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Designing a global assessment of climate change on inland fishes and fisheries: knowns and needs

To date, there are few comprehensive assessments of how climate change affects inland finfish, fisheries, and aquaculture at a global scale, but one is necessary to identify research needs and commonalities across regions and to help guide decision making and funding priorities. Broadly, the consequences of climate change on inland fishes will impact global food security, the livelihoods of people who depend on inland capture and recreational fisheries. However, understanding how climate change will affect inland fishes and fisheries has lagged behind marine assessments. Building from a North American inland fisheries assessment, we convened an expert panel from seven countries to provide a first-step to a framework for determining how to approach an assessment of how climate change may affect inland fishes, capture fisheries, and aquaculture globally. Starting with the small group helped frame the key questions (e.g., who is the audience? What is the best approach and spatial scale?). Data gaps identified by the group include: the tolerances of inland fisheries to changes in temperature, stream flows, salinity, and other environmental factors linked to climate change, and the adaptive capacity of fishes and fisheries to adjust to these changes. These questions are difficult to address, but long-term and large-scale datasets are becoming more readily available as a means to test hypotheses related to climate change. We hope this perspective will help researchers and decision makers identify research priorities and provide a framework to help sustain inland fish populations and fisheries for the diversity of users around the globe.

Reviews in Fish Biology and Fisheries↗

Endocrine active chemicals and endocrine disruption in Minnesota streams and lakes: Implications for aquatic resources, 1994-2008

The U.S. Geological Survey, in cooperation with St. Cloud State University, Minnesota Department of Health, Minnesota Pollution Control Agency, Minnesota Department of Natural Resources, Metropolitan Council Environmental Services, and the University of Minnesota, has conducted field monitoring studies and laboratory research to determine the presence of endocrine active chemicals and the incidence of endocrine disruption in Minnesota streams and lakes during 1994–2008. Endocrine active chemicals are chemicals that interfere with the natural regulation of endocrine systems, and may mimic or block the function of natural hormones in fish or other organisms. This interference commonly is referred to as endocrine disruption. Indicators of endocrine disruption in fish include vitellogenin (female egg yolk protein normally expressed in female fish) in male fish, oocytes present in male fish testes, reduced reproductive success, and changes in reproductive behavior. The results from a series of studies during 1994–2008 demonstrate that endocrine active chemicals are present in Minnesota surface waters, indicating that aquatic organism exposure is likely. Endocrine active chemicals have been identified in wastewater-treatment plant effluent and surface waters downstream from discharge of wastewater-treatment plant effluent throughout Minnesota at low concentrations. Biological indicators of endocrine disruption have been detected in wild fish throughout Minnesota at sites directly downstream from wastewater-treatment plant effluent, indicating that endocrine active chemicals in effluent contribute to endocrine disruption in fish. This finding was confirmed in a controlled study exposing fathead minnows to wastewater-treatment plant effluent at an onsite fish exposure laboratory. During this controlled study, changes in biological responses coincided with changes in wastewater-treatment plant effluent composition demonstrating that effluent effects on fish endocrine systems are temporally variable. Although chemicals contributing to endocrine disruption in fish are complex, several laboratory studies have further confirmed that certain classes of chemicals, such as hormones and alkylphenols, which are components of wastewater-treatment plant effluent, affect the endocrine systems of fish through biochemical, structural, and behavioral disruption. Although these studies indicate that wastewater-treatment plant effluent is a conduit for endocrine active chemicals to surface waters, endocrine active chemicals also were present in surface waters with no obvious wastewater-treatment plant effluent sources. Endocrine active chemicals were detected and indicators of endocrine disruption in fish were measured at numerous sites upstream from discharge of wastewater-treatment plant effluent. These observations indicate that other unidentified sources of endocrine active chemicals exist, such as runoff from land surfaces, atmospheric deposition, inputs from onsite septic systems, or other groundwater sources. Alternatively, some endocrine active chemicals may not yet have been identified or measured. The presence of biological indicators of endocrine disruption in male fish indicates that the fish are exposed to endocrine active chemicals. However indicators of endocrine disruption in male fish does not indicate an effect on fish reproduction or changes in fish populations.

Minnesota↗

Cryptic invasion of Northern Leopard Frogs ( Rana pipiens ) across phylogeographic boundaries and a dilemma for conservation of a declining amphibian

Anthropogenic introduction of species is a major contributor to loss of biodiversity. Translocations within the range of a species are less frequently recognized, but have the potential for negative effects as well. Genetic mixing may lead to loss of local adaptations or further decline through outbreeding depression. These cryptic invasions may be quite difficult to recognize, but genetic tools can be used to recognize and monitor such intraspecific introductions. Conversely, translocations within species can be an important conservation tool to reduce inbreeding depression and replace lost genetic diversity. Thus, cryptic invasions can be either an aid or a hindrance to conservation efforts. We tested for the presence of non-native genotypes and assessed the extent and nature of introgression in populations of Northern Leopard Frog ( Rana pipiens ) in the southwestern US, where populations have declined to a few remnant populations. The most abundant and diverse complex of populations in the region contained a mitochondrial haplotype that was not native to the western US, probably resulting from the introduction of released pets, laboratory animals, or release during fish stocking. These non-native haplotypes were well integrated into a large complex of ponds and lakes, contributing to high genetic diversity in this area. Logistically, the geographic extent of non-native genetic influence within this population precludes eliminating or controlling the non-native component of this population. We recommend assessing the progress and fate of the introgression over time—along with population fitness parameters—to determine whether this introduction is beneficial or detrimental to population persistence. Meanwhile, translocations from nearby locations with similar environmental conditions have the best prospects for avoiding problems with outbreeding depression in other declining populations and will also most effectively preserve regional genetic diversity.

Biological Invasions↗

At Palmyra Atoll, the fish‐community environmental DNA signal changes across habitats but not with tides

At Palmyra Atoll, the environmental DNA (eDNA) signal on tidal sand flats was associated with fish biomass density and captured 98%–100% of the expected species diversity there. Although eDNA spilled over across habitats, species associated with reef habitat contributed more eDNA to reef sites than to sand‐flat sites, and species associated with sand‐flat habitat contributed more eDNA to sand‐flat sites than to reef sites. Tides did not disrupt the sand‐flat habitat signal. At least 25 samples give a coverage >97.5% at this diverse, tropical, marine system.

Journal of Fish Biology↗

Literature review for candidate chemical control agents for nonnative crayfish

Nonnative crayfish are an immediate and pervasive threat to aquatic environments and their biodiversity. Crayfish control can be achieved by physical methods, water chemistry modification, biological methods, biocidal application, and application of crayfish physiology modifiers. The purpose of this report is to identify suitable candidates for potential control of nonnative crayfish through a comprehensive literature review. This review focuses on control methods, specifically on the available data to support registration of a crayfish pesticide. The literature search resulted in 28,058 documents, which were searched to determine if they contained information on physical, chemical, biological, and (or) biocidal approaches to control crayfish. Pesticides directly toxic to crayfish in this literature review include: pyrethroids (natural pyrethrins and synthetic), fipronil, mirex, antimycin-A, and rotenone. Some chemicals, such as diflubenzuron and emamectin benzoate, alter crayfish physiology resulting in a lower pesticide dose needed to control crayfish. Environmental damage, application rate, exposure duration, nontarget effects, environmental persistence, and registration data gaps were used as criteria to define which pesticides are potentially selective to crayfish, along with which have the greatest amount of data to support registration by the U.S. Environmental Protection Agency. Synthetic pyrethroids were identified as the most likely candidate to be developed into a crayfish pesticide. A type-2 synthetic pyrethroid, cyfluthrin, has the greatest potential for eradicating nonnative crayfish. Although other invertebrate species will be negatively affected at the concentrations required for crayfish control, compared with other pyrethroids and other potential control chemicals, cyfluthrin offers rapid ecosystem recovery due to being more selective, having fewer effects on native fish, and having a short aquatic persistence. Cyfluthrin also has few data gaps for U.S. Environmental Protection Agency registration purposes.

Open-File Report↗

Vegetation community response to tidal marsh restoration of a large river estuary

Estuaries are biologically productive and diverse ecosystems that provide ecosystem services including protection of inland areas from flooding, filtering freshwater outflows, and providing habitats for fish and wildlife. Alteration of historic habitats, including diking for agriculture, has decreased the function of many estuarine systems, and recent conservation efforts have been directed at restoring these degraded areas to reestablish their natural resource function. The Nisqually Delta in southern Puget Sound is an estuary that has been highly modified by restricting tidal flow, and recent restoration of the delta contributed to one of the largest tidal salt marsh restorations in the Pacific Northwest. We correlated the response of nine major tidal marsh species to salinities at different elevation zones. Our results indicated that wetland species richness was not related to soil pore-water salinity (R2 = 0.03), but were stratified into different elevation zones (R2 = 0.47). Thus, restoration that fosters a wide range of elevations will provide the most diverse plant habitat, and potentially, the greatest resilience to environmental change.

Washington↗

Can ozone be used to control the spread of freshwater Aquatic Invasive Species?

The introduction of aquatic invasive species to non-native habitats can cause negative ecological effects and also billions of dollars in economic damage to governments and private industries. Once aquatic invasive species are introduced, eradication may be difficult without adversely affecting native species and habitats, urging resource managers to find preventative methods to protect non-invaded areas. The use of ozone (O 3 ) as a non-physical barrier has shown promise as it is lethal to a wide range of aquatic taxa, requires a short contact time, and is relatively environmentally safe in aquatic systems when compared to other chemicals. However, before O 3 can be considered as an approach to prevent the spread of aquatic invasive species, its effects on non-target organisms and already established aquatic invasive species must be fully evaluated. A review of the current literature was conducted to summarize data regarding the effects of O 3 on aquatic taxa including fish, macroinvertebrates, zooplankton, phytoplankton, microbes, and pathogens. In addition, we assessed the practicality of ozone applications to control the movement of aquatic invasive species, and identified data gaps concerning the use of O 3 as a non-physical barrier in field applications.

Management of Biological Invasions↗

Microplastics in Lake Mead National Recreation Area, USA: Occurrence and biological uptake

Microplastics are an environmental contaminant of growing concern, but there is a lack of information about microplastic distribution, persistence, availability, and biological uptake in freshwater systems. This is especially true for large river systems like the Colorado River that spans multiple states through mostly rural and agricultural land use. This study characterized the quantity and morphology of microplastics in different environmental compartments in two large reservoirs along the Colorado River: Lakes Mead and Mohave, within Lake Mead National Recreation Area. To assess microplastic occurrence, surface water and surficial sediment were sampled at a total of nine locations. Sampling locations targeted different sub-basins with varying levels of anthropogenic impact. Las Vegas Wash, a tributary which delivers treated wastewater to Lake Mead, was also sampled. A sediment core (33 cm long, representing approximately 19 years) was extracted from Las Vegas Bay to assess changes in microplastic deposition over time. Striped bass (Morone saxatilis), common carp (Cyprinus carpio), quagga mussels (Dreissena bugensis), and Asian clams (Corbicula fluminea) were sampled at a subset of locations to assess biological uptake of microplastics. Microplastic concentrations were 0.44-9.7 particles/cubic meter at the water surface and 87.5-1,010 particles/kilogram dry weight (kg dw) at the sediment surface. Sediment core concentrations were 220-2,040 particles/kg dw, with no clear increasing or decreasing trend over time. Shellfish microplastic concentrations ranged from 2.7-105 particles/organism, and fish concentrations ranged from 0-19 particles/organism. Fibers were the most abundant particle type found in all sample types. Although sample numbers are small, microplastic concentrations appear to be higher in areas of greater anthropogenic impact. Results from this study improve our understanding of the occurrence and biological uptake of microplastics in Lake Mead National Recreation Area, and help fill existing knowledge gaps on microplastics in freshwater environments in the southwestern U.S.

Nevada↗

Avian predator buffers against variability in marine habitats with flexible foraging behavior

How well seabirds compensate for variability in prey abundance and composition near their breeding colonies influences their distribution and reproductive success. We used tufted puffins ( Fratercula cirrhata ) as forage fish samplers to study marine food webs from the western Aleutian Islands (53°N, 173°E) to Kodiak Island (57°N, 153°W), Alaska, during August 2012–2014. Around each colony we obtained data on: environmental characteristics (sea surface temperature and salinity, seafloor depth and slope, tidal range, and chlorophyll- a ), relative forage fish biomass (hydroacoustic backscatter), and seabird community composition and density at-sea. On colonies, we collected puffin chick-meals to characterize forage communities and determine meal energy density, and measured chicks to obtain a body condition index. There were distinct environmental gradients from west to east, and environmental variables differed by ecoregions: the (1) Western-Central Aleutians, (2) Eastern Aleutians, and, (3) Alaska Peninsula. Forage fish biomass, species richness, and community composition all differed markedly between ecoregions. Forage biomass was strongly correlated with environmental gradients, and environmental gradients and forage biomass accounted for ~ 50% of the variability in at-sea density of tufted puffins and all seabird taxa combined. Despite the local and regional variability in marine environments and forage, the mean biomass of prey delivered to puffin chicks did not differ significantly between ecoregions, nor did chick condition or puffin density at-sea. We conclude that puffins can adjust their foraging behavior to produce healthy chicks across a wide range of environmental conditions. This extraordinary flexibility enables their overall success and wide distribution across the North Pacific Ocean.

Aleutian Islands, Gulf of Alaska↗

Biological and practical tradeoffs in planting techniques for submerged aquatic vegetation

Global loss of submerged aquatic vegetation (SAV) and associated ecosystem function has prompted an interest in SAV revegetation, particularly where underlying stressors such as nutrient enrichment are mitigated, yet natural recruitment remains low. Typically, SAV is hand-planted, but alternative reliable and practically scalable SAV planting techniques are needed. In mesocosms, we evaluated five planting techniques: 1) hand planting, anchoring using 2) fishing weights and 3) plaster blocks, and sediment-added methods using 4) peat pots and 5) burlap-wraps (“burritos”). Anchoring and sediment-added techniques were also field evaluated at four locations within a single lake. In mesocosms, all techniques effectively established two common North American SAV species, Vallisneria americana and Potamogeton illinoensis . Sediment-added techniques had species-specific benefits, e.g. burritos produced taller Vallisneria leaves, and greater Potamogeton biomass, while peat pots encouraged rapid Vallisneria shoot production. However, no treatment was universally beneficial across all growth metrics. In the field, all techniques were effective at two sites, but at two other sites, no techniques were successful. Results show that under favorable mesocosm and field conditions, all techniques promote establishment; however, subtle differences in technique-driven plant traits (height, density, nutrients) suggest that under specific environmental conditions, some techniques may be more favorable. Also, no technique offers practical advantages in every scenario, but each offers situation-specific advantages. Guidance emerging from this work is that all techniques are potentially effective, but small-scale tests in site-specific restoration scenarios, along with consideration of feasibility constraints, are recommended to inform large-scale plantings.

Aquatic Botany↗

Bioaccumulation of selenium from natural geologic sources in western states and its potential consequences

Ecological impacts of water-quality problems have developed in the western United States resulting from the disposal of seleniferous agricultural wastewater in wetland areas. Overt effects of selenium toxicosis occurred at five areas where deformities of wild aquatic birds were similar to those first observed at Kesterson National Wildlife Refuge in the west-central San Joaquin Valley of California. These areas are: Tulare Lake Bed Area, California, Middle Green River Basin, Utah, Kandrick Reclamation Project Area, Wyoming, Sun River Basin, Montana, and Stillwater Wildlife Management Area, Nevada. Potential for ecological damage is indicated at six more sites in Oregon, Colorado, the Colorado/Kansas border, and South Dakota out of 16 areas in 11 states where biological tissue data were collected. This conclusion is based on the fact that selenium bioaccumulated in bird livers to median levels that had exceeded or were in the range associated with adverse reproductive effects. Selenium concentrations in samples of fish and bird eggs support these conclusions at a majority of these areas. Reason for concern is also given for the lower Colorado River Valley, although this is not exclusively a conclusion from these reconnaissance data. Biogeochemical conditions and the extent of selenium contamination of water, bottom sediment, and biota from which this assessment was made are given here. In a companion paper, the biogeochemical pathway postulated for selenium contamination to take place from natural geologic sources to aquatic wildlife is defined.

Environmental Management↗

Integrating subsistence practice and species distribution modeling: assessing invasive elodea’s potential impact on Native Alaskan subsistence of Chinook salmon and whitefish

Alaska has one of the most rapidly changing climates on earth and is experiencing an accelerated rate of human disturbance, including resource extraction and transportation infrastructure development. Combined, these factors increase the state’s vulnerability to biological invasion, which can have acute negative impacts on ecological integrity and subsistence practices. Of growing concern is the spread of Alaska’s first documented freshwater aquatic invasive plant Elodea spp. (elodea). In this study, we modeled the suitable habitat of elodea using global and state-specific species occurrence records and environmental variables, in concert with an ensemble of model algorithms. Furthermore, we sought to incorporate local subsistence concerns by using Native Alaskan knowledge and available statewide subsistence harvest data to assess the potential threat posed by elodea to Chinook salmon ( Oncorhynchus tshawytscha ) and whitefish ( Coregonus nelsonii ) subsistence. State models were applied to future climate (2040–2059) using five general circulation models best suited for Alaska. Model evaluations indicated that our results had moderate to strong predictability, with area under the receiver-operating characteristic curve values above 0.80 and classification accuracies ranging from 66 to 89 %. State models provided a more robust assessment of elodea habitat suitability. These ensembles revealed different levels of management concern statewide, based on the interaction of fish subsistence patterns, known spawning and rearing sites, and elodea habitat suitability, thus highlighting regions with additional need for targeted monitoring. Our results suggest that this approach can hold great utility for invasion risk assessments and better facilitate the inclusion of local stakeholder concerns in conservation planning and management.

Alaska↗

Water-quality assessment of the lower Illinois River Basin: Environmental setting

The lower Illinois River Basin (LIRB) encompasses 18,000 square miles of central and western Illinois. Historical and recent information from Federal, State, and local agencies describing the physiography, population, land use, soils, climate, geology, streamflow, habitat, ground water, water use, and aquatic biology is summarized to describe the environmental setting of the LIRB. The LIRB is in the Till Plains Section of the Central Lowland physiographic province. The basin is characterized by flat topography, which is dissected by the Illinois River. The drainage pattern of the LIRB has been shaped by many bedrock and glacial geologic processes. Erosion prior to and during Pleistocene time created wide and deep bedrock valleys. The thickest deposits and most major aquifers are in buried bedrock valleys. The Wisconsinan glaciation, which bisects the northern half of the LIRB, affects the distribution and characteristics of glacial deposits in the basin. Agriculture is the largest land use and forested land is the second largest land use in the LIRB. The major urban areas are near Peoria, Springfield, Decatur, and Bloomington-Normal. Soil type and distribution affect the amount of soil erosion, which results in sedimentation of lakes and reservoirs in the basin. Rates of soil erosion of up to 2 percent per year of farmland soil have been measured. Many of the 300 reservoirs, lakes, and wetlands are disappearing because of sedimentation resulting from agriculture activities, levee building, and urbanization. Sedimentation and the destruction of habitat appreciably affect the ecosystem. The Illinois River is a large river-floodplain ecosystem where biological productivity is enhanced by annual flood pulses that advance and retreat over the flood plain and temporarily expand backwater and flood-plain lakes. Ground-water discharge to streams affects the flow and water quality of the streams. The water budget of several subbasins show variability in ground-water contribution from runoff and storage. More than half of the drinking water, including domestic and public-supply use, in the LIRB is from ground water. Fifty-two percent of the public-supply water is from surface water. Ground-water withdrawals mostly are from glacial sand and gravel aquifers. Structural features, such as monoclines, synclines, and anticlines, in the buried bedrock affect the water quality of the aquifers. There are five natural environmental divisions in the LIRB. The Grand Prairie covers most of the northeastern half of the basin, and the Western Forest-Prairie covers most of the southwestern half. Implications of environmental setting for water quality in the LIRB are related primarily to land use. The balanced fish community indicates that the lower Illinois River is affected less from urban and industrial waste than the upper Illinois River. A decrease in dissolved oxygen concentrations and turbidity in the lower reaches of the basin in 1993 have resulted from the recent influx of European zebra mussels to the LIRB. Many factors affect water quality in the LIRB. Bedrock and surface topography, type of glacial material, and land use most directly affect water quality in the basin.

Illinois↗

Causal inference approaches reveal both positive and negative unintended effects of agricultural and urban management practices on instream biological condition

Agricultural and urban management practices (MPs) are primarily designed and implemented to reduce nutrient and sediment concentrations in streams. However, there is growing interest in determining if MPs produce any unintended positive effects, or co-benefits, to instream biological and habitat conditions. Identifying co-benefits is challenging though because of confounding variables (i.e., those that affect both where MPs are applied and stream biota), which can be accounted for in novel causal inference approaches. Here, we used two causal inference approaches, propensity score matching (PSM) and Bayesian network learning (BNL), to identify potential MP co-benefits in the Chesapeake Bay watershed portion of Maryland, USA. Specifically, we examined how MPs may modify instream conditions that impact fish and macroinvertebrate indices of biotic integrity (IBI) and functional and taxonomic endpoints. We found evidence of positive unintended effects of MPs for both benthic macroinvertebrates and fish indicated by higher IBI scores and specific endpoints like the number of scraper macroinvertebrate taxa and lithophilic spawning fish taxa in a subset of regions. However, our results also suggest MPs have negative unintended effects, especially on sensitive benthic macroinvertebrate taxa and key instream habitat and water quality metrics like specific conductivity. Overall, our results suggest MPs offer co-benefits in some regions and catchments with largely degraded conditions but can have negative unintended effects in some regions, especially in catchments with good biological conditions. We suggest the number and types of MPs drove these mixed results and highlight carefully designed MP implementation that incorporates instream biological data at the catchment scale could facilitate co-benefits to instream biological conditions. Our study underscores the need for more research on identifying effects of individual MP types on instream biological and habitat conditions.

Maryland↗

Field screening of water quality, bottom sediment, and biota associated with irrigation drainage, Wind River Indian Reservation, Wyoming, 1992-93

Physical, chemical, and biological data were collected in 1992-93 from irrigation drainage areas and wetlands of the Wind River Federal Irrigation Project, Wind River Indian Reservation, Wyoming. Most samples collected had concentrations of chemical constituents less than the established levels of concern for water, bottom sediment, and biota. In the Little Wind Unit irrigation area, however, selenium and mercury concentrations in water exceeded criteria established by the U.S. Environmental Protection Agency. Six water samples analyzed from the Little Wind Unit in 1993 had selenium concentrations that equaled or exceeded 5 micrograms per liter. Concentrations of mercury in water were 0.1 micrograms per liter or less, except at four sites: one sample collected in 1993 from Sharp Nose Draw (4.9 micrograms per liter) and three samples collected in 1992 from Little Wind Unit and Johnstown Unit (0.2 micrograms per liter). Mercury concentrations in all bottom-sediment samples were less than 0.02 micrograms per liter, except at Sharp Nose Pond where a concentration of 0.02 micrograms per liter was measured. Selenium concentrations in some aquatic vegetation, inverte- brates, fish, bird eggs, and bird livers collected from the Little Wind Unit in 1993 exceeded established levels of concern. At Goose Pond and Sharp Nose Pond, selenium in the livers of five bird samples collected exceeded the 10 micrograms per gram level associated with reproductive failure in aquatic birds. Mercury concentrations in the livers of birds sampled at Sharp Nose Pond also were greater than suggested levels in dietary items for the protection of sensitive species of mammals and birds that regularly consume aquatic organisms.

Open-File Report↗

Reproductive health indicators of fishes from Pennsylvania watersheds: association with chemicals of emerging concern

Fishes were collected at 16 sites within the three major river drainages (Delaware, Susquehanna, and Ohio) of Pennsylvania. Three species were evaluated for biomarkers of estrogenic/antiandrogenic exposure, including plasma vitellogenin and testicular oocytes in male fishes. Smallmouth bass Micropterus dolomieu , white sucker Catostomus commersonii , and redhorse sucker Moxostoma species were collected in the summer, a period of low flow and low reproductive activity. Smallmouth bass were the only species in which testicular oocytes were observed; however, measurable concentrations of plasma vitellogenin were found in male bass and white sucker. The percentage of male bass with testicular oocytes ranged from 10 to 100 %, with the highest prevalence and severity in bass collected in the Susquehanna drainage. The percentage of males with plasma vitellogenin ranged from 0 to 100 % in both bass and sucker. Biological findings were compared with chemical analyses of discrete water samples collected at the time of fish collections. Estrone concentrations correlated with testicular oocytes prevalence and severity and with the percentage of male bass with vitellogenin. No correlations were noted with the percentage of male sucker with vitellogenin and water chemical concentrations. The prevalence and severity of testicular oocytes in bass also correlated with the percent of agricultural land use in the watershed above a site. Two sites within the Susquehanna drainage and one in the Delaware were immediately downstream of wastewater treatment plants to compare results with upstream fish. The percentage of male bass with testicular oocytes was not consistently higher downstream; however, severity did tend to increase downstream.

Pennsylvania↗

Wildlife specimen collection, preservation, and shipment

Specimens are used to provide supporting information leading to the determination of the cause of disease or death in wildlife and for disease monitoring or surveillance. Commonly used specimens for wildlife disease investigations include intact carcasses, tissues from carcasses, euthanized or moribund animals, parasites, ingested food, feces, or environmental samples. Samples from live animals or the environment (e.g., contaminated feed) in the same vicinity as a mortality event also may be helpful. The type of specimen collected is determined by availability of samples and biological objectives. Multiple fresh, intact carcasses from affected species are the most useful in establishing a cause for a mortality event. Submission of entire carcasses allows observation of gross lesions and abnormalities, as well as disease testing of multiple tissues. Samples from live animals may be more appropriate when sick animals cannot be euthanized (e.g., threatened or endangered species) or for research and monitoring projects examining disease or agents circulating in apparently healthy animals or those not exhibiting clinical signs. Samples from live animals may include collections of blood, hair, feathers, feces, or ectoparasites, or samples obtained by swabbing lesions or orifices. Photographs and videos are useful additions for recording field and clinical signs and conveying conditions at the site. Collection of environmental samples (e.g., feces, water, feed, or soil) may be appropriate when animals cannot be captured for sampling or the disease agent may persist in the environment. If lethal collection is considered necessary, biologists should refer to the policies, procedures, and permit requirements of their institution/facility and the agency responsible for species management (U.S. Fish and Wildlife Service or State natural resource agency) prior to use in the field. If threatened or endangered species are found dead, or there is evidence of illegal take, field personal should contact local wildlife law enforcement authorities immediately and prior to handling the carcass. Prior to collecting samples, it is important to determine the capabilities and submission criteria of the laboratory receiving the samples. Some laboratories may specialize in a limited number of tests, be equipped to accept only certain types of tissues (instead of entire carcasses), or specialize in particular species or group of animals (e.g., reptiles, birds, mammals). Diagnostic laboratories have specific requirements regarding preparation, labeling, and shipping of samples. Adherence to these requirements helps ensure the usefulness of any submitted specimens. Although laboratories may vary in the cost and turnaround times for diagnostic tests, some laboratories may be able to prioritize samples and accommodate accelerated time frames if communicated at the time of submission. Keeping a prepacked kit with basic carcass-collection supplies, including a paper copy of the specimen history form (available for download from the Web sites of most diagnostic laboratories), in the office or vehicle will decrease the chances of forgetting an essential item and decrease response time for arriving at an event.

Techniques and Methods↗

Alaska

Alaska is the largest state in the Nation, almost one-fifth the size of the combined lower 48 United States, and is rich in natural capital resources. Alaska is often identified as being on the front lines of climate change since it is warming faster than any other state and faces a myriad of issues associated with a changing climate. The cost of infrastructure damage from a warming climate is projected to be very large, potentially ranging from $110 to $270 million per year, assuming timely repair and maintenance. Although climate change does and will continue to dramatically transform the climate and environment of the Arctic, proactive adaptation in Alaska has the potential to reduce costs associated with these impacts. This includes the dissemination of several tools, such as guidebooks to support adaptation planning, some of which focus on Indigenous communities. While many opportunities exist with a changing climate, economic prospects are not well captured in the literature at this time. As the climate continues to warm, there is likely to be a nearly sea ice-free Arctic during the summer by mid-century. Ocean acidification is an emerging global problem that will intensify with continued carbon dioxide (CO 2 ) emissions and negatively affects organisms. Climate change will likely affect management actions and economic drivers, including fisheries, in complex ways. The use of multiple alternative models to appropriately characterize uncertainty in future fisheries biomass trajectories and harvests could help manage these challenges. As temperature and precipitation increase across the Alaska landscape, physical and biological changes are also occurring throughout Alaska’s terrestrial ecosystems. Degradation of permafrost is expected to continue, with associated impacts to infrastructure, river and stream discharge, water quality, and fish and wildlife habitat. Longer sea ice-free seasons, higher ground temperatures, and relative sea level rise are expected to exacerbate flooding and accelerate erosion in many regions, leading to the loss of terrestrial habitat in the future and in some cases requiring entire communities or portions of communities to relocate to safer terrain. The influence of climate change on human health in Alaska can be traced to three sources: direct exposures, indirect effects, and social or psychological disruption. Each of these will have different manifestations for Alaskans when compared to residents elsewhere in the United States. Climate change exerts indirect effects on human health in Alaska through changes to water, air, and soil and through ecosystem changes affecting disease ecology and food security, especially in rural communities. Alaska’s rural communities are predominantly inhabited by Indigenous peoples who may be disproportionately vulnerable to socioeconomic and environmental change; however, they also have rich cultural traditions of resilience and adaptation. The impacts of climate change will likely affect all aspects of Alaska Native societies, from nutrition, infrastructure, economics, and health consequences to language, education, and the communities themselves. The profound and diverse climate-driven changes in Alaska’s physical environment and ecosystems generate economic impacts through their effects on environmental services. These services include positive benefits directly from ecosystems (for example, food, water, and other resources), as well as services provided directly from the physical environment (for example, temperature moderation, stable ground for supporting infrastructure, and smooth surface for overland transportation). Some of these effects are relatively assured and in some cases are already occurring. Other impacts are highly uncertain, due to their dependence on the structure of global and regional economies and future human alterations to the environment decades into the future, but they could be large. In Alaska, a range of adaptations to changing climate and related environmental conditions are underway and others have been proposed as potential actions, including measures to reduce vulnerability and risk, as well as more systemic institutional transformation.

Report↗