USGS Science⌕ Search

SEARCH · USGS Science

Results for “Environment”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 541 records · Page 30Linked to original sources
USGS2016

Modeling martian thermal inertia in a distributed memory high performance computing environment

Modeling martian surface properties fusing high resolution, spatially enabled, remotely sensed data and derived thermophysical modeling is an essential tool for surface property characterization studies. In this work, we describe the development of a thermal inertia modeling tool that integrates the KRC thermal model and a nine-dimensional parameter interpolation with inputs draw from remotely sensed data. Our model is classifiable as operating in both the Big Data and Big Process domains. We utilize the KRC thermal model to generate a dense lookup table. We show that the overall size of the lookup table necessary to derive thermal inertia can be reduced, through sampling, by approximately 82% while maintaining a high level of accuracy at those regions of the parameter space where thermal inertia is most frequently derived. This level of data reduction supports the distributed, in-memory application of our model and we illustrate the computational performance through a classic scaling experiment. This work extends previous modeling efforts by allowing for pixel scale thermal inertia modeling at the highest spatial scales allowed, and enabling surface properties investigations at spatial scales relevant to addressing high-priority science and engineering questions.

Conference Paper↗
USGS2022

Constructing a large-scale landslide database across heterogeneous environments using task-specific model updates

Preparation and mitigation efforts for widespread landslide hazards can be aided by a large-scale, well-labeled landslide inventory with high location accuracy. Recent smallscale studies for pixel-wise labeling of potential landslide areas in remotely-sensed images using deep learning (DL) showed potential but were based on data from very small, homogeneous regions with unproven model transferability. In this paper we consider a more realistic and practical setting for large-scale heterogeneous landslide data collection and DL-based labeling. In this setting, remotely sensed images are collected sequentially in temporal batches, where each batch focuses on images from a particular ecoregion, but different batches can focus on different ecoregions with distinct landscape characteristics. For such a scenario, we study the following questions: (1) How well do DL models trained in homogeneous regions perform when they are transferred to different ecoregions, (2) Does increasing the spatial coverage in the data improve model performance in a given ecoregion (even when the extra data do not come from the ecoregion), and (3) Can a landslide pixel labeling model be incrementally updated with new data, but without access to the old data and without losing performance on the old data (so that researchers can share models obtained from proprietary datasets)' We address these questions by extending the Learning without Forgetting framework, which is used for incremental training of image classification models, to the setting of incremental training of semantic segmentation models (e.g., identifying all landslide pixels in an image). We call the resulting extension Task-Specific Model Updates (TSMU). TSMU semantic segmentation framework consists of an encoder shared by all ecoregions to capture the similarities between them, and ecoregion-specific decoders to capture the nuances of each ecoregion. This framework is continually updated using a threestage training procedure for each new addition of an ecoregion without having to revisit data from old ecoregions and without losing performance on them.

IEEE Journal of Selected Topics in Applied Earth O↗
USGS2014

Patterns of lake occupancy by fish indicate different adaptations to life in a harsh Arctic environment

Summary For six fish species sampled from 86 lakes on the Arctic Coastal Plain, Alaska, we examined whether lake occupancy was related to variables representing lake size, colonisation potential and/or the presence of overwintering habitat. We found the relative importance of each factor for a given species could be related to its ecology and adult size. The three large-bodied migratory species, least cisco ( Coregonus sardinella ), broad whitefish ( Coregonus nasus ) and arctic grayling ( Thymallus arcticus ), were influenced by factors associated with the likelihood of fish recolonising lakes, including whether the lakes had a stream connection. Of the large-bodied species, least cisco had the highest likelihood of occupancy (0.52 ± 0.05) and models provided evidence that least cisco exhibit both migratory and resident forms. Models for small-bodied fish differed among species, indicating different niches. Ninespine stickleback ( Pungitius pungitius ) were the most widespread and ubiquitous of the species captured (occupancy probability = 0.97 ± 0.01); they were captured in lakes that freeze to the bottom, suggesting that they disperse widely and rapidly after the spring freshet, including colonisation of sink habitats. Alaska blackfish ( Dallia pectoralis ) had a lower occupancy (occupancy probability = 0.76 ± 0.05) with a distribution that reflected tolerance to harsh conditions. Slimy sculpin ( Cottus cognatus ) had an occupancy probability of 0.23 ± 0.06, with a distribution indicating its marine origin. Based on these patterns, we propose an overall model of primary controls on the distribution of fish on the Arctic Coastal Plain of Alaska. Harsh conditions, including lake freezing, limit occupancy in winter through extinction events while lake occupancy in spring and summer is driven by directional migration (large-bodied species) and undirected dispersal (small-bodied species).

Alaska↗
USGS2020

Climate and local environment structure asynchrony and the stability of primary production in grasslands

Aim Climate variability threatens to destabilize production in many ecosystems. Asynchronous species dynamics may buffer against such variability when a decrease in performance by some species is offset by an increase in performance of others. However, high climatic variability can eliminate species through stochastic extinctions or cause similar stress responses among species that reduce buffering. Local conditions, such as soil nutrients, can also alter production stability directly or by influencing asynchrony. We test these hypotheses using a globally distributed sampling experiment. Location Grasslands in North America, Europe and Australia. Time period Annual surveys over 5 year intervals occurring between 2007 and 2014. Major taxa studied Herbaceous plants. Methods We sampled annually the per species cover and aboveground community biomass [net primary productivity (NPP)], plus soil chemical properties, in 29 grasslands. We tested how soil conditions, combined with variability in precipitation and temperature, affect species richness, asynchrony and temporal stability of primary productivity. We used bivariate relationships and structural equation modelling to examine proximate and ultimate relationships. Results Climate variability strongly predicted asynchrony, whereas NPP stability was more related to soil conditions. Species richness was structured by both climate variability and soils and, in turn, increased asynchrony. Variability in temperature and precipitation caused a unimodal asynchrony response, with asynchrony being lowest at low and high climate variability. Climate impacted stability indirectly, through its effect on asynchrony, with stability increasing at higher asynchrony owing to lower inter‐annual variability in NPP. Soil conditions had no detectable effect on asynchrony but increased stability by increasing the mean NPP, especially when soil organic matter was high. Main conclusions We found globally consistent evidence that climate modulates species asynchrony but that the direct effect on stability is low relative to local soil conditions. Nonetheless, our observed unimodal responses to variability in temperature and precipitation suggest asynchrony thresholds, beyond which there are detectable destabilizing impacts of climate on primary productivity.

Global Ecology and Biogeography↗
USGS2004

Use of a latitudinal gradient in bald cypress (Taxodium distichum) production to examine physiological controls of biotic boundaries and potential responses to environment change

Aim: Predictions of vegetation change with global warming require models that accurately reflect physiological processes underlying growth limitations and species distributions. However, information about environmental controls on physiology and consequent effects on species boundaries and ecosystem functions such as production is limited, especially for forested wetlands that are potentially important carbon sinks. Location: The bald cypress (Taxodium distichum) region of the south-eastern United States was studied to examine how production of an important forested wetland varies with latitude and temperature as well as local hydrology. Methods: We used published data to analyse litter production across a latitudinal gradient from 26.2 to 37.8?? N to determine how bald cypress swamps might respond to alternate climate conditions and what changes might occur throughout the distributional range. Results: Litterfall rates followed a bell shaped curve, indicating that production was more limited at the distributional boundaries (c. 225 g/m2 year-1) compared to the mid-range (795-1126 g/m2 year-1). This pattern suggests that conditions are sub-optimal near both boundaries and that the absence of populations outside this latitudinal range may be largely due to physiological constraints on the carbon balance of dominant species. While dispersal limitations cannot be totally discounted, competition with other wetland types at the extremes of the range does not seem likely to be important because the relative basal area of bald cypress does not decrease near the edges of the range. Impaired hydrology depressed production across the entire range, but more in the south than the north. Main conclusions: Our findings suggest that (1) physiological limitations constrain biotic boundaries of bald cypress swamps; (2) future changes in global temperature would affect litter production in a nonlinear manner across the distributional range; (3) local changes in hydrology may interact with climate to further reduce litter production, particularly at lower latitudes; and (4) southernmost forests could be extirpated if environmental conditions compromise carbon balance and water-use efficiency of trees. ?? 2004 Blackwell Publishing Ltd.

Global Ecology and Biogeography↗
USGS2005

Chemical and isotopic methods for quantifying ground-water recharge in a regional, semiarid environment

The High Plains aquifer underlying the semiarid Southern High Plains of Texas and New Mexico, USA was used to illustrate solute and isotopic methods for evaluating recharge fluxes, runoff, and spatial and temporal distribution of recharge. The chloride mass-balance method can provide, under certain conditions, a time-integrated technique for evaluation of recharge flux to regional aquifers that is independent of physical parameters. Applying this method to the High Plains aquifer of the Southern High Plains suggests that recharge flux is approximately 2% of precipitation, or approximately 11 ± 2 mm/y, consistent with previous estimates based on a variety of physically based measurements. The method is useful because long-term average precipitation and chloride concentrations in rain and ground water have less uncertainty and are generally less expensive to acquire than physically based parameters commonly used in analyzing recharge. Spatial and temporal distribution of recharge was evaluated by use of δ 2 H, δ 18 O, and tritium concentrations in both ground water and the unsaturated zone. Analyses suggest that nearly half of the recharge to the Southern High Plains occurs as piston flow through playa basin floors that occupy approximately 6% of the area, and that macropore recharge may be important in the remaining recharge. Tritium and chloride concentrations in the unsaturated zone were used in a new equation developed to quantify runoff. Using this equation and data from a representative basin, runoff was found to be 24 ± 3 mm/y; that is in close agreement with values obtained from water-balance measurements on experimental watersheds in the area. Such geochemical estimates are possible because tritium is used to calculate a recharge flux that is independent of precipitation and runoff, whereas recharge flux based on chloride concentration in the unsaturated zone is dependent upon the amount of runoff. The difference between these two estimates yields the amount of runoff to the basin.

Groundwater↗
USGS2007

Use of stage data to characterize hydrologic conditions in an urbanizing environment

This paper presents the results of a study on the use of continuous stage data to describe the relation between urban development and three aspects of hydrologic condition that are thought to influence stream ecosystems - overall stage variability, stream flashiness, and the duration of extreme- stage conditions . This relation is examined using data from more than 70 watersheds in three contrasting environmental settings - the humid Northeast (the metropolitan Boston, Massachusetts, area); the very humid Southeast (the metropolitan Birmingham, Alabama, area); and the semiarid West (the metropolitan Salt Lake City, Utah, area). Results from the Birmingham and Boston studies provide evidence linking increased urbanization with stream flashiness. Fragmentation of developed land cover patches appears to ameliorate the effects of urbanization on overall variability and flashiness. There was less success in relating urbanization and streamflow conditions in the Salt Lake City study. A related investigation of six North Carolina sites with long term discharge and stage data indicated that hydrologic condition metrics developed using continuous stage data are comparable to flow based metrics, particularly for stream flashiness measures.

Journal of the American Water Resources Associatio↗
USGS2024

Biological soil crusts are more prevalent in warmer and drier environments within the Great Basin ecoregion: Implications for managing annual grass invasion

Biological soil crusts (biocrusts) can thrive under environmental conditions that are stressful for vascular plants such as high temperatures and/or extremely low moisture availability. In these settings, and in the absence of disturbance, cover of biocrusts commonly exceeds cover of vascular plants. Arid landscapes are also typically slow to recover from disturbance and prone to altered vegetation and invasion by exotic species. In the sagebrush ecosystems, cover of annual, exotic, invasive grasses are lower where cover of biocrusts and vascular plants are greater, suggesting that biocrusts play a role in helping arid sites avoid conversion to dominance by invasive grasses. The conceptual framework for assessing ecological resistance and resilience (R&R) is used across the region to estimate the risk of invasion by annual grasses and the likelihood of recovery of native plants following disturbance. However, this framework does not currently account for biocrusts. We used data collected by the Bureau of Land Management Assessment, Inventory, and Monitoring program to relate biocrusts, specifically the presence of lichens and mosses, to the R&R framework. Lichens frequently occur on warm, dry sites, classified as lower R&R. Mosses frequently occur on sites classified as moderate or moderately low R&R. Without management practices that favor biocrusts in low-moderate R&R, these areas may be more vulnerable to transitioning from being dominated by shrubs to annual grasses. Under climate change scenarios, the area occupied by lower R&R sites is likely to increase, suggesting that the role of biocrusts in maintaining site resistance to invasion may also increase.

Arizona, California, Idaho, Nevada, Utah↗
USGS2016

Environment, host, and fungal traits predict continental-scale white-nose syndrome in bats

White-nose syndrome is a fungal disease killing bats in eastern North America, but disease is not seen in European bats and is less severe in some North American species. We show that how bats use energy during hibernation and fungal growth rates under different environmental conditions can explain how some bats are able to survive winter with infection and others are not. Our study shows how simple but nonlinear interactions between fungal growth and bat energetics result in decreased survival times at more humid hibernation sites; however, differences between species such as body size and metabolic rates determine the impact of fungal infection on bat survival, allowing European bat species to survive, whereas North American species can experience dramatic decline.

Science Advances↗
USGS2004

In situ evidence for an ancient aqueous environment at Meridiani Planum, Mars

Sedimentary rocks at Eagle crater in Meridiani Planum are composed of fine-grained siliciclastic materials derived from weathering of basaltic rocks, sulfate minerals (including magnesium sulfate and jarosite) that constitute several tens of percent of the rock by weight, and hematite. Cross-stratification observed in rock outcrops indicates eolian and aqueous transport. Diagenetic features include hematite-rich concretions and crystal-mold vugs. We interpret the rocks to be a mixture of chemical and siliciclastic sediments with a complex diagenetic history. The environmental conditions that they record include episodic inundation by shallow surface water, evaporation, and desiccation. The geologic record at Meridiani Planum suggests that conditions were suitable for biological activity for a period of time in martian history.

Science↗
USGS2016

Genome sequence of the photoarsenotrophic bacterium Ectothiorhodospira sp. strain BSL-9, isolated from a hypersaline alkaline arsenic-rich extreme environment

The full genome sequence of Ectothiorhodospira sp. strain BSL-9 is reported here. This purple sulfur bacterium encodes an arxA -type arsenite oxidase within the arxB2AB1CD gene island and is capable of carrying out “photoarsenotrophy” anoxygenic photosynthetic arsenite oxidation. Its genome is composed of 3.5 Mb and has approximately 63% G+C content.

Genome Announcements↗
USGS2025

CaDAVEr: A metagenome-assembled genome catalog of microbial decomposers across vertebrate environments

Microbial degradation of organic matter is a fundamental Earth process, yet a mechanistic understanding of microbial metabolisms and successional ecology involved in decomposition remains poorly understood. Here, we announce the recovery of 277 cadaver-associated soil metagenome-assembled genomes to enhance our understanding of vertebrate decomposition microbial processes.

Microbiology Resource Announcements↗
USGS1973

Oil shale formed in desert environment: Green River Formation, Wyoming

The oil shale beds of the Wilkins Peak Member of the Green River Formation differ from most of the Green River oil shale of Colorado and Utah because very few of them have varves; they have numerous mud cracks and, locally, desiccation breccias. Many have a copropelic microstructure and contain labial plates and skin fragments of chironomid larvae. Microfossils of some of these oil shale beds include such normally perishable things as first instar midge larvae, a single spiral chloroplast of a green alga, and sporangia of aquatic fungi. Taken together, these features indicate that the oil shale originated from algal ooze that formed on the bottom of very shallow, spring-fed lakes. The algae (dominantly blue-greens) were not planktonic but grew on, and in, the flocculent ooze. At intervals, perhaps tens to hundreds of years, the lake levels fell enough to expose the algal ooze to the air and partial drying. In the resulting rubbery organic gel, the most delicate microorganisms were heat-fixed and thereby preserved as “mummified” tissue.

Wyoming↗
USGS1991

Controls on the composition of fluvial sands from a tropical weathering environment: Sands of the Orinoco River drainage basin, Venezuela and Colombia

Fluvial sands in the Orinoco River drainage basin fall into three main compositional groupings: (1) sands of subarkose and arkose composition, from high-relief parts of the Guayana Shield, where crystalline rocks are exposed; (2) sands of litharenite and sub-litharenite composition from the active orogenic belt at the western and northwestern margins of the drainage basin, and in those parts of the Llanos (Andean foreland basin) proximal to the mountain belt; and (3) sands of quartz-arenite composition, widespread throughout the remainder of the basin. Multicycle sands of quartz-arenite composition are produced from platform cover on parts of the elevated shield and from uplifted foreland-basin fill in the eastern Llanos. First-cycle sands of quartz-arenite composition are produced from granitic rocks on low-relief regions of the Guayana Shield and from reworked Holocene alluvium in parts of the western Llanos distal to the orogenic terranes. Erosion in the Orinoco River drainage basin may be described in terms of transport-limited and weathering-limited denudation regimes. In active orogenic terranes and in parts of the elevated shield, transport processes can remove weathered material as rapidly as it is produced by chemical weathering. Thin soils and short soil-mineral residence time result in sands that are incompletely chemically weathered and accurately reflect source-rock composition. In the orogenic terranes, subtle variations in source-rock lithology are preserved in sand composition. In contrast, in low-relief parts of the Guayana Shield and on flat erosion surfaces of the upland shield, weathering exceeds the rate at which transport processes can remove weathered material. Thick soils accumulate, soil-mineral residence time is long, and detritus is highly altered chemically. On much of the lowland Guayana Shield, upper soil layers consist of nearly pure quartz sand that erodes to produce first-cycle fluvial sand of quartz-arenite composition. Chemically weathered orogenically derived sand enters the Orinoco River on the left bank, while feldspathic shield-derived sand enters on the right bank. This geometry is responsible for the nearly total lack of longitudinal variation in sand composition along the 1,400-km length of the Orinoco River mainstem. Except in the upper 100 km of the Orinoco River mainstem, cross-channel heterogeneity in sand composition is also modest. Nevertheless, a weighted linear least-squares modeling approach suggests that sand moves down the Orinoco River mainstem in distinct pulses, perhaps corresponding to times of accelerated erosion in headwater regions. Because rivers that head in the orogenic terranes and traverse the Llanos contribute more than 99% of the sand in the lower Orinoco River mainstem, the composition of this sand is dominated by chemically weathered sands from the Llanos. The Orinoco River—the third largest river in the world—delivers first-cycle sands of quartz-arenite composition to its delta.

Geological Society of America Bulletin↗