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Mapping potential sensitivity to hydrogeomorphic change in the UMRS riverscape

In 2020 the U.S. Geological Survey (USGS), as part of the Upper Mississippi River Restoration (UMRR) Program, began a new project to characterize potential hydrogeomorphic change associated with hydrogeomorphic units (HGUs) and their catenae (units linked by their association with sediment sources and flow origins). The goal of the project was to develop a geographic information system (GIS) database of HGUs for the Upper Mississippi River System (UMRS) available to both scientists and river managers working on UMRR studies and HREP planning and design studies. The characterization was based on a hydrogeomorphic change hierarchical classification developed previously for the UMRS. The products were generated with automated techniques in a GIS using systemic datasets. Landforms were mapped from the 2015 UMRS topobathymetric dataset with geomorphon (shape-based) tools tailored for the large riverscape, valley bottom environments in the UMRS. A clustering analysis was applied to the resulting landforms to identify HGUs associated with zones of perennial low flows, bankfull flows, and overbank floodplains. Catenae were assembled based on the proximity of the units to the main channel, tributary mouths, and side channels from previously published aquatic areas (USACE, 2018) coupled with least-cost flowpath linkages between potential sediment origins and planform change units developed by Rogala, Fitzpatrick, and Henderson (2020). These GIS-based analyses were successful at identifying a range of HGUs using an automated technique with available data across the entire riverscape, with emphasis on those that have the potential for hydrogeomorphic change. Most of the resulting features are depositional, as expected in a large river system. However, this is the first attempt of linking tributary inputs, side channel erosion and levee breaches with their depositional counterparts. The approach was successfully piloted in Pools 8 and 10 in the Upper Impounded Reach and Pool 14 in the Lower Impounded Reach, with next steps for application in reaches of the unimpounded section and Illinois River. This report emphasizes results from Pool 10, which was the focus of most of our attention during the pilot phase.

Illinois, Indiana, Iowa, Minnesota, Missouri, Sout↗

An inset groundwater-flow model to evaluate the effects of layering configuration on model calibration and assess managed aquifer recharge near Shellmound, Mississippi

The U.S. Geological Survey has developed a high-resolution inset groundwater-flow model in the Mississippi Delta as part of an interdisciplinary collaboration coordinated by the Mississippi Alluvial Plain project to provide a tool that stakeholders can use to support water-resource management decisions. Groundwater withdrawals from the Mississippi River Valley alluvial (MRVA) aquifer have been vital to support agricultural production in the region, but substantial groundwater-level declines near Shellmound, Mississippi, have caused concerns for long-term sustainability of the aquifer. To better understand the subsurface and try to mitigate the long-term groundwater-level declines, stakeholders have undertaken actions including a Groundwater Transfer and Injection Pilot (GTIP) project using a riverbank filtration-based managed aquifer recharge approach. The pilot project consisted of extracting groundwater near the Tallahatchie River and reinjecting it into the aquifer 3 kilometers west where water levels have substantially declined. A high-resolution airborne electromagnetic (AEM) survey was also completed to collect electrical resistivity data to support the GTIP project and the development of the groundwater model. The inset groundwater-flow model was developed to (1) integrate the AEM data into the optimal layering configuration of the MRVA aquifer that the available observation data can support through calibration, and (2) assess the potential effect of the GTIP project on the groundwater levels. The AEM data were processed into three different layering configurations leading to the development of model A (18 layers), model B (16 layers), and model C (8 layers), all at a 100- x 100-meter cell spatial resolution using the U.S. Geological Survey modular finite-difference flow model 6 code with Newton-Raphson formulation. The model development process integrated recent advances in modeling, such as the incorporation of AEM data, the use of outputs from the soil-water-balance (SWB) model, and the Aquaculture and Irrigation Water-Use Model, and was facilitated by robust automation using the open-source python packages Modflow-setup and SFRmaker. Using Parameter Estimation ++ Iterative Ensemble Smoother, the three numerical groundwater-flow models (models A, B, and C) were calibrated against a set of observations, which included aquifer groundwater levels, streamflows, stream stage, and aquifer transmissivity. Results indicate that the detailed representation of MRVA aquifer layers in model A produced the best calibrated model by history matching, and the integration of data representing surficial connectivity played a key role in improving groundwater recharge and enhancing the ability of the model to match groundwater levels in the cone of depression. A forecast model simulated the managed aquifer recharge approach, and the results indicated that, given average irrigation and recharge conditions (2010–15), the GTIP project has the potential to induce groundwater-level increases of as much as 3 meters around the injection site, but a sustained increase would require repetition in subsequent years of water transfer at 2022 rates or above.

Mississippi↗

Effects of Water-Management Strategies on Water Resources in the Pawcatuck River Basin, Southwestern Rhode Island and Southeastern Connecticut

The Pawcatuck River Basin in southwestern Rhode Island and southeastern Connecticut is an important high-quality water resource for domestic and public supplies, irrigation, recreation, and the aquatic ecosystem. Concerns about the effects of water withdrawals on aquatic habitat in the basin have prompted local, State, and Federal agencies to explore water-management strategies that minimize the effects of withdrawals on the aquatic habitat. As part of this process, the U.S. Geological Survey in cooperation with the U.S. Department of Agriculture Natural Resources Conservation Service and the Rhode Island Water Resources Board completed a study to assess the effects of current (2000-04) and potential water withdrawals on streamflows and groundwater levels using hydrologic simulation models developed for the basin. The major findings of the model simulations are: *Moving highly variable seasonal irrigation withdrawals from streams to groundwater wells away from streams reduces short-term fluctuations in streamflow and increases streamflow in the summer when flows are lowest. This occurs because of the inherent time lag between when water is withdrawn from the aquifer and when it affects streamflow. *A pumped well in the vicinity of small streams indicates that if withdrawals exceed available streamflow, groundwater levels drop substantially as a consequence of water lost from aquifer storage, which may reduce the time wetlands and vernal pools are saturated, affecting the animal and plant life that depend on these habitats. *The effects of pumping on water resources such as ponds, streams, and wetlands can be minimized by relocating pumping wells, implementing seasonal pumping schemes that utilize different wells and pumping rates, or both. *The effects of projected land-use change, mostly from forest to low- and medium density housing, indicate only minor changes in streamflow at the subbasin scale examined; however, at a local scale, high flows could increase, and low flows could decrease as a result of increased impervious area. In some instances, low flows could increase slightly as a result of decreased evapotranspiration from the loss of deeprooted vegetation (forest) associated with development. *In some subbasins where large areas of agricultural lands were converted to low- and medium-density housing, low flows increase because the consumptive domestic water use was projected to be less than consumptive agricultural water use. All agricultural water use was for irrigation purposes and was assumed to be lost from the basin through evapotranspiration.

Circular↗

The geohydrologic system and probable effects of mining in the Sand Creek-Hanks lignite area, western Williams County, North Dakota

The investigation was undertaken to define the geohydrology of the Sand Creek-Hanks area and to project probable hydrologic effects of lignite mining on the area. Aquifers occur in sandstone beds in the Fox Hills Sandstone and the Hell Creek Formation of Cretaceous age and in sandstone lenses and lignite beds in the Tongue River and Sentinel Butte Members of the Fort Union Formation of Tertiary age. The top of the Fox Hills aquifer ranges from about 1,200 to 2,000 feet below land surface. Yields of wells completed in the aquifer could be as much as 60 gallons per minute. Water in the Fox Hills aquifer is a sodium bicarbonate type and generally Depths to the top of the Hell Creek aquifer range from about 900 to 1,600 feet. Well yields range from less than 10 to 40 gallons per minute. Water in the aquifer is a sodium bicarbonate type and generally contains between 1,000 and 2,200 milligrams per liter dissolved solids. Depths to aquifers in the Tongue River and Sentinel Butte Members of Fort Union Formation range from near land surface to about 1,000 feet below land surface. Wells completed in the aquifers may yield as much as 40 gallons per minute of sodium bicarbonate or a sodium sulfate type water that contains about 800 to 4,100 milligrams per liter dissolved solids. Glacial drift covers most of the study area. The drift thickness ranges from a veneer to about 380 feet. Well yields range from a few gallons per minute to 900 gallons per minute. Dissolved-solids concentrations in water from the glacial drift generally range from 477 to 2,050 milligrams per liter. Mining of lignite will destroy all aquifers in and above the mined lignite and will expose overburden to oxidation. Leaching will cause an increase in dissolved solids in ground water immediately beneath the mines and possibly will cause some increase in the dissolved solids in low flows in area streams.

North Dakota↗

Water-quality assessment of the Lower Susquehanna River Basin, Pennsylvania and Maryland: sources, characteristics, analysis and limitations of nutrient and suspended-sediment data, 1975-90

This report describes analyses of available information on nutrients and suspended sediment collected in the Lower Susquehanna River Basin during water years 1975-90. Most of the analyses were applied to data collected during water years 1980-89. The report describes the spatial and temporal availability of nutrient and suspended-sediment data and presents a preliminary concept of the spatial and temporal patterns of concentrations and loads within the basin. Where data were available, total and dissolved forms of nitrogen and phosphorus species from precipitation, surface water, ground water, and springwater, and bottom material from streams and reservoirs were evaluated. Suspended-sediment data from streams also were evaluated. The U.S. Geological Survey National Water Information System (NWIS) database was selected as the primary database for the analyses. Precipitation-quality data from the National Atmospheric Deposition Program (NADP) and bottom-material-quality data from the National Uranium Resource Evaluation (NURE) were used to supplement the water-quality data from NWIS. Concentrations of nutrients were available from 3 precipitation sites established for longterm monitoring purposes, 883 wells (854 synoptic areal survey sites and 29 project and research sites), 23 springs (17 synoptic areal survey sites and 6 project and research sites), and 894 bottom-material sites (840 synoptic areal survey sites and 54 project and research sites). Concentrations of nutrients and (or) suspended sediment were available from 128 streams (36 long-term monitoring sites, 51 synoptic areal survey sites, and 41 project and research sites). Concentrations of nutrients and suspended sediment in streams varied temporally and spatially and were related to land use, agricultural practices, and streamflow. A general north-to-south pattern of increasing median nitrate concentrations, from 2 to 5 mg/L, was detected in samples collected in study unit streams. In streams that drain areas dominated by agriculture, concentrations of nutrients and suspended sediment tend to be elevated with respect to those found in areas of other land-use types and are related to the amount of commercial fertilizer and animal manure applied to the area drained by the streams. Animal manure is the dominant source of nitrogen for the streams in the lower, agricultural part of the basin. Concentrations of nutrients in samples from wells varied with season and well depth and were related to hydrogeologic setting. Median concentrations of nitrate were 2.5 and 3.5 mg/L for wells drawing water at depths of 0 to 100 ft and 101 to 200 ft, respectively. The lowest median concentrations for nitrate in ground water from wells were generally found in siliciclastic-bedrock, forested settings of the Ridge and Valley Physiographic Province, and the highest were found in carbonate-bedrock agricultural settings of the Piedmont Physiographic Province. Twenty-five percent of the measurements from wells in carbonate rocks in the Piedmont Physiographic Province exceeded the Pennsylvania drinking-water standard. An estimate of mass balance of nutrient loads within the Lower Susquehanna River Basin was produced by combining the available information on stream loads, atmosphericdeposition loads, commercial-fertilizer applications, animal-manure production, privateseptic-system nonpoint-source loads, and municipal and industrial point-source loads. The percentage of the average annual nitrate load carried in base flow of streams in the study unit ranged from 45 to 76 percent, and the average annual phosphorus load carried in base flow ranged from 20 to 33 percent. Average annual yields of nutrients and suspended sediment from tributary basins are directly related to percentage of drainage area in agriculture and inversely to drainage area. Information required to compute loads of nitrogen and phosphorus were available for all sources except atmospheric deposition, for which only nitrogen data were available. Atmospheric deposition is the dominant source of nitrogen for the mostly forested basins draining the upper half of the study unit. The estimate of total annual nitrogen load to the study unit from precipitation is 98.8 million pounds. Nonpoint and point sources of nutrients were estimated. Nonpoint and point sources combined, including atmospheric deposition, provide a potential annual load of 390 million pounds of nitrogen and 79.5 million pounds of phosphorus. The range of percentages of the estimated nonpoint and point sources that were measured in the stream was 20 to 47 percent for nitrogen and 6 to 14 percent for phosphorus. On the average, the Susquehanna River discharges 141,000 pounds of nitrogen and 7,920 pounds of phosphorus to the Lower Susquehanna River reservoir system each year. About 98 percent of the nitrogen and 60 percent of the phosphorus passes through the reservoir system. Interpretations of available water-quality data and conclusions about the water quality of the Lower Susquehanna River Basin were limited by the scarcity of certain types of water-quality data and current ancillary data. A more complete assessment of the water quality of the basin with respect to nutrients and suspended sediment would be enhanced by the availability of additional data for multiple samples over time from all water environments; samples from streams in the northern and western part of the basin; samples from streams and springs throughout the basin during high base-flow or stormflow conditions; and information on current land-use, and nutrient loading from all types of land-use settings.

Maryland, Pennsylvania↗

Groundwater quality in the Mojave area, California

Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to groundwater-quality information. Four groundwater basins along the Mojave River make up one of the study areas being evaluated. The Mojave study area is approximately 1,500 square miles (3,885 square kilometers) and includes four contiguous groundwater basins: Upper, Middle, and Lower Mojave River Groundwater Basins, and the El Mirage Valley (California Department of Water Resources, 2003). The Mojave study area has an arid climate, and is part of the Mojave Desert. Average annual rainfall is about 6 inches (15 centimeters). Land use in the study area is approximately 82 percent (%) natural (mostly shrubland), 4% agricultural, and 14% urban. The primary crops are pasture and hay. The largest urban areas are the cities of Victorville, Hesperia, and Apple Valley (2010 populations of 116,000, 90,000 and 69,000, respectively). Groundwater in these basins is used for public and domestic water supply and for irrigation. The main water-bearing units are gravel, sand, silt, and clay derived from surrounding mountains. The primary aquifers in the Mojave study area are defined as those parts of the aquifers corresponding to the perforated intervals of wells listed in the California Department of Public Health database. Public-supply wells in the Mojave study area are completed to depths between 200 and 600 feet (18 to 61 meters), consist of solid casing from the land surface to a depth of 130 to 420 feet (40 to 128 meters), and are screened or perforated below the solid casing. Recharge to the groundwater system is primarily runoff from the mountains to the south, mostly through the Mojave River channel. The primary sources of discharge are pumping wells and evapotranspiration.

California↗

Interaction of dams and landslides: Case studies and mitigation

In the first half of the 20th century, engineering geology and geotechnical engineering were in their infancy, and dams were often built where landslides provided valley constrictions, often without expert site investigation. Only the most important projects were subjected to careful geologic examination. Thus, dams were often built without complete understanding of the possible geotechnical problems occurring in foundations or abutments. Most of these dams still exist, although many have undergone costly repairs because of stability or leakage problems. Today, however, every effort is made in the selection of damsites, including those sited on landslides, to provide foundations and abutments that are generally impervious and capable of withstanding the stresses imposed by the proposed dam and reservoir, and possible landslides. By means of a literature search, technical interviews, and field inventory, I have located 254 large (at least 10 m high) dams worldwide that directly interact with landslides; that is, they have been built on pre-existing landslides or have been subjected to landslide activity during or after construction. A table (Appendix table A) summarizes dam characteristics, landslide conditions, and remedial measures at each of the dams. Of the 254 dams, 164 are earthfill, 23 are rockfill, and 18 are earthfill-rockfill; these are flexible dam types that generally perform better on the possibly unstable foundations provided by landslides than do more rigid concrete dams. Any pre-existing landslides that might impinge on the foundation or abutments of a dam should be carefully investigated. If a landslide is recognized in a dam foundation or abutment, the landslide deposits commonly are avoided in siting the dam or are removed during stripping of the dam foundation and abutment contacts. Contrarily, it has often been found to be technically feasible and economically desirable to site and construct dams on known landslides or on the remnants of these features. In these cases, proven preventive and remedial measures have been used to ensure the stability of the foundations and abutments, and to reduce seepage to acceptable levels.

Professional Paper↗

National Park Service Vegetation Mapping Inventory Program: Appalachian National Scenic Trail vegetation mapping project

The National Park Service (NPS) Vegetation Mapping Inventory (VMI) Program classifies, describes, and maps existing vegetation of national park units for the NPS Natural Resource Inventory and Monitoring (I&M) Program. The NPS VMI Program is managed by the NPS I&M Division and provides baseline vegetation information to the NPS Natural Resource I&M Program. The U.S. Geological Survey Upper Midwest Environmental Sciences Center, NatureServe, NPS Northeast Temperate Network, and NPS Appalachian National Scenic Trail (APPA) have completed vegetation classification and mapping of APPA for the NPS VMI Program. Mappers, ecologists, and botanists collaborated to affirm vegetation types within the U.S. National Vegetation Classification (USNVC) of APPA and to determine how best to map the vegetation types by using aerial imagery. Analyses of data from 1,618 vegetation plots were used to describe USNVC associations of APPA. Data from 289 verification sites were collected to test the field key to vegetation associations and the application of vegetation associations to a sample set of map polygons. Data from 269 validation sites were collected to assess vegetation mapping prior to submitting the vegetation map for accuracy assessment (AA). Data from 3,265 AA sites were collected, of which 3,204 were used to test accuracy of the vegetation map layer. The collective of these datasets affirmed 280 USNVC associations for the APPA vegetation mapping project. To map the vegetation and land cover of APPA, 169 map classes were developed. The 169 map classes consist of 150 that represent natural (including ruderal) vegetation types in the USNVC, 11 that represent cultural (agricultural and developed) vegetation types in the USNVC, 5 that represent natural landscapes with catastrophic disturbance or some other modification to natural vegetation preventing accurate classification in the USNVC, and 3 that represent nonvegetated water (non-USNVC). Features were interpreted from viewing 4-band digital aerial imagery using digital onscreen three-dimensional stereoscopic workflow systems in geographic information systems (GIS). (Digital aerial imagery was collected each fall during 2009–11 to capture leaf-phenology change of hardwood trees across the latitudinal range of APPA.) The interpreted data were digitally and spatially referenced, thus making the spatial-database layers usable in GIS. Polygon units were mapped to either a 0.5-hectare (ha) or 0.25-ha minimum mapping unit, depending on vegetation type or scenario; however, polygon units were mapped to 0.1 ha for alpine vegetation. A geodatabase containing various feature-class layers and tables provide locations and support data to USNVC vegetation types (vegetation map layer), vegetation plots, verification sites, validation sites, AA sites, project boundary extent and zones, and aerial image centers and flight lines. The feature-class layer and related tables of the vegetation map layer provide 30,395 polygons of detailed attribute data covering 110,919.7 ha, with an average polygon size of 3.6 ha; the vegetation map coincides closely with the administrative boundary for APPA. Summary reports generated from the vegetation map layer of the map classes representing USNVC natural (including ruderal) vegetation types apply to 28,242 polygons (92.9% of polygons) and cover 106,413.0 ha (95.9%) of the map extent for APPA. The map layer indicates APPA to be 92.4% forest and woodland (102,480.8 ha), 1.7% shrubland (1866.3 ha), and 1.8% herbaceous cover (2,065.9 ha). Map classes representing park-special vegetation (undefined in the USNVC) apply to 58 polygons (0.2% of polygons) and cover 404.3 ha (0.4%) of the map extent. Map classes representing USNVC cultural types apply to 1,777 polygons (5.8% of polygons) and cover 2,516.3 ha (2.3%) of the map extent. Map classes representing nonvegetated water (non-USNVC) apply to 332 polygons (1.1% of polygons) and cover 1,586.2 ha (1.4%) of the map extent.

Appalachian National Scenic Trail↗

A cost-benefit analysis of The National Map

The Geography Discipline of the U.S. Geological Survey (USGS) has conducted this cost-benefit analysis (CBA) of The National Map. This analysis is an evaluation of the proposed Geography Discipline initiative to provide the Nation with a mechanism to access current and consistent digital geospatial data. This CBA is a supporting document to accompany the Exhibit 300 Capital Asset Plan and Business Case of The National Map Reengineering Program. The framework for estimating the benefits is based on expected improvements in processing information to perform any of the possible applications of spatial data. This analysis does not attempt to determine the benefits and costs of performing geospatial-data applications. Rather, it estimates the change in the differences between those benefits and costs with The National Map and the current situation without it. The estimates of total costs and benefits of The National Map were based on the projected implementation time, development and maintenance costs, rates of data inclusion and integration, expected usage levels over time, and a benefits estimation model. The National Map provides data that are current, integrated, consistent, complete, and more accessible in order to decrease the cost of implementing spatial-data applications and (or) improve the outcome of those applications. The efficiency gains in per-application improvements are greater than the cost to develop and maintain The National Map, meaning that the program would bring a positive net benefit to the Nation. The average improvement in the net benefit of performing a spatial data application was multiplied by a simulated number of application implementations across the country. The numbers of users, existing applications, and rates of application implementation increase over time as The National Map is developed and accessed by spatial data users around the country. Results from the 'most likely' estimates of model parameters and data inputs indicate that, over its 30-year projected lifespan, The National Map will bring a net present value (NPV) of benefits of $2.05 billion in 2001 dollars. The average time until the initial investments (the break-even period) are recovered is 14 years. Table ES-1 shows a running total of NPV in each year of the simulation model. In year 14, The National Map first shows a positive NPV, and so the table is highlighted in gray after that point. Figure ES-1 is a graph of the total benefit and total cost curves of a single model run over time. The curves cross in year 14, when the project breaks even. A sensitivity analysis of the input variables illustrated that these results of the NPV of The National Map are quite robust. Figure ES-2 plots the mean NPV results from 60 different scenarios, each consisting of fifty 30-year runs. The error bars represent a two-standard-deviation range around each mean. The analysis that follows contains the details of the cost-benefit analysis, the framework for evaluating economic benefits, a computational simulation tool, and a sensitivity analysis of model variables and values.

Circular↗

Groundwater quality in the Antelope Valley, California

Groundwater provides more than 40 percent of California’s drinking water. To protect this vital resource, the State of California created the Groundwater Ambient Monitoring and Assessment (GAMA) Program. The Priority Basin Project of the GAMA Program provides a comprehensive assessment of the State’s groundwater quality and increases public access to groundwater-quality information. Antelope Valley is one of the study areas being evaluated. The Antelope study area is approximately 1,600 square miles (4,144 square kilometers) and includes the Antelope Valley groundwater basin (California Department of Water Resources, 2003). Antelope Valley has an arid climate and is part of the Mojave Desert. Average annual rainfall is about 6 inches (15 centimeters). The study area has internal drainage, with runoff from the surrounding mountains draining towards dry lakebeds in the lower parts of the valley. Land use in the study area is approximately 68 percent (%) natural (mostly shrubland and grassland), 24% agricultural, and 8% urban. The primary crops are pasture and hay. The largest urban areas are the cities of Palmdale and Lancaster (2010 populations of 152,000 and 156,000, respectively). Groundwater in this basin is used for public and domestic water supply and for irrigation. The main water-bearing units are gravel, sand, silt, and clay derived from surrounding mountains. The primary aquifers in Antelope Valley are defined as those parts of the aquifers corresponding to the perforated intervals of wells listed in the California Department of Public Health database. Public-supply wells in Antelope Valley are completed to depths between 360 and 700 feet (110 to 213 meters), consist of solid casing from the land surface to a depth of 180 to 350 feet (55 to 107 meters), and are screened or perforated below the solid casing. Recharge to the groundwater system is primarily runoff from the surrounding mountains, and by direct infiltration of irrigation and sewer and septic systems. The primary sources of discharge are pumping wells and evapotranspiration near the dry lakebeds.

California↗

Stratigraphic analysis of Corte Madera Creek flood control channel deposits

Sedimentation in a channel can reduce flood conveyance capability and potentially place nearby property and life at risk from flooding. In 1998, Marin County Public Works dredged the concrete-lined segment of Corte Madera Creek, which drains a hilly and largely urbanized watershed that terminates in San Francisco Bay, California. From then through 2015, approximately 4,100 cubic meters of sand and gravel infilled the concrete-lined segment. Determining when and under what conditions this material was deposited informs dredging operations for the Corte Madera Creek Flood Control Project and increases understanding of sediment delivery timing and mechanisms from this and other San Francisco Bay tributaries. Two hypothesized scenarios were investigated: (1) complete flushing during high flows and re-deposition of channel fill afterward and (2) more steady, gradual channel infilling. Stratigraphic analysis of eight sediment cores collected from the flood-control channel deposits in August 2017 was used to identify the most likely scenario. In addition, sediment elevation profiles, grain-size data, and a one-dimensional hydrodynamic model were used to assess the potential for longitudinal-channel scour and deposition following the wet winter of water year 2017 in the intertidal reach of the concrete channel in Corte Madera Creek. Results indicated the channel is undergoing gradual infilling. Storm flows of water year 2017 did not completely scour the concrete channel fill. Sediment cores, stratigraphic analysis, and sediment elevation profiles indicated 0.23 meter of scour at the downstream end of the concrete-lined section and that roughly 0.5 meter of channel fill remained in the channel. The hydrodynamic model demonstrated that sediment deposition in the concrete channel is expected to start downstream from the point where the channel bed reaches mean lower low-water level. High flows can carry most of the sediment through this segment of channel, depositing the bed-material load downstream from the transition to a wide channel, where velocity and bed shear stress decrease abruptly. Although the storm flows of 2017 did not completely scour the channel fill, subsequent material deposited in the channel could be transported downstream from the concrete channel if the sediment elevation profile is in equilibrium with present (2019) mean sea level. A calibrated, coupled hydrodynamic-sediment transport model could be used to test the present equilibrium between sediment elevation profiles and mean sea level, such that additional sediment build-up in the concrete channel is remobilized during subsequent wet-season flows and deposited downstream from the concrete-lined segment.

California↗

Mercury studies in the Florida Everglades

Public concern for wildlife and human health problems due to mercury (Hg) toxicity has increased substantially since the mid-1980's. These concerns are manifested primarily by the issuance of fish consumption advisories in the majority of U.S. states, Canada, and several European countries because of high levels of mercury in game fish. Although the precise causes for this contamination problem are not completely understood, it appears that there are both source and ecosystem-specific factors that can result in elevated levels of mercury in game fish. Because mercury is known to adverse affect the human brain and nervous system, health concerns arise when elevated concentrations of mercury are detected in game fish from ecosystems where there is subsistence level consumption of fish. In extreme cases such as the Everglades, where mercury concentrations in fish consistently exceed the Florida advisory level of 1.5 parts per million, even occasional fish consumption is not recommended. For most aquatic ecosystems, atmospheric deposition is the primary source of mercury. although there are numerous instances of geologic and anthropogenic point-source contamination. There are many sources of mercury to the atmosphere, both natural and human related. Natural sources include outgassing from the oceans, volcanoes, and natural mercury deposits. Coal combustion, waste incineration, chloralkai production, and metal processing are the dominant human-related sources to the atmosphere. In ecosystems for which atmospheric deposition is the dominant source, resulting concentrations of total mercury in water are very low, generally less than 10 nanograms per liter (ng/L). The challenge to scientists is to explain the series of processes that lead to toxic or near-toxic levels of mercury in organisms near the top of the food chain (bioaccumulation), when aqueous concentrations and source-delivery rates are so low. To understand this phenomenon adequately, scientists must apply an interdisciplinary approach wherein various components of an ecosystem (atmosphere, biota, surface water, ground water, and sediments) are studied-contemporaneously. The purpose of this fact sheet is to describe the mercury contamination problem in south Florida, and the interdisciplinary project that was assembled under the auspices of the U.S. Geological Survey South Florida Ecosystem Program to investigate the underlying processes that cause mercury bioaccumulation.

Florida↗

Establishing Forster’s Tern ( Sterna forsteri ) nesting sites at pond A16 using social attraction for the South Bay Salt Pond restoration project

Forster’s terns ( Sterna forsteri ), historically one of the most numerous colonial-breeding waterbirds in South San Francisco Bay, California, have experienced recent decreases in the number of nesting colonies and overall breeding population size. The South Bay Salt Pond Restoration Project aims to restore 50–90 percent of former salt evaporation ponds to tidal marsh habitat in South San Francisco Bay. During phase 1 of the South Bay Salt Pond Restoration Project, the breaching of several pond levees to begin the process of tidal marsh restoration inundated island nesting habitat that had been used by Forster’s terns, American avocets ( Recurvirostra americana ), and other waterbirds. Additional nesting habitat could be lost as more managed ponds are converted to tidal marsh in the future. To address this issue, the South Bay Salt Pond Restoration Project organized the construction of new nesting islands in managed ponds that will not be restored to tidal marsh, thereby providing enduring island nesting habitat for waterbirds. In 2012, 16 new islands were constructed in Pond A16 in the Alviso complex of the Don Edwards San Francisco Bay National Wildlife Refuge, which increased the number of islands in this pond from 4 to 20. However, despite a long history of nesting on the four islands in Pond A16 before the 2012 construction activities, no Forster’s terns have nested in Pond A16 during the 7-year period (2012–18) after island construction. During the 2017 and 2019 breeding seasons, we used social attraction measures (decoys and colony call playback systems) to attract Forster’s terns to islands within Pond A16 to re-establish nesting colonies. We maintained these systems from March through August in each year. To evaluate the effect of these social attraction measures, we completed surveys (between April and August) where we recorded the number and location of all Forster’s terns and other waterbirds using Pond A16, and we monitored waterbird nests. We compared bird survey and nest monitoring data collected in 2017 and 2019 to data collected in 2015 and 2016, prior to the implementation of social attraction measures, allowing for direct evaluation of the effect of social attraction efforts on Forster’s terns. To increase the visibility and stakeholder involvement of this project, we engaged in multiple outreach activities in 2017, 2019, and 2020, including the development of a project website and educational video; publication of popular articles in 2017 and 2020; the development of outreach materials describing the project to the general public; and public presentations to relay findings to managers, stakeholders, and the general public. The relative abundance of Forster’s terns in Pond A16, after adjusting for the overall South San Francisco Bay breeding population each year, was higher during the nesting period in 2017 and 2019 (when social attraction was used) than in 2015 and 2016 (before social attraction was used). Furthermore, more Forster’s terns were observed during the pre-nesting and nesting periods in the areas of Pond A16 where decoys and call systems were deployed. Although no Forster’s tern nests were observed in Pond A16 before social attraction was implemented (2015, 2016), or during the first-year social attraction was implemented (2017), 35 Forster’s tern nests were recorded during the second year of social attraction implementation in 2019. These 35 nests represent a re-establishment of a Forster’s tern nesting colony to Pond A16 for the first time in 8 years. As social attraction efforts often benefit from multiple years of decoy and call system deployment, results from 2017 and 2019 suggest that continued implementation of social attraction measures could help to ensure Forster’s tern breeding colonies persist in Pond A16 and other areas of South San Francisco Bay.

California↗

GLORIA sidescan and seismic data collected by the DESV STARELLA along the continental slope and upper continental rise of the Eastern United States in 1979

A cruise on the- DESV STARELLA was conducted between October 23. 1979, and November 8, 1979, by the U.S. Geologic.al Survey (USGS) in cooperation with the United Kingdom's Institute of Oceanographic Sciences (IOS). The purpose of the study was to gain an overview of the morphology of large areas of the Continental Slope and upper Continental Rise off the eastern ·united States. Sidescan-sonar and single-channel seismic-reflection data were collected along the tracklines. The ship's position. was monitored using LORAN_C and satellite navigation techniques. The sidescan data were collected using the !OS-developed Geologic Long­-Range Inclined Asdic, Mark II (GLORIA II) system. GLORIA was operated at either a 20-second or 40-second sweep, giving maximum slant-range distances of 15 or 30 kilometers, respectively, to each side of the towed fish. The sidescan data were collected on graphic recorders and analog tapes. The tapes were played onto photographic paper in a facsimile machine; then these prints were photographically stretched to produce approximately isometric images .. The images were not corrected for slant-range distortion. Mosaics at a scale of 1:250,000 (Mercator projection) were made from the photographic images. The seismic· data consist of 40-in 3 airgun and 10-kHz echo-sounder profiles. The airgun data were recorded on EPC recorders at both 8- and 4- second sweep rates. The 10-kHz echo-sounder data were recorded on a wet-paper recorder at a 2-second sweep rate. Approximately 4,820 km of seismic and sonar-data wera collected from four areas of interest and along the lines connecting those areas. Area 1 includes the Continental Slope and upper Rise seaward of Georges Bank, between Northeast Channel and Alvin Canyon. Numerous lines were run here, resulting in approximately 2,500 km of seismic data and complete and overlapping GLORIA coverage of the area. A similar survey, consisting of approximately 1 2 200 km of trackline, was run in area 2, which includes the Continental Slope and upper Rise seaward of the middle Atlantic states between Hudson Canyon and Baltimore Canyon. A single line, 250 km long, was run through area 3 along the base of the Continental Slope from Cape Hatteras to latitude 33°N. off North and South Carolina. Two parallel lines, totaling 870 km, were run through area 4 along the Blake Escarpment, from the Blake Spur south to latitude 27°40'N. One line was run along the top of the escarpment and the other was run along the base of the escarpment. All the data can be studied at the U.S. Geological Survey offices in Woods Hole, MA 02543. Microfilm copies of the sidescan-monitor record as well as the airgun and 10-kHz profiles can be purchased only from the National Geophysical Data Center, NOAA, Code E64, 325 Broadway, Boulder, CO 80303 (303/497-6338). Photographic copies of the GLORIA mosaics can also be obtained only from this address.

Open-File Report↗

Bedrock, soil, and lichen geochemistry from Isle Royale National Park, Michigan

Isle Royale National Park, Michigan, is a large island in northeastern Lake Superior that became a national park in 1940 and was designated as a wilderness area in 1976. The relative isolation of Isle Royale (Figure 1), 25 kilometers out in Lake Superior from the Canadian mainland, its generally harsh climate, and its status as a wilderness national park have minimized human influence on the geochemical evolution of its landscape. USGS sampling on Isle Royale began in 1996 as part of a larger project on the geology of the Midcontinent rift in the Lake Superior region and continued through 2000. Sampling began with collecting bedrock samples to characterize the geochemistry of the volcanic rocks that make up the much of the island, as well as samples representative of the minor native copper mineralization found on the island. Preliminary results from the bedrock study indicated, among other findings, that basaltic bedrock on the island had no detectable mercury, but that there was an association between native copper mineralization and trace amounts of mercury (Cannon and Woodruff, 1999). This finding and the recognition by the National Park Service that 6 of 32 inland lakes on Isle Royale have mercury levels in game fish that exceed State of Michigan acceptable levels for human consumption (Kallemeyn, 2000) resulted in renewed sampling on the island focused more on environmental issues. To evaluate atmospheric inputs of mercury and other elements to soil geochemistry, regionally distributed samples of both soils and lichens were collected as paired samples across the entire island. At each soil sample site, three epiphytic (grows in trees) lichen species, Evernia mesomorpha , Hypogymnia plysodes , and Parmelia sucata , were always collected. At some sites Cladina rangiferina , a lichen that grows on bare bedrock and soil surfaces, was also collected. The occurrence of Cladina rangiferina on the island is somewhat limited, and so this lichen species was not collected at all sites. A high density of soil samples was collected within three individual watersheds (Sargent Lake, Lake Wagejo, and Lake Richie) for a localized study that evaluated the terrestrial distribution of mercury and other elements of environmental concern. These lakes were chosen using data from Kallemeyn (2000) that showed that Sargent Lake and Lake Wagejo have high mercury in fish, whereas Lake Richie, which is similar in size to Sargent Lake, does not. As part of this study on the terrestrial contribution of mercury to lakes, long cores of lake sediments were recovered from Sargent Lake and Lake Richie using a modified Livingston piston sampler. For an ancillary study that evolved from the study on the distribution of mercury in certain watersheds, some soil samples were collected to evaluate the impact of forest fire on soil geochemistry, deliberately sampling within and outside areas on the island that burned in severe forest fires in 1936. To complete bedrock sampling on the island, rock samples from the Copper Harbor Formation, a sedimentary unit that occurs on the southeastern part of the island were collected in 1999. This report presents all the geochemical data from samples collected by the USGS during this period (Figures 1 and 2). A number of reports presenting data interpretation are in preparation

Michigan↗

Chemical constituents in groundwater from multiple zones in the eastern Snake River Plain aquifer, Idaho National Laboratory, Idaho, 2009-13

From 2009 to 2013, the U.S. Geological Survey’s (USGS) Idaho National Laboratory (INL) Project office, in cooperation with the U.S. Department of Energy, collected water-quality samples from multiple water-bearing zones in the eastern Snake River Plain aquifer. Water samples were collected from 11 monitoring wells completed in about 250–750 feet of the upper part of the aquifer, and samples were analyzed for selected major ions, trace elements, nutrients, radiochemical constituents, and stable isotopes. Each well was equipped with a multilevel monitoring system containing four to seven sampling ports that were each isolated by permanent packer systems. The sampling ports were installed in aquifer zones that were highly transmissive and that represented the water chemistry of the top three to five model layers of a steady-state and transient groundwater‑flow model. The groundwater-flow model and water chemistry are being used to better define movement of wastewater constituents in the aquifer. The water-chemistry composition of all sampled zones for the five new multilevel wells is calcium plus magnesium bicarbonate. One of the zones in well USGS 131A has a slightly different chemistry from the rest of the zones and wells and the difference is attributed to more wastewater influence from the Idaho Nuclear Technology and Engineering Center. One well, USGS 135, was not influenced by wastewater disposal and consisted of mostly older water in all of its zones. Tritium concentrations in relation to basaltic flow units indicate the presence of wastewater influence in multiple basalt flow groups; however, tritium is most abundant in the South Late Matuyama flow group in the southern boundary wells. The concentrations of wastewater constituents in deep zones in wells Middle 2051, USGS 132, USGS 105, and USGS 103 support the concept of groundwater flow deepening in the southwestern corner of the INL, as indicated by the INL groundwater-flow model.

Idaho↗

Artificial recharge through a well in fissured carbonate rock, west St. Paul, Minnesota

The Prairie du Chien Group was injected with 2,754,000 gallons (368,200 cubic feet), or 10,430 cubic metres, of municipally treated water at about 100 gallons per minute (13.4 cubic feet per minute), or 6.3 litres per second, for 20 days. The injection-pipe system was designed to utilize pipe friction rather than a remote-controlled valve in the well to maintain positive pressure and eliminate air entrainment in the injection water and the escape cf dissolved gasses from the water. During the 20-day injection period the temperature of the injection water declined gradually from 15.0 ° to 11.2 ° C, and the flow rate decreased from 108 to 90 gallons per minute (6.8 to 5.7 litres per second). Analyses of test data were, in some instances, based upon hydrologic judgement as well as observations. Results of aquifer tests before and after injections indicated that the transmissivity had decreased 18 percent during the intervening injection periods; however, the specific capacity remained the same, indicating no change in transmissivity during pumping. Analysis of water-level changes in observation wells during injection indicated a reduction in transmissivity of more than 50 percent; however, the specific capacity of the injection well decreased only about 5 percent during injection. A comparison of water-level changes with the discharge or recharge rates of the three tests showed that the water-level changes in the two observation wells tapping the Prairie du Chien Group during the injection test were greater than those projected from the two aouifer pumping tests. The deviations in the water-level changes and in the analysis of aquifer-test data indicate that the methods used to analyze data from these wells may not be wholly applicable, inasmuch as anisotropic and nonhomogeneous conditions prevail in at least the Prairie du Chien part of the aquifer. The native water and the injected water averaged 0.8 and 25 milligrams per litre chloride, respectively. The chloride, utilized as a tracer, showed that the injected water was detected only in the lower part of the nearest observation well, 99 feet (30.2 metres) from the injection well. The chemistry of the water and the rock formation showed little likelihood of plugging of the recharge well by chemical precipitation. Microbiological phenomena apparently did not become a significant factor in the recharge test. The hydraulic gradient of the aquifer in October and December 1971 (before and after injection) was estimated to be N. 36 ° E., 0.0013, and N. 39 ° E., 0.0012, respectively, on the basis of measurements of water levels in the three wells in the Prairie du Chien Group. The single-well tracer-dilution method of calculation showed a hydraulic gradient of 0.0016. A longitudinal dispersivity of 280 feet (85 metres) was calculated. Such a value of dispersivity is typical of fractured reservoirs and shows that the Prairie du Chien Group is a heterogeneous aquifer. The injection test demonstrated that it is hydrologically feasible to recharge the Prairie du Chien Group and the Jordan Sandstone artificially through wells completed in the Prairie du Chien Group. The fissures in the Prairie du Chien Group act as conduits through which water spreads. The water passes into the Jordan Sandstone from the Prairie du Chien over a larger area than it would if it were injected directly into the Jordan.

Minnesota↗

Native Prairie Adaptive Management: a multi region adaptive approach to invasive plant management on Fish and Wildlife Service owned native prairies

Much of the native prairie managed by the U.S. Fish and Wildlife Service (FWS) in the Prairie Pothole Region (PPR) of the northern Great Plains is extensively invaded by the introduced cool-season grasses, smooth brome ( Bromus inermis ) and Kentucky bluegrass ( Poa pratensis ). Management to suppress these invasive plants has had poor to inconsistent success. The central challenge to managers is selecting appropriate management actions in the face of biological and environmental uncertainties. In partnership with the FWS, the U.S. Geological Survey (USGS) developed an adaptive decision support framework to assist managers in selecting management actions under uncertainty and maximizing learning from management outcomes. This joint partnership is known as the Native Prairie Adaptive Management (NPAM) initiative. The NPAM decision framework is built around practical constraints faced by FWS refuge managers and includes identification of the management objective and strategies, analysis of uncertainty and construction of competing decision models, monitoring, and mechanisms for model feedback and decision selection. Nineteen FWS field stations, spanning four states of the PPR, have participated in the initiative. These FWS cooperators share a common management objective, available management strategies, and biological uncertainties. Though the scope is broad, the initiative interfaces with individual land managers who provide site-specific information and receive updated decision guidance that incorporates understanding gained from the collective experience of all cooperators. We describe the technical components of this approach, how the components integrate and inform each other, how data feedback from individual cooperators serves to reduce uncertainty across the whole region, and how a successful adaptive management project is coordinated and maintained on a large scale. During an initial scoping workshop, FWS cooperators developed a consensus management objective: increase the composition of native grasses and forbs on native sod while minimizing cost. Cooperators agreed that decision guidance should be provided annually and should account for local, real-time vegetation conditions observed on the ground. Over the course of development, two prototypes of the decision framework were considered. The final framework recognized four alternative actions that managers could take in any given year: (1) Graze—targeted use of grazing ungulates to achieve defoliation, (2) Burn—application of prescribed fire as the single form of defoliation, (3) Burn/Graze—a combination treatment, and (4) Rest—no action. The study area included northern mixed-grass and tallgrass prairie. Native vegetation in mixed–grass prairie has a strong cool-season component and thus the dominant native species have a phenology similar to that of smooth brome and Kentucky bluegrass, making management of those species challenging. In contrast, tallgrass prairie has a strong warm-season native component, leading to an existence of cool-season windows, periods of time in the fall and spring when cool‐season invasive grass species are actively growing and vulnerable to damage via select management actions, but warm‐season grass species are not active and are thus less susceptible to damage via the same actions. This dichotomy between prairie types necessitated the development of separate but parallel decision support systems for mixed-grass and tallgrass biomes. Management units are parcels of native prairie that receive a single management treatment at any one time over their entire extent. At any particular time, the vegetation state of each management unit is characterized by the amount of cover of native grasses and forbs and the type of invasive grass that is dominant. In addition, each unit has a defoliation state which reflects the number of years since the last defoliation event and an index to how intensively the unit was managed during the previous 7 years. State-transition models are used to predict the state of a management unit in year t+1 from its state in year t and a prescribed management action that was applied between the two monitoring events. Alternative models are built around key uncertainties that make choice of a management action difficult. Three uncertainties revolve around whether the effect of management actions depends on (1) type of dominant invader, (2) past defoliation history, and (3) level of invasion. Two additional uncertainties are considered when choosing a management action for tallgrass units: (4) the effectiveness of grazing within the cool-season window as a surrogate for burning when smooth brome is the dominant invader, and (5) the differential effect of active management outside the window as compared to rest. Because data on the probability of transitioning from one state to another under the various models were lacking, expert opinion and elicitation were used to parameterize the models. In addition, cooperators participated in elicitation exercises to extract their beliefs regarding the value of having native prairie compared to the cost of achieving it. Quantifying the subjective expression of utility in this way allowed for mathematical representation of the management objective into an objective function. By maximizing the objective function, cumulative utility is maximized, leading to the identification of a sequence of decisions that will achieve the management objective. The NPAM system adopted a vegetation monitoring protocol that was rapid, inexpensive, and familiar to many of the cooperators. The monitoring protocol served three purposes: (1) determining current vegetation and defoliation states of each unit, (2) evaluating progress toward the management objective, and (3) assessing predictive performance of the alternative models. The management year runs from September 1 to August 31. Management can be applied anytime during that period and monitoring takes places from late June to mid-August. Cooperators enter vegetation data and management information into a centralized database by August 25 of each year. Given the current state of the system (vegetation and defoliation states) and the current understanding of the system (or the belief state), identifying the current best management decision is a matter of looking up the combination (that is, system state and belief state) in the appropriate (mixed-grass or tallgrass) optimal decision table. Given complete uncertainty at the outset of decision-making, initial assignment of equal belief weights to each model was believed reasonable. The decisions in the optimal decision table that correspond to the current belief state constitute the current optimal decision policy. By August 31 of each year, individual cooperators are provided with a recommended management action for each of their management units for the upcoming management year. Upon receiving the management recommendations for their units, managers consider the recommendation, along with other relevant information, and at some point during the year one of the management alternatives is carried out. This iterative cycle of making and implementing a management decision, predicting the response, monitoring the outcome, comparing predicted and observed outcomes, updating model weights, and recommending a management action for the next cycle is expected to result in an accumulation of weight on a representative model of system dynamics, thereby increasing understanding needed to effectively manage native prairies. The NPAM system is now entering its second full year of complete operation, and represents one of only a few fully implemented applications of adaptive management within the U.S. Fish and Wildlife Service. NPAM is truly unique in that it originated from the ground up as a result of the leadership and steadfastness of several refuge biologists and managers confronted with a common problem. These biologists recognized that working together across a large landscape presented perhaps the best opportunity for halting and reversing the invasion of native grasslands by non-native cool-season grasses. Importantly, the NPAM system encapsulates the collective thinking and experience of tens if not hundreds of individuals who have battled this vexing problem for much of their careers. The NPAM initiative is rooted in principles of adaptive management, thereby affording the opportunity for grassland managers to pursue management objectives while acquiring information to reduce uncertainty and improve future management. The project introduced a number of technical innovations that will serve as templates for conservation efforts throughout and beyond the U.S. Fish and Wildlife Service. First, NPAM is an on-the-ground implementation of active adaptive management—possibly the first of its kind in conservation management—in which recommended management actions result from a prospective analysis of future learning (Williams, 1996). Second, by the use of dynamic optimization, NPAM demonstrates how decisions can be made that take into account possible future transitions of the system. Third, NPAM demonstrates how models of partial controllability are an effective means of accommodating unpredictable circumstances that cause a manager to follow a different course than was intended. Finally, the database developed for NPAM is an unparalleled system that enables the rapid integration of data from the field for the generation of ‘just-in-time’ management recommendations. In all, NPAM provides an example of how a science-management partnership can be forged to achieve large-scale conservation objectives.

Minnesota;Montana;North Dakota;South Dakota↗