USGS Science⌕ Search

SEARCH · USGS Science

Results for “Fisheries Research”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 703 records · Page 39Linked to original sources
USGS2010

Influences of acid mine drainage and thermal enrichment on stream fish reproduction and larval survival

Potential effects of acid mine drainage (AMD) and thermal enrichment on the reproduction of fishes were investigated through a larval-trapping survey in the Stony River watershed, Grant County, WV. Trapping was conducted at seven sites from 26 March to 2 July 2004. Overall larval catch was low (379 individuals in 220 hours of trapping). More larval White Suckers were captured than all other species. Vectors fitted to nonparametric multidimensional scaling ordinations suggested that temperature was highly correlated to fish communities captured at our sites. Survival of larval Fathead Minnows was examined in situ at six sites from 13 May to 11 June 2004 in the same system. Larval survival was lower, but not significantly different between sites directly downstream of AMD-impacted tributaries (40% survival) and non-AMD sites (52% survival). The lower survival was caused by a significant mortality event at one site that coincided with acute pH depression in an AMD tributary immediately upstream of the site. Results from a Cox proportional hazard test suggests that low pH is having a significant negative influence on larval fish survival in this system. The results from this research indicate that the combination of low pH events and elevated temperature are negatively influencing the larval fish populations of the Stony River watershed. Management actions that address these problems would have the potential to substantially increase both reproduction rates and larval survival, therefore greatly enhancing the fishery.

Northeastern Naturalist↗
USGS1975

History of fish toxicants in the United States

Many bodies of water have been overrun with fish species that are undesirable for the well-being of endemic aquatic biota and are of little or no interest to anglers. This situation has resulted from the transplanting of fish, creation of new waters, increasing fishing pressure and changing water quality. Although as many as 30 toxicants have been tried, only about 30 major piscicides have been used in rehabilitation programs to remove the unwanted species. Explicit knowledge of the mode of action of toxicants in the environment and improvements in fish farming, have permitted fishery managers to reduce the amount of control chemical that is applied to obtain a desired result. The number and volume of waters being reclaimed have increased, but this trend may change soon because environmental laws involving the use of registered pesticides are becoming more restrictive. Registration research has established the safety of some fish toxicants but has eliminated others. Only four piscicides are presently registered (or nonfood use application: antimycin and rotenone as general fish toxicants and 3-trifluoromethyl-4-nitrophenol (TFM) and Bayluscide as selective lampricides.

Special Publication↗
USGS2021

Estimates of food consumption rates for invasive Blue Catfish

As a prolific invasive species, Blue Catfish Ictalurus furcatus threaten native organisms in numerous estuarine and tidal freshwaters along the Atlantic coast of the United States. However, no published estimates of consumption rates are available for Blue Catfish in the scientific literature. This information is critical for development of bioenergetics models or estimation of population‐level impacts on native species. Using a combination of field and laboratory studies, we provide the first estimates of daily ration, maximum daily ration, and consumption to biomass ratios for Blue Catfish populations. Ad libitum feeding trials conducted in our laboratory reveal that maximum daily ration in Blue Catfish varies by prey type, temperature, and fish size, with maximal feeding occurring in medium‐sized Blue Catfish (500–600 mm total length) and at temperatures ≥15°C. Furthermore, estimates of daily ration were higher for fish prey (Gizzard Shad Dorosoma cepedianum ) than for crustacean prey (blue crab Callinectes sapidus ). Diel feeding chronologies based on field‐collected diet samples from 1,226 Blue Catfish demonstrated river‐specific variability in daily ration and maximum daily ration. Blue Catfish daily ration ranged between 2.27% and 5.22% bodyweight per 24 h, while maximum daily ration ranges between 8.56% and 9.37% bodyweight per 24 h. Estimates of consumption to biomass ratios varied by river and Blue Catfish size groupings but range between 2.42 and 3.39, which is similar to other benthic omnivores. This research will inform the assessment of predatory impacts of invasive Blue Catfish in the Chesapeake Bay and beyond as it will enable researchers to estimate predatory impacts through the coupling of population models, food habit information, and consumption rate information (current study).

Virginia↗
USGS2025

Growth patterns of invasive Silver Carp in the Mississippi River basin

Silver Carp ( Hypophthalmichthys molitrix ) are an invasive fish in the Mississippi River Basin. Their rapid expansion over recent decades coupled with extraordinary growth rates have arguably caught many by surprise. Understanding the atypical growth rates that could be the driving force behind the Silver Carp's explosive expansion may be crucial for development of management strategies. Towards this goal, I synthetized existing data on the growth and maturity patterns of Silver Carp. I compiled 62 estimates of growth representing populations of native Silver Carp in East Asia and invasive Silver Carp in the Mississippi River Basin. A remarkably rapid increase in length at earlier ages, undocumented in their ancestral range, was a defining feature of Silver Carp in the Mississippi River Basin. Some of the fastest growth rates of Silver Carp were recorded in hypereutrophic floodplain lakes and at lower latitudes. Invasive Silver Carp frequently deviated from the growth patterns established by native species as evidenced by abnormally high growth coefficients ( K ) in relation to asymptotic length ( L ∞ ). There is evidence of genetic differentiation between native Silver Carp and those expanding in the Mississippi River Basin possibly resulting from genetic background of introductions, genetic drift, and ecological selection. There is also limited evidence of enemy release, allowing for reallocation of energy from defenses to the rapid growth; though speculative, this is a plausible hypothesis that merits further research. This overview of the growth patterns of invasive Silver Carp underscores the need for novel strategies to mitigate the rapid generation time induced by the atypical growth patterns.

Mississippi River basin↗
USGS2022

Gill-net selectivity for fifteen fish species of the upper San Francisco Estuary

Gill-net size selectivity for 15 fish species occurring in the upper San Francisco Estuary was estimated from a data set compiled from multiple studies which together contained 7,096 individual fish observations from 882 gill net sets. The gill nets considered in this study closely resembled the American Fisheries Society’s recommended standardized experimental gill nets for sampling inland waters. Relationships between gill-net mesh sizes and the sizes for each fish species retained in them were estimated indirectly using generalized linear modeling and maximum likelihood. Selectivity curves are provided for each species to inform researchers about population characteristics of fishes sampled with similar gill nets.

California↗
USGS2009

FishTraits: a database of ecological and life-history traits of freshwater fishes of the United States

The need for integrated and widely accessible sources of species traits data to facilitate studies of ecology, conservation, and management has motivated development of traits databases for various taxa. In spite of the increasing number of traits-based analyses of freshwater fishes in the United States, no consolidated database of traits of this group exists publicly, and much useful information on these species is documented only in obscure sources. The largely inaccessible and unconsolidated traits information makes large-scale analysis involving many fishes and/or traits particularly challenging. We have compiled a database of > 100 traits for 809 (731 native and 78 nonnative) fish species found in freshwaters of the conterminous United States, including 37 native families and 145 native genera. The database, named Fish Traits, contains information on four major categories of traits: (1) trophic ecology; (2) body size, reproductive ecology, and life history; (3) habitat preferences; and (4) salinity and temperature tolerances. Information on geographic distribution and conservation status was also compiled. The database enhances many opportunities for conducting research on fish species traits and constitutes the first step toward establishing a central repository for a continually expanding set of traits of North American fishes.

Fisheries↗
USGS2006

Potential use of offshore marine structures in rebuilding an overfished rockfish species, bocaccio (Sebastes paucispinis)

Although bocaccio (Sebastes paucispinis) was an economically important rockfish species along the west coast of North America, overfishing has reduced the stock to about 7.4% of its former unfished population. In 2003, using a manned research submersible, we conducted fish surveys around eight oil and gas platforms off southern California as part of an assessment of the potential value of these structures as fish habitat. From these surveys, we estimated that there was a minimum of 430,000 juvenile bocaccio at these eight structures. We determined this number to be about 20% of the average number of juvenile bocaccio that survive annually for the geographic range of the species. When these juveniles become adults, they will contribute about one percent (0.8%) of the additional amount of fish needed to rebuild the Pacific Coast population. By comparison, juvenile bocaccio recruitment to nearshore natural nursery grounds, as determined through regional scuba surveys, was low in the same year. This research demonstrates that a relatively small amount of artificial nursery habitat may be quite valuable in rebuilding an overfished species.

California↗
USGS1981

Food of the Pacific white-sided dolphin, Lagenorhynchus obliquidens, Dall's porpoise, Phocoenoides dalli, and northern fur seal, Callorhinus ursinus, off California and Washington

Our knowledge of the feeding habits of the Pacific white-sided dolphin, Lagenorhynchus obliquidens , and the Dall's porpoise, Phocoenoides dalli , is based on examination of the stomach contents of stranded animals, animals accidentally taken in commercial fishing gear, those taken in the western Pacific commercial fishery, and animals that died during capture attempts. Of these only a few were normally feeding animals taken at sea, whose stomach contents were thoroughly examined. Fished and squids previously identified from stomachs of dolphins and porpoises by various investigators are listed in Table 1. This paper documents the stomach contents of 44 Pacific white-sided dolphin and 9 Dall's porpoise collected at sea off California and Washington. All animals were collected by the authors during pelagic fur seal studies with the exception of three dolphins which were collected by a staff biologist during whale research voyages off California. Comparisons of stomach contents are made between the Pacific white-sided dolphins, Dall's porpoise, and northern fur seal, Callorhinus ursinus , collected near the same locations and usually on the same day. Mention of the dolphin, porpoise , and seal in this paper refers to the above-named species unless noted otherwise.

California, Washington↗
USGS2019

It’s about time: A synthesis of changing phenology in the Gulf of Maine ecosystem

The timing of recurring biological and seasonal environmental events is changing on a global scale relative to temperature and other climate drivers. This study considers the Gulf of Maine ecosystem, a region of high social and ecological importance in the Northwest Atlantic Ocean and synthesizes current knowledge of 1) key seasonal processes, patterns, and events; 2) direct evidence for shifts in timing; 3) implications of phenological responses for linked ecological-human systems; and 4) potential phenology-focused adaptation strategies and actions. Twenty studies demonstrated shifts in timing of regional marine organisms and seasonal environmental events. The most common response was earlier timing, observed in spring onset, spring and winter hydrology, zooplankton abundance, and diadromous fish migrations. Later timing was documented for fall onset, reproduction and fledging in Atlantic puffins, spring and fall phytoplankton blooms, and occurrence of some larval fishes. Changes in event duration generally increased and were detected in zooplankton peak abundance, early life history periods of macro-invertebrates, and lobster fishery landings. Reduced duration was observed in winter-spring ice-affected stream flows. Two studies projected phenological changes, both finding diapause duration would decrease in zooplankton under future climate scenarios. Phenological responses were species-specific and varied depending on the environmental driver, spatial, and temporal scales evaluated. Overall, a wide range of baseline phenology and relevant modeling studies exist, yet surprisingly few document long-term shifts. Results reveal a need for increased emphasis on phenological shifts in the Gulf of Maine, identify opportunities for future research and consideration of phenological changes in adaptation efforts.

Maine↗
USGS2024

Cold blood in warming waters: Effects of air temperature, precipitation, and groundwater on Gulf Sturgeon thermal habitats in a changing climate

Objective In a changing climate, the effects of air temperature, precipitation, and groundwater on water temperature and thermal habitat suitability for Gulf Sturgeon Acipenser desotoi , listed as threatened under the U.S. Endangered Species Act, are not well understood. Hence, we incorporated these factors into thermal habitat models to forecast how Gulf Sturgeon may be affected by wide‐ranging climate change scenarios in 2024–2074. Methods Using data from the Choctawhatchee River, Florida, we developed precipitation‐ and groundwater‐corrected air–water temperature models, compared their accuracy with that of conventional air–water temperature models used in fisheries management, and projected future Gulf Sturgeon thermal habitat suitability for normal physiological functioning and fieldwork (i.e., population sampling and telemetry surgeries) in summer (May–August) under 16 climate change scenarios. Result Precipitation‐ and groundwater‐corrected models were more accurate than conventional air–water temperature models (mean improvement in adjusted R 2 = +0.45; range = +0.09 to +0.75). Water temperature was projected to warm at widely variable rates across climate change scenarios encompassing different air temperature, precipitation, and groundwater regimes. Importantly, Gulf Sturgeon summer aggregation areas were cooler and influenced more by precipitation and groundwater and less by air temperature than were non‐aggregation areas. If precipitation and groundwater—as drivers of cooling—become warm in a changing climate, summer aggregation areas were projected to exhibit thermal habitat degradation equivalent to or greater than that of non‐aggregation areas. Conclusion Our results add hydrological context to the premise that aggregation areas provide cool water and energetic savings for Gulf Sturgeon during summer, underscoring the importance of protecting these habitats through groundwater conservation, water quality monitoring, and riparian/watershed habitat management. Our findings indicate that identifying thermally appropriate times for fieldwork activities will be increasingly important and time‐restricted as climate change intensifies. However, our research provides managers with a portfolio of water temperature models and an accurate, cost‐effective, management‐relevant approach to forecasting thermal habitat conditions for Gulf Sturgeon and other species in a changing climate.

Alabama, Florida↗
USGS2011

Effects of introduced fishes on wild juvenile coho salmon in three shallow pacific northwest lakes

Declines in Pacific salmon Oncorhynchus spp. have been blamed on hydropower, overfishing, ocean conditions, and land use practices; however, less is known about the impacts of introduced fish. Most of the hundreds of lakes and ponds in the Pacific Northwest contain introduced fishes, and many of these water bodies are also important for salmon production, especially of coho salmon O. kisutch. Over 2 years, we examined the predation impacts of 10 common introduced fishes (brown bullhead Ameiurus nebulosus, black crappie Pomoxis nigro-maculatus, bluegill Lepomis macrochirus, golden shiner Notemigonus crysoleucas, green sunfish L. cyanellus, largemouth bass Micropterus salmoides, pumpkinseed L. gibbosus, rainbow trout O. mykiss, warmouth L. gulosus, and yellow perch Perca flavescens) and two native fishes (cutthroat trout O. clarkii and prickly sculpin Cottus asper) on wild juvenile coho salmon in three shallow Pacific Northwest lakes, all located in different watersheds. Of these species, largemouth bass were responsible for an average of 98% of the predation on coho salmon in all lakes, but the total impact to each run varied among lakes and years. Very few coho salmon were eaten by black crappies, brown bullheads, cutthroat trout, prickly sculpin, or yellow perch, whereas other species were not observed to eat coho salmon. Juvenile coho salmon growth in all lakes was higher than in nearby streams. Therefore, food competition between coho salmon and introduced fishes in lakes was probably not limiting coho salmon populations. Largemouth bass are widespread and are present in 85% of lowland warmwater public-access lakes in Washington (n = 421), 84% of those in Oregon (n = 179), and 74% of those in the eight northwesternmost counties in California (n = 19). Future research would help to identify the impact of largemouth bass predation across the region and prioritize lakes where impacts are most severe. Nevertheless, attempts to transplant or increase largemouth bass numbers in lakes important to coho salmon would be counterproductive to coho salmon enhancement efforts. ?? Copyright by the American Fisheries Society 2005.

Transactions of the American Fisheries Society↗
USGS2002

Degradation of marine ecosystems and decline of fishery resources in marine protected areas in the US Virgin Islands

The large number of marine protected areas (MPAs) in the Caribbean (over 100) gives a misleading impression of the amount of protection the reefs and other marine resources in this region are receiving. This review synthesizes information on marine resources in two of the first MPAs established in the USA, namely Virgin Islands National Park (1962) and Buck Island Reef National Monument (1961), and provides compelling evidence that greater protection is needed, based on data from some of the longest running research projects on coral reefs, reef fish assemblages, and seagrass beds for the Caribbean. Most of the stresses affecting marine resources throughout the Caribbean (e.g. damage from boats, hurricanes and coral diseases) are also causing deterioration in these MPAs. Living coral cover has decreased and macroalgal cover has increased. Seagrass densities have decreased because of storms and anchor damage. Intensive fishing in the US Virgin Islands has caused loss of spawning aggregations and decreases in mean fish size and abundance. Groupers and snappers are far less abundant and herbivorous fishes comprise a greater proportion of samples than in the 1960s. Effects of intensive fishing are evident even within MPA boundaries. Although only traditional fishing with traps of 'conventional design' is allowed, commercial trap fishing is occurring. Visual samples of fishes inside and outside Virgin Islands National 'Park showed no significant differences in number of species, biomass, or mean size of fishes. Similarly, the number of fishes per trap was statistically similar inside and outside park waters. These MPAs have not been effective because an unprecedented combination of natural and human factors is assaulting the resources, some of the greatest damage is from stresses outside the control of park managers (e.g. hurricanes), and enforcement of the few regulations has been limited. Fully functioning MPAs which prohibit fishing and other extractive uses (e.g. no-take marine reserves) could reverse some of the degradation, allowing replenishment of the fishery resources and recovery of benthic habitats.

Environmental Conservation↗
USGS2025

Evaluation of the acute toxicity of the piscicide TFM to Burbot

Non-target animal sensitivity remains a concern when treating Laurentian Great Lakes streams with 4-nitro-3-(trifluoromethyl)phenol (TFM), the main pesticide used to control Sea Lamprey Petromyzon marinus as part of the bi-national Great Lakes Fishery Commission's Sea Lamprey Control Program. Populations of Burbot Lota lota , a historically and culturally important fish, inhabit some of the streams that are treated with TFM. While many species of fish inhabiting the Great Lakes streams have been assessed for sensitivity to TFM, we are not aware of previous research to assess the risk to Burbot. We assessed the sensitivity of Burbot to TFM using replicate 12-hour flow-through diluter toxicity tests. We found Burbot to have a median lethal concentration (LC 50 ) of 9.74 mg/L, while the minimum lethal concentration (LC 99.9 ) for Sea Lamprey was predicted to be 2.5 mg/L in similar waters. The resulting toxicity ratio (LC 50 of non-target organism/LC 99.9 of Sea Lamprey) of Burbot was 3.90, well above the toxicity ratios for known sensitive species. Our results suggest Burbot are not expected to be adversely affected during a typical TFM stream treatment.

Great Lakes↗
USGS2013

Temporal changes and sexual differences in spatial distribution of Burbot in Lake Erie

We used GIS mapping techniques to examine capture data for Burbot Lota lota from annual gill-net surveys in Canadian waters of Lake Erie during late August and September 1994–2011. Adult males were captured over a larger area (3–17% for ≥20% maximum yearly catch [MYC]) than adult females. More males than females were caught in the gill nets in 14 of the 15 study years. Collectively, these results support a hypothesis of greater activity by adult males during summer, when Burbot are actively feeding. The area of capture contracted by more than 60% (for ≥20% MYC) for both sexes during the time period, which is consistent with the documented decrease of the Burbot population in the lake. The sex ratio (females: males) varied over the time series but declined steadily from 0.97 in 2001 to 0.59 in 2011. The overlap in the capture areas of adult males and females was scale dependent. The depth distribution at which adult Burbot were caught did not change over the time series, and there was no difference in the median depths (about 30 m) at which adult male and female Burbot were caught. The last results are consistent with the Burbot's reliance on coldwater habitats. Additional research is recommended, including telemetry to describe daily and seasonal movements and assessment of gender bias in active and passive capture gear.

Lake Erie↗
USGS2013

Evidence for density-dependent changes in growth, downstream movement, and size of Chinook salmon subyearlings in a large-river landscape

We studied the growth rate, downstream movement, and size of naturally produced fall Chinook Salmon Oncorhynchus tshawytscha subyearlings (age 0) for 20 years in an 8th-order river landscape with regulated riverine upstream rearing areas and an impounded downstream migration corridor. The population transitioned from low to high abundance in association with U.S. Endangered Species Act and other federally mandated recovery efforts. The mean growth rate of parr in the river did not decline with increasing abundance, but during the period of higher abundance the timing of dispersal from riverine habitat into the reservoir averaged 17 d earlier and the average size at the time of downstream dispersal was smaller by 10 mm and 1.8 g. Changes in apparent abundance, measured by catch per unit effort, largely explained the time of dispersal, measured by median day of capture, in riverine habitat. The growth rate of smolts in the reservoir declined from an average of 0.6 to 0.2 g/d between the abundance periods because the reduction in size at reservoir entry was accompanied by a tendency to migrate rather than linger and by increasing concentrations of smolts in the reservoir. The median date of passage through the reservoir was 14 d earlier on average, and average smolt size was smaller by 38 mm and 22.0 g, in accordance with density-dependent behavioral changes reflected by decreased smolt growth. Unexpectedly, smolts during the high-abundance period had begun to reexpress the migration timing and size phenotypes observed before the river was impounded, when abundance was relatively high. Our findings provide evidence for density-dependent phenotypic change in a large river that was influenced by the expansion of a recovery program. Thus, this study shows that efforts to recover native fishes can have detectable effects in large-river landscapes. The outcome of such phenotypic change, which will be an important area of future research, can only be fully judged by examining the effect of the change on population viability and productivity.

Idaho, Oregon, Washington↗
USGS2017

Implanting 8-mm passive integrated transponder tags into small Brook Trout: Effects on growth and survival in the laboratory

Passive integrated transponder (PIT) tags are commonly used to investigate relationships between individual fish and their environment. The recent availability of smaller tags has provided the opportunity to tag smaller fish. In this study, we implanted 8-mm PIT tags into small Brook Trout Salvelinus fontinalis (35–50 mm FL; 0.35–1.266 g) and compared tag retention, growth rates, and survival of PIT-tagged fish with those of fish subjected to handling only or to handling plus fin clipping. We also examined how initial size at tagging affected absolute and specific growth rates of PIT-tagged individuals over time. We found that survival was 100%, tag retention was 96.7%, and fish size did not vary across treatments at 29 and 64 d posttagging. Additionally, there was no evidence that growth rate (FL or mass) was influenced by the initial size of the fish that were PIT tagged. Our results indicate that retention rates of 8-mm PIT tags surgically implanted into small Brook Trout are high and that there is no discernible effect on growth or survival in the laboratory. The ability to implant smaller PIT tags into smaller fish earlier in the season would allow researchers conducting PIT tag studies to expand demographic models to estimate survival of age-0 fish through the summer of their first year.

North American Journal of Fisheries Management↗
USGS2019

Spatiotemporal variability in energetic condition of alewife and round goby in Lake Michigan

Pelagic-oriented alewife ( Alosa pseudoharengus ) and benthic-oriented round goby ( Neogobius melanostomus ) are two important prey fishes in the Laurentian Great Lakes. In 2015, we evaluated their seasonal total energy (TE) across nine Lake Michigan transects. Round goby contained at least 48% more kilojoules of TE than alewife of equal length during spring and summer. TE varied spatially for both species, but only large alewife exhibited a consistent pattern, with higher values along the eastern shoreline. Variation in TE was not explained by site-specific prey densities for either species. Round goby energy density (ED) was higher in Lake Michigan than in central Lake Erie, but comparable to other regions of the Great Lakes. Alewife ED in 2015 was similar to that in 2002–2004 in Lake Michigan, with the exception of November (small alewife ED was 21% higher) and April (large alewife ED was 30% lower). Despite oligotrophication, our study suggests that starvation of juvenile and adults has not been directly contributing to overall declining prey fish abundance, although future research should evaluate the potential for overwinter starvation.

Lake Michigan↗
USGS2022

Resource selection and species interactions between native and non-native fishes in a simulated stream system

Effective fishery management necessitates understanding of resource partitioning by fishes that inhabit complex systems composed of biotic and abiotic features. Evaluations of non-native species introductions have continually demonstrated adverse effects associated with abundance and distribution of native fishes. Therefore, understanding resource selection and interactions between native and non-native species is important for recovery efforts. Habitat use by two native fish species (largescale sucker Catostomus macrocheilus [Girard] and mountain whitefish Prosopium williamsoni [Girard]) and one non-native fish species (pumpkinseed Lepomis gibbosus [Linnaeus]) of the Kootenai River, Idaho, were evaluated in a laboratory stream system. Trials were conducted in allopatry and in sympatry with and without the presence of wood to describe habitat selection in the context of on-going habitat rehabilitation efforts. Interactions were evident between native largescale sucker and non-native pumpkinseed concerning use of a woody structure and current velocity. Mountain whitefish used low-velocity habitats and selected locations that were further from wood when in sympatry with pumpkinseed. Our research suggests that habitat use of native, large-river fishes may be influenced by the presence of a non-native species, and that considering such interactions is critical when designing and implementing habitat rehabilitation efforts in river ecosystems.

Fisheries Management and Ecology↗