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USGS2021

State of Lake Superior ecosystem in 2017

This report describes the status of fish species and their habitat in Lake Superior during the reporting period of 2012-2016 in response to achievement of fish community objectives (FCOs) established by fishery managers for the lake. The overarching goal for the FCOs continued to be met as the fish community remained diverse, self-regulating, dominated by indigenous species, and able to support sustainable fisheries, although further rehabilitation of certain fish is required. The Lake Superior Lakewide Action and Management Plan classified all habitat indicators for Lake Superior as good. Primary production and zooplankton abundance were stable during the reporting period and unchanged from the two previous reporting periods, indicating the lower food web is healthy. Abundance of the invertebrates Mysis diluviana and Diporeia spp. were stable during the reporting period, and Diporeia spp. density exceeded target levels defined in the Great Lakes Water Quality Agreement. Lake Whitefish (Coregonus clupeaformis) abundance was lower than during the previous reporting period but was within the FCO target. Abundance of lean, siscowet, and humper forms of Lake Trout (Salvelinus namaycush) remained stable at levels seen in previous reporting periods. The FCO for non-indigenous salmonids was met as Chinook Salmon (Oncorhynchus tshawytscha), Coho Salmon (O. kisutch), and steelhead/Rainbow Trout (O. mykiss) were being sustained by natural reproduction, and their abundance remained stable or increased from previous reporting periods. The FCO for Walleye (Sander vitreus) was not met, although populations showed signs of improvement since the previous reporting period. The fish community in littoral areas and embayments continued to be diverse and composed mostly of indigenous species. No new invasive species were found in Lake Superior during the reporting period. Degraded embayment and tributary habitats continued to prevent achievement of the FCOs for Brook Trout (S. fontinalis) and Lake Sturgeon (Acipenser fulvescens). Barriers created for hydroelectric generation either blocked Lake Sturgeon from historically important spawning grounds or reduced stream flows necessary for its reproduction. In tributaries without man-made barriers, Lake Sturgeon was relatively abundant and appeared healthy. Attainment of the FCOs for Brook Trout and Lake Sturgeon will be challenging and can only be attained through development of large-scale management actions like those implemented for Lake Trout rehabilitation and Sea Lamprey (Petromyzon marinus) control. Sea Lamprey-control expenditures doubled in 2016 from past levels and should result in suppression of the population closer to its FCO after 2016. The prey-fish FCO appears to have been met, but biomass of nearly all prey-fish species declined from that reported for the previous reporting period and has been on a downward trajectory since 2000. Predation by Lake Trout is probably to blame for the declining biomass of prey fish. Poor recruitment by Cisco (C. artedi) over the last 15 years is exacerbating the declines in prey-fish biomass because Lake Trout must compensate for the loss of Cisco by consuming other, less-abundant prey fish.

Lake Superior↗

USGS2002

Rapid loss of lampricide from catfish and rainbow trout following routine treatment

Rainbow trout (Oncorhynchus mykiss) and channel catfish (Ictalurus punctatus) were exposed to 3-trifluoromethyl-4-nitrophenol (TFM) and Bayluscide (niclosamide) during a sea lamprey control treatment of the Ford River, located in the upper peninsula of Michigan. Caged fish were exposed to a nominal concentration of 0.02 mg/L of niclosamide for a period of approximately 12 h. Samples of fillet tissue were collected from each fish species before treatment and at 6, 12, 18, 24, 48, 96, and 192 h following the arrival of the block of chemical at the exposure site. The fish were dissected, homogenized, extracted, and analyzed by high-performance liquid chromatography. The major residues found in the fillet tissues were TFM and niclosamide. Niclosamide concentrations were highest 12 h after arrival of the chemical block for rainbow trout (0.0395 ?? 0.0251 ??g/g) and 18 h after arrival of the chemical block for channel catfish (0.0465 ?? 0.0212 ??g/g). Residues decreased rapidly after the block of lampricide had passed and were below the detection limits in fillets of rainbow trout within 24 h and channel catfish within 96 h after the arrival of the lampricide.

Journal of Agricultural and Food Chemistry↗

USGS2023

Using mercury stable isotope fractionation to identify the contribution of historical mercury mining sources present in downstream water, sediment and fish

Ecosystems downstream of mercury (Hg) contaminated sites can be impacted by both localized releases as well as Hg deposited to the watershed from atmospheric transport. Identifying the source of Hg in water, sediment, and fish downstream of contaminated sites is important for determining the effectiveness of source-control remediation actions. This study uses measurements of Hg stable isotopes in soil, sediment, water, and fish to differentiate between Hg from an abandoned Hg mine from non-mine-related sources. The study site is located within the Willamette River watershed (Oregon, United States), which includes free-flowing river segments and a reservoir downstream of the mine. The concentrations of total-Hg (THg) in the reservoir fish were 4-fold higher than those further downstream (>90 km) from the mine site in free-flowing sections of the river. Mercury stable isotope fractionation analysis showed that the mine tailings (δ 202 Hg: −0.36‰ ± 0.03‰) had a distinctive isotopic composition compared to background soils (δ 202 Hg: −2.30‰ ± 0.25‰). Similar differences in isotopic composition were observed between stream water that flowed through the tailings (particulate bound δ 202 Hg: −0.58‰; dissolved: −0.91‰) versus a background stream (particle-bound δ 202 Hg: −2.36‰; dissolved: −2.09‰). Within the reservoir sediment, the Hg isotopic composition indicated that the proportion of the Hg related to mine-release increased with THg concentrations. However, in the fish samples the opposite trend was observed—the degree of mine-related Hg was lower in fish with the higher THg concentrations. While sediment concentrations clearly show the influence of the mine, the relationship in fish is more complicated due to differences in methylmercury (MeHg) formation and the foraging behavior of different fish species. The fish tissue δ 13 C and Δ 199 Hg values indicate that there is a higher influence of mine-sourced Hg in fish feeding in a more sediment-based food web and less so in planktonic and littoral-based food webs. Identifying the relative proportion of Hg from local contaminated site can help inform remediation decisions, especially when the relationship between total Hg concentrations and sources do not show similar covariation between abiotic and biotic media.

Oregon↗

USGS2016

The Mississippi River: A place for fish

The Mississippi River flows 3,734 km from its source at Lake Itasca, Minnesota to its outlet at the Gulf of Mexico. Along its course, it collects water from portions of two Canadian provinces and 41 % of the conterminous United States. Although greatly altered for navigation and flood control throughout much of its length, the Mississippi River remains an important fishery resource that provides habitat for 188 species of fishes and recreational and commercial fishing opportunities. The objectives of this chapter are to describe the contemporary fisheries habitat throughout the Mississippi River, identify how management to achieve human benefits influences the fishes and their habitats, and summarize efforts to conserve and enhance fish habitat. The 826-km headwater reach is entirely in Minnesota and remains largely unaltered. The reaches that extend 1,059 km from St. Anthony Falls, Minnesota to above the confluence with the Missouri River near St. Louis, Missouri have been altered by impoundment that has affected floodplain function, increased sedimentation of backwaters, and homogenized the formerly diverse aquatic habitats. After the confluence with the Missouri River, the Mississippi River flows freely for 1,849 km to the Gulf of Mexico. The alterations of the free-flowing reaches of greatest significance to the fisheries resource are reducing the duration and height of the flood pulse as a consequence of shortening the river channel, disconnection of the river from its historic and present floodplain, and loss of secondary channel-island complexes. Engineering features to improve commercial navigation have also added habitat and, when wisely manipulated, can be used to rehabilitate habitat. Some aspects of water quality have improved, but legacy chemicals and nutrient-laden inflows and sediments remain problems. Although true restoration in the sense of restoring all environmental conditions to an unaltered state is unlikely, the future value of the Mississippi River as a fisheries resource will depend on actively maintaining diverse and accessible aquatic habitats to support food webs and water quality suitable for fishes.

Book chapter↗

USGS2021

Method development for a short-term 7-day toxicity test with unionid mussels

The US Environmental Protection Agency's short-term freshwater effluent test methods include a fish ( Pimephales promelas ), a cladoceran ( Ceriodaphnia dubia ), and a green alga ( Raphidocelis subcapitata ). There is a recognized need for additional taxa to accompany the three standard species for effluent testing. An appropriate additional taxon is unionid mussels because mussels are widely distributed, live burrowed in sediment and filter particles from the water column for food, and exhibit high sensitivity to a variety of contaminants. Multiple studies were conducted to develop a relevant and robust short-term test method for mussels. We first evaluated the comparative sensitivity of two mussel species ( Villosa constricta and Lampsilis siliquoidea ) and two standard species ( P. promelas and C. dubia ) using two mock effluents prepared by mixing ammonia and five metals (cadmium, copper, nickel, lead, and zinc) or a field-collected effluent in 7-day exposures. Both mussel species were equally or more sensitive (more than two-fold) to effluents compared with the standard species. Next, we refined the mussel test method by first determining the best feeding rate of a commercial algal mixture for three age groups (1, 2, and 3 weeks old) of L. siliquoidea in a 7-day feeding experiment, and then used the derived optimal feeding rates to assess the sensitivity of the three ages of juveniles in a 7-day reference toxicant (sodium chloride [NaCl]) test. Juvenile mussels grew substantially (30%–52% length increase) when the 1- or 2-week-old mussels were fed 2 ml twice daily and the 3-week-old mussels were fed 3 ml twice daily. The 25% inhibition concentrations (IC25s) for NaCl were similar (314–520 mg Cl/L) among the three age groups, indicating that an age range of 1- to 3-week-old mussels can be used for a 7-day test. Finally, using the refined test method, we conducted an interlaboratory study among 13 laboratories to evaluate the performance of a 7-day NaCl test with L. siliquoidea . Eleven laboratories successfully completed the test, with more than 80% control survival and reliable growth data. The IC25s ranged from 296 to 1076 mg Cl/L, with a low (34%) coefficient of variation, indicating that the proposed method for L. siliquoidea has acceptable precision. Environ Toxicol Chem 2021;40:3392–3409. © 2021 SETAC

Environmental Toxicology and Chemistry↗

USGS2021

Geomorphic history of Lake Manix, Mojave Desert, California: Evolution of a complex terminal lake basin

California↗

USGS2002

Presence of organoarsenicals used in cotton production in agricultural water and soil of the Southern United States

Arsenicals have been used extensively in agriculture in the United States as insecticides and herbicides. Mono- and disodium methylarsonate and dimethylarsinic acid are organoarsenicals used to control weeds in cotton fields and as defoliation agents applied prior to cotton harvesting. Because the toxicity of most organoarsenicals is less than that of inorganic arsenic species, the introduction of these compounds into the environment might seem benign. However, biotic and abiotic degradation reactions can produce more problematic inorganic forms of arsenic, such as arsenite [As(III)] and arsenate [As(V)]. This study investigates the occurrences of these compounds in samples of soil and associated surface and groundwaters. Preliminary results show that surface water samples from cotton-producing areas have elevated concentrations of methylarsenic species (>10 ??g of As/L) compared to background areas (<1 ??g of As/L). Species transformations also occur between surface waters and adjacent soils and groundwaters, which also contain elevated arsenic. The data indicate that point sources of arsenic related to agriculture might be responsible for increased arsenic concentrations in local irrigation wells, although the elevated concentrations did not exceed the new (2002) arsenic maximum contaminant level of 10 ??g/L in any of the wells sampled thus far.

Journal of Agricultural and Food Chemistry↗

USGS2000

Determination of niclosamide residues in rainbow trout (Oncorhynchus mykiss) and channel catfish (Ictalurus punctatus) fillet tissue by high-performance liquid chromatography

Bayluscide [the ethanolamine salt of niclosamide (NIC)] is a registered piscicide used in combination with 3-(trifluoromethyl)-4-nitrophenol (TFM) to control sea lamprey populations in streams tributary to the Great Lakes. A high-performance liquid chromatography (HPLC) method was developed for the determination of NIC residues in muscle fillet tissues of fish exposed to NIC and TFM during sea lamprey control treatments. NIC was extracted from fortified channel catfish and rainbow trout fillet tissue with a series of acetone extractions and cleaned up on C 18 solid-phase extraction cartridges. NIC concentrations were determined by HPLC with detection at 360 and 335 nm for rainbow trout and catfish, respectively. Recovery of NIC from rainbow trout ( n = 7) fortified at 0.04 μg/g was 77 ± 6.5% and from channel catfish ( n = 7) fortified at 0.02 μg/g was 113 ± 11%. NIC detection limit was 0.0107 μg/g for rainbow trout and 0.0063 μg/g for catfish. Percent recovery of incurred radioactive residues by this method from catfish exposed to [ 14 C]NIC was 89.3 ± 4.1%. Percent recoveries of NIC from fortified storage stability tissue samples for rainbow trout ( n = 3) analyzed at 5 and 7.5 month periods were 78 ± 5.1 and 68 ± 2.4%, respectively. Percent recoveries of NIC from fortified storage stability tissue samples for channel catfish ( n = 3) analyzed at 5 and 7.5 month periods were 88 ± 13 and 76 ± 21%, respectively.

Great Lakes↗

USGS2003

A simple analytical procedure to replace HPLC for monitoring treatment concentrations of chloramine-T on fish culture facilities

Concentrations of chloramine-T must be monitored during experimental treatments of fish when studying the effectiveness of the drug for controlling bacterial gill disease. A surrogate analytical method for analysis of chloramine-T to replace the existing high-performance liquid chromatography (HPLC) method is described. A surrogate method was needed because the existing HPLC method is expensive, requires a specialist to use, and is not generally available at fish hatcheries. Criteria for selection of a replacement method included ease of use, analysis time, cost, safety, sensitivity, accuracy, and precision. The most promising approach was to use the determination of chlorine concentrations as an indicator of chloramine-T. Of the currently available methods for analysis of chlorine, the DPD ( N , N -diethyl- p -phenylenediamine) colorimetric method best fit the established criteria. The surrogate method was evaluated under a variety of water quality conditions. Regression analysis of all DPD colorimetric analyses with the HPLC values produced a linear model ( Y =0.9602 X +0.1259) with an r 2 value of 0.9960. The average accuracy (percent recovery) of the DPD method relative to the HPLC method for the combined set of water quality data was 101.5%. The surrogate method was also evaluated with chloramine-T solutions that contained various concentrations of fish feed or selected densities of rainbow trout. When samples were analyzed within 2 h, the results of the surrogate method were consistent with those of the HPLC method. When samples with high concentrations of organic material were allowed to age more than 2 h before being analyzed, the DPD method seemed to be susceptible to interference, possibly from the development of other chloramine compounds. However, even after aging samples 6 h, the accuracy of the surrogate DPD method relative to the HPLC method was within the range of 80–120%. Based on the data comparing the two methods, the U.S. Food and Drug Administration has concluded that the DPD colorimetric method is appropriate to use to measure chloramine-T in water during pivotal efficacy trials designed to support the approval of chloramine-T for use in fish culture.

Aquaculture↗

USGS1987

Synopsis of wetland functions and values: bottomland hardwoods with special emphasis on eastern Texas and Oklahoma

Bottomland hardwood wetlands are the natural cover type of many floodplain ecosystems in the southeastern United States. They are dynamic, productive systems that depend on intermittent flooding and moving water for maintenance of structure and function. Many of the diverse functions performed by bottomland hardwoods (e.g., flood control, sediment trapping, fish and wildlife habitat) are directly or indirectly valued by humans. Balanced decisions regarding bottomland hardwoods are often hindered by a limited ability to accurately specify the functions being performed by these systems and, furthermore, by an inability to evaluate these functions in economic terms. This report addresses these informational needs. It focuses on the bottomland hardwoods of eastern Texas and Oklahoma, serving as an introduction and entry to the literature. It is not intended to serve as a substitute for reference to the original literature. The first section of the report is a review of the major functions of bottomland hardwoods, grouped under the headings of hydrology, water quality, productivity, detritus, nutrients, and habitat. Although the hydrology of these areas is diverse and complex, especially with respect to groundwater, water storage at high flows can clearly function to attenuate peak flows, with possible reductions in downstream flooding damage. Water moving through a bottomland hardwood system carries with it various organic and inorganic constituents, including sediment, organic matter, nutrients, and pollutants. When waterborne materials are introduced to bottomland hardwoods (from river flooding or upland runoff), they may be retained, transformed, or transported. As a result, water quality may be significantly altered and improved. The fluctuating and flowing water regime of bottomland hardwoods is associated with generally high net primary productivity and rapid fluxes of organic matter and nutrients. These, in turn, support secondary productivity in the bottomland hardwoods and downstream through detrital export. A large number of studies detail the extensive utilization of bottomland hardwoods by animals. Several basic habitat components contribute to this support function, including: 1. Fluctuating water levels and permanent bodies of water, 2. Hard mast (e.g., acorns), 3. Dens and cavities, 4. High soil fertility, 5. Diversity of food and cover, 6. Predominance of woody plant communities, 7. Close proximity of diverse structural features, and 8. Linear features providing movement corridors. The second section of the report focuses on the bottomlands of eastern Texas and Oklahoma, including topics such as climate, soils, water resources, historical perspective, vegetation, and fauna. Considerable attention is given to structural characteristics in this section, in order to provide contrasts with bottomland hardwood ecosystems in other areas. In general, the bottomland hardwoods of eastern Texas and Oklahoma are very similar to those elsewhere in the southeastern United States. Differences include the occurrence and relative importance of some community types and plant species and the greater importance of reservoir construction as a source of bottomland hardwoods loss in eastern Texas and Oklahoma. Again, information on faunal utilization is extensive relative to the information available concerning other functions.

Oklahoma;Texas↗

USGS2003

Toxicity of lead-contaminated sediment to mute swans

Most ecotoxicological risk assessments of wildlife emphasize contaminant exposure through ingestion of food and water. However, the role of incidental ingestion of sediment-bound contaminants has not been adequately appreciated in these assessments. This study evaluates the toxicological consequences of contamination of sediments with metals from hard-rock mining and smelting activities. Lead-contaminated sediments collected from the Coeur d'Alene River Basin in Idaho were combined with either a commercial avian maintenance diet or ground rice and fed to captive mute swans ( Cygnus olor ) for 6 weeks. Experimental treatments consisted of maintenance or rice diets containing 0, 12 (no rice group), or 24% highly contaminated (3,950 μg/g lead) sediment or 24% reference (9.7 μg/g lead) sediment. Although none of the swans died, the group fed a rice diet containing 24% lead-contaminated sediment were the most severely affected, experiencing a 24% decrease in mean body weight, including three birds that became emaciated. All birds in this treatment group had nephrosis; abnormally dark, viscous bile; and significant (p ≤ 0.05) reductions in hematocrit and hemoglobin concentrations compared to their pretreatment levels. This group also had the greatest mean concentrations of lead in blood (3.2 μg/g), brain (2.2 μg/g), and liver (8.5 μg/g). These birds had significant (α = 0.05) increases in mean plasma alanine aminotransferase activity, cholesterol, and uric acid concentrations and decreased plasma triglyceride concentrations compared to all other treatment groups. After 14 days of exposure, mean protoporphyrin concentrations increased substantially, and mean δ-aminolevulinic acid dehydratase activity decreased by more than 95% in all groups fed diets containing highly contaminated sediments. All swans fed diets that contained 24% lead-contaminated sediment had renal acid-fast intranuclear inclusion bodies, which are diagnostic of lead poisoning in waterfowl. Body weight and hematocrit and hemoglobin concentrations in swans on control (no sediment) and reference (uncontaminated) sediment diets remained unchanged. These data provide evidence that mute swans consuming environmentally relevant concentrations of Coeur d'Alene River Basin sediment developed severe sublethal lead poisoning. Furthermore, toxic effects were more pronounced when the birds were fed lead-contaminated sediment combined with rice, which closely resembles the diet of swans in the wild.

Archives of Environmental Contamination and Toxico↗

USGS2020

Accidental chlorophacinone exposure of lactating ewes: Clinical follow-up and human health dietary implications

Anticoagulant rodenticides are widely used for rodent control in agricultural and urban settings. Their intense use can sometimes result in accidental exposure and even poisoning of livestock. Can milk, eggs or meat derived from such accidentally exposed animals be consumed by humans? Data on the pharmacokinetics of chlorophacinone in milk of accidentally exposed ewes were used to estimate the risk associated with its consumption. Three days after accidental ingestion, chlorophacinone was detected in plasma of 18 ewes, with concentrations exceeding 100 ng/mL in 11 animals. Chlorophacinone was detected in milk on day 2 post-exposure and remained quantifiable for at least 7 days in milk of these 11 ewes. Concentrations in milk were much lower than in plasma and decreased quickly (mean half-life of 2 days). This study demonstrated dose-dependent mammary transfer of ingested chlorophacinone. Variation in prothrombin time (PT) on Day 3 suggested that some of the ewes that ingested chlorophacinone may have been adversely affected, but PT did not facilitate estimation of the quantity of chlorophacinone consumed. Using safety factors described in the literature, consumption of dairy products derived from these ewes after a one-week withdrawal period would pose low risk to consumers.

Creuse↗

USGS2018

Habitat selection, movement patterns, and hazards encountered by northern leopard frogs (Lithobates pipiens) in an agricultural landscape

Telemetry data for 59 Northern Leopard Frogs (Lithobates pipiens) breeding in ponds in Houston and Winona Counties, MN; 2001-2002. Agricultural intensification is causing declines in many wildlife species, including Northern Leopard Frogs (Lithobates pipiens). Specific information about frog movements, habitat selection, and sources of mortality can be used to inform conservation-focused land management and acquisition. We studied Northern Leopard Frogs in southeastern Minnesota, part of the Driftless Area ecoregion, characterized by hills and valleys and a mix of agriculture, forests, small towns and farmsteads. In this area, small farm ponds, originally built to control soil erosion are used by the species for breeding and wintering in addition to riparian wetlands. But, this agricultural landscape may be hazardous for frogs moving between breeding, feeding, and wintering habitats. We surgically implanted transmitters into the peritoneal cavity of 59 Northern Leopard Frogs and tracked them from May to October 2001-2002. The total distance traveled by radio-tagged frogs ranged from 12 to 3316 m, the 95% home range averaged 5.3 ± 1.2 (SE) ha, and the 50% core area averaged 1.05 ± 0.3 (SE) ha. As expected, Northern Leopard Frogs selected wetlands over all other land cover classes and row crops were generally avoided at all levels of selection. Only a few tracked frogs were successful at dispersing (n = 6). Most frogs attempting to disperse (n =31) ended up missing (n = 14), died due to mowing (n = 8), or were recorded as transmitter failure (n = 2) or unknown mortalities (n = 1). For the conservation of Northern Leopard Frogs in this agricultural setting, we must consider both the aquatic and the terrestrial needs of this species. Conservation agencies that restore, manage, and acquire wetlands should consider the hazards posed by land uses adjacent to frog breeding and wintering sites and plan for movement corridors between these locations. For example, grasslands that are mowed or hayed between April and October in the north central U.S. and are adjacent to wetlands, pose a direct threat to frogs because these cultivated grasslands are primary locations for summer occupancy. When conservation land managers are selecting sites for acquisition or restoration they should avoid investments that will situate the wetland adjacent to heavily travelled roads and agricultural lands likely to be mowed or hayed. Increasing habitat amount and quality at amphibian breeding, feeding and wintering sites should reduce the energy required and hazards associated with moving long distances. Large, diverse wetlands probably provide all of the requirements needed by Northern Leopard Frogs for survival including food, shelter, breeding and overwintering areas.

Minnesota↗

USGS2012

Lineament analysis of mineral areas of interest in Afghanistan

During a preliminary mineral resource assessment of Afghanistan (Peters and others, 2007), 24 mineralized areas of interest (AOIs) were highlighted as the focus for future economic development throughout various parts of the country. In addition to located mineral resources of value, development of a viable mining industry in Afghanistan will require the location of suitable groundwater resources for drinking, processing of mineral ores for use or for export, and for agriculture and food production in areas surrounding and supporting future mining enterprises. This report and accompanying GIS datasets describe the results of both automated and manual mapping of lineaments throughout the 24 mineral occurrence AOIs described in detail by Peters and others (2007; 2011). For this study, we define lineaments as "mappable linear or curvilinear features of a surface whose parts align in a straight or slightly curving relationship that may be the expression of a fault or other linear zones of weakness" as derived from remote sensing sources such as optical imagery, radar imagery or digital elevation models (DEMs) (Sabins, 2007). Water wells in bedrock aquifers are generally more productive where boreholes intersect fractures or fracture zones. Lineament identification and analysis have long been used as a reconnaissance tool to identify such favorable conditions for groundwater resources in carbonate bedrock environments (Lattman and Parizek, 1964; Siddiqui and Parizek, 1971). More recently, lineament analysis has been used to identify areas of greater well yields in other bedrock settings, such as crystalline bedrock (Mabee and other, 1994; Moore and others, 2002). Lineaments provide an indication of bedrock areas that warrant further investigation for optimal water well placement. They may also indicate areas of preferential flow and storage of groundwater, and, thus, areas with a greater density of lineaments may indicate greater secondary porosity. Lineaments may indicate structurally trending mineralized areas (for example, Mars and Rowan, 2007), or locations of near-surface water resources, especially when surface vegetation growth coincides with lineaments. The purpose of this report and accompanying GIS data is to provide lineament maps that give one indication of areas that warrant further investigation for optimal bedrock water-well placement within 24 target areas for mineral resources (Peters and others, 2011). These data may also support the identification of faults related to modern seismic hazards (for example, Wheeler and others, 2005; Ruleman and others, 2007), as well as support studies attempting to understand the relationship between tectonic and structural controls on hydrothermal fluid flow, subsequent mineralization, and water-quality issues near mined and unmined mineral deposits (for example, Eppinger and others, 2007).

Open-File Report↗

USGS2022

Seasonal and long-term clarity trend assessment of Lake Tahoe, California–Nevada

The clarity of Lake Tahoe, observed using a Secchi disk on a regular basis since the late 1960s, continues to be a sentinel metric of lake health. Water clarity is influenced by physical and biological processes and has declined in the five decades of monitoring, revealing differences between summer (June–September) and winter (December–March). This document summarizes key findings of a study of Lake Tahoe water clarity, including long-term variability and the relative importance of several influencing variables and processes. This study, prepared in cooperation with the Nevada Division of Environmental Protection, focused on (1) an apparent divergence in clarity trends between summer and winter periods, (2) observed changes in in-lake physical and ecological variables that may influence or control seasonal and annual clarity trends, and (3) five research hypotheses regarding lake clarity that were developed by Lake Tahoe management agencies. Previously collected data were used to complete this study. Trend analysis confirmed that winter clarity stabilized (that is, there is no longer a statistically significant trend up or down) during the last 20 years. Evaluation of clarity for selected months in the 50-year Secchi disk clarity dataset showed that only two summer months, July and August, had statistically significant decreases in clarity from 2000–19. Different subsets of available data were analyzed to reveal the presence or absences of trends for each season, decade, and month. Five hypotheses related to lake clarity were part of the study described by this report. Hypothesis 1 stated that clarity is controlled predominantly by the distribution and volumetric density of fine particles in suspension. This hypothesis was studied using available data describing in-lake fine (0–20 micrometers) particles from 2008–19. Water clarity was negatively correlated with in-lake particle abundance, with particles in the 1.0-4.6 μm range having the greatest effect, consistent with light-scattering theory. Estimated abundances of diatoms of the genus Cyclotella also were found to be negatively correlated with clarity. Data limitations precluded a complete investigation of hypothesis 2, which stated that the observed improvements in winter water clarity are a response to decreasing fine suspended-sediment concentrations in the lake resulting from load reductions from upland sources in and near urbanized areas. Data describing fine-sediment loading from urban areas to the lake were only available since 2014, and only once or twice per month. A slight, statistically significant, negative correlation was identified between urban fine-particle loading and monthly lake clarity with a 4-month lag. Particle abundance in monitored streams is highly correlated with simultaneous particle abundance in the lake. Hypothesis 3 stated that changing hydrodynamic conditions in the lake are increasing thermal stability and resistance to mixing. Trend analyses performed on stability index and buoyancy frequency time series computed from long-term observations of lake temperatures support the hypothesis that hydrodynamic conditions have evolved since 1969 to increase the lake’s resistance to mixing. The date of maximum mixing in winter has become progressively earlier in the year. Lake density stratification, defined using the stability index, is commencing earlier in the year and extending a month longer than in the early years of the monitoring program. Hypothesis 4 stated that the trend of decreasing summer clarity is a result of earlier, prolonged, and more intense stratification. Statistically significant correlations were found between summer clarity and (1) date of onset of stratification, (2) duration of stratification, and (3) buoyancy frequency. Hypothesis 5 stated that ecological (food web) interactions are causing changes in the trends of seasonal or annual clarity; data supporting hypothesis 5 were limited to examples from other systems and to intermittent monitoring of Lake Tahoe and Emerald Bay. The resulting narrative assessment was motivated by a 6-year study of Mysis shrimp disappearance and return in Emerald Bay. The available data and a large body of published literature are consistent with the inference that Mysis shrimp-induced food web changes are causing changes in the trends of seasonal or annual clarity. This food-web study focused on the relations between introduced Mysis shrimp, the native cladocerans ( Daphnia and Bosmina ) that were largely eliminated following Mysis introduction, and the effect on fine particles within the lake. The records of Mysis and other zooplankton data for Lake Tahoe are episodic and have large gaps. Consequently, statistical analyses could not be conducted to compare zooplankton data with other variables. The long-term record, however, indicates that the key effect was a change to the phytoplankton assemblage, where larger diatoms disappeared, likely due to Mysis grazing, only to be replaced by Cyclotella that are an order-of-magnitude smaller and have increased the abundance and volumetric density of total fine particles in suspension (biotic and abiotic).

California↗

USGS1940

Ground-water resources of Kansas

Introduction: Water is a necessity of life. Accordingly, every person is deeply interested in the subject of water supply. He knows that he must have water to drink. He depends indirectly on water for all his food and clothing. He may want water in which to wash. Civilized man has learned also that water serves admirably for a large and ever enlarging list of uses that depend on its easy convertibility from a liquid to a solid or gaseous state and its adaptability as a chemical solvent, a medium for transfer of matter or energy, and a regulator of temperature. The average consumption of water in towns and cities of the United States amounts to about 100 gallons per person per day. Because of long familiarity with never-failing supplies of water provided by nature, or equally, because of unthinking dependence on others, many individuals are probably unaware of their interest in water, but let water become difficult or impossible to obtain, or let the quality of water be greatly changed, and there is immediate concern. Many Kansas persons — without doubt too many — give little thought to the subject of water when rainfall is normal and when ponds and streams are full, but not too full. Kansas has a smaller natural water supply than many other regions, but we are used to these conditions, and it is strongly marked departures from what we regard as normal that cause anxiety. Periods of excessive heat and drought such as have recurred in Kansas, especially during the last half-dozen years, bring hardships to very many persons, particularly dwellers on the farm. Alarm is felt when field crops and pasture shrivel from lack of moisture and from heat, when there is insufficient water for the stock, when wells go dry, and when even some towns and cities must haul water in tank cars. Everyone is then water-conscious, as is true also under reverse conditions, when overabundance of rainfall produces disastrous floods. It is obvious, however, that the subject of water supply should not be given attention only in times of deficiency or overabundance. All citizens of Kansas should have enduring interest in quests of water control and conservation that will make for equable supply. No individual or government agency can increase or diminish the annual rainfall, nor safeguard wholly against floods. It is possible, on the other hand, largely to avoid the distress due to severe shortage of water in recent years. This statement calls attention to the subject of water in the ground, or as commonly known, ground water. I have been asked to discuss the underground water resources of Kansas. I am asked to give answers to such questions as: In what places and under what conditions may water that is suitable for domestic and stock use be obtained from wells? Why are some water wells in Kansas never-failing large producers of excellent waters, whereas other yield only small amounts of poor water and readily go dry? What improvements are possible in methods of finding and utilizing the ground-water resources that exist in Kansas? What provisions can be made to safeguard best against effects of prolonged drought? These questions call for a discussion of some general principles that apply to accumulation and movement of water beneath the surface of in Kansas, and especially to the various geologic conditions that are fundamental factors in controlling variation in water supply from the below ground. It will be desirable also to consider the characteristics of various districts in Kansas that may be differentiated as natural ground-water provinces, pointing out the distinguishing features of these districts. The basis for these distinctions is a difference in water-supply conditions that depends mainly on variation in underground rock structure. Importance of ground-water resources. — The importance of Kansas' ground-water resources may be emphasized from various viewpoints and in different ways. More than three-fourths of the public water supplies of Kansas are obtained from wells. In 1939, only 60 out of 375 municipal water supplies in Kansas, which is 16 percent, utilized surface waters. If the water wells of the cities and those located on all privately owned land in the state were suddenly destroyed, making it necessary to go to streams, springs, lakes (which are almost all artificial), and ponds for water supply domestic, stock, and industrial use, there would be almost incalculable difficulty and expense. If one could not go to springs, or dig new wells, or use any surface water derived from underground flow, much of Kansas would become uninhabitable. These suggested conditions seem absurd, but they emphasize our dependence on ground-water resources. Fromm a quantitative standpoint, ground-water supplies existent in Kansas far outweigh surface waters that are present in the state at any one time. No exact figures for such comparison can be given, but, taking 384 square miles as the total surface water area of the state and estimating an average water depth of five feet, the computed volume of surface waters is found to be 1/100th of that of the conservatively estimated ground-water storage in Kansas. The latter takes account only of potable fresh water and is based on an assumed mean thickness of ten feet of reservoir having an effective porosity of twenty percent. It is to be remembered, however, that most of the surface water is run-off, which soon leaves the state, stream valleys being replenished from rainfall and flow from ground-water reservoirs. Most of the ground-water supplies, on the other hand, have existed for many years with almost no appreciable movement--in fact, it is reasonably certain that some well water drawn from beneath the surface of Kansas in 1940 represents rainfall in this region at time before the first white man entered Kansas, even before the visit of Coronado in the 16th century. Most ground water is to be regarded as water in storage rather than water in transit.

Kansas↗

USGS2003

Kelp forest ecosystems: Biodiversity, stability, resilience and future

Kelp forests are phyletically diverse, structurally complex and highly productive components of coldwater rocky marine coastlines. This paper reviews the conditions in which kelp forests develop globally and where, why and at what rate they become deforested. The ecology and long archaeological history of kelp forests are examined through case studies from southern California, the Aleutian Islands and the western North Atlantic, well-studied locations that represent the widest possible range in kelp forest biodiversity. Global distribution of kelp forests is physiologically constrained by light at high latitudes and by nutrients, warm temperatures and other macrophytes at low latitudes. Within mid-latitude belts (roughly 40–60° latitude in both hemispheres) well-developed kelp forests are most threatened by herbivory, usually from sea urchins. Overfishing and extirpation of highly valued vertebrate apex predators often triggered herbivore population increases, leading to widespread kelp deforestation. Such deforestations have the most profound and lasting impacts on species-depauperate systems, such as those in Alaska and the western North Atlantic. Globally urchin-induced deforestation has been increasing over the past 2–3 decades. Continued fishing down of coastal food webs has resulted in shifting harvesting targets from apex predators to their invertebrate prey, including kelp-grazing herbivores. The recent global expansion of sea urchin harvesting has led to the widespread extirpation of this herbivore, and kelp forests have returned in some locations but, for the first time, these forests are devoid of vertebrate apex predators. In the western North Atlantic, large predatory crabs have recently filled this void and they have become the new apex predator in this system. Similar shifts from fish- to crab-dominance may have occurred in coastal zones of the United Kingdom and Japan, where large predatory finfish were extirpated long ago. Three North American case studies of kelp forests were examined to determine their long history with humans and project the status of future kelp forests to the year 2025. Fishing impacts on kelp forest systems have been both profound and much longer in duration than previously thought. Archaeological data suggest that coastal peoples exploited kelp forest organisms for thousands of years, occasionally resulting in localized losses of apex predators, outbreaks of sea urchin populations and probably small-scale deforestation. Over the past two centuries, commercial exploitation for export led to the extirpation of sea urchin predators, such as the sea otter in the North Pacific and predatory fishes like the cod in the North Atlantic. The large-scale removal of predators for export markets increased sea urchin abundances and promoted the decline of kelp forests over vast areas. Despite southern California having one of the longest known associations with coastal kelp forests, widespread deforestation is rare. It is possible that functional redundancies among predators and herbivores make this most diverse system most stable. Such biodiverse kelp forests may also resist invasion from non-native species. In the species-depauperate western North Atlantic, introduced algal competitors carpet the benthos and threaten future kelp dominance. There, other non-native herbivores and predators have become established and dominant components of this system. Climate changes have had measurable impacts on kelp forest ecosystems and efforts to control the emission of greenhouse gasses should be a global priority. However, overfishing appears to be the greatest manageable threat to kelp forest ecosystems over the 2025 time horizon. Management should focus on minimizing fishing impacts and restoring populations of functionally important species in these systems.

Environmental Conservation↗

USGS2014

Metals, organic compounds, and nutrients in Long Island Sound: sources, magnitudes, trends, and impacts

Long Island Sound (LIS) is a relatively shallow estuary with a mean depth of 20 m (maximum depth 49 m) and a unique hydrology and history of pollutant loading. Those factors have contributed to a wide variety of contamination problems in its muddy sediments, aquatic life and water column. The LIS sediments are contaminated with a host of legacy and more recently released toxic compounds and elements related to past and present wastewater discharges and runoff. These include non-point and storm water runoff and groundwater discharges, whose character has changed over the years along with the evolution of its watershed and industrial history. Major impacts have resulted from the copious amounts of nutrients discharged into LIS through atmospheric deposition (N), domestic and industrial waste water flows, fertilizer releases, and urban runoff. All these sources and their effects are in essence the result of human presence and activities in the watershed, and the severity of pollutant loading and their impacts generally scales with total population in the watersheds surrounding LIS. Environmental legislation passed since the mid-to late 1900s (e.g., Clean Air Act, Clean Water Act) has had a beneficial effect, however, and contaminant loadings for many toxic organic and inorganic chemicals and nutrients have diminished over the last few decades (O’Shea and Brosnan 2000; Trench, et al, 2012; O’Connor and Lauenstein 2006; USEPA 2007). Major strides have been made in reducing the inflow of nutrients into LIS, but cultural eutrophication is still an ongoing problem and nutrient control efforts will need to continue. Nonetheless, LIS is still a heavily human impacted estuary (an ‘Urban Estuary’, as described for San Francisco Bay by Conomos, 1979), and severe changes in water quality and sediment toxicity as well as ecosystem shifts have been witnessed over the relatively short period since European colonization in the early 1600s (Koppelman et al., 1976). The main rivers that discharge into LIS are the East River in the west, the Housatonic and Connecticut rivers on the north, and the Thames River at the northeastern end of LIS, with the Quinnipiac and several other smaller rivers also coming in from Connecticut. The East River is a tidal strait that connects LIS with New York Harbor through the heart of the New York City metropolitan region. The Housatonic, Quinnipiac, Connecticut and Thames river basins drain agricultural, urban and industrial lands in a watershed that extends from Connecticut north to Canada. The Sound receives contaminants from many sources within and outside its contributing watershed, including direct discharges from coastal industries, wastewater treatment plants (WWTP), urban runoff, and atmospheric deposition. New England has a long history of industrial activity, with factories that once crowded its riverbanks and shores now having succumbed to economic forces that drove manufacturing overseas. Relict deposits with legacy pollutants in upland sediments persist and combine with modern runoff sources from an increasingly densely populated watershed, and continue to be a source of contaminants for LIS. While toxic exposure from legacy and active sources has diminished over the years as wastewater treatment has improved and industries closed or moved away, pockets of contamination still have consequences for many embayments and coves, particularly near urbanized areas of western LIS. Loading of nutrients and carbon have been of recent concern in LIS because of the extensive impacts observed since the mid-1980s. Excess nutrients not only create inhospitable conditions for higher forms of aquatic life through reduced oxygen levels and disrupting trophic dynamics, but also by altering the local biogeochemistry. As a result, the release of toxic substances into the water column may be enhanced in hypoxic waters, thus exerting a toxic effect or enhancing incorporation of toxic pollutants into the food we

Book chapter↗