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At least 559 records · Page 31Linked to original sources

Stream temperature prediction in a shifting environment: The influence of deep learning architecture

Stream temperature is a fundamental control on ecosystem health. Recent efforts incorporating process guidance into deep learning models for predicting stream temperature have been shown to outperform existing statistical and physical models. This performance is in part because deep learning architectures can actively learn spatiotemporal relationships that govern how water and energy propagate through a river network. However, exploration of how spatiotemporal awareness and process guidance influence a model's generalizability under shifting environmental conditions such as climate change is limited. Here, we use Explainable Artificial Intelligence (XAI) to interrogate how differing deep learning architectures affect a model's learned spatial and temporal dependencies, and how those learned dependencies affect a model's ability to maintain high accuracy when applied to unseen environmental conditions. Using the Delaware River Basin in the northeastern United States as a test case, we compare two spatiotemporally aware process-guided deep learning models for predicting stream temperature (a recurrent graph convolution network—RGCN, and a temporal convolution graph model—Graph WaveNet). Both models achieve equally high predictive performance when testing data are well represented in the training data (test root mean squared errors of 1.64°C and 1.65°C); however, Graph WaveNet significantly outperforms RGCN in 4 out of 5 experiments where test partitions represent different types of unseen environmental conditions. XAI results show that the architecture of Graph WaveNet leads to learned spatial relationships with greater fidelity to physical processes, and that this fidelity improves the generalizability of the model when applied to shifting and/or unseen environmental conditions.

Delaware River Basin↗

Hydrologic dynamics of ephemerally flooded playas in a dryland environment

Ephemerally flooded playas are common in the southwestern United States and globally in drylands. Often formed in closed basins, playas are depressions which inundate infrequently from local precipitation and streamflow produced near the playa or from upland areas. Few studies have quantified the hydrologic connectivity between upland catchments and playas using observations. Here, we used rain gauge-corrected precipitation from weather radar and water level measurements in 18 playas of the Chihuahuan Desert to identify precipitation thresholds leading to playa inundation over a 6.4-year period. Geospatial data sets on topography, soil properties, and vegetation cover were employed to determine the controls on inundation. Only 9.4% of all precipitation events above 1 mm led to inundation, with 69.8% of all inundations occurring during the North American monsoon (NAM, July-September). Mean and standard deviations (Std) of runoff ratios at all playas were 2.74 ± 4.08% and 3.29 ± 5.19% for annual and NAM periods. At the annual scale, playa inundation occurred when mean precipitation thresholds of 18.3 ± 7.5 mm (event total) and 12.0 ± 4.5 mm/hr (60-min intensity) were exceeded. Across all playas, inundation occurrence and volume were related most strongly to precipitation metrics and catchment area, with secondary controls of soil and terrain properties. The explanatory power of the derived regressions describing the inundation response across the playas were significantly improved when considering their geological origin. As a result, the inundation response classification system could be applied to ephemeral playas in other arid and semiarid landscapes.

New Mexico↗

A new amphibious earthquake catalog for the Alaska Peninsula: Training, testing, and applying machine learning earthquake picking in offshore and amphibious environments

The dual seismological developments of large-scale offshore observational networks and high-quality machine-learning earthquake detection and picking allow unprecedented seismicity detection in high hazard subduction zones. We develop a high resolution machine learning enhanced seismicity catalog for the Alaska Peninsula stretch of the Alaska-Aleutian Subduction Zone, which was instrumented with both land and ocean bottom seismometers during the Alaska Amphibious Community Seismic Experiment (AACSE) in 2018–2019. We first use an analyst-checked AACSE catalog to develop new local land and ocean-bottom earthquake waveform training data sets, which we then use to fine-tune the EQTransformer machine learning picking model. In the process, we test multiple training strategies for best picking performance on ocean-bottom waveform data. We evaluate the effect of choice of pre-trained starting model, addition of waveform bandpass filtering, and choice of random metadata split. We find no training strategy to be substantially better than the others. Instead, simply having a local waveform data set to fine-tune the picking model substantially improves performance on both the ocean-bottom and land seismic data from AACSE. We finally apply the separately trained land and ocean-bottom models to continuous seismic data for AACSE and use an iterative catalog refinement method to detect new small-magnitude seismicity. The machine learning enhanced catalog has roughly 3x more earthquakes than the analyst-checked catalog, and the magnitude of completeness is regionally variable but decreases 0.1–0.4 magnitude units. With more small seismicity detected, seismicity patterns mirror prior observations in the region. Detection is especially improved far offshore and in the outer rise.

Alaska↗

Origin and depositional environment of clastic deposits in the Hilo drill hole, Hawaii

Volcaniclastic units cored at depths of about 87, 164, 178, 226, and 246 m below sea level and carbonate units located between depths of 27 and 53 m below sea level in the Hilo drill core were found to be deposited at or near sea level. Four of these units are hydroclastic deposits, formed when subaerially erupted Mauna Loa lava flows entered the ocean and fragmented to produce quenched, glassy fragments during hydrovolcanic explosions. Ash units 24 and 26, at 178 m depth, accumulated at sea level in a freshwater bog. They contain pyroxenes crystallized from tholeiitic magma that we infer erupted explosively at the summit of Kilauea volcano. Two carbon‐rich layers from these ashes have a weighted average radiocarbon age of 38.6 ± 0.9 ka; the ashes probably correlate with the oldest and thickest part of the Pahala ash. Ash unit 44, at the transition from Mauna Kea to Mauna Loa lava flows, was probably nearly 3.2 m thick and is inferred to be equivalent to the lower thick part of the composite Homelani ash mapped in Hilo and on the flanks of Mauna Kea. The age of this part of Homelani ash is between 128 ± 33 and 200 ± 10 ka; it may have erupted subglacially during the Pohakuloa glacial maxima on Mauna Kea. Beach sand units 12 and 22 were derived from nearby Mauna Loa and Mauna Kea lava flows. The middle of beach sand unit 38 was derived mainly from lava erupted near the distal end of the subaerial east rift zone of Kilauea volcano; these sands were transported about 33 km northwest to Hilo Bay by prevailing longshore currents. Combined age, depth, and sea level markers in the core allow us to determine that lava flow recurrence intervals averaged one flow every 4 kyr during the past 86 kyr and one flow every 16 kyr between 86 and 200 ka at the drill site and that major explosive eruptions that deposit thick ash in Hilo have occurred only twice in the last 400 kyr. These recurrence intervals support the moderate lava flow hazard zonation (zone 3) for coastal Hilo previously determined from surficial mapping.

Journal of Geophysical Research B: Solid Earth↗

Groundwater transport of strontium 90 in a glacial outwash environment

As part of the investigation of groundwater contamination at a uranium-scrap recovery plant at Wood River Junction, Rhode Island, laboratory experiments led to the development of a model for predicting the transport of strontium 90 in glacial outwash sediments based on an approximate mechanism for ion exchange. The multicomponent system was simplified to two components by regarding all exchangeable cations other than strontium 90 as a single component. The binary ion-exchange parameter was a function of the variable, total ion concentration. A one-dimensional solute transport model was formulated to evaluate the time necessary for natural groundwater flow to remove the strontium 90 contamination plume from the groundwater system to the Pawcatuck River. The finite difference transport equations were solved sequentially for total ion concentrations, then strontium 90 concentrations. Clay-free quartz and feldspar sands at the study site have little potential for strontium 90 sorption, and high calcium, magnesium, and sodium concentrations compete for the few ion exchange sites. As the total ion concentration plume moves out of the system, ion exchange of strontium 90 increases, reducing the strontium 90 concentration in the groundwater. Cleanout times predicted using the binary ion exchange mechanism were about two thirds of those predicted using a constant distribution coefficient. It is suggested that this type of model can simulate solute transport more realistically in many groundwater systems where the total ion concentration is not constant.

Rhode Island↗

Microbial formation of labile organic carbon in Antarctic glacial environments

Roughly six petagrams of organic carbon are stored within ice worldwide. This organic carbon is thought to be of old age and highly bioavailable. Along with storage of ancient and new atmospherically deposited organic carbon, microorganisms may contribute substantially to the glacial organic carbon pool. Models of glacial microbial carbon cycling vary from net respiration to net carbon fixation. Supraglacial streams have not been considered in models although they are amongst the largest ecosystems on most glaciers and are inhabited by diverse microbial communities. Here we investigate the biogeochemical sequence of organic carbon production and uptake in an Antarctic supraglacial stream in the McMurdo Dry Valleys using nanometre-scale secondary ion mass spectrometry, fluorescence spectroscopy, stable isotope analysis and incubation experiments. We find that heterotrophic production relies on highly labile organic carbon freshly derived from photosynthetic bacteria rather than legacy organic carbon. Exudates from primary production were utilized by heterotrophs within 24 h, and supported bacterial growth demands. The tight coupling of microbially released organic carbon and rapid uptake by heterotrophs suggests a dynamic local carbon cycle. Moreover, as temperatures increase there is the potential for positive feedback between glacial melt and microbial transformations of organic carbon.

Nature Geoscience↗

Environment, taxonomy, and socioeconomics predict non-imperilment in freshwater fishes

Freshwater fishes are among the most threatened taxa, yet conservation assessments remain incomplete for many species. Freshwater fishes provide essential ecosystem services such as food security, recreational opportunities, and cultural significance. Despite heavy alterations to freshwater ecosystems, the reasons for species’ sensitivity and resistance to imperilment are unclear. To address this need, we develop a machine learning framework to predict global imperilment status for 10,631 freshwater fish species using a comprehensive set of environmental, socioeconomic, and intrinsic species-level predictors. Using updated IUCN Red List data, we train and validate Random Forest classifiers to distinguish imperiled (Vulnerable, Endangered, Critically Endangered) from non-imperiled species. We examine the relative influence of 52 variables derived from 12 global sources describing extrinsic environmental and socioeconomic factors and intrinsic species-specific characteristics. Our models achieve higher accuracy for non-imperiled species (90.1%) compared to imperiled species (81.8%), reflecting the greater heterogeneity of threats and conditions driving imperilment. Across models, key predictors include habitat variables, taxonomic order, hydrological characteristics, and disturbance indicators, underscoring the interplay between ecology, geography, and human pressures. This integrative, reproducible approach demonstrates the utility of machine learning for guiding proactive conservation and provides a scalable framework for global biodiversity risk assessment.

Nature Communications↗

Invasive brown treesnakes (Boiga irregularis) move short distances and have small activity areas in a high prey environment

Animal movements reflect temporal and spatial availability of resources as well as when, where, and how individuals access such resources. To test these relationships for a predatory reptile, we quantified the effects of prey abundance on the spatial ecology of invasive brown treesnakes ( Boiga irregularis ) on Guam. Five months after toxicant-mediated suppression of a brown treesnake population, we simultaneously used visual encounter surveys to generate relative rodent abundance and radiotelemetry of snakes to document movements of surviving snakes. After snake suppression, encounter rates for small mammals increased 22-fold and brown treesnakes had smaller mean daily movement distances (24 ± 13 m/day, x ¯ "> x ± SD) and activity areas (5.47 ± 5 ha) than all previous observations. Additionally, snakes frequenting forest edges, where our small mammal encounters were the highest, had smaller mean daily movement distances and three-dimensional activity volumes compared to those within the forest interior. Collectively, these results suggest that reduced movements by snakes were in part a response to increased prey availability. The impact of prey availability on snake movement may be a management consideration when attempting to control cryptic invasive species using tools that rely on movement of the target species to be effective,

Guam↗

Resolving global versus local/regional Pu sources in the environment using sector ICP-MS

Sector inductively coupled plasma mass spectrometry is a versatile method for the determination of plutonium activities and isotopic compositions in samples containing this element at fallout levels. Typical detection limits for 239+240Pu are 0.1, 0.02 and 0.002 Bq kg -1Pu for samples sizes of 0.5 g, 3 g, and 50 g of soil, respectively. The application of sector ICP-MS-based Pu determinations is demonstrated in studies in sediment chronology, soil Pu inventory and depth distribution, and the provenance of global fallout versus local or regional Pu sources. A sediment core collected from Sloans Lake (Denver, Colorado, USA) exhibits very similar 137Cs and 239+240Pu activity profiles; 240Pu/239Pu atom ratios indicate possible small influences from the Nevada Test Site and/or the Rocky Flats Environmental Technology Site. An undisturbed soil profile from Lockett Meadow (Flagstaff, Arizona, USA) exhibits an exponential decrease in 239+240Pu activity versus depth; 240Pu/239Pu in the top 3 cm is slightly lower than the global fallout range of 0.180 ?? 0.014 due to possible regional influence of Nevada Test Site fallout. The 239??240Pu inventory at Lockett Meadow is 56 ?? 4 Bq m-2, consistent with Northern Hemisphere mid-latitude fallout. Archived NdF3 sources, prepared from Polish soils, demonstrate that substantial 239+240Pu from the 1986 Chernobyl disaster has been deposited in north eastern regions of Poland; compared to global fallout, Chernobyl Pu exhibits higher abundances of 240Pu and 241Pu. The ratios 240Pu/239pu and 241Pu/239Pu co-vary and range from 0.186-0.348 and 0.0029-0.0412, respectively, in forest soils (241Pu/239Pu = 0.2407??[240Pu/239Pu] - 0.0413; r2 = 0.9924). ?? The Royal Society of Chemistry 2004.

Journal of Analytical Atomic Spectrometry↗

Infectious pancreatic necrosis virus in the environment: Relationship to effluent from aquaculture facilities

Effluents from three fish hatcheries were monitored for the discharge and subsequent downstream distribution of infectious pancreatic necrosis virus (IPNV). Samples of springwater and surface water, and tissues from salmonid and non-salmonid fish were assayed for IPNV. Water samples were processed to recover virus by adsorption to an electropositive, microporous filter matrix. No IPNV was detected in surface water collected above fish hatcheries or in hatchery springwater supplies. The virus could be detected for at least 19.3 km below the point of effluent discharge from hatcheries and the prevalence of IPNV infection in stream-resident fish was 2.8%.

Journal of Fish Diseases↗

The effects of drought and fire in the extirpation of an abundant semi-aquatic turtle from a lacustrine environment in the southwestern USA

We documented a significant mortality event affecting a southwestern pond turtle ( Actinemys pallida ) population living in a lake in southern California, USA. The area around the lake was impacted by a large wildland fire in 2013 that occurred during a protracted drought. As the mortality event was still unfolding, we collected data in 2014 on water quality, demographic structure, and short-term survivorship of the population. Water quality was poor with low levels of dissolved oxygen and high salinity of up to 45.90 ppt. Many turtles were severely emaciated and coated with a pale mineralized layer on their shells and skin. Estimated survival rate was low leading to a projected 90% decline in 134 days and a high probability of extirpation within a year. The lake was dry in September 2015 with no evidence of live turtles. Necropsies and low volumetric body condition indices suggested death by starvation. Although this semi-aquatic species has the ability to aestivate in upland habitats during periods of low water or move to other nearby water bodies, it is unlikely that many were able to do so because of their extremely poor condition and the severity of the drought conditions throughout the area.

Knowledge and Management of Aquatic Ecosystems↗

Using the KINEROS2 modeling framework to evaluate the increase in storm runoff from residential development in a semi-arid environment

The increase in runoff from urbanization is well known; one extreme example comes from a 13 hectare residential neighborhood in southeast Arizona where runoff was 27 times greater than an adjacent grassland watershed over a forty‐month period from 2005 to 2008. Rainfall‐runoff modeling using the newly‐described KINEROS2 urban element and tension infiltrometer measurements indicate that 17±14 percent of this increase in runoff is due to a 53 percent decrease in the saturated hydraulic conductivity of constructed pervious areas, as compared to the undeveloped grassland. Directly connected impervious areas, primarily streets and driveways, cause 56 percent of the increase in runoff, and indirectly connected impervious areas, primarily rooftops and sidewalks, and a decrease in canopy interception account for the remaining 27 percent increase. Tension infiltrometer measurements show that saturated hydraulic conductivity (K s ) is about double in the grassland watershed than in the urban watershed, 6.2 ± 3.5mm/hr and 2.9 ± 1.6mm/hr, respectively. K s in the urban watershed identified from calibrating the rainfall‐runoff model to measured runoff is 9.5 ± 2.8 mm/hr—higher than what was measured but much lower than the 26 mm/hr value indicated by a soil‐texture based KINEROS2 parameter look‐up table. A new component of the KINEROS2 modeling framework, the urban element, forms the basis for the model by simulating a contiguous row of houses and the adjoining street as a series of pervious and impervious overland flow planes. Tests using different levels of discretization found that watershed geometry can be represented in a simplified manner, although more detailed discretization led to better model performance.

Arizona↗

Movement ecology of adult and juvenile spotted turtles (Clemmys guttata) in a seasonally dynamic environment

Context Understanding the temporal and spatial scales at which wildlife move is vital for conservation and management. This is especially important for semi-aquatic species that make frequent inter-wetland movements to fulfil life-history requirements. Aims We aimed to investigate the drivers of movement and space-use of the imperilled spotted turtle ( Clemmys guttata ), a seasonal wetland specialist, in three large, isolated wetland complexes in Virginia, USA. Methods We used VHF radio-transmitters to radio-locate adult and juvenile turtles, and estimated movement and space-use during their active and aestivation seasons (March–August). We then used generalised linear mixed models to examine how movement and space-use varied, based on intrinsic turtle characteristics and extrinsic wetland and climatic factors. Key results We show that, on average, individual spotted turtles used five wetlands per year (range 3–13), and that their inter-wetland movement and movement distance varied seasonally in accordance with wetland availability and breeding phenology. Spotted turtle movement and space-use was influenced by the arrangement and size of the wetland complexes, with turtles moving further and occupying larger home-ranges as size and distance between wetlands increased. Inter-wetland movement was not influenced by intrinsic turtle effects but larger adult turtles moved further, used more wetlands, and had larger home-ranges than smaller turtles. Conclusions Turtle responses to variation in season and wetland configuration highlight the need for complex and dynamic landscapes required to sustain this species. Implications This study has important conservation implications showing that spotted turtles rely on a large number of diverse wetlands, as well as upland habitat, to fulfil their resource needs – and that these habitat associations vary seasonally. Results from our study can aid the understanding of spatial and temporal variation in patch characteristics (e.g. quality and extent) and inter-patch movement by organisms, which is critical for the conservation and management of semi-aquatic species and other organisms that occupy patchy habitat complexes.

Wildlife Research↗

Environment, agriculture, and settlement patterns in a marginal Polynesian landscape

Beginning ca. A.D. 1400, Polynesian farmers established permanent settlements along the arid southern flank of Haleakala Volcano, Maui, Hawaiian Islands; peak population density (43-57 persons per km2) was achieved by A.D. 1700-1800, and it was followed by the devastating effects of European contact. This settlement, based on dryland agriculture with sweet potato as a main crop, is represented by >3,000 archaeological features investigated to date. Geological and environmental factors are the most important influence on Polynesian farming and settlement practices in an agriculturally marginal landscape. Interactions between lava flows, whose ages range from 3,000 to 226,000 years, and differences in rainfall create an environmental mosaic that constrained precontact Polynesian farming practices to a zone defined by aridity at low elevation and depleted soil nutrients at high elevation. Within this productive zone, however, large-scale agriculture was concentrated on older, tephra-blanketed lava flows; younger flows were reserved for residential sites, small ritual gardens, and agricultural temples.

Hawaii↗

Community ecology in a changing environment: Perspectives from the Quaternary

Community ecology and paleoecology are both concerned with the composition and structure of biotic assemblages but are largely disconnected. Community ecology focuses on existing species assemblages and recently has begun to integrate history (phylogeny and continental or intercontinental dispersal) to constrain community processes. This division has left a “missing middle”: Ecological and environmental processes occurring on timescales from decades to millennia are not yet fully incorporated into community ecology. Quaternary paleoecology has a wealth of data documenting ecological dynamics at these timescales, and both fields can benefit from greater interaction and articulation. We discuss ecological insights revealed by Quaternary terrestrial records, suggest foundations for bridging between the disciplines, and identify topics where the disciplines can engage to mutual benefit.

PNAS↗

The dominance and growth of shallow groundwater resources in continuous permafrost environments

Water is a limited resource in Arctic watersheds with continuous permafrost because freezing conditions in winter and the impermeability of permafrost limit storage and connectivity between surface water and deep groundwater. However, groundwater can still be an important source of surface water in such settings, feeding springs and large aufeis fields that are abundant in cold regions and generating runoff when precipitation is rare. Whether groundwater is sourced from suprapermafrost taliks or deeper regional aquifers will impact water availability as the Arctic continues to warm and thaw. Previous research is ambiguous about the role of deep groundwater, leading to uncertainty regarding Arctic water availability and changing water resources. We analyzed chemistry and residence times of spring, stream, and river waters in the continuous permafrost zone of Alaska, spanning the mountains to the coastal plain. Water chemistry and age tracers show that surface waters are predominately sourced from recent precipitation and have short (<50 y) subsurface residence times. Remote sensing indicates trends in the areal extent of aufeis over the last 37 y, and correlations between aufeis extent and previous year summer temperature. Together, these data indicate that surface waters in continuous permafrost regions may be impacted by short flow paths and shallow suprapermafrost aquifers that are highly sensitive to climatic and hydrologic change over annual timescales. Despite the lack of connection to regional aquifers, continued warming and permafrost thaw may promote deepening of the shallow subsurface aquifers and creation of shallow taliks, providing some resilience to Arctic freshwater ecosystems.

Proceedings of the National Academy of Sciences↗

Patterns of fish assemblage structure and habitat use among main- and side-channel environments in the lower Kootenai River, Idaho

The lower Kootenai River, Idaho, was sampled during the summers of 2012 and 2013 to evaluate its fish assemblage structure at seven sites within main- and side-channel habitats where large-scale habitat rehabilitation was undertaken. Understanding the current patterns of fish assemblage structure and their relationships with habitat is important for evaluating the effects of past and future rehabilitation projects on the river. Species-specific habitat associations were modeled, and the variables that best explained the occurrence and relative abundance of fish were identified in order to guide future habitat rehabilitation so that it benefits native species. The results indicated that the side-channel habitats supported higher species richness than the main-channel habitats and that nonnative fishes were closely associated with newly rehabilitated habitats. This research provides valuable insight on the current fish assemblages in the Kootenai River and the assemblage-level responses that may occur as a result of future rehabilitation activities.

Idaho↗

A unique approach to estimating lateral anisotropy in complex geohydrologic environments

Aquifers in fractured rock or karstic settings are likely to have anisotropic transmissivity distributions. Aquifer tests that are performed in these settings also are frequently affected by leakage from adjacent confining units. Finite-difference models such as MODFLOW are convenient tools for estimating the hydraulic characteristics of the stressed aquifer and adjacent confining units but are poor tools for the estimation of lateral anisotropy. This limitation of finite-difference methods can be overcome by application of the spin method, a technique whereby the positions of the observation wells are rotated about the production well to estimate anisotropy and orientation. Formal parameter estimation is necessary to analyze aquifer tests because of the number of parameters that are estimated. As a test, transmissivity, anisotropy, and orientation were successfully estimated for a simple hypothetical problem with known properties. The technique also was applied to estimate hydraulic properties of the Santee Limestone/Black Mingo (SL/BM) aquifer and a leaky confining unit beneath Charleston, South Carolina. A 9-day aquifer test with an average discharge of 6441/min was analyzed numerically. Drawdowns in the SL/BM aquifer and confining unit were simulated with a 12-layer MODFLOW model that was discretized into 81 rows of 81 columns. Simulated drawdowns at seven observation wells that ranged from 23 to 2700 m from the production well were matched to measured drawdowns. Transmissivity estimated along the minor axis ranged from 10 to 15 m 2 /day and along the major axis ranged from 80 to 10Om 2 /day. The major axis of transmissivity was oriented along compass heading 116° (degrees clockwise from north), which agrees with geologic interpretations. Vertical hydraulic conductivity and specific storage estimates for the overlying confining unit were 4 x 10 -5 m/day and 2 x 10 -4 1/m, respectively.

South Carolina↗