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At least 541 records · Page 30Linked to original sources
USGS2010

Reproductive ecology and habitat use of pacific Black Scoters (Melanitta nigra americana) nesting on the Yukon-Kuskokwim Delta, Alaska

Abundance indices of Black Scoters (Melanitta nigra. americana) breeding in Alaska indicate a long-term population decline without obvious cause (s). However, few life history data are available for the species in North America. In 2001–2004, information was collected on nesting habitat and reproductive parameters (i.e. components of productivity) from a population of Black Scoters nesting on the Yukon-Kuskokwim Delta, Alaska. A total of 157 nests were found over four years. Primarily, nests were among dense vegetation in shrub edge habitat, predominantly dwarf birch (Betula glandulosa) and Alaska spiraea (Spiraea beauverdiana), an average of 58 m from water. Females initiated nests from 11 June and 17 July across years. Clutch size averaged 7.5 eggs and did not vary annually. Nest success was highly variable among years and ranged from 0.01 to 0.37. Duckling survival to 30 days old varied among years, and ranged from 0.09 – 0.35. Nest success was poor in three of four years, likely due to predation by Red Fox (Vulpes vulpes). Black Scoters appear to have low but variable productivity, consistent with life-history patterns of other sea duck species. Information gained will direct future demographic research on Black Scoters, and highlights knowledge gaps impeding management strategies needed for population recovery.

Alaska↗
USGS2013

Software for analysis of chemical mixtures--composition, occurrence, distribution, and possible toxicity

The composition, occurrence, distribution, and possible toxicity of chemical mixtures in the environment are research concerns of the U.S. Geological Survey and others. The presence of specific chemical mixtures may serve as indicators of natural phenomena or human-caused events. Chemical mixtures may also have ecological, industrial, geochemical, or toxicological effects. Chemical-mixture occurrences vary by analyte composition and concentration. Four related computer programs have been developed by the National Water-Quality Assessment Program of the U.S. Geological Survey for research of chemical-mixture compositions, occurrences, distributions, and possible toxicities. The compositions and occurrences are identified for the user-supplied data, and therefore the resultant counts are constrained by the user’s choices for the selection of chemicals, reporting limits for the analytical methods, spatial coverage, and time span for the data supplied. The distribution of chemical mixtures may be spatial, temporal, and (or) related to some other variable, such as chemical usage. Possible toxicities optionally are estimated from user-supplied benchmark data. The software for the analysis of chemical mixtures described in this report is designed to work with chemical-analysis data files retrieved from the U.S. Geological Survey National Water Information System but can also be used with appropriately formatted data from other sources. Installation and usage of the mixture software are documented. This mixture software was designed to function with minimal changes on a variety of computer-operating systems. To obtain the software described herein and other U.S. Geological Survey software, visit http://water.usgs.gov/software/.

Scientific Investigations Report↗
USGS2020

Zero or not? Causes and consequences of zero-flow stream gage readings

Streamflow observations can be used to understand, predict, and contextualize hydrologic, ecological, and biogeochemical processes and conditions in streams. Stream gages are point measurements along rivers where streamflow is measured, and are often used to infer upstream watershed‐scale processes. When stream gages read zero, this may indicate that the stream has dried at this location; however, zero‐flow readings can also be caused by a wide range of other factors. Our ability to identify whether or not a zero‐flow gage reading indicates a dry fluvial system has far reaching environmental implications. Incorrect identification and interpretation by the data user can lead to inaccurate hydrologic, ecological, and/or biogeochemical predictions from models and analyses. Here, we describe several causes of zero‐flow gage readings: frozen surface water, flow reversals, instrument error, and natural or human‐driven upstream source losses or bypass flow. For these examples, we discuss the implications of zero‐flow interpretations. We also highlight additional methods for determining flow presence, including direct observations, statistical methods, and hydrologic models, which can be applied to interpret causes of zero‐flow gage readings and implications for reach‐ and watershed‐scale dynamics. Such efforts are necessary to improve our ability to understand and predict surface flow activation, cessation, and connectivity across river networks. Developing this integrated understanding of the wide range of possible meanings of zero‐flows will only attain greater importance in a more variable and changing hydrologic climate.

WIREs Water↗
USGS2017

Indicator-driven conservation planning across terrestrial, freshwater aquatic, and marine ecosystems of the south Atlantic, USA

Systematic conservation planning, a widely used approach to identify priority lands and waters, uses efficient, defensible, and transparent methods aimed at conserving biodiversity and ecological systems. Limited financial resources and competing land uses can be major impediments to conservation; therefore, participation of diverse stakeholders in the planning process is advantageous to help address broad-scale threats and challenges of the 21st century. Although a broad extent is needed to identify core areas and corridors for fish and wildlife populations, a fine-scale resolution is needed to manage for multiple, interconnected ecosystems. Here, we developed a conservation plan using a systematic approach to promote landscape-level conservation within the extent of the South Atlantic Landscape Conservation Cooperative. Our objective was to identify the highest-ranked 30% of lands and waters within the South Atlantic deemed necessary to conserve ecological and cultural integrity for the 10 primary ecosystems of the southeastern United States. These environments varied from terrestrial, freshwater aquatic, and marine. The planning process was driven by indicators of ecosystem integrity at a 4-ha resolution. We used the program Zonation and 28 indicators to optimize the identification of lands and waters to meet the stated objective. A novel part of our study was the prioritization of multiple ecosystems, and we discuss the advantages and disadvantages of this approach. The evaluation of indicator representation within prioritizations was a useful method to show where improvements could be made; some indicators dictated hotspots, some had a limited extent and were well represented, and others had a limited effect. Overall, we demonstrate that a broad-scale (408,276 km 2 of terrestrial and 411,239 km 2 of marine environments) conservation plan can be realized at a fine-scale resolution, which will allow implementation of the regional plan at a local level relevant to decision making.

Journal of Fish and Wildlife Management↗
USGS2017

Multiscale guidance and tools for implementing a landscape approach to resource management in the Bureau of Land Management

The Bureau of Land Management (BLM) is implementing a landscape approach to resource management (hereafter, landscape approach) to more effectively work with partners and understand the effects of management decisions. A landscape approach is a set of concepts and principles used to guide resource management when multiple stakeholders are involved and goals include diverse and sustainable social, environmental, and economic outcomes. Core principles of a landscape approach include seeking meaningful participation of diverse stakeholders, considering diverse resource values in multifunctional landscapes, acknowledging the tradeoffs needed to meet diverse objectives in the context of sustainable resource management, and addressing the complexity of social and ecological processes by embracing interdisciplinarity and considering multiple and broad spatial and temporal perspectives. In chapter 1, we outline the overall goal of this report: to provide a conceptual foundation and framework for implementing a landscape approach to resource management in the BLM, focusing on the role of multiscale natural resource monitoring and assessment information. In chapter 2, we describe a landscape approach to resource management. BLM actions taken to implement a landscape approach include a major effort to compile broad-scale data on natural resource status and condition across much of the west. These broadscale data now provide a regional context for interpreting monitoring data collected at individual sites and informing decisions made for local projects. We also illustrate the utility of using multiscale data to understand potential effects of different resource management decisions, define relevant terms in landscape ecology, and identify spatial scales at which planning and management decisions may be evaluated. In chapter 3, we describe how the BLM Rapid Ecoregional Assessment program and Assessment, Inventory and Monitoring program may be integrated to provide the multiscale monitoring data needed to inform a landscape approach. We propose six core, broad-scale indicators of natural resource status and condition: the amount, spatial distribution, patch size and connectivity of ecosystems and wildlife habitats, and the pattern of existing development across the landscape. Additional supplemental broad-scale indicators may include fire return intervals, distributions of invasive species, and vulnerability of ecosystems to a changing climate. Landscape intactness is an additional derived indicator that is calculated from one or more of the core and supplemental broad-scale indicators. We then outline a process for assessing broad-scale indicators that is consistent with the overall BLM Assessment, Inventory, and Monitoring process, facilitating development of a multiscale natural resource monitoring program. Finally, we describe how broad-scale indicators of natural resource status and condition may guide field monitoring implemented through the BLM Assessment, Inventory and Monitoring program and help address complex management questions. In chapter 4, we consider the specific question of assessing the ecological integrity of rangelands across the western United States. We first define ecological integrity and its relation to land health. We then suggest that a combination of six local-scale indicators collected through field sampling at individual sites and five complementary broad-scale indicators together provide information on the composition, structure, and function of rangelands. The terrestrial monitoring indicators collected at the level of individual field sites are the amount of bare ground, vegetation composition (including invasive plants and plants of management concern), vegetation height, and the proportion of the soil surface in large intercanopy gaps. The broad-scale indicators are vegetation amount, distribution, patch size, connectivity, and productivity, along with the pattern of terrestrial development. Our suggested approach to quantifying ecological integrity focuses specifically on informing management of public lands for multiple resource uses, and illustrates how existing data collected through BLM monitoring and assessment programs may be used together to provide multiscale information on land condition across broad extents. In chapter 5, we develop a method for quantifying landscape intactness and apply this method to the western United States. Our multiscale index of landscape intactness is designed to be defensible, decomposable, and easy to understand. The foundation of the multiscale index of landscape intactness is the surface disturbance footprint of anthropogenic development, including energy and urban development, roads and railroads, cultivated croplands, surface mines and quarries, and energy transmission lines and pipelines. The index represents a gradient of anthropogenic influence as represented by development summarized at two spatial scales of analysis: 2.5 and 20 kilometers. We provide several example applications of the index, illustrating how these data may inform natural resource decisions at the spatial extent of BLM field and district offices, states, ecoregions, and the western United States. We find that 19.2 percent of lands managed by the BLM across the 17 western states of the conterminous United States had the highest landscape intactness. The largest intact areas occur on public lands at high elevations or in the Great Basin. We believe the frameworks, processes, and analyses provided in this report will improve the ability of the BLM to identify and evaluate potential direct and indirect effects of management actions (such as habitat restoration and renewable energy development), and assist the BLM in further implementing a landscape approach to resource management.

Open-File Report↗
USGS2007

A Dreissena Risk Assessment for the Colorado River Ecosystem

Executive Summary Nonnative zebra and quagga mussels (Dreissena polymorpha and Dreissena bugensis, respectively; see photo above) were accidentally introduced to the Great Lakes in the 1980s and subsequently spread to watersheds of the Eastern United States (Strayer and others, 1999). The introduction of Dreissena mussels has been economically costly and has had large and far-reaching ecological impacts on these systems. Quagga mussels were found in Lakes Mead and Havasu in January 2007. Given the likelihood that quagga mussels and, eventually, zebra mussels will be introduced to Lake Powell and the Colorado River at Lees Ferry, it is important to assess the risks that introduction of Dreissena mussels pose to the Colorado River ecosystem (here defined as the segment of river from just below Glen Canyon Dam to Diamond Creek; hereafter CRE). In this report, I assess three different types of risks associated with Dreissena and the CRE: (1) the risk that Dreissena will establish at high densities in the CRE, (2) the risk of ecological impacts should Dreissena establish at high densities in the CRE or in Lake Powell, and (3) the risk that Dreissena will be introduced to tributaries of the CRE. The risk of Dreissena establishing within the CRE is low, except for the Lees Ferry tailwater reach where the risk appears high. Dreissena are unlikely to establish at high densities within the CRE or its tributaries because of high suspended sediment, high ratios of suspended inorganic:organic material, and high water velocities, all of which interfere with the ability of Dreissena to effectively filter feed. The rapids of Grand Canyon may represent a large source of mortality to larval Dreissena, which would limit their ability to disperse and colonize downstream reaches of the CRE. In contrast, conditions within the Lees Ferry tailwater generally appear suitable for Dreissena establishment, with the exception of high average water velocity. If Dreissena establish within the CRE, the risks of negative ecological impacts appear low. If Dreissena are able to attain moderate densities in Lees Ferry, estimates of filtration capacity indicate they are unlikely to substantially alter the composition (e.g., nutrient concentrations, suspended organic matter concentrations) of water exported from Lees Ferry. Further, a moderate density of Dreissena within Lees Ferry may actually increase food available to fishes by increasing habitat complexity and stimulating benthic production. If Dreissena attain moderate densities in the CRE mainstem, which seems unlikely, ecological impacts will probably be comparable to Lees Ferry-an increase in benthic production. Dreissena may have ecological impacts on the CRE, if they become established in Lake Powell and substantially alter the composition of water released from Glen Canyon Dam; however, it is unclear whether changes in the composition of water released from Glen Canyon Dam will have a net positive or negative impact on food availability in the CRE mainstem. The risk of Dreissena introduction to tributaries appears low. None of the tributaries have upstream lakes or reservoirs that could actually serve as a source population for Dreissena; reservoirs on the Little Colorado River may eventually support Dreissena, but they are far up in the watershed and the segment of river connecting them with the mainstem CRE is intermittent. If the CRE mainstem is colonized by Dreissena, there are no significant vectors for transporting them upstream into the tributaries. In addition, lethally high summer water temperatures make it unlikely that Dreissena will establish in many tributaries. Lake Powell is a logical focus for management and research efforts, given that maintenance of Dreissena populations within the CRE will require an upriver source population and the uncertainty associated with the downstream impact of changes in Lake Powell water quality.

Open-File Report↗
USGS2014

Status and trends of Caribbean coral reefs: 1970-2012

This it the 9th status report since the Global Coral Reef Monitoring Network (GCRMN) was founded in 1995 was the data arm of the International Coral Reef Initiative (ICRI) to document the ecological condition or corral reefs, strengthen monitoring efforts, and link existing organizations and people working on reefs worldwide. The US Government provided the initial funding to help set up a global network of coral reef workers and has continued to provide core support. Since then, the series of reports have aimed to present the current status of coral reefs of the world or particular regions, the major threats to reefs and their consequences, and any initiative undertaken under the auspices of ICRI or other bodies to arrest or reverse the decline of coral reefs. IUCN assumed responsibility for hosting the global coordination of the GCRMN in 2010 under the scientific direction of Jeremy Jackson with the following objectives: 1. Document quantitatively the global status and trends for corals, macroalgae, sea urchins, and fishes based on available data from individual scientists as well as the peer reviewed scientific literature, monitoring programs, and report. 2. Bring together regional experts in a series of workshops to involve them in data compilation, analysis, and synthesis. 3. Integrate coral reef status and trends with independent environmental, management, and socioeconomic data to better understand the primary factors responsible for coral reef decline, the possible synergies among factors that may further magnify their impacts, and how these stresses may be more effectively alleviated. Work with GCRMN partners to establish simple and practical standardized protocols for future monitoring and assessment. Disseminate information and results to help guide member state policy and actions. The overarching objective is to understand why some reefs are much healthier than others, to identify what kinds of actions have been particularly beneficial or harmful, and to vigorously communicate results in simple and straightforward terms to foster more effective conservation and management. This and subsequent reports will focus on separate biogeographic regions in a stepwise fashion and combine all of the results for a global synthesis in the coming years. We began in the wide Caribbean region because the historical data are so extensive and to refine methods of analysis before moving on to other regions. This report documents quantitative trends for Caribbean reef corals, macroalgae, sea urchins, and fishes based on data from 90 reef locations over the past 43 tears. This is the first report to combine all these disparate kinds of data in a single place to explore how the different major components of coral reef ecosystems interact on a broadly regional oceanic scale. We obtained data from more than 35,000 ecological surveys carried out by 78 principal investigators (PIs) and some 200 colleagues working in 34 countries, states, and territories throughout the wide Caribbean region. We conducted two workshops in Panama and Brisbane, Australia to bring together people who provided the data to assist in data quality control, analysis, and synthesis. The first workshop at the Smithsonian Tropical Research Institute (STRI) in the Republic of Panama 29 April to 5 May, 2012 included scientists from 18 countries and territories to verify and expand the database and to conduct exploratory analyses of status and trends. Preliminary results based on the Panama workshop were presented to the DC Marine Community and Smithsonian Institution Senate of Scientists in May 2012 and at the International Coral Reef Symposium (ICRS) and annual ICRI meeting in Cairns, Australia in July 2012. The second workshop in Brisbane, Australia in December 2012 brought together eight coral reef scientists for more detailed data analysis and organization of results for this report and subsequent publications. Subsequent presentations to solicit comments while the report was being finalized were made in 2013-2014 at the ICRI General meeting in Belize, the biennial meeting of the Association of Island Marine Laboratories in Jamaica, the Panamerican Coral Reef Congress in Merida, Mexico, the annual meeting of he Western Society of Naturalists, and numerous universities in Costa Rica, the USA and Europe. The main body of the report is in two sections. Part I provides an overview of overall status and trends and detailed analyses of the multiple factors responsible for the decline of reef corals throughout the entire wider Caribbean region. The editors are grateful to all the people who have so generously provided data and expertise, but we assume responsibility for the many statements, conclusions and recommendations and final wording of the text. Part II provides a more detailed analysis of the status and trends of coral reef ecosystems in the 32 countries, states, and territories for which we have data. The format includes maps indicating all locations sampled, a detailed table of data sources and sites surveyed, timelines of ecologically important evens, and relevant references. Each of these reports was compiled in consultation with local experts and all those who provided data and advice are listed as authors of each country report.

Report↗
USGS2012

Likelihood analysis of species occurrence probability from presence-only data for modelling species distributions

1. Understanding the factors affecting species occurrence is a pre-eminent focus of applied ecological research. However, direct information about species occurrence is lacking for many species. Instead, researchers sometimes have to rely on so-called presence-only data (i.e. when no direct information about absences is available), which often results from opportunistic, unstructured sampling. MAXENT is a widely used software program designed to model and map species distribution using presence-only data. 2. We provide a critical review of MAXENT as applied to species distribution modelling and discuss how it can lead to inferential errors. A chief concern is that MAXENT produces a number of poorly defined indices that are not directly related to the actual parameter of interest – the probability of occurrence ( ψ ). This focus on an index was motivated by the belief that it is not possible to estimate ψ from presence-only data; however, we demonstrate that ψ is identifiable using conventional likelihood methods under the assumptions of random sampling and constant probability of species detection. 3. The model is implemented in a convenient r package which we use to apply the model to simulated data and data from the North American Breeding Bird Survey. We demonstrate that MAXENT produces extreme under-predictions when compared to estimates produced by logistic regression which uses the full (presence/absence) data set. We note that MAXENT predictions are extremely sensitive to specification of the background prevalence, which is not objectively estimated using the MAXENT method. 4. As with MAXENT, formal model-based inference requires a random sample of presence locations. Many presence-only data sets, such as those based on museum records and herbarium collections, may not satisfy this assumption. However, when sampling is random, we believe that inference should be based on formal methods that facilitate inference about interpretable ecological quantities instead of vaguely defined indices.

Methods in Ecology and Evolution↗
USGS2020

Seasonality of biological and physical systems as indicators of climatic variation and change

Evidence-based responses to climate change by society require operational and sustained information including biophysical indicator systems that provide up-to-date measures of trends and patterns against historical baselines. Two key components linking anthropogenic climate change to impacts on socio-ecological systems are the periodic inter- and intra-annual variations in physical climate systems (seasonality) and in plant and animal life cycles (phenology). We describe a set of national indicators that reflect sub-seasonal to seasonal drivers and responses of terrestrial physical and biological systems to climate change and variability at the national scale. Proposed indicators and metrics include seasonality of surface climate conditions (e.g., frost and freeze dates and durations), seasonality of freeze/thaw in freshwater systems (e.g., timing of stream runoff and durations of lake/river ice), seasonality in ecosystem disturbances (e.g., wildfire season timing and duration), seasonality in vegetated land surfaces (e.g., green-up and brown-down of landscapes), and seasonality of organismal life-history stages (e.g., timings of bird migration). Recommended indicators have strong linkages to variable and changing climates, include abiotic and biotic responses and feedback mechanisms, and are sufficiently simple to facilitate communication to broad audiences and stakeholders interested in understanding and adapting to climate change.

Climatic Change↗
USGS2013

Landscape indicators and land cover change in the Mid-Atlantic Region of the United States, 1973-2001

Landscape indicators, derived from land use and land cover data as well as other data, were used to calculate the ecological consequences of land cover change in terms of nitrate loading and physical bird habitat. Both were modeled from 1973, 1992, and 2001 land cover data in the Mid-Atlantic region of the United States. Land cover statistics and trends are calculated for three time periods. In general, forest gain and agricultural loss was found in areas of improving landscape indicators and forest loss and agricultural gain was found to occur in areas of declining indicators, which was confirmed by high-resolution aerial photographic analysis.

Delaware, Maryland, New Jersey, New York, North Ca↗
USGS2018

Host feeding ecology and trophic position significantly influence isotopic discrimination between a generalist ectoparasite and its hosts: Implications for parasite-host trophic studies

Despite being one of the most prevalent forms of consumerism in ecological communities, parasitism has largely been excluded from food-web models. Stable isotope analysis of consumers and their diets has been widely used in the study of food webs for decades. However, the amount of information regarding parasite stable isotope ecology is limited, restricting the ability of ecologists to use stable isotope analysis to study parasites in food webs. This study took advantage of distinct differences in the feeding ecology and trophic position of different species of fish known to host the same common micropredatory gnathiid isopod to study the effects of host stable isotope ecology on that of the associated micropredator. Blood engorged juvenile gnathiids were in most cases indistinguishable from their hosts' blood, but significant isotope discrimination was observed for adults. Males were generally lower in δ 13 C and δ 15 N than host blood whereas host-specific isotopic discrimination for females varied among the different host species. Model predictions indicated that there is a significant effect of host blood isotope ratios on the rate of carbon and nitrogen isotopic discrimination between gnathiids and their host’s blood. As such, general differences in the feeding ecology and trophic positions of the different host species were reflected in their associated gnathiids, indicating that stable isotope analysis of gnathiids can provide significant details concerning previous hosts. The results presented herein have significant implications for how stable isotopes may be used as a tool to study the trophic dynamics and feeding ecology of gnathiids.

Food Webs↗
USGS2023

Virtual snow stakes: a new method for snow depth measurement at remote camera stations

Remote cameras are used to study demographics, ecological processes, and behavior of wildlife populations. Cameras have also been used to measure snow depth with physical snow stakes. However, concerns that physical instruments at camera sites may influence animal behavior limit installation of instruments to facilitate collecting such data. Given that snow depth data are inherently contained within images, potential insights that could be made using these data are lost. To facilitate camera-based snow depth observations without additional equipment installation, we developed a method implemented in an R package called edger to superimpose virtual measurement devices onto images. The virtual snow stakes can be used to derive snow depth measurements. We validated the method for snow depth estimation using camera data from Latah County, Idaho, USA in winter 2020–2021. Mean bias error between the virtual snow stake and a physical snow stake was 5.8 cm; the mean absolute bias error was 8.8 cm. The mean Nash Sutcliffe Efficiency score comparing the fit of the 2 sets of measurements within each camera was 0.748, indicating good agreement. The edger package provides researchers with a means to take critical measurements for ecological studies without the use of physical objects that could alter animal behavior, and snow data at finer scales can complement other snow data sources that have coarser spatial and temporal resolution.

Idaho↗
USGS2025

Restoring the Florida Everglades: Insights on integrating sea level rise into decision-support tools

Although coastal ecosystems are impacted by climate change and sea-level rise, many ecological and hydrological models do not yet incorporate sea-level rise projections in their modeling outputs. Therefore, this research examined the various challenges that may prevent sea-level rise from being effectively incorporated in modeling and decision-support tools. We conducted semi-structured interviews with twenty-six professionals involved in Florida’s Everglades restoration. We applied the Diffusions of Innovations Theory to better understand factors that can impact practitioners’ adoption of newly designed decision-support tools that examine sea-level rise in the freshwater Everglades. The Diffusions of Innovations Theory provided insights into practitioners’ perceptions of these tools. We found that these practitioners have a strong interest in using dynamic decision-support tools to plan for sea-level rise impacts on Everglades restoration, particularly when they receive information at appropriate geographic and temporal scales and are given hands-on tools and training. However, challenges that prevent developing these tools include outdated data, limited organizational capacity and funding, limited use of long-term indicators, uncertainty about climate change impacts on local ecosystems, and lack of integration between hydrological and ecological models. Our research also highlights that greater availability of different types of tools can help to meet the needs of the scientific and non-scientific audiences involved in Everglades restoration.

Florida↗
USGS2021

Periphyton biomass and community compositions as indicators of water quality in the Lower Grand River hydrologic unit, Missouri and Iowa, 2011–18

Biological communities, including periphyton, are continuously affected by chemical, physical, and other biological factors, and the health of these communities can reflect the overall health of the aquatic system. A diverse community is more robust, and communities with lower richness and evenness often indicate a degraded community dominated by few taxa tolerant to the degraded conditions, which makes the community more susceptible to ecological changes. Water-quality nutrient samples were collected at sites in the Lower Grand River during 2010 through 2018 and periphyton sample collections began in 2011 to describe the periphyton community and overall ecological health. Nutrient sample concentrations were generally elevated at these sites, which can lead to eutrophication, excessive plant and algae growth, drinking-water taste and odor problems, low dissolved-oxygen concentrations, and harmful algal blooms. Concentrations of total nitrogen were greater than acceptable as described by the U.S. Environmental Protection Agency, and total phosphorus concentrations were greater than reference concentrations. Periphyton communities were dominated by taxa that are tolerant to or indicative of elevated nutrient concentrations; and nuisance algae, or harmful algal bloom producers, were identified at all sites, except one. The presence of these producers indicates that harmful algal blooms may have high potential during optimal conditions at these sites. Chlorophyll concentrations that exceed 100 milligrams per square meter are considered nuisance and were determined in 11 percent of the samples and at every site during September 2012. Samples were collected during low-flow conditions when nutrient concentrations are generally lower than during high-flow and runoff conditions. Elevated nutrient concentrations during low-flow conditions indicate nutrient concentrations are likely elevated throughout most of the year. Agriculture is the primary land use within the Lower Grand River and is likely a primary source of nutrients and sediments. Conservation practices intended to reduce nutrient loss from agriculture fields have increased because of the Mississippi River Basin Healthy Watersheds Initiative and will potentially increase the ecological, chemical, and physical health of these waterways.

Iowa, Missouri↗
USGS2018

Informing research priorities for immature sea turtles through expert elicitation

Although sea turtles have received substantial focus worldwide, research on the immature life stages is still relatively limited. The latter is of particular importance, given that a large proportion of sea turtle populations comprises immature individuals. We set out to identify knowledge gaps and identify the main barriers hindering research in this field. We analyzed the perceptions of sea turtle experts through an online survey which gathered their opinions on the current state of affairs on immature sea turtle research, including species and regions in need of further study, priority research questions, and barriers that have interfered with the advancement of research. Our gap analysis indicates that studies on immature leatherback Dermochelys coriacea and hawksbill Eretmochelys imbricata turtles are lacking, as are studies on all species based in the Indian, South Pacific, and South Atlantic Oceans. Experts also perceived that studies in population ecology, namely on survivorship and demography, and habitat use/behavior, are needed to advance the state of knowledge on immature sea turtles. Our survey findings indicate the need for more inter-disciplinary research, collaborative efforts (e.g. data-sharing, joint field activities), and improved communication among researchers, funding bodies, stakeholders, and decision-makers.

Endangered Species Research↗
USGS2013

Assessing impacts of roads: application of a standard assessment protocol

Adaptive management of road networks depends on timely data that accurately reflect the impacts those systems are having on ecosystem processes and associated services. In the absence of reliable data, land managers are left with little more than observations and perceptions to support management decisions of road-associated disturbances. Roads can negatively impact the soil, hydrologic, plant, and animal processes on which virtually all ecosystem services depend. The Interpreting Indicators of Rangeland Health (IIRH) protocol is a qualitative method that has been demonstrated to be effective in characterizing impacts of roads. The goal of this study were to develop, describe, and test an approach for using IIRH to systematically evaluate road impacts across large, diverse arid and semiarid landscapes. We developed a stratified random sampling approach to plot selection based on ecological potential, road inventory data, and image interpretation of road impacts. The test application on a semiarid landscape in southern New Mexico, United States, demonstrates that the approach developed is sensitive to road impacts across a broad range of ecological sites but that not all the types of stratification were useful. Ecological site and road inventory strata accounted for significant variability in the functioning of ecological processes but stratification based on apparent impact did not. Analysis of the repeatability of IIRH applied to road plots indicates that the method is repeatable but consensus evaluations based on multiple observers should be used to minimize risk of bias. Landscape-scale analysis of impacts by roads of contrasting designs (maintained dirt or gravel roads vs. non- or infrequently maintained roads) suggests that future travel management plans for the study area should consider concentrating traffic on fewer roads that are well designed and maintained. Application of the approach by land managers will likely provide important insights into minimizing impacts of road networks on key ecosystem services.

Rangeland Ecology and Management↗
USGS2008

Effects of the herbicide diuron on cordgrass (Spartina foliosa) reflectance and photosynthetic parameters

Early indicators of salt marsh plant stress are needed to detect stress before it is manifested as changes in biomass and coverage. We explored a variety of leaf-level spectral reflectance and fluorescence variables as indicators of stress in response to the herbicide diuron. Diuron, a Photosystem II inhibitor, is heavily used in areas adjacent to estuaries, but its ecological effects are just beginning to be recognized. In a greenhouse experiment, we exposed Spartina foliosa , the native cordgrass in California salt marshes, to two levels of diuron. After plant exposure to diuron for 28 days, all spectral reflectance indices and virtually all fluorescence parameters indicated reduced pigment and photosynthetic function, verified as reduced CO 2 assimilation. Diuron exposure was not evident, however, in plant morphometry, indicating that reflectance and fluorescence were effective indicators of sub-lethal diuron exposure. Several indices (spectral reflectance index ARI and fluorescence parameters EQY, Fo, and maximum rETR) were sensitive to diuron concentration. In field trials, most of the indices as well as biomass, % cover, and canopy height varied predictably and significantly across a pesticide gradient. In the field, ARI and Fo regressed most significantly and strongly with pesticide levels. The responses of ARI and Fo in both the laboratory and the field make these indices promising as sensitive, rapid, non-destructive indicators of responses of S. foliosa to herbicides in the field. These techniques are employed in remote sensing and could potentially provide a link between landscapes of stressed vegetation and the causative stressor(s), which is crucial for effective regulation of pollution.

Estuaries and Coasts↗
USGS2020

Climate-change refugia in boreal North America: What, where, and for how long?

T The vast boreal biome plays an important role in the global carbon cycle but is experiencing particularly rapid climate warming, threatening the integrity of valued ecosystems and their component species. We developed a framework and taxonomy to identify climate‐change refugia potential in the North American boreal region, summarizing current knowledge regarding mechanisms, geographic distribution, and landscape indicators. While “terrain‐mediated” refugia will mostly be limited to coastal and mountain regions, the ecological inertia (resistance to external fluctuations) contained in some boreal ecosystems may provide more extensive buffering against climate change, resulting in “ecosystem‐protected” refugia. A notable example is boreal peatlands, which can retain high surface soil moisture and water tables even in the face of drought. Refugia from wildfire are also especially important in the boreal region, which is characterized by active disturbance regimes. Our framework will help identify areas of high refugia potential, and inform ecosystem management and conservation planning in light of climate change.

North America↗