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At least 559 records · Page 31Linked to original sources
USGS2022

Eastern Ecological Science Center — Fish and aquatic animal health

Science provided by the U.S. Geological Survey (USGS) Eastern Ecological Science Center (EESC) helps to protect fish and aquatic animal health and support disease management of our Nation’s fisheries and aquatic animal populations. Our capabilities and expertise span diverse, yet highly integrated disciplines related to all aspects of biology, ecology, and animal health. Our scientists work to identify novel and emerging pathogens and diseases to assess fish and aquatic animal responses to parasites, pathogens, adverse environmental conditions, and chemical exposures. Eastern Ecological Science Center research is conducted both in laboratories and in the field in various aquatic environments ranging from headwater streams to the ocean. The EESC team provides science leadership and support for fisheries and aquatic species specialists nationwide.

Fact Sheet↗
USGS2009

Evaluating the power to detect temporal trends in fishery independent surveys: A case study based on Gillnets Set in the Ohio waters of Lake Erie for walleye

Fishery-independent (FI) surveys provide critical information used for the sustainable management and conservation of fish populations. Because fisheries management often requires the effects of management actions to be evaluated and detected within a relatively short time frame, it is important that research be directed toward FI survey evaluation, especially with respect to the ability to detect temporal trends. Using annual FI gill-net survey data for Lake Erie walleyes Sander vitreus collected from 1978 to 2006 as a case study, our goals were to (1) highlight the usefulness of hierarchical models for estimating spatial and temporal sources of variation in catch per effort (CPE); (2) demonstrate how the resulting variance estimates can be used to examine the statistical power to detect temporal trends in CPE in relation to sample size, duration of sampling, and decisions regarding what data are most appropriate for analysis; and (3) discuss recommendations for evaluating FI surveys and analyzing the resulting data to support fisheries management. This case study illustrated that the statistical power to detect temporal trends was low over relatively short sampling periods (e.g., 5–10 years) unless the annual decline in CPE reached 10–20%. For example, if 50 sites were sampled each year, a 10% annual decline in CPE would not be detected with more than 0.80 power until 15 years of sampling, and a 5% annual decline would not be detected with more than 0.8 power for approximately 22 years. Because the evaluation of FI surveys is essential for ensuring that trends in fish populations can be detected over management-relevant time periods, we suggest using a meta-analysis–type approach across systems to quantify sources of spatial and temporal variation. This approach can be used to evaluate and identify sampling designs that increase the ability of managers to make inferences about trends in fish stocks.

Ohio↗
USGS2024

Computational approaches improve evidence synthesis and inform broad fisheries trends

Addressing ecological impacts with effective conservation actions requires information on the links between human pressures and localized responses. Understanding links is a priority for many conservation contexts, including the world's fresh waters, which face intensifying threats to disproportionately high species diversity, including more than half of the world's fish species. Literature synthesis can uncover links and highlight potential research gaps, yet can be very cumbersome and time consuming. Emerging tools like text mining can improve efficiency in extracting relevant information from vast scientific outputs. This study synthesizes evidence of direct anthropogenic threats to major inland fisheries and examines driver-impact-response patterns using coupled automated and manual text classification methods. We screened 9336 abstracts from 45 river basins of high importance to inland fish production; 1152 abstracts contained evidence of direct threats to fish. The most common documented drivers were pollution, dams, and fishing pressure, which were most strongly linked to decreased fitness, altered reproduction, and mortality, respectively. Strong impact-response links to pollution signal potential bias toward documenting acute threats that generate more visible and immediate impacts. The use of machine learning-based text classification performed best in classifying extraneous information. Results can inform the development of inland fisheries indicators and threat-based metrics, highlight possible evidence gaps in linking global drivers to fishery-level responses, and illustrate the application of a coupled synthesis approach for improved efficiency and extraction of information relevant to conservation outcomes. The associated user and interpretation guides address accessibility and technical barriers faced by conservation scientists to improve efficiency in evidence synthesis.

Conservation Science and Practice↗
USGS2019

The future of barriers and trapping methods in the sea lamprey (Petromyzon marinus) control program in the Laurentian Great Lakes

A major duty of the Great Lakes Fishery Commission (GLFC), created in 1955, was the development a program of eradication or management of sea lamprey populations in the Great Lakes for the protection of the Great Lakes fishery. Beginning in the 1980s the GLFC shifted sea lamprey control to an integrated pest management model seeking to deploy control measures which target multiple life stages. Currently control efforts focus on limiting the area of infestation using barriers to migratory adults and eradication of larvae from streams using selective pesticides. Feedback on program effectiveness is obtained by trapping migratory adult lamprey at a series of index sites around the basin. The GLFC continues to support multiple research initiatives to develop additional control, improve current control measures, and further advance the sea lamprey control program. During the past six decades sea lamprey control in the Great Lakes has evolved as the research program has identified technological advances. Here we summarize the current state and recent advancements for two of the sea lamprey control program’s core elements, barriers and traps, highlight challenges to be addressed to continue the advancement of these program elements, and provide a series of research questions to spur interest within the research community. Further, because considerable information about these program elements is scattered among grey literature and technical reports, we summarize the history of barriers and traps in sea lamprey control in the included appendices to provide relevant program background to anyone interested in pursuing these research topics.

Great Lakes↗
USGS2021

A global dataset of inland fisheries expert knowledge

Inland fisheries and their freshwater habitats face intensifying effects from multiple natural and anthropogenic pressures. Fish harvest and biodiversity data remain largely disparate and severely deficient in many areas, which makes assessing and managing inland fisheries difficult. Expert knowledge is increasingly used to improve and inform biological or vulnerability assessments, especially in data-poor areas. Integrating expert knowledge on the distribution, intensity, and relative influence of human activities can guide natural resource management strategies and institutional resource allocation and prioritization. This paper introduces a dataset summarizing the expert-perceived state of inland fisheries at the basin (fishery) level. An electronic survey distributed to professional networks (June-September 2020) captured expert perceptions (n = 536) of threats, successes, and adaptive capacity to fisheries across 93 hydrological basins, 79 countries, and all major freshwater habitat types. This dataset can be used to address research questions with conservation relevance, including: demographic influences on perceptions of threat, adaptive capacities for climate change, external factors driving multi-stressor interactions, and geospatial threat assessments.

Scientific Data↗
USGS2007

Fort Collins Science Center: 2006 Accomplishments

In Fiscal Year 2006 (FY06), the U.S. Geological Survey (USGS) Fort Collins Science Center (FORT) continued research vital to U.S. Department of the Interior (DOI) science and management needs and associated USGS programmatic goals. FORT work also supported the science needs of other governmental departments and agencies as well as private cooperators. Specifically, FORT scientific research and technical assistance focused on client and partner agency needs and goals in the areas of biological information management, fisheries and aquatic systems, invasive species, status and trends of biological resources, terrestrial ecosystems, and wildlife resources. Highlights of FORT project accomplishments are described below under the USGS science program area with which each task is most closely associated.2 The work of FORT’s five branches (in 2006: Aquatic Systems and Technology Applications, Ecosystem Dynamics, Invasive Species Science, Policy Analysis and Science Assistance, and Species and Habitats of Federal Interest) often involves major partnerships with other agencies or cooperation with other USGS disciplines (Geology, Geography, Water Resources).

Open-File Report↗
USGS2021

Regional-scale variability in the movement ecology of marine fishes revealed by an integrative acoustic tracking network

Marine fish movement plays a critical role in ecosystem functioning and is increasingly studied with acoustic telemetry. Traditionally, this research has focused on single species and small spatial scales. However, integrated tracking networks, such as the Integrated Tracking of Aquatic Animals in the Gulf of Mexico (iTAG) network, are building the capacity to monitor multiple species over larger spatial scales. We conducted a synthesis of passive acoustic monitoring data for 29 species (889 transmitters), ranging from large top predators to small consumers, monitored along the west coast of Florida, USA, over 3 yr (2016-2018). Space use was highly variable, with some groups using all monitored areas and others using only the area where they were tagged. The most extensive space use was found for Atlantic tarpon Megalops atlanticus and bull sharks Carcharhinus leucas . Individual detection patterns clustered into 4 groups, ranging from occasionally detected long-distance movers to frequently detected juvenile or adult residents. Synchronized, alongshore, long-distance movements were found for Atlantic tarpon, cobia Rachycentron canadum , and several elasmobranch species. These movements were predominantly northbound in spring and southbound in fall. Detections of top predators were highest in summer, except for nearshore Tampa Bay where the most detections occurred in fall, coinciding with large red drum Sciaenops ocellatus spawning aggregations. We discuss the future of collaborative telemetry research, including current limitations and potential solutions to maximize its impact for understanding movement ecology, conducting ecosystem monitoring, and supporting fisheries management.

Marine Ecology Progress Series↗
USGS2023

Vulnerability to climate change of managed stocks in the California Current large marine ecosystem

Introduction: Understanding how abundance, productivity and distribution of individual species may respond to climate change is a critical first step towards anticipating alterations in marine ecosystem structure and function, as well as developing strategies to adapt to the full range of potential changes. Methods: This study applies the NOAA (National Oceanic and Atmospheric Administration) Fisheries Climate Vulnerability Assessment method to 64 federally-managed species in the California Current Large Marine Ecosystem to assess their vulnerability to climate change, where vulnerability is a function of a species’ exposure to environmental change and its biological sensitivity to a set of environmental conditions, which includes components of its resiliency and adaptive capacity to respond to these new conditions. Results: Overall, two-thirds of the species were judged to have Moderate or greater vulnerability to climate change, and only one species was anticipated to have a positive response. Species classified as Highly or Very Highly vulnerable share one or more characteristics including: 1) having complex life histories that utilize a wide range of freshwater and marine habitats; 2) having habitat specialization, particularly for areas that are likely to experience increased hypoxia; 3) having long lifespans and low population growth rates; and/or 4) being of high commercial value combined with impacts from non-climate stressors such as anthropogenic habitat degradation. Species with Low or Moderate vulnerability are either habitat generalists, occupy deep-water habitats or are highly mobile and likely to shift their ranges. Discussion: As climate-related changes intensify, this work provides key information for both scientists and managers as they address the long-term sustainability of fisheries in the region. This information can inform near-term advice for prioritizing species-level data collection and research on climate impacts, help managers to determine when and where a precautionary approach might be warranted, in harvest or other management decisions, and help identify habitats or life history stages that might be especially effective to protect or restore.

California, Oregon, Washington↗
USGS2009

The Adopt-a-Herring program as a fisheries conservation tool

Successful conservation depends on a scientifically literate public. We developed the adopt-a-Herring program to educate nonscientists about fisheries and watershed restoration. this interactive educational and outreach project encouraged coastal residents to be involved in local watershed restoration. In the northeastern United States, river herring (Alosa spp.) are an important component of many coastal watersheds and often are the object of conservation efforts. In order to understand river herring spawning behavior and to improve the effectiveness of restoration efforts, our research tracked these fish via radiotelemetry in the Ipswich River, Massachusetts. In our adopt-a-Herring Program, participating stakeholder organizations adopted and named individual tagged river herring and followed their movements online. We also made information available to our adopters on our larger research goals, the mission and activities of other research and management agencies, examples of human actions that adversely affect watersheds, and opportunities for proactive conservation. Research results were communicated to adopters through our project web page and end-of-the-season summary presentations. Both tools cultivated a personal interest in river herring, stimulated discussion about fisheries and watershed restoration, educated participants about the goals and methods of scientists in general, and initiated critical thinking about human activities that advance or impede sustainability.

Massachusetts↗
USGS2017

Standard methods for sampling freshwater fishes: Opportunities for international collaboration

With publication of Standard Methods for Sampling North American Freshwater Fishes in 2009, the American Fisheries Society (AFS) recommended standard procedures for North America. To explore interest in standardizing at intercontinental scales, a symposium attended by international specialists in freshwater fish sampling was convened at the 145th Annual AFS Meeting in Portland, Oregon, in August 2015. Participants represented all continents except Australia and Antarctica and were employed by state and federal agencies, universities, nongovernmental organizations, and consulting businesses. Currently, standardization is practiced mostly in North America and Europe. Participants described how standardization has been important for management of long-term data sets, promoting fundamental scientific understanding, and assessing efficacy of large spatial scale management strategies. Academics indicated that standardization has been useful in fisheries education because time previously used to teach how sampling methods are developed is now more devoted to diagnosis and treatment of problem fish communities. Researchers reported that standardization allowed increased sample size for method validation and calibration. Group consensus was to retain continental standards where they currently exist but to further explore international and intercontinental standardization, specifically identifying where synergies and bridges exist, and identify means to collaborate with scientists where standardization is limited but interest and need occur.

Fisheries↗
USGS2022

Underwater hearing in sea ducks with applications for reducing gillnet bycatch through acoustic deterrence

As diving foragers, sea ducks are vulnerable to underwater anthropogenic activity, including ships, underwater construction, seismic surveys and gillnet fisheries. Bycatch in gillnets is a contributing source of mortality for sea ducks, killing hundreds of thousands of individuals annually. We researched underwater hearing in sea duck species to increase knowledge of underwater avian acoustic sensitivity and to assist with possible development of gillnet bycatch mitigation strategies that include auditory deterrent devices. We used both psychoacoustic and electrophysiological techniques to investigate underwater duck hearing in several species including the long-tailed duck ( Clangula hyemalis ), surf scoter ( Melanitta perspicillata ) and common eider ( Somateria mollissima ). Psychoacoustic results demonstrated that all species tested share a common range of maximum auditory sensitivity of 1.0–3.0 kHz, with the long-tailed ducks and common eiders at the high end of that range (2.96 kHz), and surf scoters at the low end (1.0 kHz). In addition, our electrophysiological results from 4 surf scoters and 2 long-tailed ducks, while only tested at 0.5, 1 and 2 kHz, generally agree with the audiogram shape from our psychoacoustic testing. The results from this study are applicable to the development of effective acoustic deterrent devices or pingers in the 2–3 kHz range to deter sea ducks from anthropogenic threats.

Journal of Experimental Biology↗
USGS2007

The relationship between circulating ecdysteroids and chela allometry in male tanner crabs: Evidence for a terminal molt in the genus Chionoecetes

Whether male Tanner crabs, Chionoecetes bairdi, undergo a terminal molt associated with a change in claw allometry has long been debated. We measured molting hormone levels in captured male C. bairdi to assess the potential for molting. We plotted a frequency histogram of chela height to carapace width ratios and found a bimodal distribution of crabs with a ratio of approximately 0.18 separating the two modes. Male crabs with a ratio less than 0.18 were classified as "small-clawed" (SC) while crabs with a ratio greater than 0.18 were classified as "large-clawed" (LC). Circulating molting hormones between SC and LC crabs were compared. Significantly lower ecdysteroid levels were found in LC crabs, indicating that this morphotype had negligible potential for molting. Circulating ecdysteroids were measured in SC males of different shell conditions (soft, new, old, and very old) and no significant differences were found. This research suggests that the molt to LC morphology is a terminal molt. The results from this study have important implications for fisheries management because sub-legal LC males will not recruit into the fishery and removal of larger males may have long term effects on population size structure.

Journal of Crustacean Biology↗
USGS2011

Evaluation of LiDAR-acquired bathymetric and topographic data accuracy in various hydrogeomorphic settings in the Deadwood and South Fork Boise Rivers, West-Central Idaho, 2007

High-quality elevation data in riverine environments are important for fisheries management applications and the accuracy of such data needs to be determined for its proper application. The Experimental Advanced Airborne Research LiDAR (Light Detection and Ranging)-or EAARL-system was used to obtain topographic and bathymetric data along the Deadwood and South Fork Boise Rivers in west-central Idaho. The EAARL data were post-processed into bare earth and bathymetric raster and point datasets. Concurrently with the EAARL surveys, real-time kinematic global positioning system surveys were made in three areas along each of the rivers to assess the accuracy of the EAARL elevation data in different hydrogeomorphic settings. The accuracies of the EAARL-derived raster elevation values, determined in open, flat terrain, to provide an optimal vertical comparison surface, had root mean square errors ranging from 0.134 to 0.347 m. Accuracies in the elevation values for the stream hydrogeomorphic settings had root mean square errors ranging from 0.251 to 0.782 m. The greater root mean square errors for the latter data are the result of complex hydrogeomorphic environments within the streams, such as submerged aquatic macrophytes and air bubble entrainment; and those along the banks, such as boulders, woody debris, and steep slopes. These complex environments reduce the accuracy of EAARL bathymetric and topographic measurements. Steep banks emphasize the horizontal location discrepancies between the EAARL and ground-survey data and may not be good representations of vertical accuracy. The EAARL point to ground-survey comparisons produced results with slightly higher but similar root mean square errors than those for the EAARL raster to ground-survey comparisons, emphasizing the minimized horizontal offset by using interpolated values from the raster dataset at the exact location of the ground-survey point as opposed to an actual EAARL point within a 1-meter distance. The average error for the wetted stream channel surface areas was -0.5 percent, while the average error for the wetted stream channel volume was -8.3 percent. The volume of the wetted river channel was underestimated by an average of 31 percent in half of the survey areas, and overestimated by an average of 14 percent in the remainder of the survey areas. The EAARL system is an efficient way to obtain topographic and bathymetric data in large areas of remote terrain. The elevation accuracy of the EAARL system varies throughout the area depending upon the hydrogeomorphic setting, preventing the use of a single accuracy value to describe the EAARL system. The elevation accuracy variations should be kept in mind when using the data, such as for hydraulic modeling or aquatic habitat assessments.

Idaho↗
USGS2003

High latitude marine reserve research in Glacier Bay National Park

Glacier Bay National Park and Preserve is dominated by the marine waters that make up nearly one-fifth of the park’s area. Since the late 1800s, the nutrient rich waters of Glacier Bay have supported highly productive commercial fisheries. Congress closed fishing in parts of Glacier Bay National Park in 1999, creating one of North America’s largest marine reserves. Throughout the world, marine reserves are being promoted as effective tools for managing fisheries while simultaneously meeting marine conservation goals and maintaining marine biodiversity. Increases in individual size, density, biomass, and diversity have been demonstrated in studies of fish and invertebrates from both temperate and tropical marine reserves (Halpern 2003). Studies on the effectiveness of marine reserves at high latitudes, however, are rare. The formation of marine reserves in Glacier Bay National Park provides a unique opportunity for marine reserve research in a high latitude ecosystem.

Alaska Park Science↗
USGS2023

Stocking fish in inland waters: Opportunities and risks for sustainable food systems

Stocking is one of the foremost tools in the inland fisheries management toolbox, but it comes with both opportunities and risks. Stocking is often used as compensation for depleted wild populations, particularly where recruitment processes have been disrupted, but it can introduce disease, disrupt community structures, reduce genetic integrity, and cause conflicts between fishery stakeholders. Despite its widespread use, examples of effective stocking for food fisheries in inland waters are sparse in the peer-reviewed literature. Nevertheless, it is well established that stocking is frequently used to maintain fish yield, so there is a need to conduct the practice in a robust manner that minimises the potential risks. This paper serves as the front matter for a special section of Fisheries Management and Ecology focused on fresh waters feeding the world, which resulted from two panel sessions, one focused on aquaculture and one focused on stocking, hosted by the international InFish research network ( https://infish.org/ ). The paper highlights current practices of fish stock enhancement in inland waters for food, examines potential synergies and interactions of stock enhancement programmes with aquaculture, and provides an outline framework for responsible management of fish stock enhancement.

Fisheries Management and Ecology↗
USGS2020

Liquid chromatographic method for determining the concentration of bisazir in water

Barrier dams, traps, and lampricides are the techniques currently used by the Great Lakes Fishery Commission to control sea lampreys {Petromyzon marinug) in the Great Lakes. To augment these control techniques, a sterile-male-release research program was initiated at the Lake Huron Biological Station. Male sea lampreys were sterilized by intraperitoneal injection of the chemical sterilant P,P-bis(1-aziridinyl)- N methylphosphinothioic amide (bisazir). An analytical method was needed to quantitate the concentration of bisazir in water and to routinely verify that bisazir (>25 μg/L) does not persist in the treated effluent discharged from the sterilization facility to Lake Huron. A rapid, accurate, and sensitive liquid chromatographic (LC) method was developed for determining bisazir in water. Bisazir was dissolved in Lake Huron water; extracted and concentrated on a C 18 solid-phase extraction column; eluted with methanol; and quantitated by reversed-phase LC using a Cis column, amobile phase of 70% water and 30% methanol (v/v), and UV detection (205 nm). Bisazir retention time was 7-8 min; total run time was about 20 min. Method detection limit for bisazir dissolved in Lake Huron water was about 15 μg/L. Recovery from Lake Huron water fortified with bisazir at 100 μg/L was 94% (95% confidence interval, 90.2-98.2%).

Journal of AOAC International↗
USGS2000

Strategic science plan Salton Sea restoration project

The Salton Sea is an ecosystem in peril. Its prehistory consists of a series of intermittent lakes dependent on infrequent flooding of the Colorado River, while the modern Salton Sea originated from the desire to harness the flow of the Colorado River for irrigation. What began as an accident of this attempt is now a permanent inland sea supported by wastewater and agricultural drainage rather than Colorado River flood flows. However, environmental degradation is challenging the ability of the Sea to sustain the biological components that society has learned to value as characteristics of this waterbody. Increasing salinity and increasing frequency and magnitude of wildlife losses indicate the Sea is under severe environmental stress. The Salton Sea Restoration Project originated to reverse this degradation, to stabilize fluctuating water levels, and to provide a permanent waterbody that sustains values of the human society that uses it. The project foundation is provided by Public Law (PL) 102-575, passed by Congress in 1992. PL 102-575 directs the Secretary of the Interior to "conduct a research project for the development of a method or combination of methods to reduce and control salinity, provide endangered species habitat, enhance fisheries, and protect human recreational values . . . in the area of the Salton Sea." That PL was followed by the Salton Sea Reclamation Act of 1998 (PL 105-372), which directs the Secretary of the Interior to "complete all studies, including, but not limited to environmental and other reviews, of the feasibility and benefit-cost of various options that permit the continued use of the Salton Sea."

Report↗