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USGS2023

Satellite tracking reveals use of Biscayne National Park by sea turtles tagged in multiple locations

Although historical observations date back to the 1800’s, there is little information on sea turtle occupancy within Biscayne National Park (BNP). The park is located along the Florida reef tract and is dominated by the Gulfstream, which acts as a corridor for many marine animals. Here we used satellite telemetry to determine areas of use in BNP for two species of imperiled sea turtles, loggerhead ( Caretta caretta ) and green ( Chelonia mydas ) turtles. We included data for turtles tagged between 2009–2021 at sites both within park waters and in five locations outside the park boundary; individuals were captured both in the water and on land. We tagged 60 individuals (female, n = "> = 48; male, n = "> = 3; immature, n = "> = 9); loggerheads (n = "> = 33) ranged in size from 66.2 to 109.9 cm CCL (curved carapace length) and green turtles (n = "> = 27) ranged in size from 39.1 to 111.9 cm CCL. We used behavioral switching state-space modeling (SSM) to obtain daily predicted positions for each turtle, classified turtle behavior within the park as either foraging, migration, or both foraging and migration, and summarized high-use areas for each species across all months of the year. Turtles used park waters year-round, with concentrated use of deeper waters during seasonal migrations. Across all 60 turtles, 21 spent their tracking time foraging within BNP boundaries and 30 used the park as part of their migratory pathway; five turtles used the park for both foraging and migration, and the remaining four had SSM points very close to the park. Loggerhead migration occurred from February through November, whereas green turtle migration was concentrated in August. Both turtle species exhibited high overlap (i.e., usage) with seagrass habitat. These findings are relevant as managers consider strategies to minimize anthropogenic impacts to resident and migratory sea turtles using park waters.

Florida↗

USGS2017

Analysis of trends of water quality and streamflow in the Blackstone, Branch, Pawtuxet, and Pawcatuck Rivers, Massachusetts and Rhode Island, 1979 to 2015

Trends in long-term water-quality and streamflow data from six water-quality-monitoring stations within three major river basins in Massachusetts and Rhode Island that flow into Narragansett Bay and Little Narragansett Bay were evaluated for water years 1979–2015. In this study, conducted by the U.S. Geological Survey in cooperation with the Rhode Island Department of Environmental Management, the Rhode Island Water Resources Board, and the U.S. Environmental Protection Agency, water-quality and streamflow data were evaluated with a Weighted Regressions on Time, Discharge, and Season smoothing method, which removes the effects of year-to-year variation in water-quality conditions due to variations in streamflow (discharge). Trends in annual mean, annual median, annual maximum, and annual 7-day minimum flows at four continuous streamgages were evaluated by using a time-series smoothing method for water years 1979–2015. Water quality at all monitoring stations changed over the study period. Decreasing trends in flow-normalized nutrient concentrations and loads were observed during the period at most monitoring stations for total nitrogen, nitrite plus nitrate, and total phosphorus. Average flow-normalized loads for water years 1979–2015 decreased in the Blackstone River by up to 46 percent in total nitrogen, 17 percent in nitrite plus nitrate, and 69 percent in total phosphorus. The other rivers also had decreasing flow-normalized trends in nutrient concentrations and loads, except for the Pawtuxet River, which had an increasing trend in nitrite plus nitrate. Increasing trends in flow-normalized chloride concentrations and loads were observed during the study period at all of the rivers, with increases of more than 200 percent in the Blackstone River. Small increasing trends in annual mean daily streamflow were observed in 3 of the 4 rivers, with increases of 1.2 to 11 percent; however, the trends were not significant. All 4 rivers had decreases in streamflow for the annual 7-day minimums, but only 3 of the 4 rivers had decreases that were significant (34 to 54 percent). The Branch River had decreasing annual mean daily streamflow (7.5 percent) and the largest decrease in the annual 7-day minimum streamflow. The Blackstone and Pawtuxet Rivers had the largest increases in annual maximum daily flows but had decreases in the annual 7-day minimum flows.

Massachusetts, Rhode Island↗

USGS2021

Precipitation-runoff processes in the Merced River Basin, Central California, with prospects for streamflow predictability, water years 1952–2013

The U.S. Geological Survey, in cooperation with the California Department of Water Resources (DWR), has constructed a new spatially detailed Precipitation-Runoff Modeling System (PRMS) model for the Merced River Basin, California, which is a tributary of the San Joaquin River in California. Operated through an Object User Interface (OUI) with Ensemble Streamflow Prediction (ESP) and daily climate distribution preprocessing functionality, the model is calibrated primarily to simulate (and eventually, forecast) year-to-year variations of inflows to Lake McClure during the critical April–July snowmelt season. The model is intended to become part of a suite of methods used by DWR for estimating daily streamflow from the Merced River Basin, especially during the snowmelt season. This study describes the results of the application of an analysis tool that simulates responses to climate and land-use variations at a higher spatial resolution than previously available to DWR. A geographic information system was used to delineate the model domain, that is, areas draining to a single outlet at U.S. Geological Survey streamflow-gaging station 11270900, Merced River below Merced Falls Dam, near Snell, CA (also known as California Data Exchange Center station MRC), and subdrainage areas, including four draining to internal gages used as calibration targets. Using this delineation, three contiguous subbasins were recognized and, along with the model domain and nested calibration targets, are the simulation units evaluated in this report. An auto-calibration tool, LUCA (Let Us CAlibrate), was used for each calibration node, from headwaters to basin outlet, and then parameters were manually adjusted to complete the calibration. The main objective was to match April–July snowmelt seasonal discharge values of simulated streamflow to observed (measured or reconstructed) discharge values. Calibration or validation periods used site-specific streamflows—mostly from October 1, 1988, through September 30, 2013—but differed according to the period-of-record available for the measurements collected at internal gages or reconstructed flows for the single outlet. The accuracy of the Merced PRMS streamflow simulations varied seasonally, as compared to observed values. Based on statistical results, the Merced PRMS model satisfactorily simulated snowmelt seasonal streamflows. April–July calibrations for all areas had small negative bias (not greater than 7 percent) and low relative error (less than 8 percent). Less satisfactory performance for other seasons was attributed to several factors: (1) high uncertainty in low or zero flows in summer and fall, (2) lack of accounting for basin withdrawals and anthropogenic water use, (3) unavailability and (or) inaccuracy of observed (measured) meteorological input data, and (4) uncertainty in reconstructed streamflow data. With some additional refinement, the Merced PRMS model may be used for forecasting seasonal and longer-term streamflow variations; evaluating forecasted and past climate and land cover changes; providing water-resource managers with a consistent and documented method for estimating streamflow at ungaged sites within the basin; and aiding environmental studies, hydraulic design, water management, and water-quality projects in the Merced River Basin.

California↗

USGS1997

Herbicide concentrations in and loads transported by the Conestoga River and Pequea Creek, Lancaster County, Pennsylvania, 1992-95

Water samples were collected from four streams in Lancaster County from 1992 through 1995 and analyzed for selected herbicides. Samples were collected from the Little Conestoga Creek near Churchtown, Mill Creek (a tributary to the Conestoga River) at Elshelman Mill Road near Lyndon, the Conestoga River at Conestoga, and Pequea Creek at Martic Forge. Most samples were collected from stormflow that occurred during the growing season. Samples were analyzed for alachlor, aldrin, atrazine, chlordane, cyanazine, dieldrin, malathion, metolachlor, propazine, simazine, and toxaphene. Most samples had detectable concentrations of alachlor, atrazine, metolachlor, and simazine, and the loads of these constituents that were transported during each of the 4 years were computed. Of the samples collected from each of the streams—Little Conestoga Creek, Mill Creek, Conestoga River, and Pequea Creek—10, 12, 15, and 18 percent, respectively, had atrazine concentrations greater than 3.0 micrograms per liter, the U.S. Environmental Protection Agency maximum contaminant level. Loads of atrazine, metolochlor, and simazine were greater than loads of any other herbicides. The largest loads were transported during 1994. Loads of atrazine transported by the four streams during periods of storm- flow from May to September 1994 totaled 3.46, 28.3, 263, and 46.8 pounds, respectively. The total loads of atrazine transported by the four streams?Little Conestoga Creek, Mill Creek, Conestoga River, and Pequea Creek—during calendar year 1994 were 6.48, 54.1, 498, and 102 pounds, respectively. A little less than half the atrazine load transported by each stream—45, 39, 42, and 42 percent, respectively—was transported during storms that occurred from May through September. Average annual yields of atrazine for the period 1992-95 were 0.59, 0.64, 0.68, and 0.51 pounds per square mile from the Little Conestoga Creek, Mill Creek, Conestoga River, and Pequea Creek, respectively. Average annual yields of simazine were 0.36, 1.2, 0.54, and 0.48 pounds per square mile, respectively, and average annual yields of metolachlor were 0.46, 0.49, 0.54, and 0.31 pounds per square mile, respectively. Less than 1 percent of both the atrazine and metolachlor that was applied to all basins was transported by streamflow.

Water-Resources Investigations Report↗

USGS2010

Pollen-based continental climate reconstructions at 6 and 21 ka: A global synthesis

Subfossil pollen and plant macrofossil data derived from 14 C-dated sediment profiles can provide quantitative information on glacial and interglacial climates. The data allow climate variables related to growing-season warmth, winter cold, and plant-available moisture to be reconstructed. Continental-scale reconstructions have been made for the mid-Holocene (MH, around 6 ka) and Last Glacial Maximum (LGM, around 21 ka), allowing comparison with palaeoclimate simulations currently being carried out as part of the fifth Assessment Report (AR5) of the Intergovernmental Panel on Climate Change. The synthesis of the available MH and LGM climate reconstructions and their uncertainties, obtained using modern-analogue, regression and model-inversion techniques, is presented for four temperature variables and two moisture variables. Reconstructions of the same variables based on surface-pollen assemblages are shown to be accurate and unbiased. Reconstructed LGM and MH climate anomaly patterns are coherent, consistent between variables, and robust with respect to the choice of technique. They support a conceptual model of the controls of Late Quaternary climate change whereby the first-order effects of orbital variations and greenhouse forcing on the seasonal cycle of temperature are predictably modified by responses of the atmospheric circulation and surface energy balance.

Climate Dynamics↗

USGS2018

The epidemiology of avian pox and interaction with avian malaria in Hawaiian forest birds

Despite the purported role of avian pox ( Avipoxvirus spp.) in the decline of endemic Hawaiian birds, few studies have been conducted on the dynamics of this disease, its impact on free‐living avian populations, or its interactions with avian malaria ( Plasmodium relictum ). We conducted four longitudinal studies of 3–7 yr in length and used generalized linear models to evaluate cross‐sectional prevalence of active pox infection and individuals with healed deformities that had recovered from pox. Our goal was to understand how species, season, elevation, malaria infection, and other biological characteristics influenced pox infection in ʻApapane, Hawaiʻi ʻAmakihi, ʻIʻiwi, and Japanese White‐eye across low‐, mid‐, and high‐elevation forests on the island of Hawaiʻi. We also used multi‐state capture‐recapture (longitudinal) models to estimate pox infection rates, recovery rates, and potential pox‐related mortality. Pox infection rates were typically highest in low‐elevation forests, followed by mid‐elevation forests, and lowest in high‐elevation forests. We also found seasonal changes in pox prevalence throughout the annual cycle; typically increasing from spring through summer, peaking in fall, and declining in winter. These seasonal changes occurred in low‐ and mid‐elevation forests, but not in high elevations where pox infection was low. Seasonal and elevation patterns of pox infection are like those for avian malaria, strongly implicating mosquito vectors, rather than other biting arthropods or contact transmission, as the primary source of transmitting both diseases. Most native Hawaiian birds recovered from pox infection within 6 months; frequently without permanent lesions. Contrary to our expectations, we found no direct evidence that pox is a substantial mortality factor in any of the three native bird species we studied. Birds with chronic malaria infection were more likely to have both active pox infection and healed pox lesions suggesting a synergistic interaction that may influence the evolution of pox virulence. Because pox infection can be assessed visually, and birds have a high recovery rate, this disease may be a sensitive indicator of the seasonal and annual risk of transmission of malaria in Hawaiʻi.

Ecological Monographs↗

USGS2016

Relations between rainfall–runoff-induced erosion and aeolian deposition at archaeological sites in a semi-arid dam-controlled river corridor

Process dynamics in fluvial-based dryland environments are highly complex with fluvial, aeolian, and alluvial processes all contributing to landscape change. When anthropogenic activities such as dam-building affect fluvial processes, the complexity in local response can be further increased by flood- and sediment-limiting flows. Understanding these complexities is key to predicting landscape behavior in drylands and has important scientific and management implications, including for studies related to paleoclimatology, landscape ecology evolution, and archaeological site context and preservation. Here we use multi-temporal LiDAR surveys, local weather data, and geomorphological observations to identify trends in site change throughout the 446-km-long semi-arid Colorado River corridor in Grand Canyon, Arizona, USA, where archaeological site degradation related to the effects of upstream dam operation is a concern. Using several site case studies, we show the range of landscape responses that might be expected from concomitant occurrence of dam-controlled fluvial sand bar deposition, aeolian sand transport, and rainfall-induced erosion. Empirical rainfall-erosion threshold analyses coupled with a numerical rainfall–runoff–soil erosion model indicate that infiltration-excess overland flow and gullying govern large-scale (centimeter- to decimeter-scale) landscape changes, but that aeolian deposition can in some cases mitigate gully erosion. Whereas threshold analyses identify the normalized rainfall intensity (defined as the ratio of rainfall intensity to hydraulic conductivity) as the primary factor governing hydrologic-driven erosion, assessment of false positives and false negatives in the dataset highlight topographic slope as the next most important parameter governing site response. Analysis of 4+ years of high resolution (four-minute) weather data and 75+ years of low resolution (daily) climate records indicates that dryland erosion is dependent on short-term, storm-driven rainfall intensity rather than cumulative rainfall, and that erosion can occur outside of wet seasons and even wet years. These results can apply to other similar semi-arid landscapes where process complexity may not be fully understood.

Arizona↗

USGS2026

Modeling the temperature-mediated link between demography and biomass in ectotherms

Population models can forecast the effects of environmental change, disturbance, and management decisions on populations of interest. Most population models focus on abundance of individuals, but biomass may be a more relevant quantity at the community or ecosystem scale, especially when investigating interaction of multiple stressors and cross-ecosystem energy flows. We developed a stage-structured population model that integrates a temperature-mediated tradeoff between development rate and final body size of invertebrates, allowing projection of both population size and standing stock biomass in ecosystems that experience disturbances. We parameterized the model for four aquatic invertebrate life-history types spanning a range of lifespan and susceptibility to disturbance. We observed several emergent properties typical of invertebrate populations but not explicitly included in the model, including self-organization of cohort structure under seasonal environments, a tradeoff between lifespan duration and rate of post-disturbance population recovery, and chaotic population dynamics under high growth rates. Sensitivity analysis revealed that although elevated mean temperature increased population size, total population biomass remained unchanged or even decreased due to declining individual biomass, which has implications for ecosystem processes under a changing climate. The seasonal timing of disturbance showed a strong interaction with temperature regime, with summer versus winter pulse disturbances affecting biomass and abundance in characteristically different ways. Linking invertebrate abundance and biomass dynamics to abiotic drivers through this time-varying matrix population model reveals how life-history shapes aquatic invertebrate response to shifting seasons, temperatures, and disturbance, which is key to understanding the impacts of climate change on aquatic ecosystems.

Ecological Modelling↗

USGS2004

Community structure of fishes inhabiting aquatic refuges in a threatened Karst wetland and its implications for ecosystem management

We illustrate the importance of subsurface refuges for conservation of aquatic fauna with our studies of karstic wetlands in Everglades National Park, Florida, USA. Managers have proposed that water levels there should not fall more than 46 cm below ground level for more than 90 days annually. In four areas, 84% of solution holes were less than 46 cm deep and holes deeper than lm were rare (<3 km-2). Null-model analysis indicated no "structure" in the solution-hole fish communities early in the dry season, but that structure emerged as drying progressed. Native cyprinodontiforms were abundant in shallow solution holes that dry annually under current management, while predatory species (often non-native) tended to dominate deeper holes. Water quality was correlated with hole volume and with composition of late dry-season fish communities. Tremendous losses of fish biomass occurred when water levels fell below 46 cm from ground surface. Most native taxa were unlikely to survive in the deep refuges that held predatory non-native taxa. ?? 2003 Elsevier Ltd. All rights reserved.

Biological Conservation↗

USGS2013

The precarious persistence of the endangered Sierra Madre yellow-legged frog Rana muscosa in southern California, USA

We conducted surveys for the Endangered Sierra Madre yellow-legged frog Rana muscosa throughout southern California to evaluate the current distribution and status of the species. Surveys were conducted during 2000–2009 at 150 unique streams and lakes within the San Gabriel, San Bernardino, San Jacinto, and Palomar mountains of southern California. Only nine small, geographically isolated populations were detected across the four mountain ranges, and all tested positive for the amphibian chytrid fungus Batrachochytrium dendrobatidis . Our data show that when R. muscosa is known to be present it is easily detectable (89%) in a single visit during the frog's active season. We estimate that only 166 adult frogs remained in the wild in 2009. Our research indicates that R. muscosa populations in southern California are threatened by natural and stochastic events and may become extirpated in the near future unless there is some intervention to save them.

California↗

USGS2011

Elk Monitoring Protocol for Lewis and Clark National Historical Park, Version 1.0

Maintaining elk (Cervus elaphus roosevelti) herds that frequent Lewis and Clark National Historical Park (NHP) is central to the park’s purpose of preserving the historic, cultural, scenic, and natural resources. Elk were critical to sustaining the members of the Lewis and Clark expedition by providing food and clothing over the winter of 1805-1806. Today, elk viewing opportunities in the park and surrounding region generate broad appeal with the visiting public, which number over 250,000 per year at the Fort Clatsop visitor center. This protocol describes procedures for monitoring trends in the use of the Fort Clatsop area by Roosevelt elk. Specific objectives of elk monitoring in Lewis and Clark NHP are to measure the relative use and proportion of area used by elk during winter in the Fort Clatsop Unit of the park, and the rate at which elk are sighted from roads in and around the park. Relative use and the proportion of area used by elk are determined from elk fecal pellet surveys conducted every other year in the Fort Clatsop park unit. Pairs of observers visit a systematic array of permanent plots in the fall to clear them of elk fecal pellets, and return to the plots in late winter to count elk fecal pellets that have accumulated during winter. Half of the subplots are counted by two independent observers, which allows for the estimation of relative use and proportion of area occupied by elk with analyses of detection biases that account for unseen elk pellet groups. Standardized road surveys are conducted in and near the Fort Clatsop park unit three or four times monthly during alternate months. Data from road surveys are used to quantify the rate that park visitors would be expected to see elk, when driving the selected set of routes. The monitoring protocol is based on three field seasons of development and testing. The protocol narrative describes the background, rationale, sampling design, field methods, analytical methods, data management, reporting, personnel requirements, and operational requirements for elk monitoring in Lewis and Clark NHP. The sampling design reflects tradeoffs between statistical and ecological considerations, safety, and current budget considerations. The protocol provides adequate power to detect a doubling or halving of elk use in the Fort Clatsop unit and surrounding areas within 15 years. Step-by-step guidance for planning and completing the monitoring tasks are in the attached standard operating procedures (SOPs). Information on the status and trends of elk use in Lewis and Clark NHP will allow park managers to assess the effects on elk of restoration programs within the park, build community partnerships, and identify potential linkages between regional land use changes and elk use of the Park. Lewis and Clark NHP has an active ecological restoration program that aims to recreate, where possible, ecological conditions that Lewis and Clark encountered. The restoration program includes an extensive exotic plant removal program, wetland restoration, and silvicultural treatments that will hasten development of late-seral conditions in recently acquired forest lands of the Fort Clatsop park unit. In the future, monitoring results can be used to test for spatial associations between ecological restoration treatments and relative use by elk. The park also plans to feature results from elk monitoring prominently in its educational outreach activities to help interpret the historical and current ecological context of the Lewis and Clark story, and engender public support for the park mission and management activities. Although NPS does not manage non-park lands, information about trends in the distribution of elk use will be valuable in public outreach and discussions with other partnering agencies and regional private landowners.

Natural Resource Report↗

USGS2008

Water movement within the unsaturated zone in four agricultural areas of the United States

Millions of tons of agricultural fertilizer and pesticides are applied annually in the USA. Due to the potential for these chemicals to migrate to groundwater, a study was conducted in 2004 using field data to calculate water budgets, rates of groundwater recharge and times of water travel through the unsaturated zone and to identify factors that influence these phenomena. Precipitation was the only water input at sites in Indiana and Maryland; irrigation accounted for about 80% of total water input at sites in California and Washington. Recharge at the Indiana site (47.5 cm) and at the Maryland site (31.5 cm) were equivalent to 51 and 32%, respectively, of annual precipitation and occurred between growing seasons. Recharge at the California site (42.3 cm) and Washington site (11.9 cm) occurred in response to irrigation events and was about 29 and 13% of total water input, respectively. Average residence time of water in the unsaturated zone, calculated using a piston-flow approach, ranged from less than 1 yr at the Indiana site to more than 8 yr at the Washington site. Results of bromide tracer tests indicate that at three of the four sites, a fraction of the water applied at land surface may have traveled to the water table in less than 1 yr. The timing and intensity of precipitation and irrigation were the dominant factors controlling recharge, suggesting that the time of the year at which chemicals are applied may be important for chemical transport through the unsaturated zone. Copyright ?? 2008 by the American Society of Agronomy, Crop Science Society of America, and Soil Science Society of America. All rights reserved.

Journal of Environmental Quality↗

USGS2016

Changes in phosphorus concentrations and loads in the Assabet River, Massachusetts, October 2008 through April 2014

Treated effluent discharged from municipal wastewater-treatment plants to the Assabet River in central Massachusetts includes phosphorus, which leads to increased growth of nuisance aquatic plants that decrease the river’s water quality and aesthetics in impounded reaches during the growing season. To improve the river’s water quality and aesthetics, the U.S. Environmental Protection Agency approved a total maximum daily load for phosphorus in 2004 that directed the wastewater-treatment plants to reduce the amount of total phosphorus discharged to the river by 2012. The permitted total phosphorus monthly average of 0.75 milligrams per liter during the aquatic plant growing season (April 1 through October 31) was reduced by the total maximum daily load to a target of 0.1 milligrams per liter by 2012, and the nongrowing-season limit was unchanged at 1.0 milligrams per liter. From October 2008 through April 2014, the U.S. Geological Survey, in cooperation with the Massachusetts Department of Environmental Protection, measured streamflow and collected weekly flow-proportional, composite samples of water from the Assabet River for analysis of concentrations of total phosphorus and orthophosphate. Streamflow and concentration data were used to estimate total phosphorus and orthophosphate loads in the river. The purpose of this monitoring effort was to evaluate phosphorus concentrations and loads in the river before, during, and after the wastewater-treatment-plant upgrades and to assess the effects of seasonal differences in permitted discharges. The locations of water-quality-monitoring stations, with respect to the Hudson and Ben Smith impoundments, enabled examination of effects of phosphorus entering and leaving the impoundments. Annual median concentrations of total phosphorus in wastewater-treatment plants were reduced by more than 80 percent with the plant upgrades. Measured instream annual median concentrations of total phosphorus in the Assabet River decreased by about 38 to 50 percent at three of the four monitoring stations following the wastewater-treatment-plant upgrades. At the station farthest upstream, the median total phosphorus concentration remained unchanged throughout the study; this may be attributed to the site location and potential resuspension of particulate organic matter during periods of increased streamflow. Annual median loads from the wastewater-treatment plants were reduced by up to 91 percent following the upgrades, instream annual median total phosphorus loads at the three downstream stations decreased by 71 to 76 percent, and instream orthophosphate loads at the three downstream stations decreased by 79 to 87 percent. Seasonal fluctuations (growing versus nongrowing) of total phosphorus and orthophosphate were observed instream before the upgrades. However, after the upgrades, fluctuations in phosphorus released from the treatment plants were slight and seasonal changes were typically not observed instream. Annual loads entering and leaving the two impoundments were inconclusive in determining whether the impoundments were sources or sinks of total phosphorus during the study. Total phosphorus loads entering the Hudson impoundment were consistently greater than those leaving; however, there was uncertainty about the loads at the monitoring station upstream from this impoundment. At the Ben Smith impoundment, total phosphorus and orthophosphate loads downstream were slightly greater than those upstream from the impoundment, but the differences may reflect additions from tributaries and overland runoff. Estimated instream total phosphorus concentrations and loads indicated that the decreases in total phosphorus in wastewater-treatment-plant discharges were accompanied by reductions measured in the Assabet River. A statistical analysis which incorporates the effect of varying flow conditions demonstrated significant reductions in total phosphorus concentrations after the wastewater-treatment-plant upgrades at three of the four instream monitoring stations. No significant change was observed at the most upstream location, the Assabet River at Port Street at Hudson, Massachusetts (station number 01096835), which may have been affected by flow-related resuspension of particulate phosphorus.

Massachusetts↗

USGS1986

Population trends, reproductive success, and organochlorine chemical contaminants in waterbirds nesting in Galveston Bay, Texas

The effects of environmental contaminants on the reproductive success of olivaceous cormorants ( Phalacrocorax olivaceus ), laughing gulls ( Larus atricilla ), and black skimmers ( Rhynchops niger ) nesting in Galveston Bay, Texas were investigated from 1980 through 1982. Populations of cormorants and gulls have remained stable in recent years, but skimmer numbers may have declined. Cormorants produced 1.9 to 2.8 young per pair in nests that remained active throughout the season. Gull and skimmer reproduction was seriously limited by storms and predation. DDE and polychlorinated biphenyl (PCB) residues in carcasses and eggs generally were below levels associated with chronic poisoning and reproductive problems in most species of birds. Possible exceptions were four black skimmer carcasses with DDE concentrations that ranged from 20 to 92 Μ g/g and one olivaceous cormorant carcass with 20 Μ g/g DDE. The generally low levels of dieldrin, chlordane, HCB, toxaphene, and heptachlor epoxide were below those know to affect avian reproduction and survival. Mean DDE residues in cormorant and gull eggs were less than 1.8 Μ g/g. The mean DDE residue in skimmer eggs was less than 3.3 Μ g/g; 12% of the skimmer eggs contained at least 12 Μ g/g DDE, a level known to cause reproductive problems in some avian species. DDE in the eggs of all species declined from 1.5- to 7-fold over the past decade. Polychlorinated biphenyl was detected in all gull and skimmer eggs and in 90% of the cormorant eggs. Residues of PCB in cormorant and skimmer eggs in 1980–82 were lower than in 1970, but the frequency of occurrence in gull eggs increased. Polychlorinated styrenes were recovered in 45% of the cormorant carcasses at levels below 1 Μ g/g. Eggshell thicknesses in all three species were similar to those of eggshells collected before the widespread use of DDT.

Texas↗

USGS2013

Surface water quality in streams and rivers: Scaling, and climate change

This chapter explores spatial and temporal scaling and the impact of climate change on four basic water quality parameters: temperature, pH, dissolved oxygen, and suspended sediment. An introduction describing the conditions and changes in these water quality parameters is presented. Temporal scaling of water quality parameters is discussed on diel (24 h), precipitation event, and seasonal time scales. Discussion of longitudinal scaling of these parameters is included as well. Effects of climate change are presented here with a focus on observed trends, modeling results, and confounding factors in predicting climate change-induced shifts in water quality. This review highlights how factors such as geographic location, land cover, and human perturbations can alter water quality trends in rivers and streams.

Book chapter↗

USGS2017

Using multi-date satellite imagery to monitor invasive grass species distribution in post-wildfire landscapes: An iterative, adaptable approach that employs open-source data and software

Among the most pressing concerns of land managers in post-wildfire landscapes are the establishment and spread of invasive species. Land managers need accurate maps of invasive species cover for targeted management post-disturbance that are easily transferable across space and time. In this study, we sought to develop an iterative, replicable methodology based on limited invasive species occurrence data, freely available remotely sensed data, and open source software to predict the distribution of Bromus tectorum (cheatgrass) in a post-wildfire landscape. We developed four species distribution models using eight spectral indices derived from five months of Landsat 8 Operational Land Imager (OLI) data in 2014. These months corresponded to both cheatgrass growing period and time of field data collection in the study area. The four models were improved using an iterative approach in which a threshold for cover was established, and all models had high sensitivity values when tested on an independent dataset. We also quantified the area at highest risk for invasion in future seasons given 2014 distribution, topographic covariates, and seed dispersal limitations. These models demonstrate the effectiveness of using derived multi-date spectral indices as proxies for species occurrence on the landscape, the importance of selecting thresholds for invasive species cover to evaluate ecological risk in species distribution models, and the applicability of Landsat 8 OLI and the Software for Assisted Habitat Modeling for targeted invasive species management.

International Journal of Applied Earth Observation↗

USGS2003

Mechanisms underlying export of N from high-elevation catchments during seasonal transitions

Mechanisms underlying catchment export of nitrogen (N) during seasonal transitions (i.e., winter to spring and summer to autumn) were investigated in high-elevation catchments of the Sierra Nevada using stable isotopes of nitrate and water, intensive monitoring of stream chemistry and detailed catchment N-budgets. We had four objectives: (1) determine the relative contribution of snowpack and soil nitrate to the spring nitrate pulse, (2) look for evidence of biotic control of N losses at the catchment scale, (3) examine dissolved organic nitrogen (DON) export patterns to gain a better understanding of the biological and hydrological controls on DON loss, and (4) examine the relationship between soil physico-chemical conditions and N export. At the Emerald Lake watershed, nitrogen budgets and isotopic analyses of the spring nitrate pulse indicate that 50 to 70% of the total nitrate exported during snowmelt (ca. April to July) is derived from catchment soils and talus; the remainder is snowpack nitrate. The spring nitrate pulse occurred several weeks after the start of snowmelt and was different from export patterns of less biologically labile compounds such as silica and DON suggesting that: (1) nitrate is produced and released from soils only after intense flushing has occurred and (2) a microbial N-sink is operating in catchment soils during the early stages of snowmelt. DON concentrations varied less than 20-30% during snowmelt, indicating that soil processes tightly controlled DON losses.

Biogeochemistry↗

USGS2015

Effects of lake surface elevation on shoreline-spawning Lost River Suckers

We analyzed remote detection data from PIT-tagged Lost River Suckers Deltistes luxatus at four shoreline spawning areas in Upper Klamath Lake, Oregon, to determine whether spawning of this endangered species was affected by low water levels. Our investigation was motivated by the observation that the surface elevation of the lake during the 2010 spawning season was the lowest in 38 years. Irrigation withdrawals in 2009 that were not replenished by subsequent winter-spring inflows caused a reduction in available shoreline spawning habitat in 2010. We compared metrics of skipped spawning, movement among spawning areas, and spawning duration across 8 years (2006-2013) that had contrasting spring water levels. Some aspects of sucker spawning were similar in all years, including few individuals straying from the shoreline areas to spawning locations in lake tributaries and consistent effects of increasing water temperatures on the accumulation of fish at the spawning areas. During the extreme low water year of 2010, 14% fewer female and 8% fewer male suckers joined the shoreline spawning aggregation than in the other years. Both males and females visited fewer spawning areas within Upper Klamath Lake in 2010 than in other years, and the median duration at spawning areas in 2010 was at least 36% shorter for females and 20% shorter for males relative to other years. Given the imperiled status of the species and the declining abundance of the population in Upper Klamath Lake, any reduction in spawning success and egg production could negatively impact recovery efforts. Our results indicate that lake surface elevations above 1,262.3-1,262.5 m would be unlikely to limit the number of spawning fish and overall egg production.

Oregon↗