation classification, change analysis, and historical disturbance characterization, for which LANDFIRE has used more than 24,000 image scenes since the program’s inception. In addition, LF 2010 used airborne and spaceborne lidar, and spaceborne synthetic aperture radar (SAR) to map vegetation structure in areas where ground-based field information was lacking, including Alaska and U.S.-affiliated islands in the Caribbean and the Pacific. The mapping of insular areas is new for the 2010 data release; previous versions of LANDFIRE were limited to the conterminous U.S., Alaska, and Hawaii.

Earthzine↗

USGS2015

Development of an assessment tool for agricultural best management practice implementation in the Great Lakes Restoration Initiative priority watersheds—Upper East River, tributary to Green Bay, Wisconsin

Wisconsin↗

USGS2015

Quantifying stream thermal regimes at management-pertinent scales: combining thermal infrared and stationary stream temperature data in a novel modeling framework.

Accurately quantifying stream thermal regimes can be challenging because stream temperatures are often spatially and temporally heterogeneous. In this study, we present a novel modeling framework that combines stream temperature data sets that are continuous in either space or time. Specifically, we merged the fine spatial resolution of thermal infrared (TIR) imagery with hourly data from 10 stationary temperature loggers in a 100 km portion of the Big Hole River, MT, USA. This combination allowed us to estimate summer thermal conditions at a relatively fine spatial resolution (every 100 m of stream length) over a large extent of stream (100 km of stream) during during the warmest part of the summer. Rigorous evaluation, including internal validation, external validation with spatially continuous instream temperature measurements collected from a Langrangian frame of reference, and sensitivity analyses, suggests the model was capable of accurately estimating longitudinal patterns in summer stream temperatures for this system Results revealed considerable spatial and temporal heterogeneity in summer stream temperatures and highlighted the value of assessing thermal regimes at relatively fine spatial and temporal scales. Preserving spatial and temporal variability and structure in abiotic stream data provides a critical foundation for understanding the dynamic, multiscale habitat needs of mobile stream organisms. Similarly, enhanced understanding of spatial and temporal variation in dynamic water quality attributes, including temporal sequence and spatial arrangement, can guide strategic placement of monitoring equipment that will subsequently capture variation in environmental conditions directly pertinent to research and management objectives.

Montana↗

USGS2007

Vegetation classification, mapping, and monitoring at Voyageurs National Park, Minnesota: An application of the U.S. National Vegetation Classification

Question: How can the U.S. National Vegetation Classification (USNVC) serve as an effective tool for classifying and mapping vegetation, and inform assessments and monitoring? Location: Voyageurs National Park, northern Minnesota, U.S.A and environs. The park contains 54 243 ha of terrestrial habitat in the sub-boreal region of North America. Methods: We classified and mapped the natural vegetation using the USNVC, with 'alliance' and 'association' as base units. We compiled 259 classification plots and 1251 accuracy assessment test plots. Both plot and type ordinations were used to analyse vegetation and environmental patterns. Color infrared aerial photography (1:15840 scale) was used for mapping. Polygons were manually drawn, then transferred into digital form. Classification and mapping products are stored in publicly available databases. Past fire and logging events were used to assess distribution of forest types. Results and Discussion: Ordination and cluster analyses confirmed 49 associations and 42 alliances, with three associations ranked as globally vulnerable to extirpation. Ordination provided a useful summary of vegetation and ecological gradients. Overall map accuracy was 82.4%. Pinus banksiana - Picea mariana forests were less frequent in areas unburned since the 1930s. Conclusion: The USNVC provides a consistent ecological tool for summarizing and mapping vegetation. The products provide a baseline for assessing forests and wetlands, including fire management. The standardized classification and map units provide local to continental perspectives on park resources through linkages to state, provincial, and national classifications in the U.S. and Canada, and to NatureServe's Ecological Systems classification. IAVS; Opulus Press.

Minnesota↗

USGS2002

Possible sources of nitrate in ground water at swine licensed-managed feeding operations in Oklahoma, 2001

Samples collected and analyzed by the Oklahoma Department of Agriculture, Food, and Forestry from 1999 to 2001 determined that nitrate exceeded the U.S. Environmental Protection Agency maximum contaminant level for public drinking-water supplies of 10 milligrams per liter as nitrogen in 79 monitoring wells at 35 swine licensed-managed feeding operations (LMFO) in Oklahoma. The LMFOs are located in rural agricultural settings where long-term agriculture has potentially affected the ground-water quality in some areas. Land use prior to the construction of the LMFOs was assessed to evaluate the types of agricultural land use within a 500-meter radius of the sampled wells. Chemical and microbiological techniques were used to determine the possible sources of nitrate in water sampled from 10 wastewater lagoons and 79 wells. Samples were analyzed for dissolved major ions, dissolved trace elements, dissolved nutrients, nitrogen isotope ratios of nitrate and ammonia, wastewater organic compounds, and fecal coliform bacteria. Bacteria ribotyping analysis was done on selected samples to identify possible specific animal sources. A decision process was developed to identify the possible sources of nitrate. First, nitrogen isotope ratios were used to define sources as animal, mixed animal and fertilizer, or fertilizer. Second, wastewater organic compound detections, nitrogen-isotope ratios, fecal coliform bacteria detections, and ribotyping were used to refine the identification of possible sources as LFMO waste, fertilizer, or unidentified animal or mixtures of these sources. Additional evidence provided by ribotyping and wastewater organic compound data can, in some cases, specifically indicate the animal source. Detections of three or more wastewater organic compounds that are indicators of animal sources and detections of fecal coliform bacteria provided additional evidence of an animal source. LMFO waste was designated as a possible source of nitrate in water from 10 wells. The source of waste in water from five of those wells was determined through ribotyping, and the source of waste in water from the remaining five wells was determined by detections of three or more animal-waste compounds in the well samples. LMFO waste in the water from wells with unidentified animal source of nitrate does not indicate that LMFO waste was not the source, but indicated that multiple animal sources, including LMFO waste, may be the source of the nitrate.

Water-Resources Investigations Report↗

USGS2013

Vegetation classification and mapping, Vicksburg National Military Park, Mississippi

Executive Summary The National Park Service (NPS) Gulf Coast Inventory and Monitoring Network, with the support of the National Park Service Vegetation Inventory completed vegetation classification and mapping for Vicksburg National Military Park (VICK), in Warren County, Mississippi, from 2004 to 2010. VICK is one of more than 250 NPS units to be covered by the Vegetation Inventory. Methods and procedures follow those of the NPS Vegetation Inventory as of August, 2012 ( http://science.nature.nps.gov/im/inventory/veg/index.cfm ). Ecologists collected floristic and environmental data from 45 vegetation field plots and classified and described 13 plant community types corresponding to US National Vegetation Classification (USNVC) associations from these data. This classification was used to map 712 hectares (1,698 acres) of Vicksburg National Military Park, in ten map classes corresponding to vegetation associations and two non-vegetated land cover classes, from a digital orthomosaic created from 1:24,000 color infrared aerial photographs and digital elevation model (DEM) data. Methods used to delineate stands varied according to vegetation type and were a combination of incorporating stand boundaries from an existing map, new “heads-up” interpretation and modeling of digital environmental spatial data. A thematic accuracy assessment collected vegetation data from 118 field observations stratified across the vegetation classes. The overall accuracy of the vegetation map was estimated to be 60.5% at the thematic level of USNVC association and 92.4% at the thematic level of USNVC group. Estimates of areas of vegetation types, as adjusted for mapping error, were calculated for all types mapped and/or observed during the thematic accuracy assessment. An important finding of this study is that the composition of the forests of VICK is substantially different from that described by earlier, more qualitative, accounts. Implications of these findings and possible applications of the data for resource monitoring and management are presented. This report summarizes the methods and general results of the Vegetation Inventory for Vicksburg National Military Park. Appendices include descriptions of vegetation types, a field key to the types, a list of plant species, and accuracy assessment contingency tables. This report is supplemented by the project data, which include: spatial database containing map polygon attributes. Geospatial products are in Universal Transverse Mercator (UTM) projection, Zone 15, using the North American Datum of 1983. all field data (plot, observation point, and accuracy assessment point) stored in a Microsoft Access database metadata for all digital products The data and reports produced by this investigation reside at: https://irma.nps.gov/App/ and/or at: http://biology.usgs.gov/npsveg/

Mississippi↗

USGS2026

Experimental lure design reveals the best attractants for increasing detection of multiple mesocarnivores

Many mesocarnivores have low detection rates that hinder practitioners' abilities to implement effective monitoring strategies. Using olfactory attractants (i.e. lures) may increase detection rates, but variation in effects among species is not well understood. Thus, investigating factors influencing detection of mesocarnivores, can inform and improve monitoring efforts. We evaluated the effects of lures and environmental covariates on the detection of plains spotted skunks Spilogale interrupta , striped skunks Mephitis mephitis , northern raccoons Procyon lotor , gray foxes Urocyon cinereoargenteus , coyotes Canis latrans , bobcats Lynx rufus and Virginia opossums Didelphis virginiana . We conducted surveys during January–May 2023 in southeast Oklahoma using motion-triggered cameras at randomly selected sites. We surveyed sites using a 4-camera cluster and leave-one-out lure design, where 3 cameras were randomly assigned 1 of 4 lures (i.e. skunk-based lure, fatty acid tablets, sweet lure or sardines) and 1 camera was a control (i.e. no lure). We analyzed species-specific detection data within an occupancy framework to determine the influence of lure combinations and environmental covariates (i.e. temperature, precipitation and moon illumination) on site-level detection patterns for each species. When lures influenced detection, we assessed species-specific preference among lures (and the control) within sites by comparing camera-level independent detections with Kruskal–Wallis and Dunn's tests at sites where the species was detected. The effect of lures varied among species; lure combinations influenced site-specific daily detection of plains spotted skunks, striped skunks, gray foxes, raccoons and bobcats, but did not affect detection of coyotes or opossums. One environmental covariate influenced detection of striped skunks (i.e. moon illumination), bobcats (i.e. temperature), and gray foxes (i.e. precipitation). Within sites, lure preference varied among species. Spotted skunks, gray foxes and raccoons preferred sardines whereas striped skunks preferred the skunk-based lure. Identifying lure preferences and effects of environmental factors can help optimize sampling and improve mesocarnivore monitoring efforts.

Oklahoma↗

USGS2014

Ecological risks of shale oil and gas development to wildlife, aquatic resources and their habitats

Technological advances in hydraulic fracturing and horizontal drilling have led to the exploration and exploitation of shale oil and gas both nationally and internationally. Extensive development of shale resources has occurred within the United States over the past decade, yet full build out is not expected to occur for years. Moreover, countries across the globe have large shale resources and are beginning to explore extraction of these resources. Extraction of shale resources is a multistep process that includes site identification, well pad and infrastructure development, well drilling, high-volume hydraulic fracturing and production; each with its own propensity to affect associated ecosystems. Some potential effects, for example from well pad, road and pipeline development, will likely be similar to other anthropogenic activities like conventional gas drilling, land clearing, exurban and agricultural development and surface mining (e.g., habitat fragmentation and sedimentation). Therefore, we can use the large body of literature available on the ecological effects of these activities to estimate potential effects from shale development on nearby ecosystems. However, other effects, such as accidental release of wastewaters, are novel to the shale gas extraction process making it harder to predict potential outcomes. Here, we review current knowledge of the effects of high-volume hydraulic fracturing coupled with horizontal drilling on terrestrial and aquatic ecosystems in the contiguous United States, an area that includes 20 shale plays many of which have experienced extensive development over the past decade. We conclude that species and habitats most at risk are ones where there is an extensive overlap between a species range or habitat type and one of the shale plays (leading to high vulnerability) coupled with intrinsic characteristics such as limited range, small population size, specialized habitat requirements, and high sensitivity to disturbance. Examples include core forest habitat and forest specialists, sagebrush habitat and specialists, vernal pond inhabitants and stream biota. We suggest five general areas of research and monitoring that could aid in development of effective guidelines and policies to minimize negative impacts and protect vulnerable species and ecosystems: (1) spatial analyses, (2) species-based modeling, (3) vulnerability assessments, (4) ecoregional assessments, and (5) threshold and toxicity evaluations.

Environmental Science & Technology↗

USGS2013

Hydrogeologic framework, hydrology, and water quality in the Pearce Creek Dredge Material Containment Area and vicinity, Cecil County, Maryland, 2010-11

In 2009, to support an evaluation of the feasibility of reopening the Pearce Creek Dredge Material Containment Area (DMCA) in Cecil County, Maryland, for dredge-spoil disposal, the U.S. Geological Survey (USGS) began to implement a comprehensive study designed to improve the understanding of the hydrogeologic framework, hydrology, and water quality of shallow aquifers underlying the DMCA and adjacent communities, to determine whether or not the DMCA affected groundwater quality, and to assess whether or not groundwater samples contained chemical constituents at levels greater than maximum allowable or recommended levels established by the U.S. Environmental Protection Agency Safe Drinking Water Act. The study, conducted in 2010-11 by USGS in cooperation with the U.S. Army Corps of Engineers, included installation of observation wells in areas where data gaps led earlier studies to be inconclusive. The data from new wells and existing monitoring locations were interpreted and show the DMCA influences the groundwater flow and quality. Groundwater flow in the two primary aquifers used for local supplies-the Magothy aquifer and upper Patapsco aquifer (shallow water-bearing zone)-is radially outward from the DMCA toward discharge areas, including West View Shores, the Elk River, and Pearce Creek Lake. In addition to horizontal flow outward from the DMCA, vertical gradients primarily are downward in most of the study area, and upward near the Elk River on the north side of the DMCA property, and the western part of West View Shores. Integrating groundwater geochemistry data in the analysis, the influence of the DMCA is not only a source of elevated concentrations of dissolved solids but also a geochemical driver of redox processes that enhances the mobilization and transport of redox-sensitive metals and nutrients. Groundwater affected by the DMCA is in the Magothy aquifer and upper Patapsco aquifer (shallow water-bearing zone). Based on minimal data, the water quality in the upper Patapsco aquifer deep water-bearing zone does not seem to have been impacted by the DMCA.

Maryl↗

USGS2022

Seasonal and long-term clarity trend assessment of Lake Tahoe, California–Nevada

The clarity of Lake Tahoe, observed using a Secchi disk on a regular basis since the late 1960s, continues to be a sentinel metric of lake health. Water clarity is influenced by physical and biological processes and has declined in the five decades of monitoring, revealing differences between summer (June–September) and winter (December–March). This document summarizes key findings of a study of Lake Tahoe water clarity, including long-term variability and the relative importance of several influencing variables and processes. This study, prepared in cooperation with the Nevada Division of Environmental Protection, focused on (1) an apparent divergence in clarity trends between summer and winter periods, (2) observed changes in in-lake physical and ecological variables that may influence or control seasonal and annual clarity trends, and (3) five research hypotheses regarding lake clarity that were developed by Lake Tahoe management agencies. Previously collected data were used to complete this study. Trend analysis confirmed that winter clarity stabilized (that is, there is no longer a statistically significant trend up or down) during the last 20 years. Evaluation of clarity for selected months in the 50-year Secchi disk clarity dataset showed that only two summer months, July and August, had statistically significant decreases in clarity from 2000–19. Different subsets of available data were analyzed to reveal the presence or absences of trends for each season, decade, and month. Five hypotheses related to lake clarity were part of the study described by this report. Hypothesis 1 stated that clarity is controlled predominantly by the distribution and volumetric density of fine particles in suspension. This hypothesis was studied using available data describing in-lake fine (0–20 micrometers) particles from 2008–19. Water clarity was negatively correlated with in-lake particle abundance, with particles in the 1.0-4.6 μm range having the greatest effect, consistent with light-scattering theory. Estimated abundances of diatoms of the genus Cyclotella also were found to be negatively correlated with clarity. Data limitations precluded a complete investigation of hypothesis 2, which stated that the observed improvements in winter water clarity are a response to decreasing fine suspended-sediment concentrations in the lake resulting from load reductions from upland sources in and near urbanized areas. Data describing fine-sediment loading from urban areas to the lake were only available since 2014, and only once or twice per month. A slight, statistically significant, negative correlation was identified between urban fine-particle loading and monthly lake clarity with a 4-month lag. Particle abundance in monitored streams is highly correlated with simultaneous particle abundance in the lake. Hypothesis 3 stated that changing hydrodynamic conditions in the lake are increasing thermal stability and resistance to mixing. Trend analyses performed on stability index and buoyancy frequency time series computed from long-term observations of lake temperatures support the hypothesis that hydrodynamic conditions have evolved since 1969 to increase the lake’s resistance to mixing. The date of maximum mixing in winter has become progressively earlier in the year. Lake density stratification, defined using the stability index, is commencing earlier in the year and extending a month longer than in the early years of the monitoring program. Hypothesis 4 stated that the trend of decreasing summer clarity is a result of earlier, prolonged, and more intense stratification. Statistically significant correlations were found between summer clarity and (1) date of onset of stratification, (2) duration of stratification, and (3) buoyancy frequency. Hypothesis 5 stated that ecological (food web) interactions are causing changes in the trends of seasonal or annual clarity; data supporting hypothesis 5 were limited to examples from other systems and to intermittent monitoring of Lake Tahoe and Emerald Bay. The resulting narrative assessment was motivated by a 6-year study of Mysis shrimp disappearance and return in Emerald Bay. The available data and a large body of published literature are consistent with the inference that Mysis shrimp-induced food web changes are causing changes in the trends of seasonal or annual clarity. This food-web study focused on the relations between introduced Mysis shrimp, the native cladocerans ( Daphnia and Bosmina ) that were largely eliminated following Mysis introduction, and the effect on fine particles within the lake. The records of Mysis and other zooplankton data for Lake Tahoe are episodic and have large gaps. Consequently, statistical analyses could not be conducted to compare zooplankton data with other variables. The long-term record, however, indicates that the key effect was a change to the phytoplankton assemblage, where larger diatoms disappeared, likely due to Mysis grazing, only to be replaced by Cyclotella that are an order-of-magnitude smaller and have increased the abundance and volumetric density of total fine particles in suspension (biotic and abiotic).

California↗

USGS2000

Ground-water conditions in Georgia, 1999

Ground-water conditions in Georgia during 1999 and for the period of record were evaluated using data from U.S. Geological Survey ground-water-level and ground-water-quality monitoring networks. Data for 1999 included in this report are from continuous water-level records from 130 wells and chloride analyses from 14 wells. Data from one well is incomplete because data collection was discontinued. Chloride concentration in water from the Upper Floridan aquifer in most of coastal Georgia was within drinking-water standards established by the Georgia Department of Natural Resources and the U.S. Environmental Protection Agency. In the Savannah area, chloride concentration has not changed appreciably with time. However, chloride concentration in water from some wells that tap the Floridan aquifer system in the Brunswick area exceeds the drinking-water standards. Ground-water-level and ground-water-quality data are essential for water assessment and management. Ground-water-level fluctuations and trends can be used to estimate changes in aquifer storage resulting from the effects of ground-water withdrawal and recharge from precipitation. These data can be used to address water-management needs and to evaluate the effects of management and conservation programs. As part of the ground-water investigations conducted by the U.S. Geological Survey (USGS), in cooperation with the State of Georgia and city and county governments, a Statewide water-level-measurement program was started in 1938. Initially, this program consisted of an observation-well network in the coastal area of Georgia to monitor variations in ground-water storage and quality. Additional wells were later included in areas where data could be used to aid in water resources development and management. During 1999, periodic water-level measurements were made in 46 wells, and continuous water-level measurements were obtained from 165 wells. Continuous water-level records were obtained using analog (pen and chart) recorders and electronic data recorders that record the water level at 60-minute intervals. For wells having incomplete water-level record, water levels during periods of missing record may have been higher or lower than recorded water levels. Water samples collected from 85 wells during May, June, July, August, September, October, November, and December 1999 were analyzed to determine chloride concentration in the Savannah and Brunswick areas.

Georgia↗

USGS2026

Assessment of natural gas pipeline construction on stream temperature and turbidity in southwestern Virginia, 2017–25

Despite the extensive natural gas pipeline network in the United States that intersects streams and other sensitive habitats, few case studies use a comparative upstream-to-downstream approach to evaluate potential short- and long-term effects of pipeline stream crossings from pre-construction through post-restoration. In 2017, the U.S. Geological Survey, in cooperation with the Virginia Department of Environmental Quality, deployed real-time continuous stream monitoring stations upstream and downstream from six proposed Mountain Valley Pipeline stream crossings in southwestern Virginia. Water temperature and turbidity data collected at the upstream and downstream sites were compared across three periods—before stream crossing construction, during stream crossing construction, and after stream crossing construction—to determine potential influences from the pipeline stream crossing. Additionally, the monitoring network was used to notify regulators of potentially anomalous conditions throughout the entire monitoring period. The results of this study indicate that pipeline stream crossing did not affect long-term or short-term upstream-to-downstream water temperature conditions or long-term upstream-to-downstream turbidity conditions in any of the six monitored streams. Some short-term anomalously elevated turbidity conditions were observed and attributable to pipeline stream crossing; however, the magnitudes and durations were not sufficient to alter the long-term turbidity regimes of the streams in which they were observed. The application of the monitoring network as a real-time alert system successfully alerted regulators to potentially anomalous conditions.

Virginia↗

USGS2007

Beach morphology monitoring in the Columbia River Littoral Cell: 1997-2005

This report describes methods used, data collected, and results of the Beach Morphology Monitoring Program in the Columbia River Littoral Cell (CRLC) from 1997 to 2005. A collaborative group primarily consisting of the US Geological Survey and the Washington State Department of Ecology performed this work. Beach Monitoring efforts consisted of collecting topographic and bathymetric horizontal and vertical position data using a Real Time Kinematic Differential Global Positioning System (RTK-DGPS). Sediment size distribution data was also collected as part of this effort. The monitoring program was designed to: 1) quantify the short- to medium-term (seasonal to interannual) beach change rates and morphological variability along the CRLC and assess the processes responsible for these changes; 2) collect beach state data (i.e., grain size, beach slope, and dune/sandbar height/position) to enhance the conceptual understanding of CRLC functioning and refine predictions of future coastal change and hazards; 3) compare and contrast the scales of environmental forcing and beach morphodynamics in the CRLC to other coastlines of the world; and 4) provide beach change data in a useful format to land use managers.

Oregon, Washington↗

USGS2019

Hydrologic site assessment for passive treatment of groundwater nitrogen with permeable reactive barriers, Cape Cod, Massachusetts

Wastewater disposal associated with rapid population growth and development on Cape Cod, Massachusetts, during the past several decades has resulted in widespread contamination of groundwater with nitrogen. As a result, water quality in many of the streams, lakes, and coastal embayments on Cape Cod is impaired by excess nitrogen. To reduce nitrogen loads to these impaired water bodies, watershed-based planning is currently [2019] underway following a regional strategy, the section 208 areawide water-quality management plan update for Cape Cod. In the updated plan, traditional (sewering) and alternative wastewater management options are under consideration for restoring water quality in impaired surface-water bodies. Permeable reactive barriers, which are reactive zones emplaced below the water table for passive treatment of groundwater contaminants, are one of the alternatives being considered by Cape Cod towns as a potentially cost-effective technology for the removal of nitrogen from groundwater. However, the effectiveness of permeable reactive barriers depends on local conditions, and site-specific hydrologic and water-quality data are needed to inform the decision to install a permeable reactive barrier in a given location. These data are not available in most locations on Cape Cod; consequently, site assessments are needed before selecting this treatment option. To address this need, the U.S. Environmental Protection Agency, U.S. Geological Survey, and Cape Cod Commission formed a technical team in 2015 to develop and evaluate a hydrologic site-assessment approach for permeable reactive barrier installation. The approach developed by the technical team includes a preliminary regional assessment followed by a phased onsite investigation. The approach was intended to provide the hydrologic data needed to make informed decisions on site suitability and to support installation and monitoring should the site be deemed appropriate for a permeable reactive barrier. The factors that were evaluated to characterize local hydrologic conditions and inform site selection included groundwater flow directions and rates, depth to the water table, hydraulic conductivity and degree of heterogeneity of the aquifer, spatial distribution and concentration of nitrate and oxidation-reduction-sensitive constituents, thickness and depth of the treatment zone, distance to downgradient water bodies, and access for drilling and permeable reactive barrier installation. The approach was demonstrated on Cape Cod by conducting a preliminary assessment of 27 sites, from which 5 sites were selected for onsite investigations. Results indicated that the site-assessment approach was successful for screening sites and characterizing the geologic, hydrologic, and water-quality conditions at the sites selected for onsite investigations. Overall, the phased assessment evaluated in this study provided an efficient means of obtaining the hydrologic information needed to determine if a site was suitable for permeable reactive barrier installation on Cape Cod for the passive treatment of nitrogen in groundwater.

Massachusetts↗

USGS2003

Clinical disease and laboratory abnormalities in free-ranging desert tortoises in California (1990-1995)

Desert tortoise ( Gopherus agassizii ) populations have experienced precipitous declines resulting from the cumulative impact of habitat loss and human and disease-related mortality. Diagnosis of disease in live, free-ranging tortoises is facilitated by evaluation of clinical signs and laboratory test results but may be complicated by seasonal and environmental effects. The goals of this study were: 1) to describe and monitor clinical and laboratory signs of disease in adult, free-ranging desert tortoises at three sites in the Mojave Desert of California (USA) between October 1990 and October 1995; 2) to evaluate associations between clinical signs and hematologic, biochemical, serologic, and microbiologic test results; 3) to characterize disease patterns by site, season, and sex; and 4) to assess the utility of diagnostic tests in predicting morbidity and mortality. Venous blood samples were obtained four times per year from tortoises of both sexes at the Desert Tortoise Research Natural Area (DTNA), Goffs/Fenner Valley, and Ivanpah Valley. Tortoises were given a physical examination, and clinical abnormalities were graded by type and severity. Of 108 tortoises, 68.5% had clinical signs of upper respiratory tract disease consistent with mycoplasmosis at least once during the study period. In addition, 48.1% developed moderate to severe shell lesions consistent with cutaneous dyskeratosis. Ulcerated or plaque-like oral lesions were noted on single occasions in 23% of tortoises at Goffs and 6% of tortoises at Ivanpah. Tortoises with oral lesions were significantly more likely than tortoises without lesions to have positive nasal cultures for Mycoplasma agassizii ( P =0.001) and to be dehydrated ( P =0.0007). Nine tortoises had marked azotemia (blood urea nitrogen [BUN] >100 mg/dl) or persistent azotemia (BUN 63–76 mg/dl); four of these died, three of which had necropsy confirmation of urinary tract disease. Laboratory tests had low sensitivity but high specificity in assessing morbidity and mortality; there was marked discrepancy between serologic and culture results for M. agassizii . Compared with tortoises at other sites, tortoises at DTNA were more likely to be seropositive for M. agassizii . Tortoises at Goffs were significantly more likely to have moderate to severe shell disease, oral lesions, positive nasal cultures for M. agassizii , and increased plasma aspartate aminotransferase activity. The severe disease prevalence in Goffs tortoises likely contributed to the population decline that occurred during and subsequent to this study.

Journal of Wildlife Diseases↗