USGS Science⌕ Search

SEARCH · USGS Science

Results for “Journal Interpretation”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 73 records · Page 4Linked to original sources

A combinatorial approach to determine earthquake magnitude distributions on a variable slip-rate fault

Combinatorial methods are used to determine the spatial distribution of earthquake magnitudes on a fault whose slip rate varies along strike. Input to the problem is a finite sample of earthquake magnitudes that span 5 kyr drawn from a truncated Pareto distribution. The primary constraints to the problem are maximum and minimum values around the target slip-rate function indicating where feasible solutions can occur. Two methods are used to determine the spatial distribution of earthquakes: integer programming and the greedy-sequential algorithm. For the integer-programming method, the binary decision vector includes all possible locations along the fault where each earthquake can occur. Once a set of solutions that satisfy the constraints is found, the cumulative slip misfit on the fault is globally minimized relative to the target slip-rate function. The greedy algorithm sequentially places earthquakes to locally optimize slip accumulation. As a case study, we calculate how earthquakes are distributed along the megathrust of the Nankai subduction zone, in which the slip rate varies significantly along strike. For both methods, the spatial distribution of magnitudes depends on slip rate, except for the largest magnitude earthquakes that span multiple sections of the fault. The greedy-sequential algorithm, previously applied to this fault (Parsons et al., 2012), tends to produce smoother spatial distributions and fewer lower magnitude earthquakes in the low slip-rate section of the fault compared to the integer-programming method. Differences in results from the two methods relate to how much emphasis is placed on minimizing the misfit to the target slip rate (integer programming) compared to finding a solution within the slip-rate constraints (greedy sequential). Specifics of the spatial distribution of magnitudes also depend on the shape of the target slip-rate function: i.e. stepped at the section boundaries versus a smooth function. This study isolates the effects of slip-rate variation along a single fault in determining the spatial distribution of earthquake magnitudes, helping to better interpret results from more complex, interconnected fault systems.

Geophysical Journal International↗

Digital to Analog Conversion and Visual Evaluation of Thematic Mapper Data

As a part of the National Aeronautics and Space Administration Landsat D Image Data Quality Analysis Program, the Earth Resources Observation Systems Data Center (EDC) developed procedures to optimize the visual information content of Thematic Mapper data and evaluate the resulting photographic products by visual interpretation. A digital-to-analog transfer function was developed which would properly place the digital values on the most useable portion of a film response curve. Individual black-and-white transparencies generated using the resulting look-up tables were utilized in the production of color-composite images with varying band combinations. Four experienced photointerpreters ranked 2-cm-diameter (0. 75 inch) chips of selected image features of each band combination for ease of interpretability. A nonparametric rank-order test determined the significance of interpreter preference for the band combinations.

Journal of Imaging Technology↗

Seasonal variation in physiological condition of Amblema plicata in the Upper Mississippi River

Measures of physiological condition are being used as sub-lethal endpoints in studies with unionids exposed to a variety of stressors, yet the natural seasonal variation in these measures are largely undocumented. We measured concentrations of glycogen in foot and mantle tissue and a tissue condition index (TCI) in Amblema plicata (Say 1817), about monthly, for 2 years in mussels that were: (1) obtained directly from the Upper Mississippi River (riverine group); and (2) relocated from the river into an artificial pond (relocated group). In both groups, we observed significant seasonal variation in all physiological indicators. Seasonal variation in glycogen was 72% in mantle and 52% in foot tissue and paralleled reproductive activity in this short-term breeder. In the relocated group, most of the variation in glycogen occurred during the first six months after relocation, suggesting that handling stress may have been a contributing factor. The significant seasonal variation in the TCI paralleled glycogen in riverine mussels. We observed tissue-specific differences in glycogen in the riverine group, but not in the relocated group. These data suggest that an interaction of environmental and biological factors influence the energetic status of mussels in natural populations. A better understanding of this variation is needed to interpret changes in physiological condition due to stressors such as relocation.

Journal of Shellfish Research↗

Digital to analog conversion and visual evaluation of Thematic Mapper data

As a part of the National Aeronautics and Space Administration Landsat D Image Data Quality Analysis Program, the Earth Resources Observation Systems Data Center (EDC) developed procedures to optimize the visual information content of Thematic Mapper data and evaluate the resulting photographic products by visual interpretation. A digital-to-analog transfer function was developed which would properly place the digital values on the most useable portion of a film response curve. Individual black-and-white transparencies generated using the resulting look-up tables were utilized in the production of color-composite images with varying band combinations. Four experienced photointerpreters ranked 2-cm-diameter (0. 75 inch) chips of selected image features of each band combination for ease of interpretability. A nonparametric rank-order test determined the significance of interpreter preference for the band combinations.

Journal of Imaging Technology↗

CrustCheck: A conceptual framework for interpreting biocrust trait–function relationships in drylands

Introduction Biocrusts are increasingly recognized for their contribution to soil stability, hydrology, nutrient cycling, and energy balance in drylands, yet practical field methods for assessing functional roles are limited. Existing approaches typically rely on cover estimates, taxonomic identification, or laboratory analyses, providing little insight into functional variation among biocrust types. To address this gap, we developed CrustCheck, a literature-derived conceptual framework that synthesizes potential relationships between easily observable biocrust traits and key ecological functions. The framework provides a foundation for future empirical validation of these relationships. Objectives We aimed to: (1) identify visual characteristics of biocrusts potentially associated with key ecological functions, and (2) synthesize these relationships into a literature-derived conceptual framework for comparative interpretation of potential biocrust contributions to landscape function. Methods We conducted a structured review of global literature on biocrusts' contribution to landscape function, drawing on multiple databases, targeted journals, and identifying relevant scientific publications from reference lists. We screened sources for information on relationships between visual traits and metrics of landscape function, synthesized relationships thematically, and used them to develop a multi-trait, function-oriented conceptual framework to inform further testing of these hypotheses in the field. Results Our review revealed that visual traits such as thickness/height, patchiness, cover, and surface roughness emerged as potential indicators of surface stability, hydrological function, and nutrient accumulation. Community composition was also frequently associated with these functions, while color reflected energy balance and carbon fixation potential. Conclusions Literature reveals that visual traits of biocrusts may serve as proxies for landscape function. CrustCheck is presented here as a conceptual synthesis framework intended to support interpretation of potential trait–function relationships rather than as a quantitatively validated predictive tool.

Restoration Ecology↗

Dual extraction of R-mode and Q-mode factor solutions

It is mathematically possible to extract both R-mode and Q-mode factors simultaneously (RQ-mode factor analysis)by invoking the Eckhart-Young theorem. The resulting factors will be expressed in measures determined by the form of the scalings that have been applied to the original data matrix. Unless the measures for both solutions are meaningful for the problem at hand, the factor results may be misleading or uninterpretable. Correspondence analysis uses a symmetrical scaling of both rows and columns to achieve measures of proportional similarity between objects and variables. In the literature, the resulting similarity is a ??2distance appropriate for analysis of enumerated data, the original application of correspondence analysis. Justification for the use of this measure with interval or ratio data is unconvincing, but a minor modification of the scaling procedure yields the profile similarity, which is an appropriate measure. Symmetrical scaling of rows and columns is unnecessary for RQ-mode factor analysis. If the data are scaled so the minor product W'W is the correlation matrix, the major product WW'is expressed in the Euclidean distances between objects. Therefore, RQ-mode factor analysis can be performed so that the R mode is a principal components solution and the Q mode is a principal coordinates solution. For applications where the magnitudes of differences are important, this approach will yield more interpretable results than will correspondence analysis. ?? 1983 Plenum Publishing Corporation.

Journal of the International Association for Mathe↗

Clay-mineral variability in the suspended sediments of the San Francisco Bay system, California

Semiquantitative determinations of the clay-mineral composition have been made on nearly synoptic samples of surface suspended sediments collected seasonally throughout the San Francisco Bay system. The relative amounts of chlorite + kaolinite are generally highest in the northern reach of the system, whereas illite is dominant in the southern reach. The proportion of montmorillonite is low throughout the bay. Time-series and replicate samples collected at individual stations show that the difference in clay-mineral content between reaches is real and reflects a change in the source of clay-mineral particles within the bay. The Sacramento-San Joaquin river system supplies the northern reach, whereas most clay-mineral particles come from resuspension by waves and tidal currents in the southern reach. Analyses of bottom sediments and the spatial variability in the northern reach suggest that the relationship between the abundance and sources of clay minerals may, in turn, be a function of particle size. This study demonstrates the utility of suspended clay minerals in the interpretation of sediment-dispersal patterns in estuaries.

California↗

Tools for quantifying isotopic niche space and dietary variation at the individual and population level.

Ecologists are increasingly using stable isotope analysis to inform questions about variation in resource and habitat use from the individual to community level. In this study we investigate data sets from 2 California sea otter ( Enhydra lutris nereis ) populations to illustrate the advantages and potential pitfalls of applying various statistical and quantitative approaches to isotopic data. We have subdivided these tools, or metrics, into 3 categories: IsoSpace metrics, stable isotope mixing models, and DietSpace metrics. IsoSpace metrics are used to quantify the spatial attributes of isotopic data that are typically presented in bivariate (e.g., δ 13 C versus δ 15 N) 2-dimensional space. We review IsoSpace metrics currently in use and present a technique by which uncertainty can be included to calculate the convex hull area of consumers or prey, or both. We then apply a Bayesian-based mixing model to quantify the proportion of potential dietary sources to the diet of each sea otter population and compare this to observational foraging data. Finally, we assess individual dietary specialization by comparing a previously published technique, variance components analysis, to 2 novel DietSpace metrics that are based on mixing model output. As the use of stable isotope analysis in ecology continues to grow, the field will need a set of quantitative tools for assessing isotopic variance at the individual to community level. Along with recent advances in Bayesian-based mixing models, we hope that the IsoSpace and DietSpace metrics described here will provide another set of interpretive tools for ecologists.

Journal of Mammalogy↗

Lightning fires in North Dakota grasslands and in pine-savanna lands of South Dakota and Montana

Lightning strike fires which occurred between 1940 and 1981 were studied in mixed-grass prairie grasslands and in pine-savanna lands in the Northern Great Plains region. A majority (73%) of ignitions occurred during July and August, while a lesser number was recorded in April, May, June, and September. The April-September period is also the average time of the freeze-free period and approximates the average distribution period for thunderstorm activity in this region. The area burned by each of 293 lightning fires (most of which were suppressed) ranged from 0.004-1158.3 ha ( X̄ = 10.8 ha). The frequency of lightning fires in mixed-grass prairie grasslands averaged 6.0/yr per 10,000 km 2 in eastern North Dakota, 22.4/yr per 10,000 km 2 in southcentral North Dakota, 24.7/yr per 10,000 km 2 in western North Dakota, and 91.7/yr per 10,000 km 2 in pine-savanna lands in northwestern South Dakota and southeastern Montana. The ecological role of lightning-set fires is discussed relative to the development of resource research and management plans and to the interpretation of historical records of natural fire occurrence in the Northern Great Plains region.

Journal of Range Management↗

A refined index of model performance: a rejoinder

Willmott et al. [Willmott CJ, Robeson SM, Matsuura K. 2012. A refined index of model performance. International Journal of Climatology , forthcoming. DOI:10.1002/joc.2419.] recently suggest a refined index of model performance ( d r ) that they purport to be superior to other methods. Their refined index ranges from − 1.0 to 1.0 to resemble a correlation coefficient, but it is merely a linear rescaling of our modified coefficient of efficiency ( E 1 ) over the positive portion of the domain of d r . We disagree with Willmott et al. ( 2012 ) that d r provides a better interpretation; rather, E 1 is more easily interpreted such that a value of E 1 = 1.0 indicates a perfect model (no errors) while E 1 = 0.0 indicates a model that is no better than the baseline comparison (usually the observed mean). Negative values of E 1 (and, for that matter, d r < 0.5) indicate a substantially flawed model as they simply describe a ‘level of inefficacy’ for a model that is worse than the comparison baseline. Moreover, while d r is piecewise continuous, it is not continuous through the second and higher derivatives. We explain why the coefficient of efficiency ( E or E 2 ) and its modified form ( E 1 ) are superior and preferable to many other statistics, including d r , because of intuitive interpretability and because these indices have a fundamental meaning at zero. We also expand on the discussion begun by Garrick et al. [Garrick M, Cunnane C, Nash JE. 1978. A criterion of efficiency for rainfall-runoff models. Journal of Hydrology 36 : 375-381.] and continued by Legates and McCabe [Legates DR, McCabe GJ. 1999. Evaluating the use of “goodness-of-fit” measures in hydrologic and hydroclimatic model validation. Water Resources Research 35 (1): 233-241.] and Schaefli and Gupta [Schaefli B, Gupta HV. 2007. Do Nash values have value? Hydrological Processes 21 : 2075-2080. DOI: 10.1002/hyp.6825.]. This important discussion focuses on the appropriate baseline comparison to use, and why the observed mean often may be an inadequate choice for model evaluation and development.

International Journal of Climatology↗

Electromagnetic methods for mapping freshwater lenses on Micronesian atoll islands

The overall shape of freshwater lenses can be determined by applying electromagnetic methods and inverse layered-earth modeling to the mapping of atoll island freshwater lenses. Conductivity profiles were run across the width of the inhabited islands at Mwoakilloa, Pingelap, and Sapwuahfik atolls of the Pohnpei State, Federated States of Micronesia using a dual-loop, frequency-domain, electromagnetic profiling system. Six values of apparent conductivity were recorded at each sounding station and were used to interpret layer conductivities and/or thicknesses. A three-layer model that includes the unsaturated, freshwater, and saltwater zones was used to simulate apparent-conductivity data measured in the field. Interpreted results were compared with chloride-concentration data from monitoring wells and indicate that the interface between freshwater and saltwater layers, defined from electromagnetic data, is located in the upper part of the transition zone, where the chloride-concentration profile shows a rapid increase with depth. The electromagnetic method can be used to interpret the thickness of the freshwater between monitoring wells, but can not be used to interpret the thickness of freshwater from monitoring wells to the margin of an island.

Journal of Hydrology↗

The potential role of very high-resolution imagery to characterise lake, wetland and stream systems across the Prairie Pothole Region, United States

Aquatic features critical to watershed hydrology range widely in size from narrow, shallow streams to large, deep lakes. In this study we evaluated wetland, lake, and river systems across the Prairie Pothole Region to explore where pan-sharpened high-resolution (PSHR) imagery, relative to Landsat imagery, could provide additional data on surface water distribution and movement, missed by Landsat. We used the monthly Global Surface Water (GSW) Landsat product as well as surface water derived from Landsat imagery using a matched filtering algorithm (MF Landsat) to help consider how including partially inundated Landsat pixels as water influenced our findings. The PSHR outputs (and MF Landsat) were able to identify ~60–90% more surface water interactions between waterbodies, relative to the GSW Landsat product. However, regardless of Landsat source, by documenting many smaller (<0.2 ha), inundated wetlands, the PSHR outputs modified our interpretation of wetland size distribution across the Prairie Pothole Region.

Prairie Pothole Region↗

Redd superimposition mediates the accuracy, precision, and significance of redd counts for cutthroat trout

Redd counts are commonly applied to estimate spawning population size for salmonids and allow for broad spatial and temporal coverage in monitoring efforts. However, the utility of redd counts may be compromised by observation error, particularly with respect to superimposition, where later arriving spawners construct redds overlapping existing redds. Here, we provide a mechanistic evaluation of the effects of superimposition on the error structure and biological significance of redd count data for Yellowstone cutthroat trout ( Oncorhynchus clarkii bouvieri ) spawning within tributaries to the Snake River, Wyoming. We used a Bayesian framework to parse observation error into distinct components and found low detection of redd clusters (i.e., areas of superimposition) was offset by overestimates of the number of redds per cluster, such that observed counts accurately reflected census redd abundance. However, a saturating relationship between redd counts and spawner abundance indicated that counts is best interpreted as effective reproductive effort rather than spawner abundance. Our results provide a mechanistic understanding of redd count data that can be used to assess their application and interpretation for monitoring.

Wyoming↗

Juvenile rainbow trout production in New York tributaries of Lake Ontario: implications for Atlantic salmon restoration

Three Pacific salmonid species Onchorynchus spp. have replaced the extirpated Atlantic salmon Salmo salar as the main migratory salmonid in the Lake Ontario drainage. One of those species, the nonnative rainbow trout O. mykiss, has become widely distributed within the historical Atlantic salmon habitat, occupying an ecological niche similar to that of juvenile Atlantic salmon. Consequently, both a tributary's carrying capacity for Atlantic salmon and competition from established nonnative species are important when considering the feasibility of Atlantic salmon restoration. Estimation of juvenile rainbow trout production will help evaluate the capacity of tributaries to produce salmonids that occupy similar niches. Geostatistical methods were applied to standardized and efficiency-corrected electrofishing data from three of New York's best salmonid-producing streams to precisely estimate juvenile rainbow trout populations. Results indicated that each study stream could produce 20,000&ndash;40,000 age-0 and 4,000&ndash;10,000 age-1 and older rainbow trout per year. Statistical interpolation indicated areas of significantly different production potential and points of significant changes in productivity. Closer examination of the niche similarity and competitive potential of these two species is needed to properly interpret these estimates with regard to Atlantic salmon restoration.

New York↗

The early bird gets the shrimp: Confronting assumptions of isotopic equilibrium and homogeneity in a wild bird population

1. Because stable isotope distributions in organic material vary systematically across energy gradients that exist in ecosystems, community and population structures, and in individual physiological systems, isotope values in animal tissues have helped address a broad range of questions in animal ecology. It follows that every tissue sample provides an isotopic profile that can be used to study dietary or movement histories of individual animals. Interpretations of these profiles depend on the assumption that metabolic pools are isotopically well mixed and in equilibrium with dietary resources prior to tissue synthesis, and they extend to the population level by assuming isotope profiles are identically distributed for animals using the same proximal dietary resource. As these assumptions are never fully met, studying structure in the variance of tissue isotope values from wild populations is informative. 2. We studied variation in &delta; 13 C, &delta; 15 N, &delta; 2 H and &delta; 18 O data for feathers from a population of eared grebes (Podiceps nigricollis) that migrate to Great Salt Lake each fall to moult feathers. During this time, they cannot fly and feed almost exclusively on superabundant brine shrimp (Artemia franciscana). The ecological simplicity of this situation minimized the usual spatial and trophic complexities often present in natural studies of feather isotope values. 3. Ranges and variances of isotope values for the feathers were larger than those from previously published studies that report feather isotopic variance, but they were bimodally distributed in all isotope dimensions. Isotope values for proximal dietary resources and local surface water show that some of the feathers we assumed to have been grown locally must have been grown before birds reached isotopic equilibrium with local diet or immediately prior to arrival at Great Salt Lake. 4. Our study provides novel insights about resource use strategies in eared grebes during migration. More generally, it demonstrates the utility of studying variance structures and questioning assumptions implicit in the interpretation of stable isotope data from wild animals.

Utah↗

Changes in seismic velocity during the first 14 months of the 2004–2008 eruption of Mount St. Helens, Washington

Mount St. Helens began erupting in late 2004 following an 18&thinsp;year quiescence. Swarms of repeating earthquakes accompanied the extrusion of a mostly solid dacite dome over the next 4&thinsp;years. In some cases the waveforms from these earthquakes evolved slowly, likely reflecting changes in the properties of the volcano that affect seismic wave propagation. We use coda-wave interferometry to quantify small changes in seismic velocity structure (usually <1%) between two similar earthquakes and employed waveforms from several hundred families of repeating earthquakes together to create a continuous function of velocity change observed at permanent stations operated within 20&thinsp;km of the volcano. The high rate of earthquakes allowed tracking of velocity changes on an hourly time scale. Changes in velocity were largest near the newly extruding dome and likely related to shallow deformation as magma first worked its way to the surface. We found strong correlation between velocity changes and the inverse of real-time seismic amplitude measurements during the first 3&thinsp;weeks of activity, suggesting that fluctuations of pressure in the shallow subsurface may have driven both seismicity and velocity changes. Velocity changes during the remainder of the eruption likely result from a complex interplay of multiple effects and are not well explained by any single factor alone, highlighting the need for complementary geophysical data when interpreting velocity changes.

Journal of Geophysical Research B: Solid Earth↗

A broader definition of occupancy: A reply to Hayes and Monofils

Occupancy models are widely used to analyze presence&ndash;absence data for a variety of taxa while accounting for observation error (MacKenzie et al. 2002, 2006; Tyre et al. 2003; Royle and Dorazio 2008). Hayes and Monfils (2015) question their use for analyzing avian point count data based on purported violations of model assumptions incurred by avian mobility. Animal mobility is an important consideration, not just for occupancy models, but for a variety of population and habitat models (Boyce 2006, Royle et al. 2009, Manning and Goldberg 2010, Dormann et al. 2013, Renner et al. 2015). Nevertheless, we believe the ultimate conclusions of Hayes and Monfils are shortsighted mainly due to a narrow interpretation of occupancy. Rather than turn away from the use of occupancy models, we believe they remain an appropriate method for analyzing many data sets collected from avian point count surveys. Further, we suggest that there is value in having a broader and more nuanced interpretation of occupancy that incorporates the potential for animal movement.

Journal of Wildlife Management↗