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Klamath-Siskiyou herpetofauna: Biogeographic patterns and conservation strategies

The Klamath-Siskiyou region of southwest Oregon and northwest California (USA) has some of the most complex landscape mosaics and plant communities in western North America, reflecting its marked diversity of precipitation and topography. With 38 native species of amphibians and reptiles, the Klamath-Siskiyou region has the most species-rich herpetofauna of any similarly sized mountain range in the Pacific Northwest. Although it is a biodiversity 'hot spot,' there are only two endemic species, both salamanders, in the Klamath-Siskiyou region. High diversity is due to the overlap of two major biogeographic groups: the Arcto- (= northern) and Madro- (= southern) Tertiary herpetofaunas. Many of the amphibians in the Klamath-Siskiyou region are restricted to specialized habitats. Much of our knowledge about the biology of the regional fauna is based on studies elsewhere. Distributional surveys and ecological research are needed to address how the herpetofauna responds to timber harvest and other human activities that may reduce populations and increase fragmentation of suitable habitats. Conservation of the region's diverse herpetofauna should emphasize strategies directed at habitat specialists and species at the latitudinal limits of their ranges.

California, Oregon↗

New indicators of ecological resilience and invasion resistance to support prioritization and management in the sagebrush biome, United States

Ecosystem transformations to altered or novel ecological states are accelerating across the globe. Indicators of ecological resilience to disturbance and resistance to invasion can aid in assessing risks and prioritizing areas for conservation and restoration. The sagebrush biome encompasses parts of 11 western states and is experiencing rapid transformations due to human population growth, invasive species, altered disturbance regimes, and climate change. We built on prior use of static soil moisture and temperature regimes to develop new, ecologically relevant and climate responsive indicators of both resilience and resistance. Our new indicators were based on climate and soil water availability variables derived from process-based ecohydrological models that allow predictions of future conditions. We asked: (1) Which variables best indicate resilience and resistance? (2) What are the relationships among the indicator variables and resilience and resistance categories? (3) How do patterns of resilience and resistance vary across the area? We assembled a large database ( n = 24,045) of vegetation sample plots from regional monitoring programs and derived multiple climate and soil water availability variables for each plot from ecohydrological simulations. We used USDA Natural Resources Conservation Service National Soils Survey Information, Ecological Site Descriptions, and expert knowledge to develop and assign ecological types and resilience and resistance categories to each plot. We used random forest models to derive a set of 19 climate and water availability variables that best predicted resilience and resistance categories. Our models had relatively high multiclass accuracy (80% for resilience; 75% for resistance). Top indicator variables for both resilience and resistance included mean temperature, coldest month temperature, climatic water deficit, and summer and driest month precipitation. Variable relationships and patterns differed among ecoregions but reflected environmental gradients; low resilience and resistance were indicated by warm and dry conditions with high climatic water deficits, and moderately high to high resilience and resistance were characterized by cooler and moister conditions with low climatic water deficits. The new, ecologically-relevant indicators provide information on the vulnerability of resources and likely success of management actions, and can be used to develop new approaches and tools for prioritizing areas for conservation and restoration actions.

Frontiers in Ecology and Evolution↗

Lake nutrient stoichiometry is less predictable than nutrient concentrations at regional and sub-continental scales

Production in many ecosystems is co-limited by multiple elements. While a known suite of drivers associated with nutrient sources, nutrient transport, and internal processing controls concentrations of phosphorus (P) and nitrogen (N) in lakes, much less is known about whether the drivers of single nutrient concentrations can also explain spatial or temporal variation in lake N:P stoichiometry. Predicting stoichiometry might be more complex than predicting concentrations of individual elements because some drivers have similar relationships with N and P, leading to a weak relationship with their ratio. Further, the dominant controls on elemental concentrations likely vary across regions, resulting in context dependent relationships between drivers, lake nutrients and their ratios. Here, we examine whether known drivers of N and P concentrations can explain variation in N:P stoichiometry, and whether explaining variation in stoichiometry differs across regions. We examined drivers of N:P in ~2,700 lakes at a sub-continental scale and two large regions nested within the sub-continental study area that have contrasting ecological context, including differences in the dominant type of land cover (agriculture vs. forest). At the sub-continental scale, lake nutrient concentrations were correlated with nutrient loading and lake internal processing, but stoichiometry was only weakly correlated to drivers of lake nutrients. At the regional scale, drivers that explained variation in nutrients and stoichiometry differed between regions. In the Midwestern U.S. region, dominated by agricultural land use, lake depth and the percentage of row crop agriculture were strong predictors of stoichiometry because only phosphorus was related to lake depth and only nitrogen was related to the percentage of row crop agriculture. In contrast, all drivers were related to N and P in similar ways in the Northeastern U.S. region, leading to weak relationships between drivers and stoichiometry. Our results suggest ecological context mediates controls on lake nutrients and stoichiometry. Predicting stoichiometry was generally more difficult than predicting nutrient concentrations, but human activity may decouple N and P, leading to better prediction of N:P stoichiometry in regions with high anthropogenic activity.

Ecological Applications↗

Guadalupe Bass flow-ecology relationships; with emphasis on the impact of flow on recruitment

Guadalupe Bass Micropterus treculii is an economically and ecologically important black bass species endemic to the Edwards Plateau ecoregion and the lower portions of the Colorado River in central Texas. It is considered a fluvial specialist and as such, there are concerns that the increasing demands being placed upon the water resources of central Texas by growing human populations have the potential to negatively impact Guadalupe Bass populations. Therefore, this study assessed the relationship between Guadalupe Bass growth, feeding ecology, and streamflow. Sagittal otoliths were removed from Guadalupe Bass collected from throughout their range during 2015-2017 and used to estimate the age and back-calculate the growth trajectory of each individual. Additionally, young-of-year (YOY) Guadalupe Bass were collected every 10-14 days from two second-order streams, the North Llano River and South Llano River, in the Colorado Basin on the Edwards Plateau. Stomach contents of these individuals were identified and the effect of streamflow on the occurrence of the taxa comprising the stomach contents assessed. Guadalupe Bass growth was greater in the Colorado and Guadalupe River basins, independent of stream order, and tended to increase with increasing stream order within a basin. Growth was higher in higher stream orders and during years with stable and lower spring and summer monthly median flows, lower minimum and maximum flows, slower rise and fall rates, and higher baseflows. Growth was not influenced by years with higher monthly median flows in winter. These results would seem to contradict previous research, but more likely represent a fuller picture of how Guadalupe Bass respond to flow conditions. The disagreement between the current study and past studies seem to be attributable, at least in part, to the fact that previous studies were conducted during a period of extensive drought, while the current study was conducted during relatively wet conditions. Taken together with previous studies, the current study suggests that Guadalupe Bass growth is sensitive to flow conditions and is lower in years with flow conditions that fall outside a basin- and stream order-specific optimal range for the species. A total of 21 unique taxonomic groups were recovered from the stomachs of YOY Guadalupe Bass collected from the North Llano River and South Llano River. Aquatic insects, especially larval mayflies (Ephemeroptera), damselflies (Odanata: Zygoptera), and caddisflies (Trichoptera), were the most frequently encountered taxa. While there was no difference between the two rivers in stomach content composition, there was a strong longitudinal gradient in both systems with aquatic insects predominating at upstream sample sites and fishes being more common at downstream sites. Stream discharge during the 24 hours prior to collection did not have any influence on the probability of a taxa being found in Guadalupe Bass stomachs. The results of this study support efforts to manage Guadalupe Bass populations at a sub-watershed scale and suggests that populations occupying the same stream order within a basin are likely to have similar responses to annual flow conditions. In addition, these results indicate that the lower Colorado River population may inhabit a unique set of conditions that has supported the development of a trophy Guadalupe Bass fishery. Further, this study highlights the need to incorporate a sufficient range of annual flow conditions to ensure that the influence of stream flow on fish growth is adequately assessed. While interannual variation in growth rates seem to be capable of serving as a proxy for recruitment and year-class strength, long-term monitoring of recruitment paired with assessment of growth is necessary to further clarify the relationship between population density, flow regime, recruitment and growth and allow the construction of predictive models.

Texas↗

Saliendo del circulo vicioso: Gestiones alternativas para garantizar la sostenibilidad de la pesca

The management of fisheries has historically focused on maintaining maximum sustained yields of single species. This approach generally ignored the broader social-ecological context that consists of coupled systems of people and nature, and resulted in the overexploitation of many fisheries globally, including many in Latin America. There are severe negative repercussion of overfishing, on both ecosystems and humans that rely on food and income provided by fisheries. Traditional management schemes based on maximizing should be replaced with approaches that explicitly recognize the coupling of social and ecological systems. We suggest a resilience approach that focuses on tradeoffs as a means of guaranteeing outputs over a broad range of conditions and avoiding undesirable thresholds. Resilience approaches may on average produce lower annual yields, but are more likely to allow the continued provision of multiple goods and services. A resilience approach requires scientifically derived data and consistent monitoring, and will not be successful if feedbacks between ecosystems and humans are ignored. The words "Fisheries" and "Sustainability" do not comprise an oxymoron but a logical partnership in resilience management. People and institutions engaged in Latin-American fisheries management have an opportunity to lead in the development of sustainable fisheries management with a resilience-based approach. Here we describe such an approach, and the steps necessary to ensure success.

Revista Latinoamericana de Recursos Naturales↗

Guidelines for the field evaluation of desert tortoise health and disease

Field evaluation of free-ranging wildlife requires the systematic documentation of a variety of environmental conditions and individual parameters of health and disease, particularly in the case of rare or endangered species. In addition, defined criteria are needed for the humane salvage of ill or dying animals. The purpose of this paper is to describe, in detail, the preparation, procedures, and protocols we developed and tested for the field evaluation of wild desert tortoises ( Gopherus agassizii ). These guidelines describe: preparations for the field, including developing familiarity with tortoise behavior and ecology, and preparation of standardized data sheets; journal notes to document background data on weather conditions, temperature, rainfall, locality, and historic and recent human activities; procedures to prevent the spread of disease and parasites; data sheets for live tortoises to record tortoise identification, location, sex, body measurements and activity; health profile forms for documenting and grading physical abnormalities of tortoise posture and movements, general condition (e.g., lethargy, cachexia), external parasites, and clinical abnormalities associated with shell and upper respiratory diseases; permanent photographic records for the retrospective analysis of progression and regression of upper respiratory and eye diseases, analysis of shell lesions and evaluation of growth and age; and indications and methods for salvaging ill or dying tortoises for necropsy evaluation. These guidelines, tested on 5,000 to 20,000 tortoises over a 10 to 27 yr period, were designed to maximize acquisition of data for demographic, ecological, health and disease research projects; to reduce handling and stress of individual animals; to avoid spread of infectious disease; to promote high quality and consistent data sets; and to reduce the duration and number of field trips. The field methods are adapted for desert tortoise life cycle, behavior, anatomy, physiology, and pertinent disease; however the model is applicable to other species of reptiles. Comprehensive databases of clinical signs of disease and health are crucial to research endeavors and essential to decisions on captive release, epidemiology of disease, translocation of wild tortoises, breeding programs, and euthanasia.

Journal of Wildlife Diseases↗

Cyclic avian mass mortality in the northeastern United States is associated with a novel orthomyxovirus

Since 1998, cyclic mortality events in common eiders ( Somateria mollissima ), numbering in the hundreds to thousands of dead birds, have been documented along the coast of Cape Cod, Massachusetts, USA. Although longitudinal disease investigations have uncovered potential contributing factors responsible for these outbreaks, detecting a primary etiological agent has proven enigmatic. Here we identify a novel orthomyxovirus, tentatively named Wellfleet Bay virus (WFBV), as a potential causative agent of these outbreaks. Genomic analysis of WFBV revealed that it is most closely related to members of the Quaranjavirus genus within the family Orthomyxoviridae . Similar to other members of the genus, WFBV contains an alphabaculovirus gp64-like glycoprotein, which was demonstrated to have fusion activity, and also tentatively suggests that ticks (and/or insects) may vector the virus in nature. However, in addition to the six RNA segments encoding the prototypical structural proteins identified in other quaranjaviruses, a previously unknown RNA segment (segment 7) encoding a novel protein designated as VP7 was discovered in WFBV. Although WFBV shows low to moderate levels of sequence similarity to Quaranfil virus and Johnston Atoll virus , the original members of the Quaranjavirus genus, additional antigenic and genetic analyses demonstrated that it is closely related to the recently identified Cygnet River virus (CyRV) from South Australia, suggesting that WFBV and CyRV may be geographic variants of the same virus. Although the identification of WFBV in part may resolve the enigma of these mass mortality events, the details of the ecology and epidemiology of the virus remain to be determined. Importance The emergence or reemergence of viral pathogens resulting in large-scale outbreaks of disease in humans and/or animals is one of the most important challenges facing biomedicine. For example, understanding how orthomyxoviruses such as novel influenza A virus reassortants and/or mutants emerge to cause epidemic or pandemic disease is at the forefront of current global health concerns. Here we describe the emergence of a novel orthomyxovirus, Wellfleet Bay virus (WFBV), which has been associated with cyclic large-scale bird die-offs in the northeastern United States. This initial characterization study provides a foundation for further research into the evolution, epidemiology, and ecology of newly emerging orthomyxoviruses, such as WFBV, and their potential impacts on animal and/or human health.

Massachusets↗

Alaska

Alaska is the largest state in the Nation, almost one-fifth the size of the combined lower 48 United States, and is rich in natural capital resources. Alaska is often identified as being on the front lines of climate change since it is warming faster than any other state and faces a myriad of issues associated with a changing climate. The cost of infrastructure damage from a warming climate is projected to be very large, potentially ranging from $110 to $270 million per year, assuming timely repair and maintenance. Although climate change does and will continue to dramatically transform the climate and environment of the Arctic, proactive adaptation in Alaska has the potential to reduce costs associated with these impacts. This includes the dissemination of several tools, such as guidebooks to support adaptation planning, some of which focus on Indigenous communities. While many opportunities exist with a changing climate, economic prospects are not well captured in the literature at this time. As the climate continues to warm, there is likely to be a nearly sea ice-free Arctic during the summer by mid-century. Ocean acidification is an emerging global problem that will intensify with continued carbon dioxide (CO 2 ) emissions and negatively affects organisms. Climate change will likely affect management actions and economic drivers, including fisheries, in complex ways. The use of multiple alternative models to appropriately characterize uncertainty in future fisheries biomass trajectories and harvests could help manage these challenges. As temperature and precipitation increase across the Alaska landscape, physical and biological changes are also occurring throughout Alaska’s terrestrial ecosystems. Degradation of permafrost is expected to continue, with associated impacts to infrastructure, river and stream discharge, water quality, and fish and wildlife habitat. Longer sea ice-free seasons, higher ground temperatures, and relative sea level rise are expected to exacerbate flooding and accelerate erosion in many regions, leading to the loss of terrestrial habitat in the future and in some cases requiring entire communities or portions of communities to relocate to safer terrain. The influence of climate change on human health in Alaska can be traced to three sources: direct exposures, indirect effects, and social or psychological disruption. Each of these will have different manifestations for Alaskans when compared to residents elsewhere in the United States. Climate change exerts indirect effects on human health in Alaska through changes to water, air, and soil and through ecosystem changes affecting disease ecology and food security, especially in rural communities. Alaska’s rural communities are predominantly inhabited by Indigenous peoples who may be disproportionately vulnerable to socioeconomic and environmental change; however, they also have rich cultural traditions of resilience and adaptation. The impacts of climate change will likely affect all aspects of Alaska Native societies, from nutrition, infrastructure, economics, and health consequences to language, education, and the communities themselves. The profound and diverse climate-driven changes in Alaska’s physical environment and ecosystems generate economic impacts through their effects on environmental services. These services include positive benefits directly from ecosystems (for example, food, water, and other resources), as well as services provided directly from the physical environment (for example, temperature moderation, stable ground for supporting infrastructure, and smooth surface for overland transportation). Some of these effects are relatively assured and in some cases are already occurring. Other impacts are highly uncertain, due to their dependence on the structure of global and regional economies and future human alterations to the environment decades into the future, but they could be large. In Alaska, a range of adaptations to changing climate and related environmental conditions are underway and others have been proposed as potential actions, including measures to reduce vulnerability and risk, as well as more systemic institutional transformation.

Report↗

Effects of anthropogenic developments on common Raven nesting biology in the west Mojave Desert

Subsidized predators may affect prey abundance, distribution, and demography. Common Ravens (Corvus corax) are anthropogenically subsidized throughout their range and, in the Mojave Desert, have increased in number dramatically over the last 3-4 decades. Human-provided food resources are thought to be important drivers of raven population growth, but human developments add other features as well, such as nesting platforms. From 1996 to 2000, we examined the nesting ecology of ravens in the Mojave Desert, relative to anthropogenic development. Ravens nested disproportionately near point sources of food and water subsidies (such as towns, landfills, and ponds) but not near roads (sources of road-killed carrion), even though both sources of subsidy enhanced fledging success. Initiation of breeding activity was more likely when a nest from the previous year was present at the start of a breeding season but was not affected by access to food. The relative effect of environmental modifications on fledging success varied from year to year, but the effect of access to humanprovided resources was comparatively consistent, suggesting that humans provide consistently high-quality breeding habitat for ravens. Anthropogenic land cover types in the desert are expected to promote raven population growth and to allow ravens to occupy parts of the desert that otherwise would not support them. Predatory impacts of ravens in the Mojave Desert can therefore be considered indirect effects of anthropogenic development.

California↗

Does urbanization influence the spatial ecology of Gila monsters in the Sonoran Desert?

To assess whether urbanization influences the spatial ecology of a rare and protected venomous reptilian predator, the Gila monster Heloderma suspectum , we compared home range (HR) size and movement parameters at three sites varying in degree of urbanization in the Sonoran Desert. We predicted that the urban population of H. suspectum would exhibit smaller HRs, avoid human structures and show less movement. Multivariate analysis indicated that males generally exhibited larger HRs and had higher movement rates and activity levels than females at all three sites. Contrary to our predictions, however, HR size and movement parameters did not vary across the sites in relation to the level of urbanization. At the urban site, individuals often crossed narrow roads and regularly used artificial structures as refuges for extended periods. Furthermore, the population sex ratio at the urban site was female-biased, consistent with the expectation that occupation of larger HRs and higher movement rates results in higher mortality for males in urbanized areas. Gila monsters did not appear to alter certain aspects of their spatial ecology in response to low levels of human activity but additional work will be required to assess population viability and possible effects in the long term and with higher levels of urbanization.

Arizona↗

Conceptual ecological models to guide integrated landscape monitoring of the Great Basin

The Great Basin Integrated Landscape Monitoring Pilot Project was developed in response to the need for a monitoring and predictive capability that addresses changes in broad landscapes and waterscapes. Human communities and needs are nested within landscapes formed by interactions among the hydrosphere, geosphere, and biosphere. Understanding the complex processes that shape landscapes and deriving ways to manage them sustainably while meeting human needs require sophisticated modeling and monitoring. This document summarizes current understanding of ecosystem structure and function for many of the ecosystems within the Great Basin using conceptual models. The conceptual ecosystem models identify key ecological components and processes, identify external drivers, develop a hierarchical set of models that address both site and landscape attributes, inform regional monitoring strategy, and identify critical gaps in our knowledge of ecosystem function. The report also illustrates an approach for temporal and spatial scaling from site-specific models to landscape models and for understanding cumulative effects. Eventually, conceptual models can provide a structure for designing monitoring programs, interpreting monitoring and other data, and assessing the accuracy of our understanding of ecosystem functions and processes.

Scientific Investigations Report↗

Cape Romain partnership for coastal protection

This final report summarizes activities, outcomes, and lessons learned from a 3-year project titled “Climate Change Adaptation for Coastal National Wildlife Refuges” with the Cape Romain National Wildlife Refuge (NWR) and local partners in the surrounding South Carolina Lowcountry. The Lowcountry is classified as the 10-county area encompassing the coastal plain of South Carolina (this report specifically focuses on Berkeley, Charleston, and Georgetown Counties). The goals of this work, sponsored by the U.S. Geological Survey’s Southeast Climate Adaptation Science Center (SECASC), were to foster active engagement with stakeholders; to develop a comprehensive definition of adaptation problems faced by agencies, organizations, and individuals near the Cape Romain NWR that accounts for global change, local values, knowledge and perceptions; and to encourage social learning and building of effective networks and trust across South Carolina Lowcountry organizations and individuals. Although project scoping began at the scale of the Atlantic seaboard, by engaging with NWRs from Massachusetts to Florida, participating refuge personnel eventually selected the Cape Romain NWR to serve as a case study for testing our goals. The Cape Romain Partnership for Coastal Conservation was established to address global change impacts at a regional level and includes representation from Federal and State resource agencies, local conservation nongovernmental organizations, and organizations representing underserved community interests. Research topics, originating from discussions with Cape Romain Partnership for Coastal Conservation members, focused on quantifying key drivers of change including localized sea-level rise (SLR) predictions, estimates of coastal hurricane inundation as amplified by SLR, and urban growth trends and forecasts. These key drivers provided a foundation to engage stakeholders in planning exercises to begin a process of collective understanding and collaborative decision making. The goal of this process was to develop collective strategies of adaptation to enhance community and ecosystem resilience in the South Carolina Lowcountry. South Carolina’s Lowcountry is experiencing rapid environmental and social transformation because of SLR rates approaching twice the global average, chronic tidal flooding and catastrophic storm surges, erosion and loss of habitats that provide essential services to wildlife and humans, and increasing social polarization fueled by aggressive low-density urban growth and other forms of land conversion. To support characterizations of plausible future scenarios, we used available or, in some cases, developed new models to project future conditions of key environmental and social-economic drivers. Because of the imprecision of mean global SLR projections, the SECASC commissioned a climatological study to account for local conditions and multiple representative concentration pathways to project a tailored distribution of future sea levels. These projections were matched to SLR scenarios provided by existing models to anticipate the range of future coastal habitat changes in the South Carolina Lowcountry. SLR scenarios were also incorporated into existing storm-surge models, which do not account for alternate baseline sea levels, to project the local effects of future hurricanes. To evaluate the extent and effects of population growth and urban expansion, we relied on an existing urban-growth model to map the spatial distribution of land-conversion probabilities, the total area of which is predicted to increase twofold to threefold over the next 60 years. In addition to this simplified model, an econometric model is in development to account for nonlinear feedback dynamics in land value, land use, and ecosystem service production. Although not yet completed, the goals of this model are to produce more-detailed projections of growth dynamics and to allow predictions of development patterns resulting from alternate land-use planning policies and incentives. Collaborative planning for an uncertain future requires more than providing decision makers with information on future physical and ecological conditions; developing effective and consensual strategies must also integrate sociological values, multiple cultural perspectives, and an understanding of human behavior. To support broad stakeholder engagement in integrative approaches to adaptation planning, emphasis was placed on the importance of considering differences in how individuals perceive their environment and create meaning. Because cultural frameworks form the basis for perceptions and, ultimately, the behaviors of individuals and institutions, we describe a model of human behavior and how it can be used to understand the effect of cultural complexity and variation in perception on choices, behavioral change, and long-term maintenance of behaviors. We consider a model commonly used in the field of behavioral health that accommodates variation in human perception when describing stages of behavior and the dynamics of behavioral change. Tailoring communication and engagement activities to targeted stakeholders is likely to benefit from increased understanding of behavioral change processes. The complex nature of this problem limited the usefulness of a traditional decision-analytic approach, we explored alternative methods for engagement, collaborative learning and decision making. Recognizing that project partners and Lowcountry stakeholders may be at different stages of preparedness and interest level for modifying behavior as a function of global change, we facilitated a scenario-planning exercise to familiarize partners with this well-established approach for communicating the opportunities and threats arising under alternative, plausible futures. We developed narratives for four alternative South Carolina Lowcountry scenarios to be used in later strategic planning that focus on quantitative trends for three primary drivers with high impact and high uncertainty: manifestations of climate change, social-political shifts at a global level, and forces of local value and power structures. This scenario-planning exercise underscored the complex relation between the temporospatial scale of the production of ecological goods and services and the institutional scale at which they are managed. We then guided the partners through an assessment of the relevant strengths and weaknesses of the Cape Romain Partnership for Coastal Protection, using the threats and opportunities characterized by each scenario to understand how the partnership might respond when attempting to meet conservation and societal objectives. The partnership identified key strengths including partnership experience, outreach and technical capacities, a substantial conservation land base, and high social cohesion in the South Carolina Lowcountry. Limited communication expertise, institutional inertia, and insufficient staffing and funding were recognized as important weaknesses across the partnership. By examining and scoring combinations of internal strengths and weaknesses and external threats and opportunities, the partnership developed sets of prioritized strategies to consider in the context of a given scenario. Although we had insufficient time to examine all scenarios in detail, the intent was to identify a portfolio of strategic actions to address threats and opportunities represented in multiple plausible futures. Top-ranking strategies encompassed a range of actions that focused on strengthening the conservation community and communicating the benefits of nature (that is, ecosystem services) to leveraging partnerships to expand land protection. This report also details the methods and preliminary results of several models developed or applied in support of this project. Two parcel-selection algorithms were used to evaluate anticipated habitat changes and patterns of urban growth to guide decisions on optimal conservation reserve design to protect habitat communities. One approach used a widely available planning software (MARXAN) to maximize conservation benefits near the Cape Romain NWR, whereas the other approach was a novel application of economic theory to account for uncertainty in future conditions and for the risks of unanticipated habitat loss. This latter model applies modern portfolio theory to estimate the risk of investing in any portfolio of land parcels (that is, candidate “reserves”) under climate-change uncertainty by quantifying the variation and spatial correlation of conservation benefits derived from each portfolio. We expanded the range of actions beyond simply whether or not to invest in a set of land parcels, an approach commonly used in spatial conservation planning, to also include consideration of divestment from currently protected lands. Such refinements allow for better accounting of system dynamics and can evaluate the benefits of flexible conservation tools such as rolling easements. Model results were conditional on a decision maker’s risk tolerance but highlighted general strategies of land conservation to increase future habitat representation beyond what is expected under the current protected land base. We built models that may help inform coastal planning by estimating salinity dynamics and the performance of oyster reef restoration efforts to predict the combined effects of global change and management of freshwater flows on coastal habitats and the processes that contribute to their resilience. These models can support restoration decisions by evaluating the expected benefits of site locations for shoreline protection and fisheries production. Lastly, we developed a spatially explicit economic model that predicts feedback dynamics among land value, land-use change, and effects on ecosystem service provision to explore zoning policies and incentives on urban growth and ecosystem services. We summarize these efforts with insights and considerations for the Cape Romain Partnership for Coastal Protection to continue to engage stakeholders in effective adaptation planning. First, notions of place attachment (referred to as sense of place), and the role of culture in social discourse are increasingly being used to understand the complex interactions between society and the environment and how societies respond and adapt to climate change. Sense of place was a unifying theme whenever the future of the South Carolina Lowcountry was discussed. The contribution of the South Carolina Lowcountry’s environmental wealth, rich cultural heritage, and quality of life to sense of place has important implications for how adaptation planning might best be pursued. More community-based governance of the commons (in other words, natural and cultural resources held in common), in which broad stakeholder participation and power sharing are key elements, is considered important. This devolution of governance is characterized by polycentric institutions and self-organizing social networks that promote a local culture of knowledge sharing, problem solving, and learning. These so-called bridging organizations (or individuals) often provide the leadership necessary to bring together potentially disparate Government agencies and institutions, private organizations, and individuals in a collective process of problem solving. Our observations also suggest that the conservation community in the South Carolina Lowcountry views its activities as integral to the broader governance of social-ecological systems, in which responses to the forces of global change are mediated through culture, economics, and politics. Rather than directly competing with other interests, the South Carolina Lowcountry conservation community seems to embrace an interpretation of conservation in which the fundamental objective is the quality of human life rather than environmental protection. Fundamental to the types of governance reforms described above is the notion of coproduction, in which experts and users collaborate to develop a shared body of knowledge. In this approach, scientists work with stakeholders to help frame questions, design research, and collect and analyze data. Such sustained collaborations are increasingly believed to be an effective way to produce useable (or actionable) science. The emphasis on social learning, leveraging strong social networks, coordinating and deliberating among diverse stakeholders, and applying principles of adaptive management is an essential contribution to adaptive capacity. The diverse and robust set of scientific approaches, methods to help stakeholders collaborate in effective and goal-driven planning processes, and decision tools resulting from this project hopefully will assist Cape Romain NWR and its partners prepare for climatic, ecological, and social changes over the coming decades.

South Carolina↗

Development of a multimetric index for integrated assessment of salt marsh ecosystem condition

Tools for assessing and communicating salt marsh condition are essential to guide decisions aimed at maintaining or restoring ecosystem integrity and services. Multimetric indices (MMIs) are increasingly used to provide integrated assessments of ecosystem condition. We employed a theory-based approach that considers the multivariate relationship of metrics with human disturbance to construct a salt marsh MMI for five National Parks in the northeastern USA. We quantified the degree of human disturbance for each marsh using the first principal component score from a principal components analysis of physical, chemical, and land use stressors. We then applied a metric selection algorithm to different combinations of about 45 vegetation and nekton metrics (e.g., species abundance, species richness, and ecological and functional classifications) derived from multi-year monitoring data. While MMIs derived from nekton or vegetation metrics alone were strongly correlated with human disturbance ( r values from −0.80 to −0.93), an MMI derived from both vegetation and nekton metrics yielded an exceptionally strong correlation with disturbance ( r = −0.96). Individual MMIs included from one to five metrics. The metric-assembly algorithm yielded parsimonious MMIs that exhibit the greatest possible correlations with disturbance in a way that is objective, efficient, and reproducible.

Estuaries and Coasts↗

The ecological - Societal underpinnings of Everglades restoration

The biotic integrity of the Florida Everglades, a wetland of immense international importance, is threatened as a result of decades of human manipulation for drainage and development. Past management of the system only exacerbated the problems associated with nutrient enrichment and disruption of regional hydrology. The Comprehensive Everglades Restoration Plan (CERP) now being implemented by Federal and State governments is an attempt to strike a balance between the needs of the environment with the complex management of water and the seemingly unbridled economic growth of southern Florida. CERP is expected to reverse negative environmental trends by "getting the water right", but successful Everglades restoration will require both geochemical and hydrologic intervention on a massive scale. This will produce ecological trade-offs and will require new and innovative scientific measures to (1) reduce total phosphorus concentrations within the remaining marsh to 10 ??g/L or lower; (2) quantify and link ecological benefits to the restoration of depths, hydroperiods, and flow velocities; and (3) compensate for ecological, economic, and hydrologic uncertainties in the CERP through adaptive management. ?? The Ecological Society of America.

Conference Paper↗

Design approaches in quarrying and pit-mining reclamation

Reclaimed mine sites have been evaluated so that the public, industry, and land planners may recognize there are innovative designs available for consideration and use. People tend to see cropland, range, and road cuts as a necessary part of their everyday life, not as disturbed areas despite their high visibility. Mining also generates a disturbed landscape, unfortunately one that many consider waste until reclaimed by human beings. The development of mining provides an economic base and use of a natural resource to improve the quality of human life. Equally important is a sensitivity to the geologic origin and natural pattern of the land. Wisely shaping out environment requires a design plan and product that responds to a site's physiography, ecology, function, artistic form, and publication perception. An examination of selected sites for their landscape design suggested nine approaches for mining reclamation. The oldest design approach around is nature itself. Humans may sometimes do more damage going to an area in the attempt to repair it. Given enough geologic time, a small-site area, and stable adjacent ecosystems, disturbed areas recover without mankind's input. Visual screens and buffer zones conceal the facility in a camouflage approach. Typically, earth berms, fences, and plantings are used to disguise the mining facility. Restoration targets social or economic benefits by reusing the site for public amenities, most often in urban centers with large populations. A mitigation approach attempts to protect the environment and return mined areas to use with scientific input. The reuse of cement, building rubble, macadam meets only about 10% of the demand from aggregate. Recognizing the limited supply of mineral resources and encouraging recycling efforts are steps are steps in a renewable resource approach. An educative design approach effectively communicates mining information through outreach, land stewardship, and community service. Mine sites used for art show a celebration of beauty and experience -- abstract geology. The last design approach combines art and science in a human-nature ecosystem termed integration. With environmental concerns, an operating or reclaimed mine site can no longer be considered isolated from its surroundings. Site analysis of mine works needs to go beyond site-specific information and relate to the regional context of the greater landscape. Understanding design approach can turn undesirable features (mines and pits) into something perceived as desirable by the public.

Book↗

Long-term ecosystem and biogeochemical research in Loch Vale watershed, Rocky Mountain National Park, Colorado

Loch Vale watershed was instrumented in 1983 with initial support from the National Acid Precipitation Assessment Program to ask whether ecosystems of Rocky Mountain National Park (RMNP) were affected by acidic atmospheric deposition. Research and monitoring activities were expanded in 1991 by the U.S. Geological Survey Water, Energy, and Biogeochemical Budgets program to understand the processes, and their interactions, controlling water, energy, and biogeochemical fluxes. With help from many collaborators we have characterized trends and patterns in atmospheric deposition, climate, and hydrology, including glaciers and other ice features. Instead of acidic deposition, we documented high atmospheric inputs of reactive nitrogen (Nr), and have studied the ecological consequences in soils, surface water, and vegetation. Using paleolimnology, we documented the onset of human-caused change to lake primary producers ca. 1950 in response to increased Nr deposition and warming. Our results provided the basis for the Colorado Nitrogen Deposition Reduction Plan, a state policy that aims to reduce Nr emissions to protect resources in RMNP by 2032. Carbon cycle research revealed mountain wetlands now release more carbon than they store, and respiration and methane flux occurs even during winter through deep snow packs. Trend analyses found export of Nr to be closely tied to atmospheric inputs, but can lag in response to drought. Current research explores consequences of the combination of warming, changes in precipitation dynamics, and atmospheric deposition of Nr and dust on stream and lake CO 2 dynamics, lake biology and trophic state, and soil carbon composition. Dramatic increases in park visitors have prompted studies on the effects of recreational use on water quality. New tools such as remote sensing and high frequency instream water quality sensors are being applied to lake and stream studies. Monitoring, combined with experiments, models, and spatial comparisons is an essential foundation for science-based resource management.

Colorado↗

Manatees as sentinels of marine ecosystem health: are they the 2000-pound canaries?

The order Sirenia is represented by three species of manatees and one species of dugong distributed in tropical and subtropical regions of the world and considered vulnerable to extinction. The sentinel species concept is useful to identify indicators of the environment and may reflect the quality of health in marine ecosystems. The single species approach to evaluate ecological health may provide a series of “snap shots” of environmental changes to determine if animal, human, or ecosystem health may be affected. Under this concept, marine vertebrates may be good integrators of changes over space and time, and excellent sentinels of ecosystem health. Based on their life history, manatees may or may not be ideal sentinels, as they are robust, long-lived species and appear remarkably resilient to natural disease and the effects of human-related injury and trauma. These characteristics might be the result of an efficient and responsive immune system compared to other marine mammals. Although relatively immune to infectious agents, manatees face other potentially serious threats, including epizootic diseases and pollution while in large aggregations. Manatees can serve as excellent sentinels of harmful algal blooms due to their high sensitivity, specifically to brevetoxicosis, which has caused at least two major die-offs in recent times. Threats to manatees worldwide, such as illegal hunting and boat collisions, are increasing. Habitat is being lost at an alarming rate and the full effects of uncontrolled human population growth on the species are unknown. The manatee may serve as a sentinel species, prognosticating the deleterious effects of unhealthy marine and aquatic ecosystems on humans. We have identified a number of critical research needs and opportunities for transdisciplinary collaboration that could help advance the use of the sentinel species concept in marine ecosystem health and monitoring of disease emergence using our knowledge on these magnificent sirenians.

EcoHealth↗

Measuring and mapping the topography of the Florida Everglades for ecosystem restoration

One of the major issues facing ecosystem restoration and management of the Greater Everglades is the availability and distribution of clean, fresh water. The South Florida ecosystem encompasses an area of approximately 28,000 square kilometers and supports a human population that exceeds 5 million and is continuing to grow. The natural systems of the Kissimmee-Okeechobee-Everglades watershed compete for water resources primarily with the region's human population and urbanization, and with the agricultural and tourism industries. Surface water flow modeling and ecological modeling studies are important means of providing scientific information needed for ecosystem restoration planning and modeling. Hydrologic and ecological models provide much-needed predictive capabilities for evaluating management options for parks, refuges, and land acquisition and for understanding the impacts of land management practices in surrounding areas. These models require various input data, including elevation data that very accurately define the topography of the Florida Everglades.

Florida↗