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Regional chloride distribution in the Northern Atlantic Coastal Plain aquifer system from Long Island, New York, to North Carolina

The aquifers of the Northern Atlantic Coastal Plain are the principal source of water supply for the region’s nearly 20 million residents. Water quality and water levels in the aquifers, and maintenance of streamflow, are of concern because of the use of this natural resource for water supply and because of the possible effects of climate change and changes in land use on groundwater. The long-term sustainability of this natural resource is a concern at the local community scale, as well as at a regional scale, across state boundaries. In 2010, the U.S. Geological Survey (USGS) began a regional assessment of the Northern Atlantic Coastal Plain aquifers. An important part of this assessment is a regional interpretation of the extent of saltwater and the proximity of saltwater to fresh-groundwater resources and includes samples and published interpretations of chloride concentrations newly available since the last regional chloride assessment in 1989. This updated assessment also includes consideration of chloride samples and refined interpretations that stem from the 1994 discovery of the buried 35 million year old Chesapeake Bay impact structure that has substantially altered the understanding of the hydrogeologic framework and saltwater distribution in eastern Virginia. In this study, the regional area of concern for the chloride samples and interpretations extends from the Fall Line in the west to the outer edge of the Continental Shelf in the east and from the eastern tip of Long Island in the north to about halfway down the North Carolina coast in the south. Discussions of chloride distribution are presented for each of the 10 regional aquifer layers of the Northern Atlantic Coastal Plain, including the offshore extents. Maps of interpreted lines of equal concentration or isochlors were manually prepared for nine of the regional aquifers; a map was not prepared for the surficial regional aquifer. The isochlor interpretations include the offshore extent of the nine regional aquifers and are presented on a 1:2,000,000 scale base map. Vertically, the chloride samples and interpretations range from deepest (oldest) to shallowest (youngest)—Potomac-Patuxent, Potomac-Patapsco, Magothy, Matawan, Monmouth-Mount Laurel, Aquia, Piney Point, Lower Chesapeake, and Upper Chesapeake regional aquifers. The approach of this study maximizes the overall density of chloride information and data by assessing relevant published interpretations, all USGS chloride samples, and all relevant offshore samples in one comprehensive interpretation. Published isochlors, where they were interpreted by regional aquifer, were used as much as possible for this regional isochlor assessment. Publication dates for the isochlors used range from 1982 to 2015, and the scales for the isochlors range from local (county or municipality) to state (sub-regional) to regional. The USGS National Water Information System database provided well sample data for the parts of aquifers that are mainly beneath the land areas and yielded 37,517 water-quality records for 1903 through 2011. Published data reports from four phases of research-related offshore coring (1976, 1993, 1997, 2009) were the main source of water-quality data for the parts of aquifers from the shoreline to the outer edge of the Continental Shelf and yielded samples from multiple depths of each of 13 cores. This study also used interpretations and offshore core data from the last regional chloride assessment (1989) which, in addition to 7 offshore cores, included water-quality data from about 500 wells, and borehole geophysics interpretations from a subset of 11 wells. All published information and data that were used in this study were considered time independent and did not assess the published interpretations or data for temporal trends. The approach used here examined only published interpretations and available chloride data, and did not directly use supplemental techniques that can provide insight into the distribution of saltwater, such as geochemical characterization, borehole geophysical information, and geochronology. Isochlor maps for this study are limited to manual interpretations of the 250-milligram per liter (mg/L) and 10,000-mg/L boundaries developed for 9 of the 10 regional aquifers that constitute the regional hydrogeologic framework of the Northern Atlantic Coastal Plain. For a given aquifer, the approach was to initially consider published isochlor interpretations, where available, then to modify the published interpretations, if necessary, to the extent indicated by the well and core samples. The final step was to interpolate isochlors to the full extent of each aquifer layer in areas with sufficient samples or cited interpretations, or to extrapolate isochlors in areas with no samples or where samples were sparse. The principal limitation of this study is that, because of its regional extent, data and information density can vary greatly, and thus confidence in interpretations can vary widely for onshore and offshore areas across the study area. In areas of sparse data, some samples of elevated chloride could be misinterpreted as being part of a regional elevated chloride trend, and in other cases, an elevated concentration could be misinterpreted as being of only local importance. The interpretive work of this study was applied to a 1:2,000,000 scale base map. Locations of isochlors, wells, cores, political boundaries, and shorelines are meant to be considered approximate. The isochlors presented in this study were manually interpreted for each aquifer unit as a conceptual representation of an equal concentration line approximately in the middle of an aquifer’s thickness. Differences in chloride concentration lines between the top and bottom of an aquifer could be substantial, especially for the thick parts of aquifers, but that information is not presented in this regional assessment. Although additional offshore chloride data are available compared to 27 years ago (1989), the offshore information remains sparse, resulting in less confidence in the offshore interpretations than in the onshore interpretations. Regionally, the 250- and 10,000-mg/L isochlors tend to map progressively eastward from the deepest to the shallowest aquifers across the Northern Atlantic Coastal Plain aquifer system but with some exceptions. The additional data, conceptual understanding, and interpretations in the vicinity of the buried Chesapeake Bay impact structure in eastern Virginia resulted in substantial refinement of isochlors in that area. Overall, the interpretations in this study are updates of the previous regional study from 1989 but do not comprise major differences in interpretation and do not indicate regional movement of the freshwater-saltwater interface since then.

Delaware, Maryland, New Jersey, New York, North Ca↗

Seismic source characterization in central and eastern United States

This report documents earthquake geology studies conducted in the central and eastern United States (CEUS) between 2018 and 2023. The overarching goal of the earthquake geology studies was to identify and characterize fault sources in the New Madrid seismic zone, the eastern Tennessee seismic zone, and the Charleston seismic zone. These studies primarily relied on the interpretation of high-resolution topography, morphotectonic analysis of 10-meter (m) digital elevation models, field reconnaissance, and integration with new and existing subsurface datasets. Results from each study are placed into a seismic hazard framework. The first two chapters focus on the New Madrid seismic zone, which is the most seismically active region in the CEUS, to better characterize the southern extent of the Reelfoot fault in the Obion River valley, and identify and characterize proposed faults along the margins of Crowleys Ridge in the center of the Mississippi River embayment. Crowleys Ridge is a ~320-kilometer (km) long landform that has been proposed to be formed by intermittent faulting or erosion from the Mississippi River. Legacy seismic reflection data documented Eocene, Mesozoic, and older strata offset by faults on the margins of the ridge (Van Arsdale et al., 1999). A morphotectonic analysis of the topography along Crowleys Ridge indicated southward increases in catchment hypsometric integral and slope. Neotectonic mapping on high-resolution lidar data revealed a series of subparallel linear fault and fold scarps along the margins of Crowleys Ridge. These scarps offset previously mapped fluvial and alluvial surfaces that were <56 thousand years ago (ka) (Rittenour et al., 2007). Integration of new seismic reflection and airborne electromagnetic data, legacy seismic data, with the landscape morphotectonic analysis and neotectonic mapping supports the interpretation that Crowleys Ridge is bound by faults that have been active in the late Quaternary but do not experience modern seismicity. By placing these newly characterized faults into the regional framework, the Crowleys Ridge faults can be interpreted as thrust faults associated with stepovers in the overall dextral fault system, similar to the Reelfoot fault. The results of these studies indicate that seismicity has migrated eastward during the late Quaternary, with the Reelfoot fault accommodating much of the modern-day strain. The Reelfoot fault ruptured in the 1811-1812 New Madrid earthquake sequence (Fuller, 1912) and has a record of past large earthquakes (Tuttle et al., 2002; 2019). Whereas the northern extent of the fault intersects the Mississippi River and has well-expressed surface deformation, questions remained regarding the southern limit of seismicity, deformation, and overall fault length. Analysis of <25 ka river terraces along the Obion River valley in western Tennessee revealed subtle fold scarps, with increased magnitudes of deformation on progressively older terraces, indicative of a longer record of fault movement than has been documented by paleoseismic and paleoliquefaction studies alone (e.g., Kelson et al., 1996; Gold et al., 2019; Tuttle et al., 2019). The third chapter integrates surface and subsurface data to assess the landscape record of surface deformation in the eastern Tennessee seismic zone (ETSZ), which is the second most seismically active region in the CEUS. Seismicity in the ETSZ is deep (5-26 km) and focused in the Proterozoic rock below the Paleozoic detachment. Although the region has experienced moderate (≤ Mw 4.8) seismicity in the instrumental record, the lack of a large historical earthquake and limited paleoseismic and paleoliquefaction evidence of prehistoric large ground shaking events have made seismic hazard characterization of the region challenging. Two models have emerged to predict the style and orientation of active surface deformation in the ETSZ. One suggests that surface rupturing earthquakes would exploit pre-existing faults along the regional structural grain (Cox et al., 2022). The second model advocates for primarily strike-slip motion on east-west or north-south faults, following analyses of recent seismicity (Chapman et al., 1997; Dunn and Chapman, 2006; Daniels and Peng, 2022) and the modern stress field (Levandowski et al., 2018). In our analysis, neotectonic mapping of high-resolution lidar data reveals a concentration of lineaments with east-west orientations, with some corresponding to previously mapped east-west faults that crosscut the northeast-southwest regional structural grain from the Paleozoic orogeny. A morphotectonic analysis of catchments and river segments within the same lithology indicates subtle differences that may be indicative of a longer-term tectonic uplift signal. These changes in morphotectonic metrics spatially correspond to newly mapped lineaments and previously mapped east-west trending faults. Within a regional framework, we suggest that diffuse surface deformation associated with deep seismicity is accommodated on a network on east-west faults. However, further work is needed to better understand the potential late Pleistocene fault activity of these lineaments, and we propose that the ETSZ is still best characterized as an area source in seismic hazard models. The final chapter presents preliminary work to create a geographic information system (GIS) database of recent studies analyzing surface and subsurface datasets and interpretations in the Charleston seismic zone, South Carolina. This GIS database will serve as a foundation for future work to analyze new quality level 1 (QL1; <0.5 m resolution) lidar data over the 1886 magnitude (M) 7 Charleston epicentral region to identify possible fault source sources responsible for the 1886 or other surface-rupturing events. This chapter briefly summarizes three new subsurface datasets, including seismic reflection (Pratt et al., 2022; Liberty, 2022) and seismicity data (Chapman et al., 2016), and one new surface dataset (Marple and Hurd, 2020), and their interpretations of potentially active lineaments and faults in the region.

central and eastern United States↗

System characterization report on Resourcesat-2A Advanced Wide Field Sensor

Executive Summary This report documents the system characterization of the Indian Space Research Organisation Resourcesat-2A Advanced Wide Field Sensor (AWiFS) and is part of a series of system characterization reports produced by the U.S. Geological Survey Earth Resources Observation and Science Cal/Val Center of Excellence. These reports describe the methodology and procedures used for characterization, present technical and operational information about the specific sensing system being evaluated, and provide a summary of test measurements, data retention practices, data analysis results, and conclusions. Resourcesat-2A was launched in 2016 on the Polar Satellite Launch Vehicle-C36; it is identical to Resourcesat-2, and together, they decrease imaging revisit time from 5 days to 2–3 days, providing data continuity and improved temporal resolution. Resourcesat-2 and -2A carry the AWiFS, Linear Imaging Self Scanning-3, and Linear Imaging Self Scanning-4 medium-resolution imaging sensors, continuing the legacy of the Indian Space Research Organisation’s Indian Remote Sensing-1C/1D/P3 satellite programs. More information about Indian Space Research Organisation satellites and sensors is available through the Joint Agency Commercial Imagery Evaluation Earth Observing Satellites Online Compendium and from the Indian Space Research Organisation at https://www.isro.gov.in/ . The Earth Resources Observation and Science Cal/Val Center of Excellence system characterization team assessed the geometric, radiometric, and spatial performance of the Resourcesat-2A AWiFS sensor. Geometric performance is divided into the interior geometric performance of band-to-band registration and the exterior geometric performance of geolocation accuracy. The interior geometric performance had offsets in the range of −1.10 meters (m; −0.020 pixel) to 3.67 m (0.066 pixel) in easting and −5.68 m (−0.101 pixel) to 10.38 m (0.185 pixel) in northing with root mean square error values from 5.60 m (0.100 pixel) to 11.31 m (0.202 pixel) in easting and from 3.00 m (0.054 pixel) to 13.52 m (0.241 pixel) in northing. The exterior geometric performance had mean offsets of −25.29 m in easting and 16.22 m northing with root mean square error values of 26.07 m in easting and 17.60 m in northing compared to the Landsat 8 Operational Land Imager sensor. The radiometric performance had offsets from −0.002 to 0.029 and slopes from 0.733 to 1.012. Spatial performance was in the range of 1.354 to 1.639 pixels for full width at half maximum with a modulation transfer function at a Nyquist frequency in the range of 0.108 to 0.174.

Open-File Report↗

Preface to book: Wetland carbon and environmental management

The idea for this book, including its organization and contents, has its origin in the latest environmental and climate policy requirements in the United States, as well as science advances. In 2007, the U.S. Congress passed the Energy Independence and Security Act (EISA), from which Section 712 required U.S. Federal agencies to provide a better understanding of carbon and greenhouse gas fluxes across the United States. As a result, largescale and coordinated efforts were launched to assess carbon storage, carbon fluxes, and greenhouse gas fluxes including CO2, CH4, and N2O from all major terrestrial and freshwater aquatic ecosystems, including forest, grassland/shrub, agricultural lands, wetlands, and rivers, streams, lakes, and impoundments. The EISA assessment produced major results (Selmants et al., 2017; Zhu, 2011; Zhu & McGuire, 2016; Zhu & Reed, 2012, 2014), but recognized that wetlands remained a significant source of uncertainty, especially for those wetlands that were being actively managed. The more recent Second State of the Carbon Cycle Report by the U.S. Global Change Research Program (USGCRP), which devoted two separate chapters to inland and coastal wetlands, respectively, noted that large knowledge gaps still remain, ranging from inadequate analysis of restored and managed wetlands, and consequences of management decisions, to future wetland responses to climate change (USGCRP, 2018). In recent literature, wetland management is suggested as a potential natural solution to mitigate climate change (Fargione et al., 2018, Kroeger et al., 2017) and help offset direct losses of wetlands from sea level rise, subsidence, and coastal erosion (Wang et al., 2017). The recognition that a synthesis of wetland carbon management was urgently needed was the genesis of Wetland Carbon and Environmental Management; discerning the relationships between wetland management and carbon flux (loss or gain) is an international goal.

Geophysical Monograph Series↗

Water balance dynamics in the Nile Basin

Understanding the temporal and spatial dynamics of key water balance components of the Nile River will provide important information for the management of its water resources. This study used satellite-derived rainfall and other key weather variables derived from the Global Data Assimilation System to estimate and map the distribution of rainfall, actual evapotranspiration (ETa), and runoff. Daily water balance components were modelled in a grid-cell environment at 0·1 degree (∼10 km) spatial resolution for 7 years from 2001 through 2007. Annual maps of the key water balance components and derived variables such as runoff and ETa as a percent of rainfall were produced. Generally, the spatial patterns of rainfall and ETa indicate high values in the upstream watersheds (Uganda, southern Sudan, and southwestern Ethiopia) and low values in the downstream watersheds. However, runoff as a percent of rainfall is much higher in the Ethiopian highlands around the Blue Nile subwatershed. The analysis also showed the possible impact of land degradation in the Ethiopian highlands in reducing ETa magnitudes despite the availability of sufficient rainfall. Although the model estimates require field validation for the different subwatersheds, the runoff volume estimate for the Blue Nile subwatershed is within 7·0% of a figure reported from an earlier study. Further research is required for a thorough validation of the results and their integration with ecohydrologic models for better management of water and land resources in the various Nile Basin ecosystems.

Hydrological Processes↗

Limited rigor in studies of raptor mortality and mitigation at wind power facilities

Wind power is an expanding source of renewable energy. However, there are ecological challenges related to wind energy generation, including collisions of wildlife with turbines. Lack of rigor, and variation in study design, together limit efforts to understand the broad-scale effects of wind power infrastructure on wildlife populations. It is not clear, however, whether these types of limitations apply to groups of birds such as raptors that are particularly vulnerable to negative effects of wind energy. We reviewed 672 peer-reviewed publications, unpublished reports, and citations from 321 wind facilities in 12 countries to evaluate methods used to monitor and mitigate for wind facility impacts on raptors. Most reports that included raptor monitoring (86 %, n = 461) only conducted post-construction monitoring for raptor fatalities, while few (12 %; n = 65) estimated pre-construction raptor use. Only 27 % of facilities ( n = 62) provided estimates of fatalities or raptor use across multiple construction phases, and the percentage of facilities with data available from multiple construction periods has not changed over time. A formal experimental study design was incorporated into surveys at only 29 % of facilities. Finally, mitigation practices to reduce impacts on raptors were only reported at 23 % of facilities. Our results suggest that rigorous data collection on wind energy impacts to raptors is rare, and that mitigation of detrimental effects is seldom reported. Expanding the use of rigorous research approaches and increasing data availability would improve understanding of the regional and global effects of wind energy on raptor populations.

Biological Conservation↗

The 'Orsten': more than a Cambrian Konservat-Lagerstätte yielding exceptional preservation

In several areas of southern Sweden, limestone nodules, locally called Orsten occur within bituminous alum shales. These shales and nodules were deposited under dysoxic conditions at the bottom of what was most likely a shallow sea during the late Middle to Upper Cambrian (ca. 500 million years ago). Subsequently, the name &lsquo;Orsten&rsquo; has been referred to particular, mainly arthropod, fossils from such nodules, and, in a wider sense, to the specific type of preservation of minute fossil through secondarily phosphatization. This preservation is exceptional in yielding uncompacted and diagenetically undeformed three-dimensional fossils. &lsquo;Orsten&rsquo;-type preservation resulted from incrustation of a thin external layer and also by impregnation by calcium phosphate and, therefore, mineralization of the surface of the former animals during early diagenesis. Primarily, this type of preservation seems to have affected only cuticle-bearing metazoans such as cycloneuralian nemathelminths and arthropods. &lsquo;Orsten&rsquo; preservation in this sense seems to be limited by size, in having yielded no partial or complete animals larger than 2 mm. On the other end of the scale, even larvae 100 &mu;m long are preserved, often more complete than larger specimens, and details such as setules and pores smaller than 1 &mu;m can be observed. Fossils preserved in such a manner are almost exclusively hollow carcasses, but can be filled secondarily; less common are completely phosphatized compact specimens. The high quality of preservation makes the Swedish &lsquo;Orsten&rsquo; a typical Konservat-Lagerst&auml;tte. Yet, its special type of preservation is more widespread in time and geographical distribution than assumed initially, and the origin of the phosphate is not necessarily restricted just to one source. Subsequent to the first discoveries of limb fragments of Cambrian arthropods in 1975, animals in this special preservational type have been discovered in several continents and across a broad stratigraphic range including even Proterozoic strata. The latter have yielded early cleavage and metazoan embryonic stages, expanding knowledge on the preservational capacities of the &lsquo;Orsten&rsquo;. Here, we report the recent status of our research on the &lsquo;Orsten&rsquo; and give perspectives for future exploration on a worldwide scale, particularly in light of a recently formed international research group named Center of Orsten Research and Exploration (C.O.R.E.).

Palaeoworld↗

Measurements of bed load transport on Pacific Creek, Buffalo Fork and The Snake River in Grand Teton National Park, Wyoming

Dams disrupt the flow of both of water and sediment through a watershed. Channel morphology is a function of discharge and sediment load, and perturbations caused by dams often alter channel form, causing significant geomorphic and, potentially, ecological changes (e.g. Petts and Gurnell, 2005). At the first order, dams often produce a flow regime that is profoundly altered in the timing, magnitude, and frequency of flows (Magilligan and Nislow, 2005). Yet, the nature of channel adjustments will be specific to both the physical setting, size of the river, dam characteristics, and nature and severity of the flow regulation (Church 1995; Knighton, 1998).

Wyoming↗

Resident research associateships, postdoctoral research awards 1989: opportunities for research at the U.S. Geological Survey, U.S. Department of the Interior

The scientists of the U.S. Geological Survey are engaged in a wide range of geologic, geophysical, geochemical, hydrologic, and cartographic programs, including the application of computer science to them. These programs offer exciting possibilities for scientific achievement and professional growth to young scientists through participation as Research Associates.

Monograph↗

Proceedings of the 4th New World Luminescence Dating and Dosimetry Workshop, Denver, Colorado, May 31 June 2, 2006

Introduction: Optically stimulated luminescence (OSL) is one of a class of measurements known as stimulated phenomena. Such phenomena may be stimulated thermally or optically and the reader is referred to works by Aitken (1998) and Botter-Jensen and others (2003) for more detail. In recent years OSL has become a popular procedure for the determination of environmental radiation doses absorbed by archeological and geological materials in an attempt to date these materials. The first OSL measurements on quartz and feldspar were made using an argon ion-laser (Huntley et al., 1985). However, the development of cheaper stimulation systems based first on filtered lamps and then on light- emitting diodes (LEDs) (Spooner, et al., 1990; Botter-Jensen, and others, 1999) has led to a massive expansion in OSL dating applications. The abstracts in this volume represent presentations from a workshop held in May-June 2006, at the Denver Federal Center, Denver, Colorado, in which OSL methodologies and applications were summarized and integrated to provide a current synthesis of the OSL science being applied throughout North America. The workshop, sponsored by the U.S. Geological Survey Crustal Imaging and Characterization Team and North Dakota State University, was open to all scientists interested in OSL dating techniques and radiation dosimetry. Participants included thirty-six research scientists and students in geology, archaeology, and physics from the U.S. Geological Survey, Los Alamos National Labs, Kentucky Geological Survey, eight universities in the United States, one university in Canada, one university in India, and Riso National Labs of Denmark. The workshop included two keynote speakers: Dr. Ashok Singhvi (Physical Research Laboratory, Ahmedabad, India) spoke on 'Some Unexplored Methodological Aspects and Some New Applications of Luminescence Dating,' while Dr. Jim Feathers (University of Seattle, WA) spoke on OSL Dating of Sediments From Paleoindian Sites in Brazil. The workshop encouraged everyone to interact more to develop a broader perspective on the types of research and the problems encountered when reporting OSL ages. This meeting follows the first North American Luminescence Dating Workshop held in Tulsa, OK, by Oklahoma State University (2001), in Albuquerque, NM, by Los Alamos National Labs (2002), and in Halifax, Nova Scotia, by Dalhousie University (2004, with a name change to New World Luminescence Dating Workshop). These workshops were interspersed with the international meetings on luminescence that were held in Reno, NV, (2002), and Cologne, Germany; (2005).

Open-File Report↗

Coastal circulation and sediment dynamics in Pelekane and Kawaihae Bays, Hawaii--measurements of waves, currents, temperature, salinity, turbidity, and geochronology: November 2010--March 2011

Coral reef communities on the Island of Hawaii have been heavily affected by the construction of Kawaihae Harbor in the 1950s and by subsequent changes in land use in the adjacent watershed. Sedimentation and other forms of land-based pollution have led to declines in water quality and coral reef health over the past two decades (Tissot, 1998). Erosion mitigation efforts are underway on land, and there is a need to evaluate the impact of these actions on the adjacent coastal ecosystem. The Kohala Center and Kohala Watershed Partnership was awarded $2.69 million from the National Oceanographic and Atmospheric Administration’s (NOAA) Restoration Center as part of the American Recovery and Reinvestment Act of 2009 to stabilize soil and improve land-use practices in the Pelekane Bay watershed. The grant allowed the Kohala Watershed Partnership to implement various upland watershed management activities to reduce land-based sources of pollution into Pelekane Bay. However, a number of questions must be answered in order to: (1) evaluate the effectiveness of the terrestrial watershed remediation efforts; (2) understand the potential of the local marine ecosystem to recover; and (3) understand the potential threat that existing mud deposits in the bay pose to adjacent, relatively pristine coral reef ecosystems. The goal of this experiment was to help address these questions and establish a framework to evaluate the success of the Kohala Watershed Partnership restoration efforts. This research program will also provide resource managers with information relevant to other watershed restoration efforts currently being planned in neighboring watersheds. This project involved an interdisciplinary team of coral reef biologists from the University of Hawaii Coral Reef Assessment and Monitoring Program, who focused on the impact of sedimentation on the biota of Pelekane Bay, and a team of geologists and oceanographers from the U.S. Geological Survey (USGS), who focused on the circulation and sediment dynamics in Pelekane and Kawaihae Bays. The initial findings from the USGS research program are described in this report. These measurements support the ongoing studies being conducted as part of the USGS Coastal and Marine Geology Program’s Pacific Coral Reef Project to better understand the effect of geologic and oceanographic processes on coral reef systems.

Hawai'i↗

Effects of transmitter type, tagging method, body size, and temperature on behavior, physiology, and swimming performance of juvenile Chinook salmon (Oncorhynchus tshawytscha)

The objective of this study was to assess the impact of different tagging methods and transmitter types on juvenile salmonid behavior, mortality, physiology, and swimming performance over a range of water temperatures and fish sizes. In Chapter 1, two laboratory experiments were conducted to assess maximum burst-swimming speeds, the probability of gulping air, swimming angles, and the probability of resting on a screen in a swim tunnel. For the burst swim speed experiment, we identified a slightly reduced, but statistically significant difference in burst-swimming speeds for gastric- and surgical-tagged fish implanted with dummy radio and acoustic transmitters. For the swim tunnel experiment, surgical-tagged fish were one-half as likely to gulp air at the surface of the swim tunnel as untagged and gastric-tagged fish. We observed higher probabilities of fish gulping air at the surface for fish with tag ratios greater than 5 percent, suggesting that smaller fish required greater adjustment to their buoyancy than larger fish. We also observed that gastric-tagged fish had, on average, steeper swimming angles than untagged and surgical-tagged fish in the swim tunnel. In Chapter 2, we conducted a field-based laboratory experiment at John Day Dam to assess the sustained swimming performance (i.e., critical swimming speed or U crit ) of in-river migrating subyearling Chinook salmon that were surgically implanted with dummy radio and acoustic transmitters. Statistical tests indicated a significant reduction (about 8.3 centimeters per second [cm/s] or 1 body length per second) in sustained swimming performance for fish implanted with either radio or acoustic transmitters. We also found a significant reduction in U crit of -1.38 cm/s for every 1 degree Celsius (°C) increase in temperature. In Chapter 3, we assessed the effects of water temperature on the physiology, mortality, and swimming performance of juvenile Chinook salmon in laboratory and field experiments. Juvenile Chinook salmon generally showed elevated stress response, elevated mortality, and reduced swimming performance as water temperature increased. We concluded that the water temperature threshold for handling and tagging fish with minimal impacts seems to be near 23 °C. At 25 °C, we documented very high mortality and dramatically reduced swimming performance of tagged fish relative to controls. Telemetry studies conducted at 25 °C would not meet the critical assumption that the transmitter has minimal impacts on the study fish. In the Chapter 4, we evaluated the effects of antenna length and antenna material on the subsequent tag output power, reception, and detection of tagged fish. In a laboratory, we compared the relative signal strengths in water of 150-megahertz transmitters over a range of antenna lengths (from 6 to 30 cm) and materials (one weighing about one-half of the other). The peak relative signal strengths were at 20 and 22 cm, which are about 1 wavelength underwater at the test frequency. The peak relative signal strengths at these antenna lengths were about 50 percent greater than those of 30-cm antennas, a length commonly used in fisheries research.

Open-File Report↗

Physics to fish—Understanding the factors that create and sustain native fish habitat in the San Francisco Estuary

Executive Summary The Bureau of Reclamation (Reclamation) operates the Central Valley Project (CVP), one of the nation’s largest water projects. Reclamation has an ongoing need to improve the scientific basis for adaptive management of the CVP and, by extension, joint operations with California’s State Water Project. The U.S. Geological Survey (USGS) works cooperatively with the Bureau of Reclamation to provide scientific support for the management of Reclamation’s CVP project. Major habitat restoration efforts and a new water-diversion point are planned to benefit delta smelt ( Hypomesus transpacificus ) and other species of concern while ensuring the reliability of water supply. In addition, various flow actions and management activities have been identified as possible methods to increase populations of delta smelt and salmonid ( Oncorhynchus spp.) runs of concern. The overarching goal of this cooperative project was to provide Reclamation with the scientific information needed to evaluate the efficacy of ongoing and future adaptive management actions and to improve the scientific basis for more flexible CVP operations that would achieve water-supply reliability and fish protection. The research and monitoring described in this report comprises the period 2015–19 and focuses on management issues related to native fish species of concern, especially delta smelt. Conserving the delta smelt population while providing a reliable water supply is a primary management and policy issue in California. Our approach for this cooperative project is based on the “physics to fish” concept, the idea that high-quality habitat is generated and sustained by the interaction between physical processes and the landscape. These interactions create a template for chemical and biological processes that can change across a variety of spatial and temporal scales. Following this concept, this project (hereafter referred to as “the physics to fish project”) included monitoring and studies of water flows, sediments, water quality, and invertebrate and fish dynamics across a range of spatial and temporal scales and in regions relevant to resource managers tasked with managing water supplies and ecosystem health in the San Francisco Estuary. The intent of this approach was to document the habitat conditions, important processes, and interactions among them that create high-quality habitat for native fishes so that the likely effects of future management actions (for example, habitat restoration) can be objectively assessed at the local (site-specific), regional (within subregions of the estuary), and landscape (across the entire estuary and beyond) scales. Hydrodynamically, the upper estuary (landward of Carquinez Strait) is characterized by a fixed volume of tidally exchanged water (for example, tidal prism) that interacts with the existing channel network and bathymetry to create regions with differing hydrodynamics. Our results indicate that careful study of construction or reoperation of existing infrastructure to perform management actions can help (1) improve the accuracy of hydrodynamic models; (2) further understanding of ecological effects; and (3) enhance abilities to predict ecological outcomes. At the local scale, we developed a new concept called the Lagrangian to Eulerian (LE) ratio that can be used as a tool for understanding the importance of various hydrodynamic processes in specific channels or channel networks and for forecasting transport dynamics. Channels with LE ratios<1 in a channel network or in a dead-end slough are hydrodynamically able to develop an exchange zone between two parcels of water that may have different chemical and physical properties. In a dead-end channel, there is a landward region with long residence time (no-exchange zone) and a seaward region with short residence time (high-exchange zone) that are well mixed with seaward waters. At the transition (exchange zone) between the high and no-exchange regions, a gradient will form in water-quality constituents that differ in concentration between the landward and seaward waters. Turbidity affects fish habitat and has declined through time in the San Francisco Estuary. Average turbidity across the Sacramento–San Joaquin Delta (hereafter referred to as “the Delta”) is dependent on annual hydrology. In dry years, the region around Cache Slough (known regionally as the “Cache Slough Complex”) in the northern Delta is generally more turbid than Suisun Bay and the lower Sacramento River. When the Yolo By-Pass (known regionally as “Yolo Bypass”), a large flood bypass that runs parallel to the Sacramento River in the northern Delta, is not flooding and river flows are lower, sediment is usually transported into the Cache Slough Complex because flood tides dominate ebb tides, resulting in transport of suspended sediment from seaward areas of the upper estuary into the Cache Slough Complex. These hydrodynamic conditions also favor the formation of turbidity maximums (TMs) in the Cache Slough Complex. The TMs are areas of higher suspended-sediment concentration, providing higher-turbidity habitat favored by some fishes, including delta smelt, and they can also concentrate other constituents, including phytoplankton and organic carbon that can be important in food webs. Pelagic primary production by phytoplankton is the basis for Delta food webs supporting pelagic fishes such as delta smelt; however, phytoplankton abundance in the Delta has declined during recent decades. We examined how nutrients, hydrodynamics, and other factors affect phytoplankton blooms. Based on our results, we developed three new concepts of phytoplankton bloom formation in the Delta, each associated with a distinct set of hydrologic conditions. First, productivity cascades highlighted how local processes can contribute to phytoplankton blooms observed at the regional scale. Second, we observed phytoplankton blooms in the upper San Francisco Estuary that were associated with transport out of Yolo By-Pass (transport blooms). Third, we also documented a series of phytoplankton blooms that were in the confluence area at the landward edge of Suisun Bay. The conditions leading to creation of confluence phytoplankton blooms are not yet understood, but the confluence region connects the Cache Slough Complex with Suisun Marsh. Therefore, blooms in this area have the potential to spread to large areas of the Delta. At the landscape scale, the distribution of the invasive clams ( Potamocorbula amurensis and Corbicula fluminea , hereafter referred to as “ Corbicula ”) is driven by salinity. At smaller spatial scales, the distribution of either species is sensitive to multiple factors affecting survival and reproduction, complicating efforts to predict distribution and abundance without considering local-scale conditions across the area of interest. In the Cache Slough Complex, the area landward of the exchange zone in regions with LE ratio<1 were characterized by low abundances of Corbicula probably because recruits from seaward areas are not transported past the exchange zone and because there are no landward tributaries with adult Corbicula to provide an upstream source of recruits. Corbicula biomass was highest near or downstream from the exchange zone consistent with Corbicula grazing on phytoplankton produced in the exchange zone or transported from the no-exchange zone. The severity of Corbicula grazing could be reduced by manipulating the hydrodynamic characteristics of waterways; however, the beneficial and harmful effects on the organisms meant to benefit from increased phytoplankton production, including zooplankton and fish species of concern, should be thoroughly examined before manipulating hydrodynamic characteristics. The distribution of fishes at the landscape scale is generally driven by the position of the salinity field in the estuary. The physics to fish project compared distributions of fishes at Ryer Island, a tidal wetland in Suisun Bay and a region of variable salinity, with fish distributions at the Cache Slough Complex, a freshwater region. At Ryer Island, there was an absence of freshwater invasive species and an abundance of native species, such as Sacramento splittail ( Pogonichthys macrolepidotus ), tule perch ( Hysterocarpus traskii ), and Sacramento pikeminnow ( Ptychocheilus grandis ). The native species were almost exclusively captured in wetland and nearshore shallow-water habitat regardless of water-quality conditions. In the Cache Slough Complex, our regional scale objective was to elucidate how hydrodynamic-physical habitat interactions drive fish-community structure. Our studies showed that dendritic channel systems were better able to support native species, while intertidal habitats supported those species best able to exploit the transient character of the habitat. Habitats upstream from the exchange zone were especially important in supporting high numbers of native fishes relative to within or downstream from the exchange zone. Many of the native species were associated with tidal marsh in the no-exchange zone. More pelagic-oriented, mobile species, such as Striped Bass ( Morone saxatilis ), threadfin shad ( Dorosoma petenense ), and Sacramento pikeminnow, were more affected by water-quality conditions, such as turbidity. The physics to fish concept developed in this project provides a framework for designing individual projects and for considering the cumulative effects of multiple projects in a region, using the LE ratio as a guiding metric. The physics to fish concept may also provide a suitable framework for coordinating management actions. Tidal wetlands can function in several ways in the hydrodynamic framework. Relatively small tidal wetlands with short channel networks and with LE ratios>1 are not able to maintain a landward no-exchange zone or an exchange zone. This likely means that any contributions to pelagic food webs would be limited to resources derived from wetland vegetation, which can include dissolved and particulate organic matter (detritus) and populations of consumers that can increase in abundance based on those resources. The fate of the contributed production from these channels depends on the characteristics of the receiving waters seaward of the tidal wetland. If these channels join a large system such as Suisun Bay, then any contribution is likely to be rapidly dispersed in the larger volume; however, the channel junction might provide a focal point for consumers, such as fishes, to congregate and feed on material leaving the wetland on ebb tides before it is dispersed in the larger volume. Fishes might also access these resources by entering the wetland. The physics to fish project has established a foundation and several new concepts for understanding how habitat restoration can benefit native fish populations at the local and regional levels. Many of the ideas regarding habitat restoration and channel modifications outlined in this report could help guide management actions that could improve conditions for native fishes at little or no water cost beyond water already dedicated to other management actions. A complete list of products originating from this work is provided in appendix 1.

California↗

Evaluation of the state water-resources research institutes

Water resources research institutes, as authorized by the Water Resources Research Act of 1984 (Public Law 98-242), are located in each state and in the District of Columbia, Guam, Puerto Rico , and the Virgin Islands. Public Law 98-242 mandated an onsite evaluation of each of these institutes to determine whether ' . . .the quality and relevance of its water resources research and its effectiveness as an institution for planning, conducting, and arranging for research warrant its continued support in the national interest. ' The results of these evaluations, which were conducted between September 1985 and June 1987, are summarized. The evaluation teams found that all 54 institutes are meeting the basic objectives of the authorizing legislation in that they: (1) use the grant funds to support research that addresses water problems of state and regional concern; (2) provide opportunities for training of water scientists through student involvement on research projects; and (3) promote the application of research results through preparation of technical reports and contributions to the technical literature. The differences among institutes relate primarily to degrees of effectiveness, and most often are determined by the financial, political, and geographical contexts in which the institutes function and by the quality of their leadership. (Lantz-PTT)

Open-File Report↗

Proceedings of Conference on Status of Geologic Research and Mapping, Death Valley National Park

Welcome to this conference on the “Status of Geologic Research and Mapping in Death Valley National Park.” We organized this conference in an effort to foster communication and increase awareness among parties conducting geologic research in and around the park. Additionally, we hope to assess the status of geologic mapping efforts within the park boundaries in an effort to provide a framework for future discussions regarding the impact and merits of the development of a park-wide geologic map. The topics presented at this meeting reflect the breadth of recent and ongoing geologic research in and near Death Valley National Park. Sessions include (1) regional structure, tectonics, and bedrock geology; (2) Neogene basin stratigraphy, geophysics, and hydrology; (3) posters on mapping in the Death Valley region and topical ones on Death Valley National Park; (4) imagery, Quaternary stratigraphy and geomorphology, and Quaternary geochronology; and (5) paleoclimate and active tectonics. On a one-day field trip to Death Valley, we will visit areas of “type locality” status as well as areas of new research.

Open-File Report↗