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USGS1991

Topographical and geological amplification: Case studies and engineering implications

Topographical and geological amplification that occurred during past earthquakes are quantified using spectral ratios of recorded motions. Several cases are presented from the 1985 Chilean and Mexican earthquakes as well as the 1983 Coalinga (California) and 1987 Supersition Hills (California) earthquake. The strong motions recorded in Mexico City during the 1985 Michoacan earthquake are supplemented by ambient motions recorded within Mexico City to quantify the now well known resonating frequencies of the Mexico City lakebed. Topographical amplification in Canal Beagle (Chile), Coalinga and Superstition Hills (California) are quantified using the ratios derived from the aftershocks following the earthquakes. A special dense array was deployed to record the aftershocks in each case. The implications of both geological and topographical amplification are discussed in light of current code provisions. The observed geological amplifications has already influenced the code provisions. Suggestions are made to the effect that the codes should include further provisions to take the amplification due to topography into account.

Structural Safety↗

USGS2013

Hydrology and water quality of Shell Lake, Washburn County, Wisconsin, with special emphasis on the effects of diversion and changes in water level on the water quality of a shallow terminal lake

Shell Lake is a relatively shallow terminal lake (tributaries but no outlets) in northwestern Wisconsin that has experienced approximately 10 feet (ft) of water-level fluctuation over more than 70 years of record and extensive flooding of nearshore areas starting in the early 2000s. The City of Shell Lake (City) received a permit from the Wisconsin Department of Natural Resources in 2002 to divert water from the lake to a nearby river in order to lower water levels and reduce flooding. Previous studies suggested that water-level fluctuations were driven by long-term cycles in precipitation, evaporation, and runoff, although questions about the lake’s connection with the groundwater system remained. The permit required that the City evaluate assumptions about lake/groundwater interactions made in previous studies and evaluate the effects of the water diversion on water levels in Shell Lake and other nearby lakes. Therefore, a cooperative study between the City and U.S. Geological Survey (USGS) was initiated to improve the understanding of the hydrogeology of the area and evaluate potential effects of the diversion on water levels in Shell Lake, the surrounding groundwater system, and nearby lakes. Concerns over deteriorating water quality in the lake, possibly associated with changes in water level, prompted an additional cooperative project between the City and the USGS to evaluate efeffects of changes in nutrient loading associated with changes in water levels on the water quality of Shell Lake. Numerical models were used to evaluate how the hydrology and water quality responded to diversion of water from the lake and historical changes in the watershed. The groundwater-flow model MODFLOW was used to simulate groundwater movement in the area around Shell Lake, including groundwater/surface-water interactions. Simulated results from the MODFLOW model indicate that groundwater flows generally northward in the area around Shell Lake, with flow locally converging toward the lake. Total groundwater inflow to Shell Lake is small (approximately 5 percent of the water budget) compared with water entering the lake from precipitation (83 percent) and surface-water runoff (13 percent). The MODFLOW model also was used to simulate average annual hydrologic conditions from 1949 to 2009, including effects of the removal of 3 billion gallons of water during 2003–5. The maximum decline in simulated average annual water levels for Shell Lake due to the diversion alone was 3.3 ft at the end of the diversion process in 2005. Model simulations also indicate that although water level continued to decline through 2009 in response to local weather patterns (local drought), the effects of the diversion decreased after the diversion ceased; that is, after 4 years of recovery (2006–9), drawdown attributable to the diversion alone decreased by about 0.6 ft because of increased groundwater inflow and decreased lake-water outflow to groundwater caused by the artificially lower lake level. A delayed response in drawdown of less than 0.5 ft was transmitted through the groundwater-flow system to upgradient lakes. This relatively small effect on upgradient lakes is attributed in part to extensive layers of shallow clay that limit lake/groundwater interaction in the area. Data collected in the lake indicated that Shell Lake is polymictic (characterized by frequent deep mixing) and that its productivity is limited by the amount of phosphorus in the lake. The lake was typically classified as oligotrophic-mesotrophic in June, mesotrophic in July, and mesotrophic-eutrophic in August. In polymictic lakes like Shell Lake, phosphorus released from the sediments is not trapped near the bottom of the lake but is intermittently released to the shallow water, resulting in deteriorating water quality as summer progresses. Because the productivity of Shell Lake is limited by phosphorus, the sources of phosphorus to the lake were quantified, and the response in water quality to changes in phosphorus inputs were evaluated by means of eutrophication models. During 2009, the total input of phosphorus to Shell Lake was 1,730 pounds (lb), of which 1,320 lb came from external sources (76 percent) and 414 lb came from internal loading from sediments in the lake (24 percent). The largest external source was from surface-water runoff, which delivered about 52 percent of the total phosphorus load compared with about 13 percent of the water input. The second largest source was from precipitation (wetfall and dryfall), which delivered 19 percent of the load compared to about 83 percent of the water input. Contributions from septic systems and groundwater accounted for about 3 and 2 percent, respectively. Increased runoff raises water levels in the lake but does not necessarily increase phosphorus loading because phosphorus concentrations in the tributaries decline during increased flow, possibly because of shorter retention times in upstream wetlands. Phosphorus loading to the lake in 2009 represented what occurred after a series of dry years; therefore, this information was combined with data from 2011, a wet year, to estimate phosphorus loading during a range of hydrologic conditions by estimating loading from each component of the phosphorus budget for each year from 1949 to 2011. Comparisons of historical water-quality records with historical water levels and applications of a hydrodynamic model (Dynamic Lake Model, DLM) and empirical eutrophication models were used to understand how changes in water level and the coinciding changes in phosphorus loading affect the water quality of Shell Lake. DLM simulations indicate that large changes in water level (approximately 10 ft) affect the persistence of stratification in the lake. During periods with low water levels, the lake is a well-mixed, polymictic system, with water quality degrading slightly as summer progresses. During periods with high water levels, the lake is more stratified, and phosphorus from internal loading is trapped in the hypolimnion and released later in summer, which results in more extreme seasonality in water quality and better clarity in early summer. Results of eutrophication model simulations using a range in external phosphorus inputs illustrate how water quality in Shell Lake (phosphorus and chlorophyll a concentrations and Secchi depths) responds to changes in external phosphorus loading. Results indicate that a 50-percent reduction in external loading from that measured in 2009 would be required to change phosphorus concentrations from 0.018 milligram per liter (mg/L) (measured in 2009) to 0.012 mg/L (estimated for the mid-1800s from analysis of diatoms in sediment cores). Such reductions in phosphorus loading cannot be accomplished by targeting septic systems or internal loading alone because septic systems contribute only about 3 percent of the phosphorus input to the lake, and internal loading from the sediments of Shell Lake contributes only about 25 percent of phosphorus input. Complete elimination of phosphorus from septic systems and internal loading would decrease the phosphorus concentrations in the lake by 0.003–0.004 mg/L. Therefore, reducing phosphorus concentration in the lake more than by 0.004 mg/L requires decreasing phosphorus loading from surface-water contributions, primarily runoff to the lake. Reconstructed changes in water quality from 1860 to 2010, based on changes in the diatom communities archived in the sediments and eutrophication model simulations, suggest that anthropogenic changes in the watershed (sawmill construction in 1881; the establishment of the village of Shell Lake; and land-use changes in the 1920s, including increased agriculture) had a much larger effect on water quality than the natural changes associated with fluctuations in water level. Although the effects of natural changes in water level on water quality appear to be small, changes in water level do have a modest effect on water quality, primarily manifested as small improvements during higher water levels. Fluctuations in water level, however, have a larger effect on the seasonality of water-quality patterns, with better water quality, especially increased Secchi depths, in early summer during years with high water levels.

Wisconsin↗

USGS2019

The future is now: Amplicon sequencing and sequence capture usher in the conservation genomics era

The genomics revolution has initiated a new era of population genetics where genome-wide data are frequently used to understand complex patterns of population structure and selection. However, the application of genomic tools to inform management and conservation has been somewhat rare outside a few well studied species. Fortunately, two recently developed approaches, amplicon sequencing and sequence capture, have the potential to significantly advance the field of conservation genomics. Here, amplicon sequencing refers to highly multiplexed PCR followed by high-throughput sequencing (e.g., GTseq), and sequence capture refers to using capture probes to isolate loci from reduced-representation libraries (e.g., Rapture). Both approaches allow sequencing of thousands of individuals at relatively low costs, do not require any specialized equipment for library preparation, and generate data that can be analyzed without sophisticated computational infrastructure. Here, we discuss the advantages and disadvantages of each method and provide a decision framework for geneticists who are looking to integrate these methods into their research programme. While it will always be important to consider the specifics of the biological question and system, we believe that amplicon sequencing is best suited for projects aiming to genotype <500 loci on many individuals (>1,500) or for species where continued monitoring is anticipated (e.g., long-term pedigrees). Sequence capture, on the other hand, is best applied to projects including fewer individuals or where >500 loci are required. Both of these techniques should smooth the transition from traditional genetic techniques to genomics, helping to usher in the conservation genomics era.

Molecular Ecology Resources↗

USGS2003

Distinguishing palagonitized from pedogenically-altered basaltic Hawaiian tephra: Mineralogical and geochemical criteria

Palagonitization is a common, but imperfectly defined process that greatly modifies the physical and chemical properties of glassy basaltic tephra deposited in subaquatic/subglacial environments on Earth and perhaps Mars. It also results in textures and mineralogies that are distinct from other forms of (mainly pedogenic) low temperature alteration. Specifically, the process of palagonitization (1) initially results in the formation of 'palaginitized glass', a quasi- or nano-crystalline, rind-like material that contains smectite, as well as lesser amounts of other clays (e.g. serpentine), and (2) eventually results in consolidation of tephra, mediated through the accretion of palagonitized glass and later- formed authigenic cements. Conversely, pedogenic weathering of glassy basaltic tephra is characterized by disaggregation of tephra, and formation of a wide range of pedogenic products, including layer silicates (although not primarily smectite), short-range-order aluminosilicates and oxyhydroxides, whose composition reflects the intensity of the weathering environment. These mineralogical and textural properties can be readily recognized through a variety of techniques including electron microscopy/microprobe analysis, reflectance spectroscopy, X-ray diffraction and soil chemistry. Analyses of samples collected from the summit regions of Kilauea and Mauna Kea volcanoes on the island of Hawaii are presented here in order to illustrate differences between palagonitization and pedogenic weathering of glassy basaltic tephra. In the young Hawaiian tephras studied, palagonitization has occurred in response to hydrothermal activity shortly after deposition. Although some, non-hydrothermally affected tephras may eventually become palagonitized, those that have been strongly desilicated by intense pedogenic weathering will probably never become palagonitized.

Geological Society Special Publication↗

USGS2014

Changes in vegetation and biological soil crust communities on sand dunes stabilizing after a century of grazing on San Miguel Island, Channel Island National Park, California

San Miguel Island is the westernmost of the California Channel Islands and one of the windiest areas on the west coast of North America. The majority of the island is covered by coastal sand dunes, which were stripped of vegetation and subsequently mobilized due to droughts and sheep ranching during the late 19th century and early 20th century. Since the removal of grazing animals, vegetation and biological soil crusts have once again stabilized many of the island's dunes. In this study, historical aerial photographs and field surveys were used to develop a chronosequence of the pattern of change in vegetation communities and biological soil crust levels of development (LOD) along a gradient of dune stabilization. Historical aerial photographs from 1929, 1954, 1977, and 2009 were georeferenced and used to delineate changes in vegetation canopy cover and active (unvegetated) dune extent among 5 historical periods (pre-1929, 1929–1954, 1954–1977, 1977–2009, and 2009–2011). During fieldwork, vegetation and biological soil crust communities were mapped along transects distributed throughout San Miguel Island's central dune field on land forms that had stabilized during the 5 time periods of interest. Analyses in a geographic information system (GIS) quantified the pattern of changes that vegetation and biological soil crust communities have exhibited on the San Miguel Island dunes over the past 80 years. Results revealed that a continuing increase in total vegetation cover and a complex pattern of change in vegetation communities have taken place on the San Miguel Island dunes since the removal of grazing animals. The highly specialized native vascular vegetation (sea rocket, dunedelion, beach-bur, and locoweed) are the pioneer stabilizers of the dunes. This pioneer community is replaced in later stages by communities that are dominated by native shrubs (coastal goldenbush, silver lupine, coyote-brush, and giant coreopsis), with apparently overlapping or cyclical succession pathways. Many of the dunes that have been stabilized the longest (since before 1929) are dominated by exotic grasses. Stands of biological soil crusts (cyanobacteria) are found only on dunes where vascular vegetation is already present. Biological soil crusts are not found on dunes exhibiting a closed vascular plant canopy, which may indicate that the role of soil crusts in dune stabilization on the island is transitory. Particle-size analyses of soil samples from the study area reveal that higher biological soil crust LOD is positively correlated with increasing fine grain content. The findings indicate that changes in vegetation communities may be the most rapid at earlier and later stages of dune stabilization and that regular monitoring of dunes may help to identify the interactions between vegetation and soil crusts, as well as the potential transitions between native and exotic plant communities.

California↗

USGS2003

The west-central Florida inner shelf and coastal system: A geologic conceptual overview and introduction to the special issue

This paper provides an overview for this special publication on the geologic framework of the inner shelf and coastal zone of west-central Florida. This is a significant geologic setting in that it lies at the center of an ancient carbonate platform facing an enormous ramp that has exerted large-scale control on coastal geomorphology, the availability of sediments, and the level of wave energy. In order to understand the Holocene geologic history of this depositional system, a regional study defined by natural boundaries (north end of a barrier island to the apex of a headland) was undertaken by a group of government and university coastal geologists using a wide variety of laboratory and field techniques. It is the purpose of this introductory paper to define the character of this coastal/inner shelf system, provide a historical geologic perspective and background of environmental information, define the overall database, present the collective objectives of this regional study, and very briefly present the main aspects of each contribution. Specific conclusions are presented at the end of each paper composing this volume. ?? 2003 Elsevier B.V. All rights reserved.

Marine Geology↗

USGS1994

Guidelines for collecting and processing samples of stream bed sediment for analysis of trace elements and organic contaminants for the National Water-Quality Assessment Program

A major component of the U.S. Geological Survey's National Water-Quality Assessment program is to assess the occurrence and distribution of trace elements and organic contaminants in streams. The first phase of the strategy for the assessment is to analyze samples of bed sediments from depositional zones. Fine-grained particles deposited in these zones are natural accumulators of trace elements and hydrophobic organic compounds. For the information to be comparable among studies in many different parts of the Nation, strategies for selecting stream sites and depositional zones are critical. Fine-grained surficial sediments are obtained from several depositional zones within a stream reach and composited to yield a sample representing average conditions. Sample collection and processing must be done consistently and by procedures specifically designed to separate the fine material into fractions that yield uncontaminated samples for trace-level analytes in the laboratory. Special coring samplers and other instruments made of Teflon are used for collection. Samples are processed through a 2.0-millimeter stainless-steel mesh sieve for organic contaminate analysis and a 63-micrometer nylon-cloth sieve for trace-element analysis. Quality assurance is maintained by strict collection and processing procedures, duplicate samplings, and a rigid cleaning procedure.

Open-File Report↗

USGS2022

Baseline gene expression levels in Falkland-Malvinas Island penguins: Towards a new monitoring paradigm

Health diagnostics of wildlife have historically relied on the evaluation of select serum biomarkers and the identification of a contaminant or pathogen burden within specific tissues as an indicator of a level of insult. However, these approaches fail to measure the physiological reaction of the individual to stressors, thus limiting the scope of interpretation. Gene-based health diagnostics provide an opportunity for an alternate, whole-system, or holistic assessment of health, not only in individuals or populations but potentially in ecosystems. Seabirds are among the most threatened marine taxonomic groups in the world, with ~25% of this species currently listed as threatened or considered of special concern; among seabirds, the penguins (Family Spheniscidae) are the most threatened seabird Family. We used gene expression to develop baseline physiological indices for wild penguins in the Falkland-Malvinas Islands, and captive zoo penguins. We identified the almost complete statistical separation of penguin groups (gentoo Detroit Zoo, gentoo Falkland-Malvinas Islands, rockhopper Detroit Zoo, and rockhopper Falkland-Malvinas Islands) based on gene expression profiles. Implementation of long-term longitudinal studies would allow for the assessment of temporal increases or decreases of select transcripts and would facilitate interpretation of the drivers of change.

Life↗

USGS1991

Techniques and strategies for data integration in mineral resource assessment

The Geologic and the National Mapping divisions of the U.S. Geological Survey have been involved formally in cooperative research and development of computer-based geographic information systems (GISs) applied to mineral-resource assessment objectives since 1982. Experience in the Conterminous United States Mineral Assessment Program (CUSMAP) projects including the Rolla, Missouri; Dillon, Montana; Butte, Montana; and Tonopah, Nevada 1?? ?? 2?? quadrangles, has resulted in the definition of processing requirements for geographically and mineral-resource data that are common to these studies. The diverse formats of data sets collected and compiled for regional mineral-resource assessments necessitate capabilities for digitally encoding and entering data into appropriate tabular, vector, and raster subsystems of the GIS. Although many of the required data sets are either available or can be provided in a digital format suitable for direct entry, their utility is largely dependent on the original intent and consequent preprocessing of the data. In this respect, special care must be taken to ensure the digital data type, encoding, and format will meet assessment objectives. Data processing within the GIS is directed primarily toward the development and application of models that can be used to describe spatially geological, geophysical, and geochemical environments either known or inferred to be associated with specific types of mineral deposits. Consequently, capabilities to analyze spatially, aggregate, and display relations between data sets are principal processing requirements. To facilitate the development of these models within the GIS, interfaces must be developed among vector-, raster-, and tabular-based processing subsystems to reformat resident data sets for comparative analyses and multivariate display of relations.

Conference Paper↗

USGS1973

A study of the distribution of the polychlorinated biphenyls in the aquatic environment

Data gathered from monitoring activities and project studies indicate the ubiquitous occurrence and distribution of polychlorinated biphenyls in the aquatic environment. Residues have been detected in samples from 19 States, representing nearly every region of the country. Concentrations ranged from 0.1 to 4.0 ug/l in unfiltered water samples and 5.0 to 3,200 ug/kg in bottom sediments. PCB residues were also found in fish and aquatic plants. Samples were prepared by the same techniques used for general chlorinated insecticide detection, with special attention to cleanup and separation of PCB's from other compounds. Basic identification and quantification were made by dual-column electron-capture gas chromatography and confirmed by gas chromatography mass spectrometry whenever possible. The sampling program is expected to be broadened geographically in 1973 and increased in successive years in order to more adequately define the distribution of PCB residues in the major drainage basins of the United States.

Journal of Research of the U.S. Geological Survey↗

USGS1953

A life history study of the yellow throat

Investigations concerning the life history of the Yellow-throat were made in southern Michigan during the spring and summer of 1938. Supplementary information was also obtained at Arlington, Virginia, in 1940 and at the Patuxent Research Refuge, Maryland, in 1947.....Resident males established territories almost immediately upon arrival in spring. In southern Michigan some resident males arrived at least as soon as, if not before, transient males. Most females appeared on their nesting ground about a week later. Adults were engaged in nesting activities from the time of their arrival in spring until the advent of the post-nuptial molt in late summer.....Typical Yellow-throat habitat consists of a mixture of a dense herbaceous vegetation and small woody plants in damp or wet situations. At Ann Arbor, the Yellow-throat was a common breeding species in its restricted suitable habitat. The population density in one area of suitable habitat was about 69 territorial males per 100 acres. Of 11 territorial males that were intensively studied, one was polygamous (with two mates), nine were monogamous, and one was probably monogamous (with at least one mate).....The song of the individual Yellow-throat was heard throughout the breeding season except for the courtship period. Two major types of song were the common song given while perched, and an occasional, more elaborate, flight song. Most males sing in spurts, singing at fairly regular intervals for a considerable period and then abruptly ceasing for another period. The vocabulary of both sexes included several types of call notes that appeared either to have special functions or to represent outward expressions of distinct emotional states of the bird.....Resident males were antagonistic toward each other throughout the breeding season. Most remained on well-established territories during this period. Territories of 10 monogamous males ranged in size from .8 to 1.8 acres but the territory of one polygamous male occupied. 3.4 acres. The behavior of males during inter-territorial encounters was similar in some respects to their behavior when courting females.....While courting females, the males are very attentive and seldom sing for about one week. During the courtship period the female locates the nesting site and builds the nest without assistance from the male.....Nests, constructed of dried plant materials, were situated on or near the ground and were supported on all sides by stems of herbaceous plants or limbs of shrubs. Many nests were composed of three layers with the coarser materials being used in the outer layer.....The full clutch of eggs in 12 nests ranged from 4 to 6 (average, 4.6). Early clutches seem to be larger than later ones. After the first egg is laid, one is laid on each succeeding day until the clutch is complete. Incubation period is about 12 days. Incubation is only by the female. Records of daytime incubation schedules of three females about half way through incubation indicate that the periods spent on and off the nests average about 61 and 16 minutes, respectively.....Young Yellow-throats usually remain in the nest for eight or nine days. During this period they grow and develop rapidly. Their weight quintuples in six days. Both sexes are active in feeding the young and in removing excreta from the nest. Records of feeding at three nests showed a range of one feeding per 5 1/2 minutes to one feeding per 22 minutes, the rate increasing with age of young. Adults care for the young for at least two weeks after the young leave the nest.....Ten of 12 females that were intensively studied were successful in raising young beyond the nestling stage. Only one of these raised two broods, although three females built at least three nests each. In 19 nests, 11 (58 per cent) produced nestlings and 7 (37 per cent) produced fledglings. In total, the 19 nests produced an average of one fledgling Yellow-throat per nest. Of 22 nests that were found near Ann Arbor, 10 (45

The Wilson Bulletin↗

USGS1955

A study of radioactivity in modern stream gravels and its possible application as a prospecting method

Traverses along some streams of the Colorado Plateau in areas known to contain minable uranium deposits show that anomalous radiation in the stream gravels can be detected with a suitable counter downstream from the deposits. The amount of radiation is influenced by the size of the uranium deposit, the size of the drainage area of the stream, the grain size of the sediments, and the lithology of the rocks over which the stream flows. The spacing of the stations where readings are taken is controlled by the size of the stream, and special readings are also taken directly downstream from important tributaries. An anomaly is empirically defined as a 10 percent rise over background. Radioactive material from large uranium deposits has been detected as much as 1 mile downstream. Radioactive material from smaller deposits is detachable over shorter distances. The method is slow but appears to be a useful prospecting tool under restricted conditions.

Colorado;Utah↗

USGS2009

One size does not fit all: Adapting mark-recapture and occupancy models for state uncertainty

Multistate capture?recapture models continue to be employed with greater frequency to test hypotheses about metapopulation dynamics and life history, and more recently disease dynamics. In recent years efforts have begun to adjust these models for cases where there is uncertainty about an animal?s state upon capture. These efforts can be categorized into models that permit misclassification between two states to occur in either direction or one direction, where state is certain for a subset of individuals or is always uncertain, and where estimation is based on one sampling occasion per period of interest or multiple sampling occasions per period. State uncertainty also arises in modeling patch occupancy dynamics. I consider several case studies involving bird and marine mammal studies that illustrate how misclassified states can arise, and outline model structures for properly utilizing the data that are produced. In each case misclassification occurs in only one direction (thus there is a subset of individuals or patches where state is known with certainty), and there are multiple sampling occasions per period of interest. For the cases involving capture?recapture data I allude to a general model structure that could include each example as a special case. However, this collection of cases also illustrates how difficult it is to develop a model structure that can be directly useful for answering every ecological question of interest and account for every type of data from the field.

Book chapter↗

USGS1992

Regional evaluations of acid deposition effects on forests: Eastern spruce-fir

Having reviewed the results of the Integrated Forest Study (IFS) project, we now try to place the results in a larger perspective by very briefly summarizing acid deposition effects and their potential role in forest health in the several forest types represented in the IFS project. This chapter gives brief overviews of the situation in eastern spruce-fir, eastern hardwood, and southern pine forests in North America; and a very brief overview of air pollution in arid forest ecosystems in Europe (with special emphasis on the situation in Norway where the single European IFS site was located). What follows in this chapter is by no means intended to be a comprehensive review of forest health and atmospheric deposition; such an analysis would require a volume of this size for each forest type and is well beyond the scope of this chapter. A comprehensive analysis of forest health and the role of atmospheric deposition has been published for Norway spruce in Europe (Schulze et al. 1989), and one is in preparation for red spruce (Eagar and Adams, in press); the reader is referred to those volumes for a far more detailed discussion than is possible here. The intent of this chapter is merely to highlight those aspects of forest health and atmospheric deposition that have bearing on, or that can be illuminated by, the IFS results.

Book chapter↗

USGS2014

Understanding thermodynamic relationships and geochemical mass balances from catchment to coast: A tribute to the life and career of Owen P. Bricker III

This special volume of aquatic geochemistry is dedicated to the memory of Owen Peterson Bricker III (1936–2011) and serves as a tribute to his life and career. Owen had a distinguished and productive research career in both academics at Johns Hopkins University (Fig. 1) and as a public servant with the Maryland Geological Survey, the US Environmental Protection Agency, and the US Geological Survey. He was a pioneer and leader in aqueous geochemistry, who applied a study approach that quantified mineral weathering reactions and equilibrium thermodynamic relations to better understand the chemical evolution of stream water in small watersheds. He will be especially remembered for his efforts to establish rigorous field studies in small catchments around the United States as a means of quantifying the sources of acid-neutralizing capacity that affect the chemical status and biological health of natural waters.

Aquatic Geochemistry↗

USGS2016

Establishing links between streamflow and ecological integrity in the Sudbury River (Northeastern U.S.)

With increased pressure from a growing human population, managers are challenged to understand how novel disturbances (e.g., climate change, increased water withdrawals, urbanization) may affect natural resources. The Sudbury River is a National Wild and Scenic River located in suburban Boston, Massachusetts (Northeastern US) with myriad impairments (e.g., mainstem impoundments, withdrawals, and urbanization) that is under increasing pressure from hydrologic alteration. We sampled fish, mussel, and macroinvertebrate assemblages in the Sudbury River and used species traits to investigate potential effects of past and future flow alteration on biota. Analysis of 33 years of stream gage data indicates continued hydrologic alteration of the Sudbury River, likely related to increased urbanization and water withdrawals over that time. These changes include a roughly 200% increase in rise rates of flows, an approximate 65% decrease in 1-day minimum flows, and a trend towards increasing high flow pulse counts. Biotic sampling in summer of 2014 demonstrated that the Sudbury River is now dominated by generalist species. Of five mussel species sampled, all are generalists in their habitat requirements. Though one mussel species of special concern was sampled, the most abundant species collected were the widespread Eastern elliptio (58%) and Eastern lampmussel (40%). We used the target fish community (TFC) model to assess the degree to which the fish assemblage deviated from that expected for a river with similar zoogeographic and physical features. Overall, the current community has a 22.7% similarity to the TFC. Of the four fluvial specialist species present in the TFC, only fallfish was sampled in our study. While the TFC showed that the historical assemblage was likely dominated by fluvial specialist and fluvial dependent species, the current assemblage is overwhelmingly dominated by macrohabitat generalists (90.6% of fishes sampled). These results are consistent with other studies that show shifts in assemblages from fluvial specialists to habitat generalists with hydrologic alteration. If the current trends continue, it is likely that biotic assemblages will experience increasing pressure from hydrologic alteration. While hydrologic alteration is likely impacting biotic assemblages in the Sudbury River, other factors such as high temperatures, low dissolved oxygen, high nutrients, low availability of high-quality habitat, and poor habitat connectivity may also be negatively impacting biotic assemblages. Comparisons to other rivers and a complete longitudinal habitat survey could help to identify availability of unique habitats and representativeness of this study. While this study suggests impacts of flow on biota, future studies with quantitative, habitat-specific sampling during different flow levels could help to directly identify links between hydrologic alteration and biotic impairment in the Sudbury River.

Massachussetts↗

USGS2002

Geographic information systems compilation of geophysical, geologic, and tectonic data for the Bering Shelf, Chukchi Sea, Arctic margin, and adjacent landmasses

The accompanying CD-ROM contains a compilation of geophysical, geologic, and tectonic data for the Bering Shelf, the Chukchi Sea, the Arctic margin, and adjacent landmasses. These data sets focus on Alaska, the Russian Far East, and the continental shelves that link these two landmasses. For compatibility with other available geographic information system (GIS) products, our GIS compilation extends from 120°E to 115°W, and from 40°N to 80°N. This area encompasses the region from the modern Paciµc plate boundary of the Japan, Kurile, and Aleutian subduction zones, the Queen Charlotte transform fault, and the Cascadia subduction zone (in the south) to the continent-ocean transition from the Eurasian and North American continents to the Arctic Ocean (in the north); and from the diffuse Eurasian–North American plate boundary, including the probable Okhotsk plate (in the west) to the Alaskan-Canadian Cordilleran fold belt (in the east). The CD-ROM comprises thematic layers of spatial data sets for topography, gravity µeld, magnetic µeld, earthquakes, volcanoes, geology, tectonostratigraphic terranes, and cultural reference features, and also includes metadata (data about the data) for all these data sets. The spatial data sets can be viewed, analyzed, and plotted with commercial GIS software (ArcView and ARC/Info) or through a freeware program (ArcExplorer) that is included on this CD-ROM. This GIS compilation provides data for studies of the Mesozoic and Cenozoic collisional and accretionary tectonics that assembled this continental crust and of the neotectonics of active and passive plate margins in this region, and for constructing and interpreting geophysical, geologic, and tectonic models of the region.

Alaska↗

USGS2003

Land use and land cover change in the Greater Yellowstone Ecosystem: 1975-1995

Shifts in the demographic and economic character of the Greater Yellowstone Ecosystem (GYE) are driving patterns of land cover and land use change in the region. Such changes may have important consequences for ecosystem functioning. The objective of this paper is to quantify the trajectories and rates of change in land cover and use across the GYE for the period 1975-1995 using satellite imagery. Spectral and geographic variables were used as inputs to classification tree regression analysis (CART) to find "rules" which defined land use and land cover classes on the landscape. The resulting CART functions were used to map land cover and land use across seven Landsat TM scenes for 1995. We then used a thresholding technique to identify locations that differed in spectral properties between the 1995 and 1985 time periods. These "changed" locations were classified using CART functions derived from spectral and geographic data from 1985. This was similarly done for the year 1975 based on Landsat MSS data. Differences between the 1975, 1985, and 1995 maps were considered change in land cover and use. We calibrated and tested the accuracy of our models using data acquired through manual interpretation of aerial photos. Elevation and vegetative indices derived from the remotely sensed satellite imagery explained the most variance in the land use and land cover classes (-i.e., defined the "rules" most often). Overall accuracies from our study were good, ranging from 94% at the coarsest level of detail to 74% at the finest. The largest changes over the study period were the increases in burned, urban, and mixed conifer-herbaceous classes and decreases in woody deciduous, mixed woody deciduous-herbaceous, and conifer habitats. These changes have important implications for ecological function and biodiversity. The expansion of mixed conifer classes may increase fuel loads and enhance risk to the growing number of rural homes. The reduction of woody deciduous cover types is likely reducing population sizes for the numerous plant and animal species that specialize on this habitat type. Some of these species are also negatively influenced by the increase of rural homes in and near woody deciduous habitats.

Idaho, Montana, Wyoming↗