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At least 721 records · Page 40Linked to original sources

USGS2007

Detection of viral hemorrhagic septicemia in round gobies in New York State (USA) waters of Lake Ontario and the St. Lawrence River

In May 2006 a large mortality of several thousand round gobies Neogobius melanostomus (Pallas, 1814) occurred in New York waters of the St. Lawrence River and Lake Ontario. Necropsies of sampled fish from these areas showed pallor of the liver and gills, and hemorrhagic areas in many organs. Histopathologic examination of affected tissues revealed areas of necrosis and hemorrhage. Inoculations of fathead minnow Pimephales promelas (Rafinesque, 1820) cell cultures with dilutions of tissue samples from the necropsied gobies produced a cytopathic effect within 5 d post-inoculation. Samples of cell culture supernatant were tested using RT-PCR and confirmed the presence of viral hemorrhagic septicemia virus (VHSV). Sequence analysis of the VHSV isolate resulted in its assignment to the type-IVb subgroup. The detection of VHSV in a relatively recent invasive fish species in the Great Lakes and the potential impact of VHSV on the ecology and economy of the area will require further investigation and careful management considerations. Inter-Research 2007.

New York↗

USGS2019

Riverscape correlates for distribution of threatened spotfin chub Erimonax monachus in the Tennessee River Basin, USA

Globally, aquatic biodiversity is imperiled at an increasing rate, especially in diversity hotspots such as the southeastern USA. The spotfin chub Erimonax monachus is a federally threatened minnow with a disjunct distribution resulting from numerous impoundments on the Tennessee River and its tributaries in the heart of the southeastern USA. Recovery actions required to remove federal protection for E. monachus are dependent on the establishment of additional populations within the historical range of the species, but little is known regarding macroscale habitat requirements that could guide conservation planning. We analyzed local- and network-scale watershed attributes to develop an ecological niche model (ENM) for E. monachus useful for directing conservation actions at sampled and unsampled sites across the Tennessee River Basin. We found E. monachus occurred most often in larger streams with large upstream catchment areas and minimal alteration to forested uplands, but all of these sites were in close proximity to high densities of downstream dams due to populations being restricted to large-stream habitat upstream of reservoirs. The ENM showed the highest probability of E. monachus occurrence among catchment locations with known extant populations; however, additional historical and previously unoccupied catchments showed potential for successful (re)introductions, provided that fine-scale habitats are appropriate. Our framework can be used to identify potential survey and (re)introduction sites for E. monachus as well as other rare riverine fishes and represents a method for identifying areas of high priority for conserving aquatic biodiversity.

Alabama, Georgia, Kentucky, Mississippi, North Car↗

USGS2008

Integrated monitoring and information systems for managing aquatic invasive species in a changing climate

Changes in temperature, precipitation, and other climatic drivers and sea-level rise will affect populations of existing native and non-native aquatic species and the vulnerability of aquatic environments to new invasions. Monitoring surveys provide the foundation for assessing the combined effects of climate change and invasions by providing baseline biotic and environmental conditions, although the utility of a survey depends on whether the results are quantitative or qualitative, and other design considerations. The results from a variety of monitoring programs in the United States are available in integrated biological information systems, although many include only non-native species, not native species. Besides including natives, we suggest these systems could be improved through the development of standardized methods that capture habitat and physiological requirements and link regional and national biological databases into distributed Web portals that allow drawing information from multiple sources. Combining the outputs from these biological information systems with environmental data would allow the development of ecological-niche models that predict the potential distribution or abundance of native and non-native species on the basis of current environmental conditions. Environmental projections from climate models can be used in these niche models to project changes in species distributions or abundances under altered climatic conditions and to identify potential high-risk invaders. There are, however, a number of challenges, such as uncertainties associated with projections from climate and niche models and difficulty in integrating data with different temporal and spatial granularity. Even with these uncertainties, integration of biological and environmental information systems, niche models, and climate projections would improve management of aquatic ecosystems under the dual threats of biotic invasions and climate change

Conservation Biology↗

USGS2006

Chemical and ecological health of white sucker (Catostomus Commersoni) in Rock Creek Park, Washington, D.C., 2003?04

Several classes of chemicals that are known or suspected contaminants were found in bed sediment in Rock Creek, including polyaromatic hydrocarbons (PAHs), phthalate esters, organochlorine pesticides, dioxins and furans, trace metals and metalloids (mercury, arsenic, cadmium, chromium, cobalt, copper, lead, nickel, silver, and zinc), and polychlorinated biphenyls (total PCBs and selected aroclors). Concentrations of many of these chemicals consistently exceeded thresholdor chronic-effects guidelines for the protection of aquatic life and often exceeded probable effects levels (PELs). Exceedance of PELs was dependent on the amount of total organic carbon in the sediments. Concurrent with the collection of sediment-quality data, white sucker (Catostomus commersoni) were evaluated for gross-external and internal-organ anomalies, whole-body burdens of chemical contaminants, and gut contents to determine prey. The histopathology of internal tissues of white sucker was compared to contaminant levels in fish tissue and bed sediment. Gut contents were examined to determine preferential prey and thus potential pathways for the bioaccumulation of chemicals from bed sediments. Male and female fish were tested separately. Lesions and other necroses were observed in all fish collected during both years of sample collection, indicating that fish in Rock Creek have experienced some form of environmental stress. No direct cause and effect was determined for chemical exposure and compromised fish health, but a substantial weight of evidence indicates that white sucker, which are bottom-feeding fish and low-order consumers in Rock Creek, are experiencing some reduction in vitality, possibly due to immunosuppression. Abnormalities observed in gonads of both sexes of white sucker and observations of abnormal behavior during spawning indicated some interruption in reproductive success.

Scientific Investigations Report↗

USGS2022

Seasonal variability in macroinvertebrate assemblages in paired perennial and intermittent streams in Costa Rica

Ecological effects of flooding and drying events are relatively understudied in the Neotropics and less is known about these hydrological extremes in intermittent streams. Neotropical headwater streams in Costa Rica provide opportunities to evaluate the response of macroinvertebrate communities to seasonal changes in flow regime in relatively human undisturbed systems. We quantified the effects of seasonal flow variation on aquatic macroinvertebrate assemblages (i.e., density, richness, and functional traits) within two headwater streams with differing hydrological regimes (i.e., intermittent versus perennial), in the Pacific North of Costa Rica. We sampled macroinvertebrates monthly over a year in riffle and pool habitats. Non-metric multidimensional scaling (NMDS) analyses indicated differences in macroinvertebrate taxonomic richness and density between the two streams and riffle and pool habitats. We found that macroinvertebrates in the intermittent stream riffles had significantly higher richness during the dry season. We also found higher macroinvertebrate functional trait richness in the intermittent stream riffle habitats during the dry season. Our results may be explained by life history traits related to stream velocity preference or tolerance, short life cycles that limit exposure to disturbances, and dispersal capacities and feeding mechanisms that are dependent on water movement.

Hydrobiologia↗

USGS2022

Modeling risk dynamics of contaminants of emerging concern in a temperate-region wastewater effluent-dominated stream

Wastewater effluent-dominated streams are becoming increasingly common worldwide, including in temperate regions, with potential impacts on ecological systems and drinking water sources. We recently quantified the occurrence/spatiotemporal dynamics of pharmaceutical mixtures in a representative temperate-region wastewater effluent-dominated stream (Muddy Creek, Iowa) under baseflow conditions and characterized relevant fate processes. Herein, we quantified the ecological risk quotients (RQs) of 19 effluent-derived contaminants of emerging concern (CECs; including: 14 pharmaceuticals, 2 industrial chemicals, and 3 neonicotinoid insecticides) and 1 run-off-derived compound (atrazine) in the stream under baseflow conditions, and estimated the probabilistic risks of effluent-derived CECs under all-flow conditions ( i.e. , including runoff events) using stochastic risk modeling. We determined that 11 out of 20 CECs pose medium-to-high risks to local ecological systems ( i.e. , algae, invertebrates, fish) based on literature-derived acute effects under measured baseflow conditions. Stochastic risk modeling indicated decreased, but still problematic, risk of effluent-derived CECs ( i.e. , RQ ≥ 0.1) under all-flow conditions when runoff events were included. Dilution of effluent-derived chemicals from storm flows thus only minimally decreased risk to aquatic biota in the effluent-dominated stream. We also modeled in-stream transport. Thirteen out of 14 pharmaceuticals persisted along the stream reach (median attenuation rate constant k < 0.1 h −1 ) and entered the Iowa River at elevated concentrations. Predicted and measured concentrations in the drinking water treatment plant were below the human health benchmarks. This study demonstrates the application of probabilistic risk assessments for effluent-derived CECs in a representative effluent-dominated stream under variable flow conditions (when measurements are less practical) and provides an enhanced prediction tool transferable to other effluent-dominated systems.

Iowa↗

USGS2015

Oil-particle interactions and submergence from crude oil spills in marine and freshwater environments: review of the science and future research needs

Oil-particle interactions and oil submergence are of much interest to oil spill responders and scientists, especially as transportation of light and heavy crude oils increases in North America’s coastal marine and freshwater environments. This report contains an up-to-date review of the state of the science for oil-particle aggregates (OPAs), in terms of their formation and stability which may alter the transport, fate, and toxicity of the residual oil and, hence, its level of ecological risk. Operational considerations—detection, containment, and recovery—are discussed. Although much is known about oil-particle interactions in coastal marine environments, there remains a need for additional science on methods to detect and quantify the presence of OPAs and to understand their effects on containment and recovery of oil spilled under various temperature regimes and in different aquatic habitats including freshwater environments.

Open-File Report↗

USGS2006

Chemical and Ecological Health of White Sucker (Catostomus Commersoni) in Rock Creek Park, Washington, D.C., 2003-04

Several classes of chemicals that are known or suspected contaminants were found in bed sediment in Rock Creek, including polyaromatic hydrocarbons (PAHs), phthalate esters, organochlorine pesticides, dioxins and furans, trace metals and metalloids (mercury, arsenic, cadmium, chromium, cobalt, copper, lead, nickel, silver, and zinc), and polychlorinated biphenyls (total PCBs and selected aroclors). Concentrations of many of these chemicals consistently exceeded threshold or chronic-effects guidelines for the protection of aquatic life and often exceeded probable effects levels (PELs). Exceedance of PELs was dependent on the amount of total organic carbon in the sediments. Concurrent with the collection of sediment-quality data, white sucker (Catostomus commersoni) were evaluated for gross-external and internal-organ anomalies, whole-body burdens of chemical contaminants, and gut contents to determine prey. The histopathology of internal tissues of white sucker was compared to contaminant levels in fish tissue and bed sediment. Gut contents were examined to determine preferential prey and thus potential pathways for the bioaccumulation of chemicals from bed sediments. Male and female fish were tested separately. Lesions and other necroses were observed in all fish collected during both years of sample collection, indicating that fish in Rock Creek have experienced some form of environmental stress. No direct cause and effect was determined for chemical exposure and compromised fish health, but a substantial weight of evidence indicates that white sucker, which are bottom-feeding fish and low-order consumers in Rock Creek, are experiencing some reduction in vitality, possibly due to immunosuppression. Abnormalities observed in gonads of both sexes of white sucker and observations of abnormal behavior during spawning indicated some interruption in reproductive success.

Scientific Investigations Report↗

USGS2020

Bioaccumulation of the pesticide imidacloprid in stream organisms and sublethal effects on salamanders

Neonicotinoids are one of the most widely used classes of insecticides in the world. The neonicotinoid imidacloprid is commonly applied to hemlock ( Tsuga spp.) stands in eastern North America to reduce tree mortality from infestations of the invasive hemlock woolly adelgid (HWA; Adelges tsugae ). While laboratory and mesocosm studies have determined that imidacloprid can bioaccumulate in anurans and cause sublethal effects, no field studies have investigated whether salamanders or insects in streams adjacent to HWA treatments bioaccumulate imidacloprid or if sublethal effects are detectable in wild salamanders. We assessed relationships between imidacloprid exposure and stream salamander health in West Virginia, USA, using concentration of the stress hormone corticosterone and body condition indices (BCI) as response variables. Of 107 Desmognathus salamanders from 11 sites tested for bioaccumulation, we detected imidacloprid in 47 salamanders. Of 15 benthic macroinvertebrate samples tested, we detected imidacloprid, imidacloprid-urea, and imidacloprid-olefin in 15, 13, and 1 sample, respectively. Based on 115 Desmognathus salamanders sampled at 11 sites for stress hormone responses, corticosterone concentration increased with imidacloprid concentration in stream water. For 802 salamanders sampled at 48 sites, BCI decreased as concentration of imidacloprid in stream water increased, but explanatory power was low. Our study suggests that chronic leaching of imidacloprid from treated hemlock stands into adjacent streams has the potential to negatively affect aquatic organisms and may provide a route of exposure to higher trophic levels.

West Virginia↗

USGS1995

Isohaline position as a habitat indicator for estuarine populations

Populations of native and introduced aquatic organisms in the San Francisco Bay/Sacramento-San Joaquin Delta Estuary ("Bay/Delta") have undergone significant declines over the past two decades. Decreased river inflow due to drought and increased freshwater diversion have contributed to the decline of at least some populations. Effective management of the estuary's biological resources requires a sensitive indicator of the response to freshwater inflow that has ecological significance, can be measured accurately and easily, and could be used as a "policy" variable to set standards for managing freshwater inflow. Positioning of the 2% (grams of salt per kilogram of seawater) bottom salinity value along the axis of the estuary was examined for this purpose. The 2% bottom salinity position (denoted by X 2 ) has simple and significant statistical relationships with annual measures of many estuarine resources, including the supply of phytoplankton and phytoplankton-derived detritus from local production and river loading; benthic macroinvertebrates (molluscs); mysids and shrimp; larval fish survival; and the abundance of planktivorous, piscivorous, and bottom-foraging fish. The actual mechanisms are understood for only a few of these populations. X 2 also satisfies other recognized requirements for a habitat indicator and probably can be measured with greater accuracy and precision than alternative habitat indicators such as net freshwater inflow into the estuary. The 2% value may not have special ecological significance for other estuaries (in the Bay/Delta, it marks the locations of an estuarine turbidity maximum and peaks in the abundance of several estuarine organisms), but the concept of using near-bottom isohaline position as a habitat indicator should be widely applicable. Although X 2 is a sensitive index of the estuarine community's response to net freshwater inflow, other hydraulic features of the estuary also determine population abundances and resource levels. In particular, diversion of water for export from or consumption within the estuary can have a direct effect on population abundance independent of its effect on X 2 . The need to consider diversion, in addition to X 2 , for managing certain estuarine resources is illustrated using striped bass survival as an example. The striped bass survival data were also used to illustrate a related important point: incorporating additional explanatory variables may decrease the prediction error for a population or process, but it can increase the uncertainty in parameter estimates and management strategies based on these estimates. Even in cases where the uncertainty is currently too large to guide management decisions, an uncertainty analysis can identify the most practical direction for future data acquisition.

California↗

USGS1966

Contamination of the freshwater ecosystem by pesticides

A large part of our disquieting present-day pesticide problem is intimately tied to the freshwater ecosystem. Economic poisons are used in so many types of terrain to control so many kinds of organisms that almost all lakes and streams are likely to be contaminated. In addition to accidental contamination many pesticides are deliberately applied directly to fresh waters for suppression of aquatic animals or plants. The problem is intensified because of the extreme susceptibility of freshwater organisms. The complexity of freshwater environments and their variety makes it difficult to comprehend the total effect of pesticides.

Journal of Applied Ecology↗

USGS2023

Potential effects of climate change on Appalachian stoneflies ( Remenus kirchneri , Acroneuria kosztarabi , and Tallaperla lobata )

Plecoptera (stoneflies) are an order of insects where most species rely on clean, fast-moving freshwater for an aquatic larval stage followed by a short terrestrial adult stage. Most species of Plecoptera seem to be restricted to specific stream types and thermal regimes. Climate-driven changes are likely to alter stream temperatures and flow, resulting in physiological stress, reduced reproductive success, and possibly latitudinal or elevational distribution shifts. This report focuses on climate projections and the resulting ecological effect for three species of Appalachian stoneflies: Remenus kirchneri , Acroneuria kosztarabi , and Tallaperla lobata . Although species-specific information is sparse for these three species, climate studies for other Plecoptera spp. are applicable. In the focal region, temperature is increasing and likely leading to increased stream temperatures. In response, Plecoptera spp. will likely experience physiological stress from increasing metabolic rates and energy demands concurrent with changing food quality and access. Warming temperatures and decreased larval energy stores are likely to contribute to lower adult body size and longevity, thus decreasing reproductive success. Whereas projected changes to precipitation and runoff are less certain, under drier future climate projections, decreased streamflow may further stress larval Plecoptera. Remenus kirchneri , A. kosztarabi , and T. lobata will likely retain stable permanent stream habitats for the analyzed future (2006–99). Changing climate is of particular concern for mountaintop species R. kirchneri and T. lobata because they may be unable to track shifts in suitable climate and habitat.

North Carolina, Tennessee, Virginia↗

USGS2021

Non-native Pond Sliders cause long-term decline of native Sonora Mud Turtles: A 33-year before-after study in an undisturbed natural environment

Using a before-after study design in a stable, largely undisturbed pond habitat and a dataset spanning 33 years, we document and describe the decline of native Sonora mud turtles (Kinosternon sonoriense) after the introduction of non-native pond sliders (Trachemys scripta). The Sonora mud turtle population in Montezuma Well in central Arizona, USA, declined to less than 25% of previous numbers, from 372 ± 64 in 1983 to 80 ± 21 in 2011. We trapped and removed the non-native turtles between 2007 and 2012 and after removal of the non-natives, the Sonora mud turtle population increased to 139 ± 34 in 2015. The native turtles also significantly increased basking activity after removal of the non-natives, paralleling results of small-scale mesocosm studies showing that pond sliders negatively affect basking rates of native turtle species. Reproductive rates of female Sonora mud turtles (numbers of females with eggs) were lower during the period of peak non-native turtle abundance, and increased after removal of the non-native turtles. We hypothesize that the reduction in effective reproductive rate links interference competition (reflected in reduced basking rates) to the long-term decline of the native mud turtles. Results from the undisturbed natural system of Montezuma Well provide new insights on the overall occurrence, magnitude, and mechanisms of negative effects of introduced pond sliders on native turtle species. Sonora mud turtles are very different in their morphology, behavior, and ecology from pond sliders and from native turtles in other studies, suggesting that impacts of non-native pond sliders are more pervasive than previously thought.

Aquatic Invasions↗

USGS2014

Freshwater mussels of Florida

An exhaustive guide to all aspects of the freshwater mussel fauna in Florida, Freshwater Mussels of Florida covers the ecology, biology, distribution, and conservation of the many species of bivalve mollusks in the Sunshine State. In the past three decades, researchers, the public, businesses that depend on wildlife, and policy makers have given more attention to the threatened natural diversity of the Southeast, including freshwater mussels. This compendium meets the increasingly urgent need to catalog this imperiled group of aquatic organisms in the United States.

Florida↗

USGS2013

Ecological impacts of energy-wood harvests: Lessons from whole-tree harvesting and natural disturbance

Recent interest in using forest residues and small-diameter material for biofuels is generating a renewed focus on harvesting impacts and forest sustainability. The rich legacy of research from whole-tree harvesting studies can be examined in light of this interest. Although this research largely focused on consequences for forest productivity, in particular carbon and nutrient pools, it also has relevance for examining potential consequences for biodiversity and aquatic ecosystems. This review is framed within a context of contrasting ecosystem impacts from whole-tree harvesting because it represents a high level of biomass removal. Although whole-tree harvesting does not fully use the nonmerchantable biomass available, it indicates the likely direction and magnitude of impacts that can occur through energy-wood harvesting compared with less-intensive conventional harvesting and to dynamics associated with various natural disturbances. The intent of this comparison is to gauge the degree of departure of energy-wood harvesting from less intensive conventional harvesting. The review of the literature found a gradient of increasing departure in residual structural conditions that remained in the forest when conventional and whole-tree harvesting was compared with stand-replacing natural disturbance. Important stand- and landscape-level processes were related to these structural conditions. The consequence of this departure may be especially potent because future energy-wood harvests may more completely use a greater range of forest biomass at potentially shortened rotations, creating a great need for research that explores the largely unknown scale of disturbance that may apply to our forest ecosystems.

Journal of Forestry↗

USGS2007

Selected field parameters from streams and preliminary analytical data from water and macroinvertebrate samples, Central Colorado Assessment Project, task, 2004 and 2005

The U.S. Geological Survey (USGS) Central Colorado Assessment Project (CCAP) began in October 2003 and is planned to last through September 2008. One major goal of this project is to compare the relationships between surface-water chemistry and aquatic fauna in mined and unmined areas. To accomplish this goal, we are conducting a State-scale reconnaissance sampling program, in which we are collecting water and macroinvertebrate samples. Selected results from the first two years of project analyses are reported here. We plan to develop statistical models and use geographic information system (GIS) technology to quantify the relationships between ecological indicators of metal contamination in Rocky Mountain streams and water quality, landscape and land-use characteristics (for example, mine density, geology, geomorphology, vegetation, topography). Our research will test the hypothesis that physicochemical variables and ecological responses to metal concentrations in stream water in Rocky Mountain streams are ultimately determined largely by historical land uses.

Colorado↗

USGS2011

Crims Island-Restoration and monitoring of juvenile salmon rearing habitat in the Columbia River Estuary, Oregon, 2004-10

Under the 2004 Biological Opinion for operation of the Federal Columbia River Power System released by the National Marine Fisheries Service, the U.S. Army Corps of Engineers (USACE), the Bonneville Power Administration (BPA), and the Bureau of Reclamation (Reclamation) were directed to restore more than 4,047 hectares (10,000 acres) of tidal marsh in the Columbia River estuary by 2010. Restoration of Crims Island near Longview, Washington, restored 38.1 hectares of marsh and swamp in the tidal freshwater portion of the lower Columbia River. The goal of the restoration was to improve habitat for juveniles of Endangered Species Act (ESA)-listed salmon stocks and ESA-listed Columbian white-tailed deer. The U.S. Geological Survey (USGS) monitored and evaluated the fisheries and aquatic resources at Crims Island in 2004 prior to restoration (pre-restoration), which began in August 2004, and then post-restoration from 2006 to 2009. This report summarizes pre- and post-restoration monitoring data used by the USGS to evaluate project success. We evaluated project success by examining the interaction between juvenile salmon and a suite of broader ecological measures including sediments, plants, and invertebrates and their response to large-scale habitat alteration. The restoration action at Crims Island from August 2004 to September 2005 was to excavate a 0.6-meter layer of soil and dig channels in the interior of the island to remove reed canary grass and increase habitat area and tidal exchange. The excavation created 34.4 hectares of tidal emergent marsh where none previously existed and 3.7 hectares of intertidal and subtidal channels. Cattle that had grazed the island for more than 50 years were relocated. Soil excavated from the site was deposited in upland areas next to the tidal marsh to establish an upland forest. Excavation deepened and widened an existing T-shaped channel to increase tidal flow to the interior of the island. The western arm of the existing 'T-channel' was extended westward and connected to Bradbury Slough to create a second outlet to the main river. New intertidal channels were constructed from the existing 'T-channel' and tidal mudflats became inundated at high tide to increase rearing habitat for juvenile salmonids. The restoration action resulted in a 95-percent increase in available juvenile salmon rearing habitat. We collected juvenile salmon and other fishes at Crims Island and a nearby reference site using beach seines and fyke nets annually from March through August during all years. Benthic invertebrates were collected with sediment corers and drift invertebrates were collected with neuston nets. Juvenile salmon stomach contents were sampled using lavage. Vegetation and sediments characteristics were surveyed and we conducted a topographic/bathymetric survey using a RTK (real time kinematic) GPS (global positioning system). The fish assemblage at Crims Island, composed primarily of threespine stickleback (Gasterosteus aculeatus), non-native banded killifish (Fundulus diaphanus), peamouth chub (Mylocheilus caurinus), subyearling Chinook salmon (Oncorhynchus tshawytscha) (hereinafter referred to as subyearlings), and small numbers of juvenile chum salmon (Oncorhynchus keta), did not differ appreciably pre- and post-restoration. Subyearlings were the primary salmonid collected and were seasonally abundant from April through May during all years. The abundance of juvenile salmon declined seasonally as water temperature exceeded 20 degrees C in the Reference site by mid-June; however, subyearlings persisted at the Mainstem site and in subtidal channels of the Restoration site through the summer in water temperatures exceeding 22 degrees C. Residence times of subyearlings in Crims Island backwaters generally were short consisting of one or two tidal cycles. Median residence time was longer in the Restoration site than in the Reference site pre- and post-restoration. Small (mean = 55.7 millimeters) subyea

Scientific Investigations Report↗

USGS2014

Capturing interactions between nitrogen and hydrological cycles under historical climate and land use: Susquehanna watershed analysis with the GFDL land model LM3-TAN

We developed a process model LM3-TAN to assess the combined effects of direct human influences and climate change on terrestrial and aquatic nitrogen (TAN) cycling. The model was developed by expanding NOAA's Geophysical Fluid Dynamics Laboratory land model LM3V-N of coupled terrestrial carbon and nitrogen (C-N) cycling and including new N cycling processes and inputs such as a soil denitrification, point N sources to streams (i.e., sewage), and stream transport and microbial processes. Because the model integrates ecological, hydrological, and biogeochemical processes, it captures key controls of the transport and fate of N in the vegetation–soil–river system in a comprehensive and consistent framework which is responsive to climatic variations and land-use changes. We applied the model at 1/8° resolution for a study of the Susquehanna River Basin. We simulated with LM3-TAN stream dissolved organic-N, ammonium-N, and nitrate-N loads throughout the river network, and we evaluated the modeled loads for 1986–2005 using data from 16 monitoring stations as well as a reported budget for the entire basin. By accounting for interannual hydrologic variability, the model was able to capture interannual variations of stream N loadings. While the model was calibrated with the stream N loads only at the last downstream Susquehanna River Basin Commission station Marietta (40°02' N, 76°32' W), it captured the N loads well at multiple locations within the basin with different climate regimes, land-use types, and associated N sources and transformations in the sub-basins. Furthermore, the calculated and previously reported N budgets agreed well at the level of the whole Susquehanna watershed. Here we illustrate how point and non-point N sources contributing to the various ecosystems are stored, lost, and exported via the river. Local analysis of six sub-basins showed combined effects of land use and climate on soil denitrification rates, with the highest rates in the Lower Susquehanna Sub-Basin (extensive agriculture; Atlantic coastal climate) and the lowest rates in the West Branch Susquehanna Sub-Basin (mostly forest; Great Lakes and Midwest climate). In the re-growing secondary forests, most of the N from non-point sources was stored in the vegetation and soil, but in the agricultural lands most N inputs were removed by soil denitrification, indicating that anthropogenic N applications could drive substantial increase of N 2 O emission, an intermediate of the denitrification process.

Pennsylvania↗