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62 records · Page 4Linked to original sources
USGS1998

Health evaluation of pronghorns (Antilocapra americana) on Hart Mountain National Antelope Refuge in southeastern Oregon, 1996-1997.

One hundred four neonatal (fawns) and 40 adult female (does) pronghorn antelope (pronghorns) ( Antilocapra americana ) were captured on the Hart Mountain National Antelope Refuge (HMNAR) in Lake County, southeastern Oregon, between 13 May 1996 and 26 May 1997. Blood and fecal samples were taken for an investigation of low fawn survival that may be due to disease and/or poor nutrition. No abnormalities were found in hematological parameters of adult does (n = 40) or fawns (n = 44 to 67). In general, there were lower serum total proteins (TP) and Blood Urea Nitrogen (BUN) concentrations in this population than in other populations from Alberta, Canada; Idaho; and Baker City, Oregon. Mean BUN values in does were significantly lower (p < 0.001) in December than March. The duration of this apparently low protein content of the December diet may affect the weight of the newborn and consequent survivability if it should continue into late gestation (March-May). Serum copper (Cu) levels in does (range 0.39 to 0.74 ppm) were considered marginal when compared to domestic animals and some wild ungulates. Fawns had low but apparently normal Cu levels at birth and reached the does' marginal values in about three days. Whole blood and serum Selenium (Se) levels (<100 ng/ml) were considered to be marginal to low in most segments of the pronghorn population in this study. However, serum levels of vitamin E (range 1.98 - 3.27 pg/ml), as determined from the does captured in March, are apparently sufficient to offset any signs of deficiency due to low Se levels. No clinical signs of Cu or Se deficiency were observed. Does captured in December 1996 were tested for neutralizing antibodies to Brucella spp. (n = 20, neg.), Leptospira spp. (n = 20, neg.), bluetongue virus (n = 20, 35% pos.), epizootic hemorrhagic disease virus (n = 20, 30% pos.), respiratory syncytial virus (n = 18, neg.), parainfluenza virus type 3 (n = 18, 67% pos.), infectious bovine rhinotracheitis (n = 18, neg.), and bovine viral diarrhea (n = 18, neg.). Seventeen fawns (9F,8M), nine in 1996 and eight in 1997, survived until at least mid-July each year. Fifty-five of 87 dead fawns were necropsied. Predation by coyotes (Canis latrans) accounted for the majority of fawn mortality (62%), as determined by necropsy, during the two combined summer periods. Other causes of mortality for the combined years included predation by eagle (4%), dystocia (2%), septicemic pasteurellosis (5%), starvation/weak fawn syndrome

Oregon↗
USGS2018

Cytonuclear discordance in the Florida Everglades invasive Burmese python (Python bivittatus) population reveals possible hybridization with the Indian python (P. molurus)

The invasive Burmese python ( Python bivittatus ) has been reproducing in the Florida Everglades since the 1980s. These giant constrictor snakes have caused a precipitous decline in small mammal populations in southern Florida following escapes or releases from the commercial pet trade. To better understand the invasion pathway and genetic composition of the population, two mitochondrial (mtDNA) loci across 1,398 base pairs were sequenced on 426 snakes and 22 microsatellites were assessed on 389 snakes. Concatenated mtDNA sequences produced six haplotypes with an average nucleotide and haplotype diversity of π = 0.002 and h = 0.097, respectively. Samples collected in Florida from morphologically identified P. bivittatus snakes were similar to published cytochrome oxidase 1 and cytochrome b sequences from both P. bivittatus and Python molurus and were highly divergent (genetic distances of 5.4% and 4.3%, respectively). The average number of microsatellite alleles and expected heterozygosity were N A = 5.50 and H E = 0.60, respectively. Nuclear Bayesian assignment tests supported two genetically distinct groups and an admixed group, not geographically differentiated. The effective population size ( N E = 315.1) was lower than expected for a population this large, but reflected the low genetic diversity overall. The patterns of genetic diversity between mtDNA and microsatellites were disparate, indicating nuclear introgression of separate mtDNA lineages corresponding to cytonuclear discordance. The introgression likely occurred prior to the invasion, but genetic information on the native range and commercial trade is needed for verification. Our finding that the Florida python population is comprised of distinct lineages suggests greater standing variation for adaptation and the potential for broader areas of suitable habitat in the invaded range.

Florida↗
USGS2016

Groundwater level trends and drivers in two northern New England glacial aquifers

We evaluated long-term trends and predictors of groundwater levels by month from two well-studied northern New England forested headwater glacial aquifers: Sleepers River, Vermont, 44 wells, 1992-2013; and Hubbard Brook, New Hampshire, 15 wells, 1979-2004. Based on Kendall Tau tests with Sen slope determination, a surprising number of well-month combinations had negative trends (decreasing water levels) over the respective periods. Sleepers River had slightly more positive than negative trends overall, but among the significant trends ( p < 0.1), negative trends dominated 67 to 40. At Hubbard Brook, negative trends outnumbered positive trends by a nearly 2:1 margin and all seven of the significant trends were negative. The negative trends occurred despite generally increasing trends in monthly and annual precipitation. This counterintuitive pattern may be a result of increased precipitation intensity causing higher runoff at the expense of recharge, such that evapotranspiration demand draws down groundwater storage. We evaluated predictors of month-end water levels by multiple regression of 18 variables related to climate, streamflow, snowpack, and prior month water level. Monthly flow and prior month water level were the two strongest predictors for most months at both sites. The predictive power and ready availability of streamflow data can be exploited as a proxy to extend limited groundwater level records over longer time periods.

New Hampshire, Vermont↗
USGS2023

Compensatory mortality explains rodent resilience to an invasive predator

Invasive Burmese pythons ( Python bivittatus ) in the Everglades of Florida, United States, have drastically reduced populations of mammals, yet populations of some rodents appear unaffected by the invasion. To understand this pattern, we radio-tagged cotton rats ( Sigmodon hispidus ) in areas of high and low python occurrence densities (hereafter occurrence) and quantified the effects of python occurrence, seasonality, and sex on their survival and cause-specific mortality. Cotton rat survival was not influenced by difference in python occurrence (hazard ratio = 1.32, 95% CI = 0.77–2.26, P = 0.30). However, cotton rats were at greater risk from mortalities caused by mammals in areas of low python occurrence. In areas with elevated python occurrence, we attributed most cotton rat mortalities to birds of prey (48.6%) and reptiles (non-python = 24.3%, python = 16.2%). Where python occurrence was relatively low, we attributed cotton rat mortalities to native reptilian (28.6%), avian (35.7%), and mammalian predators (35.7%) with no python-related deaths. In total, pythons were responsible for 11.8% of all cotton rat mortalities. Finding no difference in the survival of cotton rats, despite differences in the causative agents of mortality, suggests that predation pressure from an invasive predator was compensatory for cotton rat population dynamics. This type of compensatory mortality is common for small mammals and helps explain why mammal communities in python-invaded portions of the Greater Everglades Ecosystem are increasingly dominated by cotton rats and other rodents.

Journal of Mammalogy↗
USGS2015

Environmental DNA (eDNA) sampling improves occurrence and detection estimates of invasive Burmese pythons

Environmental DNA (eDNA) methods are used to detect DNA that is shed into the aquatic environment by cryptic or low density species. Applied in eDNA studies, occupancy models can be used to estimate occurrence and detection probabilities and thereby account for imperfect detection. However, occupancy terminology has been applied inconsistently in eDNA studies, and many have calculated occurrence probabilities while not considering the effects of imperfect detection. Low detection of invasive giant constrictors using visual surveys and traps has hampered the estimation of occupancy and detection estimates needed for population management in southern Florida, USA. Giant constrictor snakes pose a threat to native species and the ecological restoration of the Florida Everglades. To assist with detection, we developed species-specific eDNA assays using quantitative PCR (qPCR) for the Burmese python ( Python molurus bivittatus ), Northern African python ( P . sebae ), boa constrictor ( Boa constrictor ), and the green ( Eunectes murinus ) and yellow anaconda ( E . notaeus ). Burmese pythons, Northern African pythons, and boa constrictors are established and reproducing, while the green and yellow anaconda have the potential to become established. We validated the python and boa constrictor assays using laboratory trials and tested all species in 21 field locations distributed in eight southern Florida regions. Burmese python eDNA was detected in 37 of 63 field sampling events; however, the other species were not detected. Although eDNA was heterogeneously distributed in the environment, occupancy models were able to provide the first estimates of detection probabilities, which were greater than 91%. Burmese python eDNA was detected along the leading northern edge of the known population boundary. The development of informative detection tools and eDNA occupancy models can improve conservation efforts in southern Florida and support more extensive studies of invasive constrictors. Generic sampling design and terminology are proposed to standardize and clarify interpretations of eDNA-based occupancy models.

Florida↗
USGS2018

Gas hydrate quantification using full-waveform inversion of sparse ocean-bottom seismic data: A case study from Green Canyon Block 955, Gulf of Mexico

We present a case study of gas hydrate quantification using dense short-offset multichannel seismic (MCS) and sparse long-offset ocean-bottom-seismometer (OBS) data in lease block Green Canyon 955 (GC955), Gulf of Mexico (GOM), where the presence of gas hydrate was interpreted using logging while drilling (LWD) data acquired by the GOM Gas Hydrate Joint Industry Project Leg II expedition. We use frequency-domain full-waveform inversion (FWI) of seven OBS gathers to invert for a P-wave velocity model of an approximately 7 km long MCS profile connecting two LWD sites, GC955-H and GC955-Q. We build the starting model for FWI using traveltime inversion (TI) of the MCS and OBS data. In addition, we use the TI model for depth migrating the MCS stack. At the LWD sites, we constrain the hydrate saturation (Sgh) using sonic and resistivity logs. Unfortunately, as is typical of seismic quantification problems, the FWI model resolution is not sufficient to extrapolate the LWD-based Sgh. Therefore, we apply Backus averaging to the sonic log, at 60 m wavelength, bringing it within approximately 8% of the FWI model and make the assumption that averaging the sonic log is same as redistributing the gas hydrate within the Backus wavelength. In this manner, instead of Sgh, the FWI model is able to estimate the total gas hydrate volume. In the end, we use the FWI model and the migrated stack to constrain the locations and bulk volumes of free gas and gas hydrate. Our results demonstrate that with careful processing, reasonable estimates on locations and bulk volumes of submarine gas hydrate accumulations can be achieved even with sparse seismic data that are not adequate for amplitude-based assessments.

Geophysics↗
USGS2001

Surface Fractures Formed in the Potrero Canyon, Tapo Canyon, and McBean Parkway Areas in Association with the 1994 Northridge, California Earthquake

INTRODUCTION The magnitude 6.7 (M6.7) Northridge earthquake of 17 January 1994 strongly shook the Los Angeles urban region, resulting in 33 direct deaths, more than 20,000 people forced out of their homes, and an estimated $20 billion in damage (Hall, 1994). The earthquake was caused by slip on a previously unrecognized south-dipping fault buried beneath the San Fernando Valley. Slip on the fault propagated from a depth of about 19 km to about 8 km below the ground surface (USGS and SCEC, 1994). Although there was no surface faulting associated with the causative fault, surface fractures did develop along at least one fault (Mission Wells fault) and also in areas without recognized faults (Hart and others, 1995; Hecker and others, 1995a, 1995b; Rymer and others, 1995; Treiman, 1995). The term 'surface fractures' is used herein to describe ground breakage that is not associated with primary faulting or with triggered, secondary, surface faulting on a deep seismogenic fault. This report describes fault- and nonfault-related surface fractures that occurred at three sites, Potrero Canyon, Tapo Canyon, and the McBean Parkway area, 22 to 28 km north-northwest of the main shock (Fig. 1). Investigation of these sites documents far reaching effects of even moderately large earthquakes. Study of such effects has become increasingly important with further urbanization and development. Hecker and others (1995a, 1995b) documented the distribution of surface deformation associated with the Northridge earthquake in the Granada Hills area. The search for surface faulting and surface fracturing was initiated within hours of the earthquake. Both ground and airborne searches were made of the region. After fresh surface fractures were found in Potrero Canyon, aerial photographs were taken of the area (including the McBean Parkway site) by I.K. Curtis, on 21 January 1994, at scales of about 1:2,000 and 1:6,000. These aerial photographs were studied under high magnification to supplement ground-based observations of surface fractures.

Miscellaneous Field Studies Map↗
USGS2000

Preliminary report on the 16 October 1999 M 7.1 Hector mine, California, earthquake

The M w 7.1 Hector Mine, California, earthquake occurred at 9:46 GMT on 16 October 1999. The event caused minimal damage because it was located in a remote, sparsely populated part of the Mojave Desert, approximately 47 miles east-southeast of Barstow, with epicentral coordinates 34.59°N 116.27°W and a hypocentral depth of 5 ± 3 km. Twelve foreshocks, M 1.9-3.8, preceded the mainshock during the previous twelve hours. All of these events were located close to the hypocenter of the mainshock. The Hector Mine earthquake occurred within the Eastern California Shear Zone (ECSZ). By virtue of its remote location, the societal impact of the Hector Mine earthquake was, fortunately, minimal in spite of the event's appreciable size. The ECSZ is characterized by high seismicity, a high tectonic strain rate, and a broad, distributed zone of north-northwest-trending faults (ECSZ; Figure 1 ; Dokka and Travis, 1990 ; Sauber et al., 1986 ; Sauber et al., 1994 ; Sieh et al., 1993 ). Data regarding the slip rates of faults within the ECSZ suggest that on the order of 15% of the Pacific-North American plate motion occurs along this zone ( Sauber et al., 1986 ; Wesnousky, 1986 ). Most of the faults in the ECSZ have low slip rates and long repeat times for major earthquakes, on the order of several thousands to tens of thousands of years. The occurrence of the Hector Mine earthquake within seven years and only about 30 km east of the 1992 M w 7.3 Landers earthquake suggests that the closely spaced surface faults in the ECSZ are mechanically related. The Hector Mine event involved rupture on two previously mapped fault zones—the Bullion Fault and an unnamed, more northerly-trending fault that is informally referred to in this paper as the Lavic Lake Fault (Dibblee, 1966 , 1967a , b ). Traces of the Bullion Fault exhibit evidence of Holocene displacement and were zoned as active in 1988 under California's Mquist-Priolo Earthquake Fault Zoning Act ( Hart and Bryant, 1997 ). The pattern of rupture along more than one named fault was also observed from the 1992 Landers earthquake ( Hauksson et al., 1993 ; Sieh et al., 1994). Much of the fault zone that produced the Hector Mine earthquake had been buried by relatively young stream deposits, and the fault scarps in bedrock have a subdued morphology. It appears that these faults have not experienced significant offset for perhaps 10,000 years or more ( Hart, 1987 ). Planned future investigations will refine the age of the last event on these faults. The portion of the Lavic Lake Fault that ruptured between the northern end of the Bullion Mountains and Lavic Lake had not previously been mapped. However, our field investigations have identified ancient, subdued fault scarps along portions of the 1999 rupture zone in this area. It thus appears that the entire segment of the Lavic Lake Fault that was involved in the 1999 event had ruptured in the past. As is typical for most faults within the Eastern California Shear Zone, the rate of movement along the Lavic Lake Fault may be quite slow (<1 mm/yr) and should produce earthquakes only infrequently. This event is a reminder that faults that have ruptured in late Quaternary time, but that lack evidence of Holocene displacement, can still produce earthquakes in this low-slip-rate tectonic setting. Additionally, the Hector Mine earthquake is noteworthy for a couple of other reasons. First, it clearly produced triggered seismicity over much of southern California, from the rupture zone toward the south-southwest in particular. Second, as we will discuss, the event may provide new data and insight into recently developed paradigms concerning earthquake interactions and the role of static stress changes. Questions such as these will, of course, be the subject of extensive detailed analyses in years to come. Fortunately, the Hector Mine sequence will provide one of the best data sets obtained to date for a significant earthquake in the United States. Because it occurred when major upgrades to both the regional seismic network (TriNet) and the regional geodetic network (SCIGN) were well underway, the Earth science community will have abundant high-quality data with which to explore the important and interesting questions that have been raised. In this paper, we present and discuss the basic data and preliminary results from the Hector Mine earthquake.

California↗