USGS Science⌕ Search

SEARCH · USGS Science

Results for “Freshwater Biology”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 685 records · Page 38Linked to original sources
USGS2017

Can ozone be used to control the spread of freshwater Aquatic Invasive Species?

The introduction of aquatic invasive species to non-native habitats can cause negative ecological effects and also billions of dollars in economic damage to governments and private industries. Once aquatic invasive species are introduced, eradication may be difficult without adversely affecting native species and habitats, urging resource managers to find preventative methods to protect non-invaded areas. The use of ozone (O 3 ) as a non-physical barrier has shown promise as it is lethal to a wide range of aquatic taxa, requires a short contact time, and is relatively environmentally safe in aquatic systems when compared to other chemicals. However, before O 3 can be considered as an approach to prevent the spread of aquatic invasive species, its effects on non-target organisms and already established aquatic invasive species must be fully evaluated. A review of the current literature was conducted to summarize data regarding the effects of O 3 on aquatic taxa including fish, macroinvertebrates, zooplankton, phytoplankton, microbes, and pathogens. In addition, we assessed the practicality of ozone applications to control the movement of aquatic invasive species, and identified data gaps concerning the use of O 3 as a non-physical barrier in field applications.

Management of Biological Invasions↗
USGS2017

An evaluation of silver-stage American Eel conspecific chemical cueing during outmigration

American Eel Anguilla rostrata abundance has declined in recent decades, in part because sexually maturing, silver-stage adults, outmigrating from freshwater to oceanic spawning grounds, encounter migratory blockades or perish when passing through active hydroelectric turbines. To help improve downstream passage effectiveness and increase survival rates, the role of silver-stage American Eel conspecific chemical cueing during outmigration was investigated using a new type of bioassay. Inside a laboratory flume, downstream-swimming eels were exposed to both live (putative attractant) and dead (putative repellent) conspecific washings to determine whether their trajectory of downstream movement, level of activity, or time spent inside targeted areas of the arena changed after exposure. Silver eels were not attracted to or repulsed by either odor, as none of five scoring metrics indicated a behavioral response. Results did not support the hypothesis that conspecific chemical cueing is a mechanism for downstream migration coordination or danger avoidance; however responses may not have been readily apparent in this type of assay. Fisheries managers may opt to focus future research on more feasible restoration efforts using alternate experimental designs to remedy this ecological issue.

Environmental Biology of Fishes↗
USGS2013

Thermal tolerance of meltwater stonefly Lednia tumana nymphs from an alpine stream in Waterton–Glacier International Peace Park, Montana, USA

Global climate change threatens to affect negatively the structure, function, and diversity of aquatic ecosystems worldwide. In alpine systems, the thermal tolerances of stream invertebrates can be assessed to understand better the potential effects of rising ambient temperatures and continued loss of glaciers and snowpack on alpine stream ecosystems. We measured the critical thermal maximum (CTM) and lethal temperature maximum (LTM) of the meltwater stonefly ( Lednia tumana ), a species limited to glacial and snowmelt-driven alpine streams in the Waterton–Glacier International Peace Park area and a candidate for listing under the US Endangered Species Act. We collected L. tumana nymphs from Lunch Creek in Glacier National Park, Montana (USA) and transported them to a laboratory at the University of Montana Flathead Lake Biological Station, Polson, Montana. We placed nymphs in a controlled water bath at 1 of 2 acclimation temperatures, 8.5 and 15°C. We increased water temperature at a constant rate of 0.3°C/min. We calculated the average CTM and LTM (± SD) for each acclimation temperature and compared them with Student’s t-tests. Predicted chronic temperature maxima were determined using the ⅓ rule. Mean LTMs were 32.3 ± 0.28°C and 31.05 ± 0.78°C in the 8.5 and 15°C acclimation treatments, respectively. CTM and LTM metrics were lower in the 15 than in the 8.5°C acclimation treatment, but these differences were not statistically significant (p > 0.05). The predicted chronic temperature maxima were 20.6 and 20.2°C for the 8.5 and 15°C acclimation treatments, respectively. More research is needed on the effects of chronic exposures to rising stream temperatures, but our results can be used to assess the potential effects of warming water temperatures on L. tumana and other aquatic macroinvertebrates in alpine ecosystems.

Montana↗
USGS2022

Stream macroinvertebrate reintroductions: A cautionary approach for restored urban streams

Macroinvertebrate assemblages often remain depauperate in physically restored urban streams despite efforts to improve habitat conditions and increase species abundance and diversity. The lack of biological recovery may be due to a lack of a natural, nearby source of colonists, and this has inspired researchers and practitioners to reintroduce macroinvertebrates in otherwise restored urban streams to jump start the recovery process. However, without standardized guidelines that describe reintroduction best practices, some reintroduction programs may create additional problems (e.g., disease spread, genetic homogenization, population loss). To reduce these risks and limit a potential waste of resources, a cautionary approach is warranted. In this paper we summarize current stream reintroduction knowledge and detail best practices for aquatic macroinvertebrate reintroduction in restored urban streams. We provide criteria that managers can use to determine whether reintroduction is appropriate and demonstrate how researchers can use reintroduction as a tool to test hypotheses regarding factors limiting recolonization. We provide guidance for how to set clear reintroduction goals, select donor sites, determine the number of organisms required, establish reintroduction frequency and timing, and overcome challenges associated with monitoring. This framework can help managers create more successful reintroduction programs that can benefit urban stream restoration.

Freshwater Science↗
USGS2014

Development of intestinal ion-transporting mechanisms during smoltification and seawater acclimation in Atlantic salmon Salmo salar

This study investigated the expression of ion transporters involved in intestinal fluid absorption and presents evidence for developmental changes in abundance and tissue distribution of these transporters during smoltification and seawater (SW) acclimation of Atlantic salmon Salmo salar . Emphasis was placed on Na + , K + -ATPase (NKA) and Na + , K + , Cl − co-transporter (NKCC) isoforms, at both transcriptional and protein levels, together with transcription of chloride channel genes. The nka α1c was the dominant isoform at the transcript level in both proximal and distal intestines; also, it was the most abundant isoform expressed in the basolateral membrane of enterocytes in the proximal intestine. This isoform was also abundantly expressed in the distal intestine in the lower part of the mucosal folds. The protein expression of intestinal Nkaα1c increased during smoltification. Immunostaining was localized to the basal membrane of the enterocytes in freshwater (FW) fish, and re-distributed to a lateral position after SW entry. Two other Nka isoforms, α1a and α1b , were expressed in the intestine but were not regulated to the same extent during smoltification and subsequent SW transfer. Their localization in the intestinal wall indicates a house-keeping function in excitatory tissues. The absorptive form of the NKCC-like isoform (sub-apically located NKCC2 and/or Na + , Cl − co-transporter) increased during smoltification and further after SW transfer. The cellular distribution changed from a diffuse expression in the sub-apical regions during smoltification to clustering of the transporters closer to the apical membrane after entry to SW. Furthermore, transcript abundance indicates that the mechanisms necessary for exit of chloride ions across the basolateral membrane and into the lateral intercellular space are present in the form of one or more of three different chloride channels: cystic fibrosis transmembrane conductance regulator I and II and chloride channel 3.

Journal of Fish Biology↗
USGS2019

Wetlands and development influence fish diversity in a species-rich small river

We identified in-stream and off-stream characteristics that influenced various species diversity metrics in reaches of the Duck River Basin, Tennessee, USA. This relatively small basin is home to one of the most diverse freshwater fish faunas in North America. In all, over 325,000 native fish representing 136 native fish species were electrofished in 207 collections across 86 stations. Diversity of native species and of seven taxa and functional guilds, including imperiled species, increased with size of the catchment above a station, an effect that was mediated by altitude. After removing the effects of catchment and altitude, diversity was influenced by in-stream factors and mostly by off-stream land composition such as wetlands within 0.1 km from the channel and urban/suburban development within 2.5 km. Pastures next to streams unexpectedly increased diversity. Our analyses suggest that there are detectable hotspots associated with off-stream landscape characteristics where conservation efforts may be focused. Our results may encourage conservation planners to apply geospatial analyses to identify diversity hotspots based on land cover distributions and develop recommendations for management of specific stream reaches. Alternatively, geospatial analysis may be used by planners to estimate the impacts of alternative land-use scenarios, thus preemptively conserving species richness.

Tennessee↗
USGS2018

Energy allocation and feeding ecology of juvenile chum salmon (Oncorhynchus keta) during transition from freshwater to saltwater

Pacific salmon (Oncorhynchus spp.) populations near their northern range extent in the Arctic-Yukon-Kuskokwim region of Alaska have undergone major changes in population trajectory and illuminated the lack of basic information on juvenile ecology. This study fills information gaps on the early life history of chum salmon at northern latitudes. Energy allocation was examined in the context of distribution, feeding intensity, and diet during a critical life history period for a single cohort of juvenile chum salmon (O. keta) as they transition from freshwater to saltwater in Kuskokwim Bay from mid-May to early June. Juvenile chum salmon were primarily captured in the river mouth and plume. Energy density (kJ g−1 dry mass) was related to fork length, timing (day-of-year), and capture location in a general additive model. The smallest fish had slightly higher energy densities, but the change in energy density with fish size was minimal and consistent with allocating energy toward somatic growth rather than lipid storage. Fish captured earlier had higher energy density, likely reflecting the presence of residual yolk lipids during early migration. Fish captured in the river mouth and plume had higher energy densities. Feeding intensity was highest among small fish captured later within the river plume. Diet was dominated by surface prey (insects and calanoid copepods) rather than epibenthic harpacticoid copepods as commonly observed. These results provide the first data on energy allocation of juvenile chum salmon during a critical life history phase and suggest that somatic growth is prioritized over storing lipid at saltwater entry.

Alaska↗
USGS2005

Alternative life histories shape brain gene expression profiles in males of the same population

Atlantic salmon (Salmo salar) undergo spectacular marine migrations before homing to spawn in natal rivers. However, males that grow fastest early in life can adopt an alternative 'sneaker' tactic by maturing earlier at greatly reduced size without leaving freshwater. While the ultimate evolutionary causes have been well studied, virtually nothing is known about the molecular bases of this developmental plasticity. We investigate the nature and extent of coordinated molecular changes that accompany such a fundamental transformation by comparing the brain transcription profiles of wild mature sneaker males to age-matched immature males (future large anadromous males) and immature females. Of the ca. 3000 genes surveyed, 15% are differentially expressed in the brains of the two male types. These genes are involved in a wide range of processes, including growth, reproduction and neural plasticity. Interestingly, despite the potential for wide variation in gene expression profiles among individuals sampled in nature, consistent patterns of gene expression were found for individuals of the same reproductive tactic. Notably, gene expression patterns in immature males were different both from immature females and sneakers, indicating that delayed maturation and sea migration by immature males, the 'default' life cycle, may actually result from an active inhibition of development into a sneaker. ?? 2005 The Royal Society.

Proceedings of the Royal Society B: Biological Sci↗
USGS2011

Variability in expression of anadromy by female Oncorhynchus mykiss within a river network

We described and predicted spatial variation in marine migration (anadromy) of female Oncorhynchus mykiss in the John Day River watershed, Oregon. We collected 149 juvenile O. mykiss across 72 sites and identified locations used by anadromous females by assigning maternal origin (anadromous versus non-anadromous) to each juvenile. These assignments used comparisons of strontium to calcium ratios in otolith primordia and freshwater growth regions to indicate maternal origin. We used logistic regression to predict probability of anadromy in relation to mean annual stream runoff using data from a subset of individuals. This model correctly predicted anadromy in a second sample of individuals with a moderate level of accuracy (e.g., 68% correctly predicted with a 0.5 classification threshold). Residuals from the models were not spatially autocorrelated, suggesting that remaining variability in the expression of anadromy was due to localized influences, as opposed to broad-scale gradients unrelated to mean annual stream runoff. These results are important for the management of O. mykiss because anadromous individuals (steelhead) within the John Day River watershed are listed as a threatened species, and it is difficult to discern juvenile steelhead from non-anadromous individuals (rainbow trout) in the field. Our results provide a broad-scale description and prediction of locations supporting anadromy, and new insight for habitat restoration, monitoring, and research to better manage and understand the expression of anadromy in O. mykiss .

Oregon↗
USGS2004

Investigations of a large scale eared grebe (Podiceps nigricollis) die-off at the Salton Sea, California in 1992

An estimated 150,000 Eared Grebes (Podiceps nigricollis) died at the Salton Sea between 16 December 1991 and 21 April 1992. This represented the largest documented mortality event of Eared Grebes at the time and approximately 6% of the North American population. During the die-off, grebes exhibited several uncharacteristic behaviors, such as congregating at freshwater tributaries, repeatedly gulping freshwater, preening excessively, moving onto land, and allowing close approach and/or capture. Avian cholera was diagnosed in Eared Grebes collected along the north and west shoreline of the Sea late in the die-off but not from the majority of the Eared Grebes dying along the south shore. Gross and histological examinations and diagnostic testing for viruses, bacteria, and parasites did not identify the cause of mortality in the majority of Eared Grebes examined from the south shore of the Sea. Liver concentrations of arsenic, chromium, DDE, mercury, selenium, and zinc were elevated in some Eared Grebes, but none of those contaminants exceeded known thresholds for independent lethality. Poisoning by heavy metals, organochlorine, organophosphorus, or carbamate pesticides, avian botulism, and salt were ruled out as the cause of mortality. Hypotheses for the die-off are interactive effects of contaminants, immunosuppression, a yet unidentified biotoxin or pathogen present in the Salton Sea, impairment of feather waterproofing leading to hypothermia, or a unique manifestation of avian cholera that evades laboratory detection.

California↗
USGS2020

Effects of stormwater runoff from selected bridge decks on conditions of water, sediment, and biological quality in receiving waters in South Carolina, 2013 to 2018

The U.S. Geological Survey, in cooperation with the South Carolina Department of Transportation, investigated the effects of stormwater runoff from bridge decks on stream water quality conditions in South Carolina. The investigation assessed 5 bridges in 3 physiographic provinces in South Carolina (Piedmont, Upper Coastal Plain, and Lower Coast Plain) that had a range of bridge, traffic, and hydrologic characteristics. The five selected South Carolina bridge sites (coincident with U.S. Geological Survey stations) and corresponding highways were Lynches River at Effingham (station 02132000; U.S. Highway 52), North Fork Edisto River at Orangeburg (station 02173500; U.S. Highway 301), Turkey Creek above Huger (station 02172035; South Carolina Highway 41), South Fork Edisto River near Denmark (station 02173000; U.S. Highway 321), and Fishing Creek at Highway 5 below York (station 021473415; South Carolina Highway 5). Bridge decks at the selected sites used open chutes, scuppers, and downspouts to drain stormwater directly into the receiving water at evenly spaced intervals. Stream water, sediment, and biological samples were collected and analyzed for a variety of constituents to evaluate the stream conditions for this study. Five to six stream samples were collected at transects upstream and downstream from each selected bridge site using the equal-width-increment technique during observable stormwater runoff. Routine samples of the receiving waters were collected 12 to 14 times at the upstream transect during nonstorm conditions. Samples were analyzed for physical properties, suspended sediment, nutrients, major ions, trace metals, polycyclic aromatic hydrocarbons, and Escherichia coli . Bridge-deck sediment and streambed sediment at upstream and downstream transects were collected once at each bridge site and analyzed for metals and semivolatile organic compounds that include polycyclic aromatic hydrocarbons. Benthic macroinvertebrate community surveys were conducted once using Hester-Dendy multiplate artificial substrate samplers deployed at multiple upstream and downstream transects concurrently. Statistical analysis of the water-quality data determined that stormwater runoff from bridges did not significantly degrade physical properties, nor nutrient, trace-metal, Escherichia coli , and suspended-sediment concentrations at the selected sites beyond the variability at the upstream transect (no bridge influence) during the study period. During storm sampling at the bridge sites, water-quality conditions were statistically similar upstream and downstream from each bridge, except for greater turbidity, total nitrogen, and total organic nitrogen plus ammonia concentrations found downstream from the bridge site on Fishing Creek; higher total chromium concentrations detected downstream from the bridge site on Turkey Creek; and increased Escherichia coli concentrations found downstream from the bridge site on the North Fork Edisto River. Total recoverable lead, cadmium, and copper concentrations were the only trace metals that periodically exceeded the South Carolina Department of Health and Environmental Control freshwater aquatic-life criteria at some bridge sites (lead, copper, and cadmium in Turkey Creek; cadmium and lead in Fishing Creek; lead in the South Fork Edisto River and Lynches River), but the exceedances occurred more frequently during routine sampling upstream from the bridge sites than during storm sampling at upstream and downstream transects. In general, stormwater runoff from the bridge decks did not seem to be the major source of metal enrichment in receiving waters during the study period. North Fork and South Fork Edisto Rivers and Turkey Creek had only one storm sample that exceeded South Carolina Department of Health and Environmental Control recreational criterion for Escherichia coli at both the upstream and downstream locations, while Fishing Creek had more frequent exceedances. Polycyclic aromatic hydrocarbons were detected infrequently in the stream samples. In general, sediment trace-metal concentrations were below the threshold and probable effect concentration at all bridge sites, except for the chromium concentration (45.1 milligrams per kilogram) detected upstream from the bridge site on Fishing Creek that exceeded the threshold effect concentration of 43.4 milligrams per kilogram. Based on enrichment ratios less than 1.5, bridge-deck runoff did not seem to be affecting trace-metal accumulation in the streambed sediment downstream from the bridge sites, except for lead at the bridge site on the Lynches River and manganese at the bridge site on Fishing Creek. Individual polycyclic aromatic compound concentrations and the sum of 18 compounds did not exceed any threshold and probable effect concentrations, indicating polycyclic aromatic hydrocarbon concentrations in the streambed sediment at downstream and upstream transects were not likely to affect the health of benthic macroinvertebrate communities. Although the cumulative polycyclic aromatic hydrocarbon concentrations in downstream sediment at the sites on Turkey and Fishing Creeks were well below the threshold effect concentration of 1,610 micrograms per kilogram, the 3- to 100-fold increase in downstream concentrations indicated a strong probability of a bridge-deck runoff source. Overall, benthic macroinvertebrate community health downstream from the bridge sites did not seem to be affected by bridge-deck runoff based on several multivariate analyses that indicated statistically similar benthic macroinvertebrate communities at upstream and downstream transects. Of the five bridge sites in this study, the site on Turkey Creek seemed to have the least healthy benthic macroinvertebrate communities because of the lowest Ephemeroptera, Plecoptera, and Trichoptera spp. (mayflies, stoneflies, and caddisflies, respectively) taxa, species richness, and diversity; and the highest biotic indices, indicative of poorer ecological health, at upstream and downstream transects. This ecological finding was not unexpected because of seasonal periods of negligible flow when dissolved-oxygen concentrations fell below 4 milligrams per liter during the study period. Of the five bridge sites in this study, the site on the South Fork Edisto River seemed to have healthier benthic macroinvertebrate communities because of the greater mean Ephemeroptera, Plecoptera, and Trichoptera spp. taxa; and lower mean biotic indices at upstream and downstream transects.

Scientific Investigations Report↗
USGS2018

Molecular and morphometric analyses reveal cryptic diversity within freshwater mussels (Bivalvia: Unionidae) of the western Gulf coastal drainages of the USA

Past geological processes and climate change affected current species distributions and the genetic structure of riverine fauna. Western Gulf of Mexico coastal rivers harbour four mussel species within the genus Fusconaia (Bivalvia: Unionida). The distributions of these species are unclear owing to their indistinguishable shell morphologies. Using molecular phylogenetic and Fourier morphometric analyses, we examined phylogenetic relationships and morphological variation among the species and made inferences about the role of past geological and climatic factors in shaping the current genetic structure and distributions of these species in the region. Our results showed the presence of three Fusconaia species within the region: Fusconaia askewi , Fusconaia chunii and Fusconaia flava . We confirmed that Fusconaia lananensis is a junior synonym of F. askewi and that F. chunii is genetically distinct from F. askewi . The Trinity River has syntopic F. flava whose morphologies are indistinguishable from those of F. chunii . Divergence-time estimates matched major geological and climatic events in the region, where climate-driven river formations during the mid-Miocene to Pleistocene caused major diversification of Fusconaia species. Knowledge gained from the present study provides a better understanding of vicariant events that shaped current species distributions and helps to identify conservation priorities that apply to the Fusconaia species.

Biological Journal of the Linnean Society↗
USGS2023

Shrinking body size and climate warming: Many freshwater salmonids do not follow the rule

Declining body size is believed to be a universal response to climate warming and has been documented in numerous studies of marine and anadromous fishes. The Salmonidae are a family of coldwater fishes considered to be among the most sensitive species to climate warming; however, whether the shrinking body size response holds true for freshwater salmonids has yet to be examined at a broad spatial scale. We compiled observations of individual fish lengths from long-term surveys across the Northern Hemisphere for 12 species of freshwater salmonids and used linear mixed models to test for spatial and temporal trends in body size (fish length) spanning recent decades. Contrary to expectations, we found a significant increase in length overall but with high variability in trends among populations and species. More than two-thirds of the populations we examined increased in length over time. Secondary regressions revealed larger-bodied populations are experiencing greater increases in length than smaller-bodied populations. Mean water temperature was weakly predictive of changes in body length but overall minimal influences of environmental variables suggest that it is difficult to predict an organism's response to changing temperatures by solely looking at climatic factors. Our results suggest that declining body size is not universal, and the response of fishes to climate change may be largely influenced by local factors. It is important to know that we cannot assume the effects of climate change are predictable and negative at a large spatial scale.

Global Change Biology↗
USGS2022

Fish diversity reduction and assemblage structure homogenization in lakes: A case study on unselective fishing in China

Unselective fishing involves activities that target the entire assemblage rather than specific fish species, size classes, or trophic levels. This common fishing approach has been in practice for decades in inland waters in China but its implications for biodiversity remain unclear. We addressed this issue by studying fish assemblages in freshwater lakes (five fishing lakes, one reference lake, and a total of 51 sampling sites) between pre- and post-fishing time-periods in Eastern China during 2017–2019. The effects of lake, fishing period, and their interactions on fish abundance, biomass, and diversity indices were assessed. Multivariate analysis was conducted to test for differences in fish assemblages among lakes and between fishing periods. After the implementation of fishing activities, significant reductions in fish species richness, abundance, biomass, and all three life-history strategies (opportunistic, equilibrium, and periodic) were observed in fishing lakes, whereas opposite trends were observed in the reference lake. Compositional similarity of fish assemblages among fishing lakes increased over the three-year monitoring period. Our results suggest that unselective fishing reduces fish diversity and homogenizes fish assemblage structure in lakes. These findings have important implications for protecting both biodiversity and fisheries in inland waters in China and are applicable to other countries or regions that rely on fish as a major food source.

Water Biology and Security↗
USGS2013

Relating hyporheic fluxes, residence times, and redox-sensitive biogeochemical processes upstream of beaver dams

Abstract. Small dams enhance the development of patchy microenvironments along stream corridors by trapping sediment and creating complex streambed morphologies. This patchiness drives intricate hyporheic flux patterns that govern the exchange of O 2 and redox-sensitive solutes between the water column and the stream bed. We used multiple tracer techniques, naturally occurring and injected, to evaluate hyporheic flow dynamics and associated biogeochemical cycling and microbial reactivity around 2 beaver dams in Wyoming (USA). High-resolution fiber-optic distributed temperature sensing was used to collect temperature data over 9 vertical streambed profiles and to generate comprehensive vertical flux maps using 1-dimensional (1-D) heat-transport modeling. Coincident with these locations, vertical profiles of hyporheic water were collected every week and analyzed for dissolved O 2 , pH, dissolved organic C, and several conservative and redox-sensitive solutes. In addition, hyporheic and net stream aerobic microbial reactivity were analyzed with a constant-rate injection of the biologically sensitive resazurin (Raz) smart tracer. The combined results revealed a heterogeneous system with rates of downwelling hyporheic flow organized by morphologic unit and tightly coupled to the redox conditions of the subsurface. Principal component analysis was used to summarize the variability of all redox-sensitive species, and results indicated that hyporheic water varied from oxic-stream-like to anoxic-reduced in direct response to the hydrodynamic conditions and associated residence times. The anaerobic transition threshold predicted by the mean O 2 Damko ¨hler number seemed to overestimate the actual transition as indicated by multiple secondary electron acceptors, illustrating the gradient nature of anaerobic transition. Temporal flux variability in low-flux morphologies generated a much greater range in hyporheic redox conditions compared to high-flux zones, and chemical responses to changing flux rates were consistent with those predicted from the empirical relationship between redox condition and residence time. The Raz tracer revealed that hyporheic flow paths have strong net aerobic respiration, particularly at higher residence time, but this reactive exchange did not affect the net stream signal at the reach scale.

Freshwater Science↗
USGS2007

Prey resources before spawning influence gonadal investment of female, but not male, white crappie

In this study, an outdoor pool experiment was used to evaluate the effect of prey resources during 4 months before spawning on the gonadal investments of male and female white crappie Pomoxis annularis , a popular freshwater sportfish that exhibits erratic recruitment. Fish were assigned one of three feeding treatments: starved, fed once every 5 days (intermediate) or fed daily (high). All measurements of male testes ( i.e. wet mass, energy density and spermatocrit) were similar across treatments. Conversely, high-fed females produced larger ovaries than those of intermediate-fed and starved fish, and invested more energy in their ovaries than starved fish. Compared to pre-experiment fish, starved and intermediate-fed females appeared to increase their ovary size by relying on liver energy stores (‘capital’ spawning). Conversely, high-fed females increased liver and gonad mass, implying an ‘income’-spawning strategy (where gonads are built from recently acquired energy). Fecundity did not differ among treatments, but high-fed fish built larger eggs than those starved. Females rarely ‘skipped’ spawning opportunities when prey resources were low, as only 8% of starved females and 8% of intermediate-fed females lacked vitellogenic eggs. These results suggest that limited prey resources during the months before spawning can limit ovary production, which, in turn, can limit reproductive success of white crappies.

Journal of Fish Biology↗
USGS2009

Habitat requirements of the endangered California freshwater shrimp (Syncaris pacifica) in lagunitas and Olema creeks, Marin County, California, USA

This study was conducted to better understand the habitat requirements and environmental limiting factors of Syncaris pacifica, the California freshwater shrimp. This federally listed endangered species is native to perennial lowland streams in a few watersheds in northern California. Field sampling occurred in Lagunitas and Olema creeks at seasonal intervals from February 2003 to November 2004. Ten glides, five pools, and five riffles served as fixed sampling reaches, with eight glides, four pools, and four riffles located in Lagunitas Creek and the remainder in Olema Creek. A total of 1773 S. pacifica was counted during this study, all of which were captured along vegetated banks in Lagunitas Creek. Syncaris pacifica was most numerous in glides (64), then in pools (31), and lastly in riffles (5). According to logistic regression analysis, S. pacifica was mostly associated with submerged portions of streambank vegetation (especially overhanging vegetation such as ferns and blackberries, emergent vegetation such as sedge and brooklime, and fine roots associated with water hemlock, willow, sedge, and blackberries) along with low water current velocity and a sandy substrate. These seemingly favorable habitat conditions for S. pacifica were present in glides and pools in Lagunitas Creek, but not in Olema Creek. ?? 2009 The Crustacean Society.

Journal of Crustacean Biology↗
USGS2020

Turtle biogeography: Global regionalization and conservation priorities

Defaunation in the Anthropocene has created a need to focus limited conservation resources on geographically-explicit areas with high conservation significance. Priority conservation areas are often defined as those with high biodiversity – hotspots. While these conservation areas are critical to securing global biodiversity, prevailing approaches for their delineation are often qualitative. Here, we demonstrate the benefits of a clade-specific approach that improves conservation. We use the distinct, imperiled clade of turtles (tortoises and freshwater turtles) to delineate biogeographical regions and characterize their comparative levels of biodiversity and conservation values. We produce a quantitative, revisable map of 63 global turtle regions and identify several turtle regions, mostly in the Indomalayan turtle realm, that are high-priority conservation regions. While our high-priority turtle regions include those previously reported in the literature as turtle hotspots, we also describe a new priority conservation region in Southeast Asia (Yangtze-Huang He-Xi Yiang) which has both high species and endemism richness. Although not considered a high or intermediate conservation priority, our analyses delineated another previously unidentified turtle hotspot – the Kalahari Basin-Rift Valley. Additionally, we identify several turtle regions, largely in Central America, with intermediate conservation priority. Our results reveal that many turtle hotspots represent complex biogeographical areas with high inter-regional β -diversity, and several of these turtle-hotspots occur in transition zones with high biogeographical complexity. In these cases, inter-regional conservation efforts will be necessary to ensure turtle biodiversity conservation.

Biological Conservation↗