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Chapter 6: Climate change, wildlife, and wildlife habitats in the Oregon Coast Range

Climate change is likely to have profound effects on wildlife species within the Oregon Coast Adaptation Partnership (OCAP) assessment area, although the direction and magnitude of effects are likely to vary across species. Increased mean and extreme temperatures, especially during summer, may cause shifts in plant and animal species ranges, reduce habitat for some temperature-sensitive wildlife, alter plant phenology and the timing of available food resources, and affect species interactions (e.g., predation, competition). Altered timing of precipitation, summer drought, loss of fog, increased flooding events, earlier snowmelt, and rising sea level may reduce plant productivity, increase tree mortality, shift plant species composition, and lead to reduced wildlife habitat and habitat quality for some forests, riparian areas, wetlands, meadows, estuaries, and beaches. In addition, increasing frequency and extent of wildfire and insect outbreaks may reduce the extent of late-successional forest, reduce habitat connectivity, and increase the spread of invasive species. The biggest change expected for the assessment area is an increase in area where climatic conditions favor coastal mixed forest and a large reduction in area favoring montane conifer forest. Although actual changes in forest types may not necessarily occur by the end of the 21st century, climate change may add physiological and behavioral stress to wildlife. Some wildlife species will be able to persist in place and adapt to new conditions; some may be able to migrate to find suitable habitat; and some may be greatly reduced or extirpated from the assessment area or even go extinct. Shifts in major tree and shrub species will play a major role in food, den, and cover availability for wildlife. Rising sea level will reduce low-elevation habitats along the coast. An increase in the frequency of high-severity weather events will increase frequency and magnitude of flooding, including debris flow events. Coupled with increased temperatures during summer, this may reduce or fragment important ecosystems for aquatic and semi-aquatic species. Evaluation of the vulnerabilities of nine wildlife species based on literature reviews suggests that each species has life-history attributes that can lead to resilience or vulnerability to climate change effects. Depending on long-term objectives, several broad adaptation strategies focus on protecting refugia, establishing redundant wildlife strongholds with large-scale connectivity, and promoting structural and biological complexity.

Oregon↗

Arsenic accumulation in Sonora Mud Turtles (Kinosternon sonoriense) in an unusual freshwater food web

Montezuma Well is an unusual fishless, spring-fed, desert wetland in central Arizona. Water in the wetland is naturally enriched with > 100 µg/l dissolved geogenic arsenic (As) and supports a simple aquatic food web dominated by a small number of endemic invertebrate species that achieve high abundances. Previous studies of As among various environmental compartments and organisms in Montezuma Well did not include omnivorous Sonora Mud turtles ( Kinosternon sonoriense ) despite their potential importance in the As cycle by virtue of their substantial biomass and role as top predators. We measured As concentrations in water, sediment, and organisms (macrophytes, amphipods, insects, leeches, and turtles) representing a range of trophic levels in order to document the importance of turtles at the apex of the Montezuma Well food web and in the As cycle. Concentrations of As in turtles varied according to tissue type. The greatest values (up to 26.77 mg/kg dry weight) were in the scutes of 1 of our oldest turtles (31.5 yrs). These elevated concentrations may be due to the affinity of As to react with sulfur in the keratin of scutes, and therefore might reflect duration of exposure in long-lived turtles. Although As concentrations generally tend to decrease when moving up to higher trophic levels in a food web, our results were different. Relatively elevated concentrations reported in sediments by us and a previous study declined in plant samples as expected. Amphipod concentrations increased but then decreased again in 3 of their invertebrate predators. Arsenic concentrations in endemic leeches were extremely elevated with a mean value of 72.2 mg/kg. The mean concentration of As in turtles was 7.08 mg/kg across tissue types and was greater than the plants or invertebrates they eat, with the notable exception of leeches, which have been proposed to be part of their diet.

Arizona↗

LANDFIRE 2001 and 2008 Refresh Geographic Area Report--Pacific Southwest

The LANDFIRE National project (LF_1.0.0) was successfully completed in 2009. The goal of LANDFIRE National was to generate consistent 2001 vintage 30 meter spatial data sets for all 50 states for fire and other natural resource applications. This report highlights results from the continuation of LANDFIRE as a program to update the spatial data layers through 2008. The focus of this phase of the program was to improve the data products and account for vegetation change across the landscape caused by wildland fire, fuel and vegetation treatments, and (or) management. In addition, changes caused by insects and disease, storms, invasive plants, and other natural or anthropogenic events were incorporated when appropriate data were available. This report describes the LANDFIRE 2001/2008 Refresh effort to update existing map layers to reflect more current conditions, focusing primarily on vegetation changes. The effort incorporated user feedback and new data, producing two comprehensive Refresh data product sets: 1. LANDFIRE 2001 Refresh (LF_1.0.5) enhanced LANDFIRE map layers by incorporating user feedback and additional data to provide a foundation to update data to 2008. It was also designed to provide users with a data set to help facilitate comparisons between 2001 and 2008 (i.e. Refresh LF_1.1.0) data sets. 2. LANDFIRE 2008 Refresh (LF_1.1.0) updated map layers to reflect vegetation changes and disturbances that occurred between 1999 and 2008. In this report, we (1) address the background and provide details pertaining to why there are two Refresh data sets, (2) explain the requirements, planning, and procedures behind the completion and delivery of the updated products for each of the data product sets, (3) show and describe results, and (4) provide case studies illustrating the performance of LANDFIRE National, LANDFIRE 2001 Refresh and LANDFIRE 2008 Refresh (LF_1.1.0) data products on some example wildland fires.

Report↗

Diet of juvenile and adult American Shad in the Columbia River

The diet of juvenile and adult American shad Alosa sapidissima captured from various locations in the Columbia River was investigated during 2007 and 2008. Collection efforts in 2007 were restricted to fish collected from existing adult and juvenile fish collection facilities located at Bonneville Dam and to adult shad captured by angling downstream from Bonneville Dam. In 2008, we used gillnets, electrofishing, beach seining, or cast nets to collect juvenile and adult shad from the saline estuary near Astoria (approximately river km 24) to just upstream from McNary Dam (approximately river km 472). We examined the stomach contents of 436 American shad captured in 2007 and 1,272 captured in 2008. Fish caught within the river were much more likely to contain food items than fish removed from fish collection facilities. The diet of age-0 American shad varied spatially and temporally, but was comprised primarily of crustaceans and insects. Prey diversity of age-0 American shad, as assessed by the Shannon Diversity Index, increased with decreasing distance to the estuary. Pre- and partial-spawn adult American shad primarily consumed Corophium spp. throughout the Columbia River; however, post-spawn adults primarily consumed gastropods upstream of McNary Dam.

Oregon, Washington↗

LANDFIRE 2001 and 2008 refresh: geographic area report: Alaska

The LANDFIRE National Project (LF_1.0.0) was successfully completed in 2009. The goal of LANDFIRE National was to generate consistent 2001 vintage 30 meter spatial data sets for all 50 States for fire and other natural resource applications. This report highlights results from the continuation of LANDFIRE as a program to update the spatial data layers through 2008. The focus of this phase of the program was to improve the data products and account for vegetation change across the landscape caused by wildland fire, fuel and vegetation treatments, and management. In addition, changes caused by insects and disease, storms, invasive plants, and other natural or anthropogenic events were incorporated when data were available. This report describes the LANDFIRE 2001/2008 Refresh effort to update existing map layers to reflect more current conditions, focusing primarily on vegetation changes. The effort incorporated user feedback and new data, producing two comprehensive Refresh data product sets: 1. LANDFIRE 2001 Refresh (LF_1.0.5) enhanced LANDFIRE map layers by incorporating user feedback and additional data to provide a foundation to update data to 2008. It was also designed to provide users with a data set to help facilitate comparisons between 2001 and 2008 (i.e. Refresh LF_1.1.0) data sets. 2. LANDFIRE 2008 Refresh (LF_1.1.0) updated map layers to reflect vegetation changes and disturbances that occurred between 1999 and 2008. In this report, we (1) address the background and provide details pertaining to why there are two Refresh data sets, (2) explain the requirements, planning, and procedures behind the completion and delivery of the updated products for each of the data product sets, (3) show and describe results, and (4) provide case studies illustrating the performance of LANDFIRE National, LANDFIRE 2001 Refresh and LANDFIRE 2008 Refresh (LF_1.1.0) data products on some example wildland fires.

Report↗

Volume V: Bulletin of the United States Geological and Geographical Survey of the Territories, 1879

The object of the present paper is to set forth some interesting biological facts relating to the gall-making Pemphiginre, and which were presented in abstract at the late meeting of the American Association for the Advancement of Science. These facts have a special interest just at this time on account of the close relation·ship between the insects of the sub-family in question and the notorious Grape-vine Phylloxera (Phylloxera vastatrix).

Report↗

Bulletin of the United States Geological and Geographical Survey of the Territories: Volume IV, Number 4

Table of Contents ART. XXXII.---The Fossil Insects of the Green River Shales. By Samuel H. Scudder, Cambridge, Mass.....747-776 ART. XXXIII.---Report on the Collection of Fishes made by Dr. Elllott Cones, U.S.A., in Dakota and Montana, during the seasons of 1873 and 1874. By DavidS. Jordan, M.D......777-800 ART. XXXIV.----Catalogue of Phraenogamous and Vascular Cryptogamous Plants collected during the summers of 1873 and 1874, in Dakota and Montana, along the forty-ninth parallel, by Dr. Elliott Cones, U.S.A.; with which are incorporated those collected in the same region at the same times by Mr. George M. Dawson. By Prof. J. W. Chickering.....801-830 ART. XXXV.-----On some Striking Products of Erosion in Colorado. By F.M. Endlich, S.N.D......831-864 ART. XXXVI.----Paleontological Papers No.8: Remarks upon the Laramie Group. By C.A. White, M.D......865-876 ART. XXXVII.---Synonymatic List of the American Sciuri, or Arboreal Squirrels. By J.A. Allen. (See p. 905.).....877-887 Index.....889-908

Report↗

Water quality in the Puget Sound basin, Washington and British Columbia, 1996-98

Puget Sound basin streams during 1995-98 met most guidelines and criteria. Seventy-four manmade compounds were detected and different mixtures linked to land use. Urban expansion into forested areas is changing stream habitats--urban and agricultural streams are warmer and support less diverse insect populations than streams in forested areas. Elevated nitrate concentrations and the presence of manmade organic compounds indicated shallow ground water in urban and agricultural settings is vulnerable to contamination.

Circular↗

Broad-scale response of landbird migration to the immediate effects of Hurricane Katrina

It was the midst of songbird migration season when Hurricane Katrina hit the Louisiana coast in 2005. Typically these birds fatten up in Gulf Coast river bottomland forest for the long flight to Central and South America. After Katrina stripped plants of leaves, fruits, and insects in the fertile bottomlands of the Pearl River, weather radar indicated that migrant birds increased their use of adjacent pine woodlands.

Circular↗

Bat Rabies and Other Lyssavirus Infections

Bat Rabies and Other Lyssavirus Infections offers readers an overview of the virus variants that cause bat rabies, and geographical patterns in occurrence of this disease. The section Species Susceptibility describes infection rates and trends among bats, humans, and other animals. Disease Ecology considers the biological and environmental dynamics of the disease in various species of bats. Points to Ponder: Interspecies Interactions in Potential Bat Rabies Transmission Settings discusses the narrowing interface of bat colonies and human society and how humans and domestic animals play a role in transmission of bat rabies. Disease Prevention and Control outlines how to limit exposure to rabid bats and other animals. Appendixes include extensive tables of reported infections in bat species and in humans, and a glossary of technical terms is included. The author, Denny G. Constantine, helped define rabies infection in insect-eating bats and has investigated bat rabies ecology for more than half a century. He has authored more than 90 papers during the course of his career and is widely considered to be the world's foremost authority on the disease. Currently, Dr. Constantine is a public health officer emeritus and veterinary epidemiologist for the California Department of Health Services Viral and Rickettsial Disease Laboratory. Milt Friend, first director of the USGS National Wildlife Health Center, wrote the foreword. David Blehert, a USGS microbiologist who is investigating the emergence and causes of bat white-nose syndrome, edited the volume. Bat Rabies is intended for scholars and the general public. Dr. Constantine presents the material in a simple, straightforward manner that serves both audiences. The goal of the author is to increase people's understanding of both bat and disease ecology and also provide a balanced perspective on human risks pertaining to bat rabies.

Circular↗

U.S. Geological Survey—Energy and wildlife research annual report for 2017

Introduction Terrestrial and aquatic ecosystems provide valuable services to humans and are a source of clean water, energy, raw materials, and productive soils. The Nation’s food supply is more secure because of wildlife. For example, native pollinators enhance agricultural crops, and insect-eating bats provide pest control services worth billions of dollars to farmers annually. Fish and wildlife are also vital to a vibrant outdoor recreation and tourism industry. Recreational activities, such as hunting, shooting, boating, and angling, generated \$1.1 billion in excise taxes paid to State wildlife agencies in 2017. National parks, wildlife refuges, and monuments accounted for $35 billion in economic output and 318,000 jobs nationwide in 2016. Additional economic benefits are generated from the use and enjoyment of wildlife in State-owned lands and waters. Although the United States is rich in natural resources, human activity continues to place new pressures on fish and wildlife and the habitats they rely on. The United States became the world’s top producer of petroleum and natural gas products in 2012, surpassing Russia’s natural gas production levels in 2009 and Saudi Arabia’s petroleum production in 2013. The U.S. Energy Information Administration projects that the demand for liquid fuel, natural gas, and renewable energy will show strong growth in the next 20 years. Wind energy has demonstrated consistent growth since 2007 with now more than 53,000 wind turbines contributing to power grids in 41 States, Guam, and Puerto Rico. Solar energy has seen rapid growth since 2013 and made up nearly one-third of the total electricity generation additions in 2016. Yet as our Nation works to advance energy security and sustain wildlife, some conflicts have surfaced. Impacts of an expanding energy infrastructure include fragmentation and loss of habitat as well as mortality of birds, bats, fish, and other animals from interactions with energy generation facilities. Because energy development can often occur in wildlife habitats, ecological science can help guide project siting and operational decisions to areas that present the lowest risk to wildlife and energy developers. To address these challenges and make the most of new opportunities, the U.S. Geological Survey is producing innovative science to develop workable solutions that can help sustain wildlife and the habitat they rely upon, while allowing informed development.

Circular↗

Identification of bees in southwest Idaho—A guide for beginners

This document was prepared to help scientists and the public, both of whom may not be familiar with bee taxonomy, learn how to practically identify bees in sagebrush steppe and shrubland habitats in southwest Idaho. We provide information to identify bees to the level of family and genus. A tentative list of the bee genera captured at sites used for insect community studies is included.

Idaho↗

The USGS Abandoned Mine Lands Initiative: Protecting and restoring the environment near abandoned mine lands

The Abandoned Mine Lands (AML) Initiative is part of a larger strategy of the U.S. Department of the Interior and the U.S. Department of Agriculture to clean up Federal lands contaminated by abandoned mines. Thousands of abandond hard-rock metal mines (such as gold, copper, lead, and zinc) have left a dual legacy across the Western United States. They reflect the historic development of the west, yet at the same time represent a possible threat to human health and local ecosystems. Abandoned Mine Lands (AML) are areas adjacent to or affected by abandoned mines. AML's often contain unmined mineral deposits, mine dumps (the ore and rock removed to get to the ore deposits), and tailings (the material left over from the ore processing) that contaminate the surrounding watershed and ecosystem. For example, streams near AML's can contain metals and (or) be so acidic that fish and aquatic insects cannot live in them. Many of these abandoned hard-rock mines are located on or adjacent to public lands administered by the Bureau of Land Management, National Park Service, and U.S. Forest Service. These federal land management agencies and the USGS are committed to mitigating the adverse effects that AML's can have on water quality and stream habitats. The USGS AML Initiative began in 1997 and will continue through 2001 in two pilot watersheds - the Boulder River basin in southwestern Montana and the upper Animas River basin in southwestern Colorado. The USGS is providing a wide range of scientific expertise to help land managers minimize and, where possible, eliminate the adverse environmental effects of AML's. USGS ecologists, geologists, water quality experts, hydrologists, geochemists, and mapping and digital data collection experts are collaborating to provide the scientific knowledge needed for an effective cleanup of AML's.

Arizona, California, Colorado, Idaho, Montana, New↗

Assessment of stream quality using biological indices at selected sites in the Schuylkill River basin, Chester County, Pennsylvania, 1981-97

Introduction In 1970, the Chester County Water Resources Authority (Pennsylvania) and the U.S. Geological Survey (USGS) established a long-term water-quality network with the goal of assessing the quality of streams in the county and understanding stream changes in response to urbanization using benthic-macroinvertebrate data. This database represents one of the longest continuous water-quality data sets in the country. Benthic macroinvertebrates are aquatic insects, such as mayflies, caddisflies, riffle beetles, and midges, and other invertebrates that live on the stream bottom. Benthic macroinvertebrates are useful in evaluating stream quality because their habitat preferences and low motility cause them to be affected directly by substances that enter the aquatic system. By evaluating the diversity and community structure of benthic-macroinvertebrate populations, a determination of stream quality can be made. Between 1981 and 1997, the network consisted of 43 sites in 5 major basins in Chester County—Delaware, Schuylkill, Brandywine, Big Elk and Octoraro, and Red and White Clay. Benthic-macroinvertebrate, water-chemistry, and habitat data were collected each year in October or November during base-flow conditions. Using these data, Reif evaluated the overall water-quality condition of Chester County streams. This Fact Sheet summarizes the key findings from Reif for streams in the Schuylkill River Basin. These streams include Pigeon Creek (site 10), Stony Run (site 6), French Creek (sites 12-16), Pickering Creek (sites 1-5), Little Valley Creek (site 49), and Valley Creek (site 50). This summary includes an analysis of stream conditions based on benthic-macroinvertebrate samples and an analysis of trends in stream conditions for the 17-year study period.

Fact Sheet↗

Assessment of stream quality using biological indices at selected sites in the Big Elk and Octoraro Creek basins, Chester County, Pennsylvania, 1981-97

Introduction In 1970, the Chester County Water Resources Authority (Pennsylvania) and the U.S. Geological Survey (USGS) established a long-term water-quality network with the goal of assessing the quality of streams in the county and understanding stream changes in response to urbanization using benthic-macroinvertebrate data. This database represents one of the longest continuous water-quality data sets in the country. Benthic macroinvertebrates are aquatic insects, such as mayflies, caddisflies, riffle beetles, and midges, and other invertebrates that live on the stream bottom. Benthic macroin-vertebrates are useful in evaluating stream quality because their habitat preference and low motility cause them to be affected directly by substances that enter the aquatic system. By evaluating the diversity and community structure of benthic-macroinvertebrate populations, a determination of stream quality can be made. Between 1981 and 1997, the water-quality network consisted of 43 sites in 5 major basins in Chester County—Delaware, Schuylkill, Brandywine, Big Elk and Octoraro, and Red and White Clay. Benthic-macroinvertebrate, water-chemistry, and habitat data were collected each year in October or November during base-flow conditions. Using these data, Reif evaluates the overall water-quality condition of Chester County streams. This Fact Sheet summarizes the key findings from Reif for streams in the Big Elk and Octoraro Creek Basins. These streams include East Branch Big Elk Creek (site 31), West Branch Big Elk Creek (site 32), East Branch Octoraro Creek (site 33) and Valley Creek (site 34). This summary includes an analysis of stream conditions based on benthic-macroinvertebrate samples and an analysis of trends in stream conditions for the 17-year study period.

Fact Sheet↗

Assessment of stream quality using biological indices at selected sites in the Delaware River basin, Chester County, Pennsylvania, 1981-97

Introduction In 1970, the Chester County Water Resources Authority (Penn-sylvania) and the U.S. Geological Survey (USGS) established a long-term water-quality network with the goal of assessing the quality of streams in the county and understanding stream changes in response to urbanization using benthic-macroinvertebrate data. This database represents one of the longest continuous water-quality data sets in the country. Benthic macroinvertebrates are aquatic insects, such as mayflies, caddisflies, riffle beetles, and midges, and other invertebrates that live on the stream bottom. Benthic macroinvertebrates are useful in evaluating stream quality because their habitat preferences and low motility cause them to be affected directly by substances that enter the aquatic system. By evaluating the diversity and community structure of benthic-macroinvertebrate populations, a determination of stream quality can be made. Between 1981 and 1997, the water-quality network consisted of 43 sites in 5 major basins in Chester County—Delaware, Schuylkill, Brandywine, Big Elk and Octoraro, and Red and White Clay. Benthic-macroinvertebrate, water-chemistry, and habitat data were collected each year in October or November during base-flow condition. Using these data, Reif evaluates the overall water-quality condition of Chester County streams. This Fact Sheet summarizes the key findings from Reif for streams in the Delaware River Basin. These streams include Darby Creek (site 17), Crum Creek (site 19), Ridley Creek (sites 20 and 21), East Branch Chester Creek (sites 22-24, and 51), and Goose Creek (site 25). This summary includes an analysis of stream conditions on the basis of benthic-macroinvertebrate samples and an analysis of trends in stream conditions for the 17-year study period.

Fact Sheet↗

Assessment of stream quality using biological indices at selected sites in the Brandywine Creek basin, Chester County, Pennsylvania, 1981-97

In 1970, the Chester County Water Resources Authority (Pennsylvania) and the U.S. Geological Survey (USGS) established a longterm water-quality network with the goal of assessing the quality of streams in the county and understanding stream changes in response to urbanization using benthic-macroinvertebrate data. This database represents one of the longest continuous water-quality data sets in the country. Benthic macroinvertebrates are aquatic insects, such as mayflies, caddisflies, riffle beetles, and midges, and other invertebrates that live on the stream bottom. Benthic macroinvertebrates are useful in evaluating stream quality because their habitat preferences and low motility cause them to be affected directly by substances that enter the aquatic system. By evaluating the diversity and community structure of benthic-macroinvertebrate populations, a determination of stream quality can be made. Between 1981 and 1997, the water-quality network consisted of 43 sites in 5 major basins in Chester County—Delaware, Schuylkill, Brandywine, Big Elk and Octoraro, and Red and White Clay. Benthicmacroinvertebrate, water-chemistry, and habitat data were collected each year in October or November during base-flow conditions. Using these data, Reif evaluated the overall water-quality condition of Chester County streams. This Fact Sheet summarizes the key findings from Reif for streams in the Brandywine Creek Basin. These streams include West Branch Brandywine Creek (sites 37 and 38), Buck Run (site 46), Doe Run (site 45), East Branch Brandywine Creek (sites 48, 42, 36, and 39), Indian Run (site 47), West Valley Creek (site 44), and Main Stem Brandywine Creek (site 40). This summary includes an analysis of stream conditions based on benthic-macroinvertebrate samples and an analysis of trends in stream conditions for the 17-year study period.

Fact Sheet↗

Assessment of stream quality using biological indices at selected sites in the Red Clay and White Clay Creek basins, Chester County, Pennsylvania, 1981-97

In 1970, the Chester County Water Resources Authority (Pennsylvania) and the U.S. Geological Survey (USGS) established a long-term water-quality network with the goal of assessing the quality of streams in the county and understanding stream changes in response to urbanization using benthic-macroinvertebrate data. This database represents one of the longest continuous water-quality data sets in the country. Benthic macroinvertebrates are aquatic insects, such as mayflies, caddisflies, riffle beetles, and midges, and other invertebrates that live on the stream bottom. Benthic macroinvertebrates are useful in evaluating stream quality because their habitat preference and low motility cause them to be affected directly by substances that enter the aquatic system. By evaluating the diversity and community structure of benthic-macroinvertebrate populations, a determination of stream quality can be made. Between 1981 and 1997, the water-quality network consisted of 43 sites in 5 major basins in Chester County—Delaware, Schuylkill, Brandywine, Big Elk and Octoraro, and Red and White Clay. Benthicmacroinvertebrate, water-chemistry, and habitat data were collected each year in October or November during base-flow conditions. Using these data, Reif evaluates the overall water-quality condition of Chester County streams. This Fact Sheet summarizes the key findings from Reif for streams in the Red Clay and White Clay Creek Basins. These streams include East Branch Red Clay Creek (site 26), West Branch Red Clay Creek (site 27), East Branch White Clay Creek (site 28), the Middle Branch White Clay Creek (site 29), and West Branch White Clay Creek (site 30). This summary includes an analysis of stream conditions on the basis of benthic-macroinvertebrate samples and an analysis of trends in stream conditions for the 17-year study period.

Pennsylvania↗