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USGS2018

Molecular and morphometric analyses reveal cryptic diversity within freshwater mussels (Bivalvia: Unionidae) of the western Gulf coastal drainages of the USA

Past geological processes and climate change affected current species distributions and the genetic structure of riverine fauna. Western Gulf of Mexico coastal rivers harbour four mussel species within the genus Fusconaia (Bivalvia: Unionida). The distributions of these species are unclear owing to their indistinguishable shell morphologies. Using molecular phylogenetic and Fourier morphometric analyses, we examined phylogenetic relationships and morphological variation among the species and made inferences about the role of past geological and climatic factors in shaping the current genetic structure and distributions of these species in the region. Our results showed the presence of three Fusconaia species within the region: Fusconaia askewi , Fusconaia chunii and Fusconaia flava . We confirmed that Fusconaia lananensis is a junior synonym of F. askewi and that F. chunii is genetically distinct from F. askewi . The Trinity River has syntopic F. flava whose morphologies are indistinguishable from those of F. chunii . Divergence-time estimates matched major geological and climatic events in the region, where climate-driven river formations during the mid-Miocene to Pleistocene caused major diversification of Fusconaia species. Knowledge gained from the present study provides a better understanding of vicariant events that shaped current species distributions and helps to identify conservation priorities that apply to the Fusconaia species.

Biological Journal of the Linnean Society↗

USGS2014

Survival of Atlantic salmon Salmo salar smolts through a hydropower complex

This study evaluated Atlantic salmon Salmo salar smolt survival through the lower Penobscot River, Maine, U.S.A., and characterized relative differences in proportional use and survival through the main-stem of the river and an alternative migration route, the Stillwater Branch. The work was conducted prior to removal of two main-stem dams and operational changes in hydropower facilities in the Stillwater Branch. Survival and proportional use of migration routes in the lower Penobscot were estimated from multistate (MS) models based on 6 years of acoustic telemetry data from 1669 smolts and 2 years of radio-telemetry data from 190 fish. A small proportion (0·12, 95% c.i. = 0·06–0·25) of smolts used the Stillwater Branch, and mean survival through the two operational dams in this part of the river was relatively high (1·00 and 0·97). Survival at Milford Dam, the dam that will remain in the main-stem of the Penobscot River, was relatively low (0·91), whereas survival through two dams that were removed was relatively high (0·99 and 0·98). Smolt survival could decrease in the Stillwater Branch with the addition of two new powerhouses while continuing to meet fish passage standards. The effects of removing two dams in the main-stem are expected to be negligible for smolt survival based on high survival observed from 2005 to 2012 at those locations. Survival through Milford Dam was been well below current regulatory standards, and thus improvement of passage at this location offers the best opportunity for improving overall smolt survival in the lower river.

Maine↗

USGS2015

Physiological preparedness and performance of Atlantic salmon Salmo salar smolts in relation to behavioural salinity preferences and thresholds

This study investigated the relationships between behavioural responses of Atlantic salmon Salmo salar smolts to saltwater (SW) exposure and physiological characteristics of smolts in laboratory experiments. It concurrently described the behaviour of acoustically tagged smolts with respect to SW and tidal cycles during estuary migration. Salmo salar smolts increased their use of SW relative to fresh water (FW) from April to June in laboratory experiments. Mean preference for SW never exceeded 50% of time in any group. Preference for SW increased throughout the course of smolt development. Maximum continuous time spent in SW was positively related to gill Na + , K + -ATPase (NKA) activity and osmoregulatory performance in full-strength SW (measured as change in gill NKA activity and plasma osmolality). Smolts decreased depth upon reaching areas of the Penobscot Estuary where SW was present, and all fish became more surface oriented during passage from head of tide to the ocean. Acoustically tagged, migrating smolts with low gill NKA activity moved faster in FW reaches of the estuary than those with higher gill NKA activity. There was no difference in movement rate through SW reaches of the estuary based on gill NKA activity. Migrating fish moved with tidal flow during the passage of the lower estuary based on the observed patterns in both vertical and horizontal movements. The results indicate that smolts select low-salinity water during estuary migration and use tidal currents to minimize energetic investment in seaward migration. Seasonal changes in osmoregulatory ability highlight the importance of the timing of stocking and estuary arrival.

Journal of Fish Biology↗

USGS1983

Reclamation of mined lands in the western coal region

In 1978, a group of scientists from several Federal agencies examined reclamation work at 22 coal mines in seven western States. The results of these examinations were not used to derive quantitative predictions of the outcome of reclamation work but rather to determine the general requirements for revegetation success. Locally, reclamation efforts are affected by climate, especially precipitation; the landform of the restored surface; the nature of the overburden material; the nature of the surface soil; and the natural ecological system. The goals of reclamation efforts are now broader than ever. Regulations call not only for reducing the steepness of the final surface and establishing a cover of mostly perennial native vegetation, but for restoring the land for specific land uses, achieving diversity both in types of plants and in number of species, and reintroduction of biological and ecological processes. If specific sites are monitored over a long enough period of time, quantitative predictions of success for individual mines may be possible, and such predictions can be included in environmental impact statements to help in the decision-making process. The results of this study indicate that current reclamation objectives can be met when the reclamation effort is designed on the basis of site-specific needs and when existing technology is used.

Circular↗

USGS2015

Chemical mixtures and environmental effects: a pilot study to assess ecological exposure and effects in streams

Assessment and management of the risks of exposure to complex chemical mixtures in streams are priorities for human and environmental health organizations around the world. The current lack of information on the composition and variability of environmental mixtures and a limited understanding of their combined effects are fundamental obstacles to timely identification and prevention of adverse human and ecological effects of exposure. This report describes the design of a field-based study of the composition and biological activity of chemical mixtures in U.S. stream waters affected by a wide range of human activities and contaminant sources. The study is a collaborative effort by the U.S. Geological Survey and the U.S. Environmental Protection Agency. Scientists sampled 38 streams spanning 24 States and Puerto Rico. Thirty-four of the sites were located in watersheds impacted by multiple contaminant sources, including industrial and municipal wastewater discharges, crop and animal agricultural runoff, urban runoff, and other point and nonpoint contaminant sources. The remaining four sites were minimally development reference watersheds. All samples underwent comprehensive chemical and biological characterization, including sensitive and specific direct analysis for over 700 dissolved organic and inorganic chemicals and field parameters, identification of unknown contaminants (environmental diagnostics), and a variety of bioassays to evaluate biological activity and toxicity.

Open-File Report↗

USGS1983

Assessment of gray whale feeding grounds and sea floor interaction in the northeastern Bering Sea

A dense ampeliscid amphipod community in Chirikov Basin and around St. Lawrence Island in the northeastern Bering Sea has been outlined by summarizing biological studies, analyzing bioturbation in sediment samples, and examining sea floor photos and videotapes. The amphipod population is associated with a homogeneous, relict fine-grained sand body 0.10-1.5 m thick that is deposited during the marine transgression over the Bering land bridge 8,000-10,000 yr B.P. Modern current and water mass movements and perhaps whale feeding activity prevent modern deposition in this area. The distribution of the transgressive sand sheet, associated amphipod community and feeding gray whales mapped by aerial survey correlate closely with three types of sea-floor pits observed on high (500 kHz) and low (105 kHz) resolution side-scan sonar; they are attributed to gray whale feeding traces and their subsequent current scour modification. The fresh and modified feeding pits are present in 22,000 km2 of the basin and they cover a total of 2 to 18% of the sea floor in different areas of the feeding region. The smallest size class of pits approximates whale mouth gape size and is assumed to represent fresh whale feeding pits. Fresh feeding disturbance of the sea floor is estimated to average about 5.7% for a full feeding season. Combined with information that 34% of the measured benthic biomass is amphipod prey species, and calculating the number of gray whale feeding days in the Alaskan waters plus amount consumed per day, it can be estimated that Chirikov Basin, 2% of the feeding area, supplies a minimum of 5.3 to 7.1% of the gray whale's food resource in the Bering Sea and Arctic Ocean. If a maximum of 50% of the fresh feeding features are assumed to be missed because they parallel side-scan beam paths, then a maximum whale food resource of 14.2% is possible in northeastern Bering Sea. Because of side-scan techniques and possible higher amphipod biomass estimates, a reasonable minimum estimate of the total whale food resource in northeastern Bering Sea is 10%. These data show that side-scan sonar is a powerful new technique for analyzing marine mammal benthic feeding grounds. Sonographs reveal that the gray whales profoundly disturb the substrate and initiate substantial further erosion by bottom currents, all of which enhances productivity of the prey species and results in a 'farming of the sea floor'. In turn, because of the high concentration of whale prey species in a prime feeding ground that is vulnerable to the development of petroleum and mining for sand, great care is required in the exploitation of these resources in the Chirikov Basin.

Open-File Report↗

USGS1997

Effects of climate change on freshwater ecosystems of the south-eastern United States and the Gulf Coast of Mexico

The south-eastern United States and Gulf Coast of Mexico is physiographically diverse, although dominated by a broad coastal plain. Much of the region has a humid, warm temperate climate with little seasonality in precipitation but strong seasonality in runoff owing to high rates of summer evapotranspiration. The climate of southern Florida and eastern Mexico is subtropical with a distinct summer wet season and winter dry season. Regional climate models suggest that climate change resulting from a doubling of the pre-industrial levels of atmospheric CO2 may increase annual air temperatures by 3-4??C. Changes in precipitation are highly uncertain, but the most probable scenario shows higher levels over all but the northern, interior portions of the region, with increases primarily occurring in summer and occurring as more intense or clustered storms. Despite the increases in precipitation, runoff is likely to decline over much of the region owing to increases in evapotranspiration exceeding increases in precipitation. Only in Florida and the Gulf Coast areas of the US and Mexico are precipitation increases likely to exceed evapotranspiration increases, producing an increase in runoff. However, increases in storm intensity and clustering are likely to result in more extreme hydrographs, with larger peaks in flow but lower baseflows and longer periods of drought. The ecological effects of climate change on freshwaters of the region include: (1) a general increase in rates of primary production, organic matter decomposition and nutrient cycling as a result of higher temperatures and longer growing seasons: (2) reduction in habitat for cool water species, particularly fish and macroinvertebrates in Appalachian streams; (3) reduction in water quality and in suitable habitat in summer owing to lower baseflows and intensification of the temperature-dissolved oxygen squeeze in many rivers and reservoirs; (4) reduction in organic matter storage and loss of organisms during more intense flushing events in some streams and wetlands; (5) shorter periods of inundation of riparian wetlands and greater drying of wetland soils, particularly in northern and inland areas; (6) expansion of subtropical species northwards, including several non-native nuisance species currently confined to southern Florida; (7) expansion of wetlands in Florida and coastal Mexico, but increase in eutrophication of Florida lakes as a result of greater runoff from urban and agricultural areas; and (8) changes in the flushing rate of estuaries that would alter their salinity regimes, stratification and water quality as well as influence productivity in the Gulf of Mexico. Many of the expected climate change effects will exacerbate current anthropogenic stresses on the region's freshwater systems, including increasing demands for water, increasing waste heat loadings and land use changes that alter the quantity and quality of runoff to streams and reservoirs. Research is needed especially in several critical areas: long-term monitoring of key hydrological, chemical and biological properties (particularly water balances in small, forested catchments and temperature-sensitive species); experimental studies of the effects of warming on organisms and ecosystem processes under realistic conditions (e.g. in situ heating experiments); studies of the effects of natural hydrological variation on biological communities; and assessment of the effects of water management activities on organisms and ecosystem processes, including development and testing of management and restoration strategies designed to counteract changes in climate.

Hydrological Processes↗

USGS2001

Relations among geology, physiography, land use, and stream habitat conditions in the Buffalo and Current River systems, Missouri and Arkansas

This study investigated links between drainage-basin characteristics and stream habitat conditions in the Buffalo National River, Arkansas and the Ozark National Scenic Riverways, Missouri. It was designed as an associative study - the two parks were divided into their principle tributary drainage basins and then basin-scale and stream-habitat data sets were gathered and compared between them. Analyses explored the relative influence of different drainage-basin characteristics on stream habitat conditions. They also investigated whether a relation between land use and stream characteristics could be detected after accounting for geologic and physiographic differences among drainage basins. Data were collected for three spatial scales: tributary drainage basins, tributary stream reaches, and main-stem river segments of the Current and Buffalo Rivers. Tributary drainage-basin characteristics were inventoried using a Geographic Information System (GIS) and included aspects of drainage-basin physiography, geology, and land use. Reach-scale habitat surveys measured channel longitudinal and cross-sectional geometry, substrate particle size and embeddedness, and indicators of channel stability. Segment-scale aerial-photo based inventories measured gravel-bar area, an indicator of coarse sediment load, along main-stem rivers. Relations within and among data sets from each spatial scale were investigated using correlation analysis and multiple linear regression. Study basins encompassed physiographically distinct regions of the Ozarks. The Buffalo River system drains parts of the sandstone-dominated Boston Mountains and of the carbonate-dominated Springfield and Salem Plateaus. The Current River system is within the Salem Plateau. Analyses of drainage-basin variables highlighted the importance of these physiographic differences and demonstrated links among geology, physiography, and land-use patterns. Buffalo River tributaries have greater relief, steeper slopes, and more streamside bluffs than the Current River tributaries. Land use patterns in both river systems correlate with physiography - cleared land area is negatively associated with drainage-basin average slope. Both river systems are dominantly forested (0-35 per-cent cleared land), however, the potential for landscape disturbance may be greater in the Buffalo River system where a larger proportion of cleared land occurs on steep slopes (>15 degrees). When all drainage basins are grouped together, reach-scale channel characteristics show the strongest relations with drainage-basin physiography. Bankfull channel geometry and residual pool dimensions are positively correlated with drainage area and topographic relief variables. After accounting for differences in drainage area, channel dimensions in Buffalo River tributaries tend to be larger than in Current River tributaries. This trend is consistent with the flashy runoff and large storm flows that can be generated in rugged, sandstone-dominate terrain. Substrate particle size is also most strongly associated with physiography; particle size is positively correlated with topographic relief variables. When tributaries are subset by river system, relations with geology and land use variables become apparent. Buffalo River tributaries with larger proportions of carbonate bedrock and cleared land area have shallower channels, better-sorted, gravel-rich substrate, and more eroding banks than those with little cleared land and abundant sandstone bedrock. Gravel-bar area on the Buffalo River main stem was also larger within 1-km of carbonate-rich tributary junctions. Because geology and cleared land are themselves correlated, relations with anthropogenic and natural factors could often not be separated. Channel characteristics in the Current River system show stronger associations with physiography than with land use. Channels are shallower and have finer substrates in the less rugged, karst-rich, western basins than in the

Arkansas, Missouri↗

USGS2025

How accurately does eDNA reflect the spatial distribution of cold-water fish? Field validation from a temperate lake

Applications of environmental DNA (eDNA) based detection technology to evaluate the distribution of aquatic organisms are increasing; yet field validations of eDNA are important to measure accuracy in study systems. To successfully apply this technology to species conservation, it is critical to understand how both species biology and environmental conditions affect the accuracy of inference from eDNA detection data. We implemented a field assessment of the accuracy and spatial resolution of eDNA-based species distributions for a native cold-water, schooling fish, cisco Coregonus artedi , that has been reintroduced to a deep temperate lake. We leveraged a combination of acoustic telemetry, providing known spatial locations of tagged fish, and lake-wide eDNA sampling to infer their distribution in Keuka Lake, New York, USA. Sub-surface (12 m and 18 m depths) eDNA samples were collected to accommodate the diel vertical migration behaviour of this fish species. The results of this study validated the accuracy of positive eDNA detections with the distribution of tagged fish to coarse spatial scales. Yet, several fine-scale locations revealed a mismatch between eDNA and acoustic telemetry detections; consistent with rapid transport of genetic material via lake currents. Empirical measurements of lake currents using drifters found cisco eDNA detections could deviate from specimens' source locations by as much as 3.3 km at 12 m depth or 1.5 km at 18 m depth over a 24 h transport period. Our study indicates that accurate species distributions estimated from eDNA sampling in lakes may require further understanding of transport mechanisms and persistence of environmental genetic material to relate point detections to source animal locations. Integrating eDNA sampling with additional data collection of species biology and environmental conditions will increase the spatial resolution of fish distribution assessments.

New York↗

USGS2011

Biology, status, and management of the yellowstone cutthroat trout

Yellowstone cutthroat trout Oncorhynchus clarkii bouvieri were historically distributed in the Yellowstone River drainage (Montana and Wyoming) and the Snake River drainage (Wyoming, Idaho, Utah, Nevada, and probably Washington). Individual populations evolved distinct life history characteristics in response to the diverse environments in which they were isolated after the last glaciation. Anthropogenic activities have resulted in a substantial decline (42% of the historical range is currently occupied; 28% is occupied by core [genetically unaltered] populations), but the number of extant populations, especially in headwater streams, has precluded listing of this taxon under the Endangered Species Act. Primary threats to persistence of Yellowstone cutthroat trout include (1) invasive species, resulting in hybridization, predation, disease, and interspecific competition; (2) habitat degradation from human activities such as agricultural practices, water diversions, grazing, dam construction, mineral extraction, grazing, timber harvest, and road construction; and (3) climate change, including an escalating risk of drought, wildfire, winter flooding, and rising temperatures. Extirpation of individual populations or assemblages has led to increasing isolation and fragmentation of remaining groups, which in turn raises susceptibility to the demographic influences of disturbance (both human and stochastic) and genetic factors. Primary conservation strategies include (1) preventing risks associated with invasive species by isolating populations of Yellowstone cutthroat trout and (2) connecting occupied habitats (where possible) to preserve metapopulation function and the expression of multiple life histories. Because persistence of isolated populations may be greater in the short term, current management is focused on isolating individual populations and restoring habitats; however, this approach implies that humans will act as dispersal agents if a population is extirpated because of stochastic events.

Idaho, Montana, Utah, Wyoming↗

USGS2021

The role of neutral and adaptive genomic variation in population diversification and speciation in two ground squirrel species of conservation concern

Understanding the neutral (demographic) and adaptive processes leading to the differentiation of species and populations is a critical component of evolutionary and conservation biology. In this context, recently diverged taxa represent a unique opportunity to study the process of genetic differentiation. Northern and southern Idaho ground squirrels ( Urocitellus brunneus —NIDGS, and U . endemicus —SIDGS, respectively) are a recently diverged pair of sister species that have undergone dramatic declines in the last 50 years and are currently found in metapopulations across restricted spatial areas with distinct environmental pressures. Here we genotyped single-nucleotide polymorphisms (SNPs) from buccal swabs with restriction site-associated DNA sequencing (RADseq). With these data we evaluated neutral genetic structure at both the inter- and intraspecific level, and identified putatively adaptive SNPs using population structure outlier detection and genotype–environment association (GEA) analyses. At the interspecific level, we detected a clear separation between NIDGS and SIDGS, and evidence for adaptive differentiation putatively linked to torpor patterns. At the intraspecific level, we found evidence of both neutral and adaptive differentiation. For NIDGS, elevation appears to be the main driver of adaptive differentiation, while neutral variation patterns match and expand information on the low connectivity between some populations identified in previous studies using microsatellite markers. For SIDGS, neutral substructure generally reflected natural geographical barriers, while adaptive variation reflected differences in land cover and temperature, as well as elevation. These results clearly highlight the roles of neutral and adaptive processes for understanding the complexity of the processes leading to species and population differentiation, which can have important conservation implications in susceptible and threatened species.

Idaho↗

USGS2014

North American amphibians: Distribution and diversity

Some 300 species of amphibians inhabit North America. The past two decades have seen an enormous growth in interest about amphibians and an increased intensity of scientific research into their fascinating biology and continent-wide distribution. This atlas presents the spectacular diversity of North American amphibians in a geographic context. It covers all formally recognized amphibian species found in the United States and Canada, many of which are endangered or threatened with extinction. Illustrated with maps and photos, the species accounts provide current information about distribution, habitat, and conservation. Researchers, professional herpetologists, and anyone intrigued by amphibians will value North American Amphibians as a guide and reference.

Book↗

USGS2007

Genetic studies of freshwater turtle and tortoises: a review of the past 70 years

Powerful molecular techniques have been developed over many decades for resolving genetic relationships, population genetic structure, patterns of gene flow, mating systems, and the amount of genetic diversity in animals. Genetic studies of turtles were among the earliest and the rapid application of new genetic tools and analytical techniques is still apparent in the literature on turtles. At present, of the 198 freshwater turtles and tortoises that are listed as not extinct by the IUCN Red List, 69 species worldwide are listed as endangered or critically endangered, and an additional 56 species are listed as vulnerable. Of the ca. 300 species of the freshwater turtles and tortoises in the world, ca. 42% are considered to be facing a high risk extinction, and there is a need to focus intense conservation attention on these species. This includes a need to (i) assess our current state of knowledge regarding the application of genetics to studies of freshwater turtles and tortoises and (ii) determine future research directions. Here, we review all available published studies for the past 70 years that were written in English and used genetic markers (e.g. karyotypes, allozymes, DNA loci) to better understand the biology of freshwater turtles and tortoises. We review the types of studies conducted in relation to the species studied and quantify the countries where the studies were performed. We rack the changing use of different genetic markers through time and report on studies focused on aspects of molecular evolution within turtle genomes. We address the usefulness of particular genetic markers to answer phylogenetic questions and present data comparing population genetic structure and mating systems across species. We draw specific attention to whether authors have considered issues to turtle conservation in their research or provided new insights that have been translated into recommendations for conservation management.

Conference Paper↗

USGS2016

Hanson Russian River Ponds floodplain restoration: Feasibility study and conceptual design; Appendix G: Physical evaluation of the restoration alternatives

Appendix G: Hanson Russian River Ponds Floodplain Restoration: Feasibility Study and Conceptual Design |G-1Appendix GPhysical Evaluation of the Restoration AlternativesRichard McDonald and Jonathan Nelson, PhDU.S. Geological Survey Geomorphology and Sediment Transport Laboratory, Golden, ColoradoIntroductionTo assess the relative and overall impacts of the scenarios proposed in Chapters 7 and 9,(Stage I-A–I-D and Stage II-A –II-E), each of the topographic configurations were evaluated over a range of flows. Thisevaluation was carried out using computational flow modeling tools available in the iRIC public-domain river modeling interface (www.i-ric.org, Nelsonet al.in press). Using the iRIC modeling tools described in more detail below, basic hydraulic computations of water-surface elevation, velocity, shear stress, and other hydraulic variables were carried out for the alternatives in the reach surrounding the project area, from the confluence of Dry Creek upstream to the Wohler road bridge downstream, for the full range of observed flows. This methodology allows comparison of the current channel configuration with the proposed alternatives in terms of inundation period and frequency, depth, water velocity, and other hydraulic information. By integrating this kind of information over the reach of interest and the flow record, critical metrics assessing the impacts of various topographic modifications can be compared to those same metrics for the existing condition or other modification scenarios. In addition, because the iRIC tools include predictions of sediment mobility, suspension of fines, and the potential evolution of the land surface in response to flow, these methods provide evaluation of sediment transport, stability of current and proposed surfaces, and evaluation of how these surfaces might evolve into the future. This hydraulic and sediment transport information is critically important for understanding theimpacts of various proposed alternatives on the physical system; perhaps even more importantly given the objectives of the proposed restoration, this information can be related to biological impacts, as is discussed in subsequent chapters of this document.

Book chapter↗

USGS2021

A bright spot analysis of inland recreational fisheries in the face of climate change: Learning about adaptation from small successes

Inland recreational fisheries have social, economic, and ecological importance worldwide but these fisheries are increasingly challenged by the diverse effects of climate change. Coupled with other anthropogenic stressors, climate change has contributed to declines in freshwater biodiversity of greater severity than those observed across marine or terrestrial taxa. At a macro level, inland fisheries are experiencing declines. There are, however, a number of success stories, or ‘bright spots,’ in inland recreational fisheries management, where innovative approaches are leading to increases in social and ecological well-being in the face of climate change. Cases such as these are important sources of inspiration and learning about adaptation to climate and environmental change. In this article, we analyze 11 examples of such ‘bright spots’ drawn from multiple jurisdictions around the world from which we extracted lessons that might apply to fisheries management challenges beyond the region and context of each case. Collectively, these bright spots highlight adaptive initiatives that allow for recreational fisheries management to mitigate to stressors associated with current and future climate change. Examples identified include community-based restoration projects, collaborative and adaptive approaches to short-term fisheries closures, transdisciplinary large-scale conservation projects, and conservation-minded efforts by individuals and communities. By highlighting examples of ‘small wins’ within inland recreational fisheries management, this review contributes to the idea that a ‘positive future’ for inland recreational fisheries in the face of climate change is possible and highlights potential strategies to adapt to current and future climate scenarios.

Reviews in Fish Biology and Fisheries↗

USGS1998

Analysis of the influence of spatial pattern in habitat selection studies

Design and analysis of wildlife habitat selection studies typically do not assess the effect of spatial pattern on the habitat selection process. Effects of landscape scale pattern on habitat selection cannot be accomplished without replicate study areas, because pattern is a single, albeit multifaceted, attribute of an area. For a single area, however, the influence of pattern-related characteristics, such as shape and edge shared with adjacent patches, can be estimated by using GLIM (McCullough and Neider 1983) procedures to model patch-specific frequency counts of animal use as a function of these parameters. This approach is evaluated and illustrated with simulated breeding-bird counts in a South Carolina study area for which a GIS land cover classification is available. A related technique for evaluating whether movement from patch to patch is selective is developed and illustrated for designs that involve collection of trajectory data from monitored individuals. These designs and analyses are feasible given current GIS and GPS technology. Statistical inferences from habitat selection studies should be interpreted within the context of a range of scales at which animals differentiate between patch attributes.

Journal of Agricultural, Biological, and Environme↗

USGS2017

Assessing the potential of translocating vulnerable forest birds by searching for novel and enduring climatic ranges

Hawaiian forest birds are imperiled, with fewer than half the original >40 species remaining extant. Recent studies document ongoing rapid population decline and pro- ject complete climate-based range losses for the critically endangered Kaua’i endemics ‘akeke’e (Loxops caeruleirostris) and ‘akikiki (Oreomystis bairdi) by end-of-century due to projected warming. Climate change facilitates the upward expansion of avian malaria into native high elevation forests where disease was historically absent. While intensi- fied conservation efforts attempt to safeguard these species and their habitats, the magnitude of potential loss and the urgency of this situation require all conservation options to be seriously considered. One option for Kaua’i endemics is translocation to islands with higher elevation habitats. We explored the feasibility of interisland translocation by projecting baseline and future climate-based ranges of ‘akeke’e and ‘akikiki across the Hawaiian archipelago. For islands where compatible climates for these spe- cies were projected to endure through end-of-century, an additional climatic niche overlap analysis compares the spatial overlap between Kaua’i endemics and current native species on prospective destination islands. Suitable climate-based ranges exist on Maui and Hawai’i for these Kaua’i endemics that offer climatically distinct areas compared to niche distributions of destination island endemics. While we recognize that any decision to translocate birds will include assessing numerous additional social, political, and biological factors, our focus on locations of enduring and ecologically compatible climate-based ranges represents the first step to evaluate this potential conservation option. Our approach considering baseline and future distributions of species with climatic niche overlap metrics to identify undesirable range overlap provides a method that can be utilized for other climate-vulnerable species with disjointed compatible environments beyond their native range.

Hawaii↗

USGS2019

Deer do not affect short-term rates of vegetation recovery in overwash fans on Fire Island after Hurricane Sandy

1. Coastal resilience is threatened as storm-induced disturbances become more frequent and intense with anticipated changes in weather patterns. After severe storms, rapid recovery of vegetation, especially that of dune-stabilizing plants, is a fundamental property of coastal resilience. Herbivores may affect resilience by selectively foraging palatable plant species in disturbed areas. Knowledge of herbivore impacts to dune recovery after storm events is crucial to management of coastal properties. 2. We combined imagery classification, wildlife monitoring, and trend analysis to investigate effects of white-tailed deer on recovery rates of vegetation over four years post-storm in nine areas overwashed. We estimated local deer density with trail cameras, coupled deer density with primary productivity, and assessed the relationship between deer density and rates of vegetation recovery in overwash fans. 3. Pre-storm vegetation cover consisted of shrubs and sporadic patches of beachgrass. Post-storm cover was dominated by beachgrass. At current recovery rates, vegetation coverage will return to pre-storm conditions within the decade, though community transition from grasses to shrubs will take longer and will vary by site with the rate of dune formation. 4. The effect of deer on rates of vegetation recovery was negative, but not statistically significant nor biologically compelling. Although effects of trampling are evident in classified imagery, deer foraging on beachgrass had little effect on rates of spread throughout overwash fans. 5. Our research provides perhaps the first assessment of the effects of deer on post-storm vegetation recovery. While the rate of spread of the primary dune-building plant species was not deleteriously affected by deer, locally high deer densities will likely affect the establishment and development of more palatable herbs and shrubs.

New York↗