Waterfowl habitat management in the Mississippi Alluvial Valley
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Arkansas, Illinois, Kentucky, Louisiana, Mississip↗
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Annual ground-water discharge by evapotranspiration from areas of spring-fed riparian vegetation along the eastern margin of Death Valley, 2000-02
Flow from major springs and seeps along the eastern margin of Death Valley serves as the primary local water supply and sustains much of the unique habitat in Death Valley National Park. Together, these major spring complexes constitute the terminus of the Death Valley Regional Ground-Water Flow System--one of the larger flow systems in the Southwestern United States. The Grapevine Springs complex is the least exploited for water supply and consequently contains the largest area of undisturbed riparian habitat in the park. Because few estimates exist that quantify ground-water discharge from these spring complexes, a study was initiated to better estimate the amount of ground water being discharged annually from these sensitive, spring-fed riparian areas. Results of this study can be used to establish a basis for estimating water rights and as a baseline from which to assess any future changes in ground-water discharge in the park. Evapotranspiration (ET) is estimated volumetrically as the product of ET-unit (general vegetation type) acreage and a representative ET rate. ET-unit acreage is determined from high-resolution multi-spectral imagery; and a representative ET rate is computed from data collected in the Grapevine Springs area using the Bowen-ratio solution to the energy budget, or from rates given in other ET studies in the Death Valley area. The ground-water component of ET is computed by removing the local precipitation component from the ET rate. Two different procedures, a modified soil-adjusted vegetation index using the percent reflectance of the red and near-infrared wavelengths and land-cover classification using multi-spectral imagery were used to delineate the ET units within each major spring-discharge area. On the basis of the more accurate procedure that uses the vegetation index, ET-unit acreage for the Grapevine Springs discharge area totaled about 192 acres--of which 80 acres were moderate-density vegetation and 112 acres were high-density vegetation. ET-unit acreage for two other discharge areas delineated in the Grapevine Springs area (Surprise Springs and Staininger Spring) totaled about 6 and 43 acres, respectively; and for the discharge areas delineated in the Furnace Creek area (Nevares Springs, Cow Creek-Salt Springs, Texas Spring, and Travertine Springs) totaled about 29, 13, 11, and 21 acres, respectively. In discharge areas other than Grapevine Springs, watering and spring diversions have altered the natural distribution of the vegetation. More...
Scientific Investigations Report↗
Temporospatial shifts in Sandhill Crane staging in the Central Platte River Valley in response to climatic variation and habitat change
Over 80% of the Mid-Continent Sandhill Crane ( Antigone canadensis ) Population (MCP), estimated at over 660,000 individuals, stops in the Central Platte River Valley (CPRV) during spring migration from mid-February through mid-April. Research suggests that the MCP may be shifting its distribution spatially and temporally within the CPRV. From 2002 to 2017, we conducted weekly aerial surveys of Sandhill Cranes staging in the CPRV to examine temporal and spatial trends in their abundance and distribution. Then, we used winter temperature and drought severity measures from key wintering and early migratory stopover locations to assess the impacts of weather patterns on annual migration chronology in the CPRV. We also evaluated channel width and land cover characteristics using aerial imagery from 1938, 1998, and 2016 to assess the relationship between habitat change and the spatial distribution of the MCP in the CPRV. We used generalized linear models, cumulative link models, and Akaike’s information criterion corrected for small sample sizes (AICc) to compare temporal and spatial models. Temperatures and drought conditions at wintering and migration locations that are heavily used by Greater Sandhill Cranes ( A. c. tabida ) best predicted migration chronology of the MCP to the CPRV. The spatial distribution of roosting Sandhill Cranes from 2015 to 2017 was best predicted by the proportion of width reduction in the main channel since 1938 (rather than its width in 2016) and the proportion of land cover as prairie-meadow habitat within 800 m of the Platte River. Our data suggest that Sandhill Cranes advanced their migration by an average of just over 1 day per year from 2002 to 2017, and that they continued to shift eastward, concentrating at eastern reaches of the CPRV. Climate change, land use change, and habitat loss have all likely contributed to Sandhill Cranes coming earlier and staying longer in fewer reaches of the CPRV, increasing their site use intensity. These historically unprecedented densities may present a disease risk to Sandhill Cranes and other waterbirds, including Whooping Cranes ( Grus americana ). Our models suggest that conservation actions may be maintaining Sandhill Crane densities in areas that would otherwise be declining in use. We suggest that management actions intended to mitigate trends in the distribution of Sandhill Cranes, including wet meadow restoration, may similarly benefit prairie- and braided river–endemic species of concern.
Nebraska↗
Determining the distribution, status, and linkages of Agassiz's desert tortoise populations in the uplands surrounding the Coachella Valley
In support of the goals of the Coachella Valley Conservation Commission and the Bureau of Land Management, we performed surveys to determine the status, distribution, demographics, and possible genetic linkages of Agassiz’s desert tortoise (Gopherus agassizii) populations within the Coachella Valley Multiple Species Habitat Conservation Plan (CVMSHCP) area during a multi-decadal megadrought. Federal, state, and numerous parcels of privately owned conservation lands in the uplands around the periphery of the Coachella Valley were surveyed. Desert tortoise distribution data collected will be used to develop a species habitat model. These data will be overlaid with location data of flammable invasive plant species to inform fuels management and invasive plant control efforts in sensitive species habitat, as well as continue to identify high quality habitat and important desert tortoise linkage areas around the Coachella Valley. We also surveyed two established G. agassizii study plots – one at the Mesa Wind Energy Facility near Palm Springs, California and one at the Boyd Deep Canyon Desert Research Center. At those locations, we used resurveys and radio telemetry to assess habitat use, demography, and population status. We also used camera trapping at Deep Canyon to observe tortoise activities and behaviors in an unusual low elevation tortoise habitat.
California↗
Distribution and abundance of fungi in the soils of Taylor Valley, Antarctica
The occurrence and distribution of culturable fungi in Taylor Valley, Antarctica was assessed in terms of soil habitat. Soil transects throughout the valley revealed differential habitat utilization between filamentous and non-filamentous (yeast and yeast-like) fungi. In addition, there were significant differences in species distribution patterns with respect to soil pH, moisture, distance from marine coastline, carbon, chlorophyll a, salinity, elevation and solar inputs. Filamentous fungal abundance is most closely associated with habitats having higher pH, and soil moistures. These close associations were not found with yeast and yeast-like fungi demonstrating that yeast and yeast-like fungi utilize a broader range of habitat. An intensive survey of the Victoria Land is necessary to gain a better understanding of their role in soil functioning and nutrient cycling processes. ?? 2006 Elsevier Ltd. All rights reserved.
Soil Biology and Biochemistry↗
Integrating research and management to conserve wildfowl (Anatidae) and wetlands in the Mississippi Alluvial Valley, U.S.A
Efforts to conserve winter habitat for wildfowl, Anatidae, in the alluvial valley of the lower Mississippi River, U.S.A., are directed by the Lower Mississippi Valley (LMV) Joint Venture of the North American Waterfowl Management Plan (NA WMP). The Joint Venture is based on a biological framework developed through cooperative planning by wildfowl researchers and managers. Important elements of the framework include: (1) numeric population goals, (2) assumptions about potential limiting factors, (3) explicit relationships between wildfowl abundance and habitat characteristics, (4) numeric foraging habitat goals, and (5) criteria for evaluating success. The population goal of the Joint Venture for the Mississippi Alluvial Valley (MA V) is to enable 4.3 million ducks to, survive winter and join continental breeding populations in spring. Currently, available data suggest that foraging habitat is the primary factor limiting duck populations in the MA II. To establish a goal for foraging habitat, we assumed the length of the wintering period is 110 days and calculated that a population of 4.3 million breeding ducks (plus 15% to account for winter mortality) would need 546 million duck-days of food in the preceding winter. Then, we used estimates of daily energy requirements, food densities, and food energy values to calculate the carrying capacity or number of duck-days of food available in the three primary foraging habitats in the MAV (flooded croplands, forested wetlands, and moist-soil wetlands). Thus, availability of foraging habitat can be used as a criterion for evaluating success of the Joint Venture if accurate inventories of foraging habitat can be conducted. Development of an explicit biological framework for the Joint Venture enabled wildfowl managers and researchers to establish specific objectives for management of foraging habitat and identify priority problems requiring further study.
Book chapter↗
Greater sage-grouse of Grand Teton National Park: where do they roam?
Greater sage-grouse (Centrocercus urophasianus) population declines may be caused by range-wide degradation of sagebrush (woody Artemisia spp.) steppe ecosystems. Understanding how greater sage-grouse use the landscape is essential for successful management. We assessed greater sage-grouse habitat selection on a landscape level in Jackson Hole, Wyoming. We used a Geographic Information System (GIS) and radio-collared sage-grouse to compare habitat used and the total available landscape. Greater sage-grouse selected mountain big sagebrush (A. tridentata var. vaseyana) communities or mixed mountain big sagebrush–antelope bitterbrush (Purshia tridentata) communities and avoided low-sagebrush (A. arbuscula) dwarf shrubland. In spring and summer, sage-grouse primarily used sagebrush-dominated habitats on the valley floor and did not concentrate in mesic areas later in the summer as is typical of the species. The diversity of habitats used in winter exceeds that reported in the literature. In winter, Jackson Hole greater sage-grouse moved to hills, where they used various communities in proportion to their availability, including tall deciduous shrublands, cottonwood (Populus angustifolia) stands, exposed hillsides, and aspen (P. tremuloides) stands. Because seasonal habitat selection is not necessarily consistent across populations residing in different landscapes, habitat management should be specific to each population and landscape. This sage-grouse population provides an example that may offer insight into other species with seasonal habitat needs.
Grand Teton National Park↗
Potential for recreational restrictions to reduce grizzly bear–caused human injuries
In 2011, 2 hikers were killed by grizzly bears (Ursus arctos) in separate incidents on backcountry trails in Hayden Valley, Yellowstone National Park, USA (YNP). Hayden Valley provides prime habitat for grizzly bears and is known to have high densities of bears. During 1970–2017, 23% (10 of 44) of all backcountry grizzly bear–inflicted human injuries and fatalities in YNP occurred in the valley even though it comprises only 1% of the park. In addition, 3 of the last 5 fatal bear attacks in the park occurred in the valley. We evaluated retrospectively whether restrictions and closures on visitor recreational activity would have prevented many of these injuries. We considered prohibitions on recreational activity during seasons when bears forage for specific high-quality foods; potential closures that coincided with the times of day and year bears were most active in the valley; and visitor use restrictions that would have prevented the most common human behaviors associated with grizzly bear–caused human injuries. The food-based closure that may have prevented the most human injuries occurred during middle to late summer when bears scavenge bison (Bison bison) carcasses that result from annual rutting behavior of bison in the valley. However, safety precautions such as hiking in groups of >=3, remaining on maintained trails, and carrying bear spray would likely reduce the frequency of bear-inflicted human injuries more than most food-based seasonal closures. Our analyses provide broadly applicable findings regarding use of visitor behavior restrictions and seasonal closures to reduce the risk of bear-inflicted human injuries.
Wyoming↗
Developing an effective Agassiz's Desert Tortoise monitoring program: Final report to the Coachella Valley Conservation Commission
Agassiz’s desert tortoise (Gopherus agassizii) is a conservation-reliant species with populations north and west of the Colorado River protected as threatened under the Endangered Species Act (Averill-Murray et al. 2012). Since it was listed under this category in 1990, a great deal has been learned about the natural history of the species, and it is now one of the best-studied turtles in the United States (Lovich and Ennen 2013). However, the accumulated body of scientific data available for the species has not yet been translated into recovery or delisting of the species. Successful conservation of any species requires knowledge of their natural history and how vital rates affect their ability to maintain stable populations in the face of natural and anthropogenic stresses. Agassiz’s desert tortoises occur from southwestern Utah to near the Mexican border in California – a distance of over 450 km – but population densities vary greatly across this immense landscape (U.S. Fish and Wildlife Service 2015). Tortoises occur in the Sonoran Desert of California, including the eastern and western ends of the Coachella Valley, where it is one of 27 species covered under the Coachella Valley Multiple Species Habitat Conservation Plan and Natural Community Conservation Plan (CVMSHCP/NCCP). The southern portion of Joshua Tree National Park (JTNP) lies within this 1.1 million acre planning area, and was predicted to be an area of low-density tortoise populations using habitat suitability modeling (Barrows 2011). JTNP is near the southern distributional limit of G. agassizii, yet very little has been published regarding the ecology of tortoises in the Sonoran Desert of California. Reproductive output is an important gross measure of the ability of a population to persist. When integrated with data on fertility and survivorship, this information forms a foundation for assessing population status and formulating effective management strategies (e.g., Congdon et al. 1993, 1994), especially for imperiled species. One aspect of the biology of G. agassizii that has been particularly well-studied is reproductive output. However, most of what we know about this topic comes from research in the Mojave Desert portion of the species’ range (Ernst and Lovich 2009). Comparatively little has been published on the reproductive ecology of populations living in the Sonoran Desert ecosystem of California. Publications by Lovich et al. (1999, 2011, 2012, 2014, 2015) constitute the main body of literature on desert tortoise reproductive ecology in the Sonoran Desert of California, with one study population located at the western end of the CVMSHCP/NCCP area. Collecting data on Agassiz’s desert tortoise ecology in the Sonoran Desert ecosystem is important due to significant differences between the two adjacent desert ecosystems, especially the timing and amounts of annual precipitation, and their potential effects on reproductive output (e.g., Lovich et al. 5 2015). There are also differences in the vulnerability of tortoises to the effects of a warming, drying climate between the two deserts (Barrows 2011; Zylstra et al. 2012). The overall goal of this study was to collect data on demography, reproductive output, and genetic affinities at a study site in the Sonoran Desert portion of JTNP in the eastern end of the CVMSHCP/NCCP area. Specific objectives included: 1) Collect data to establish baselines on tortoise populations and/or their habitat suitability in core habitat within the CVNCCP area, including biotic and abiotic variables affecting persistence of tortoise populations; 2) Compare and contrast with data collected on desert tortoises at USGS/BLM study site near Palm Springs over 16 years; 3) Support long-term modeling efforts needed to determine tortoise population viability; 4) Refine modeled relationships with identified threats such as fire, invasive species and climate change; and 5) Prioritize adaptive management needs for the desert tortoise in and beyond the CVNCCP area. The data from this study will aid in determining baseline estimates of the desert tortoise population size within the planning area as well as establish a marked population of Agassiz’s desert tortoises for future monitoring. Data will be integrated with habitat modeling in order to refine model output. Genetic data will be collected on both the north and south sides of Interstate 10 to determine the potential effects of habitat fragmentation and genetic mixing. Analyses are ongoing and results beyond those presented in this report will be published in peer-reviewed scientific journals following inclusion of additional data collected on the south side of Shavers Valley in 2017-2018.
Report↗
The interannual distribution and abundance of lotic invertebrates from five habitats of the Merced River in Yosemite Valley, Yosemite National Park, 1992-1995
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Open-File Report↗
Tracking heat in the Willamette River system, Oregon
The Willamette River Basin in northwestern Oregon is home to several cold-water fish species whose habitat has been altered by the Willamette Valley Project, a system of 13 dams and reservoirs operated by the U.S. Army Corps of Engineers. Water-resource managers use a variety of flow- and temperature-management strategies to ameliorate the effects of upstream Willamette Valley Project dams on the habitat and viability of these anadromous and native fish. In this study, new capabilities were added to the CE-QUAL-W2 two-dimensional flow and water-quality model to inform those flow- and temperature-management strategies by tracking the quantities and ages of water and heat from individual upstream sources to downstream locations in the Willamette River system. Specifically, the fraction of water and heat attributable to upstream dam releases or other water inputs, and the fraction of heat sourced from environmental heat fluxes across the water and sediment surfaces, were tracked and quantified in the river at all locations and times simulated by the model. Applying the updated CE-QUAL-W2 models to the Willamette River system for the months of March through October in the years 2011 (cool and wet), 2015 (hot and dry), and 2016 (warm and somewhat dry) demonstrated that the influence of upstream dam releases on downstream water temperature diminished within a few days as water moved downstream. At sites that are roughly two or more days of travel from upstream dams (Albany and downstream), the July–August fraction of riverine heat content that could be tracked back to upstream dam releases typically diminished to less than 20 percent, despite the fact that roughly 50 percent of July–August streamflow could be attributed to upstream dam releases at the same sites. In contrast, the fraction of riverine heat content that could be attributed to environmental energy fluxes continued to increase with downstream distance, from about 59 to 67 percent at Albany during July–August to 62 to 73 percent at Keizer and 68 to 79 percent at Newberg. At locations sufficiently far downstream, upstream dam releases affect water temperature mainly through a decrease in travel time (less time for environmental heat fluxes to warm the river during summer) and an increase in thermal mass (more water to dilute and buffer incoming heat fluxes) rather than through the simple transport of heat content (water temperature) released from the dams. This concept was explored not only for the baseline conditions that occurred in March–October of 2011, 2015, and 2016, but also for a hypothetical high-flow release during August 2016 and an actual high-flow release during August 2017. In these high-flow releases, an extra 2,500 cubic feet per second (roughly) was released from Dexter Dam on the Middle Fork Willamette River, and downstream effects were measured (2017, actual) and simulated (2016, hypothetical). Results of the simulations were consistent with insights gained from the baseline conditions, such that temperature changes caused by flow augmentation were substantial in upstream reaches (measured cooling of about 1.5 °C near Harrisburg [43 miles downstream] and Albany [84 miles downstream] in 2017, and cooling of about 0.5 °C near Albany in 2016) and diminished farther downstream, but still measurable (more than a few tenths of a degree Celsius) even at Newberg, which is about 154 miles downstream. The direct downstream effects of dam releases on the river heat content attributable to those releases were increased by the hypothetical flow augmentation, with increases of 20 percent at Harrisburg and 12 percent at Keizer. Even with a decreased influence of environmental energy fluxes on river heat content, however, the fraction of heat content attributable to such fluxes was still more than 50 percent at and downstream of Albany and more than 70 percent at Newberg, where the river temperature was less affected by upstream dam-release temperatures and instead was affected primarily by a decreased travel time and increased thermal mass.
Oregon↗
Changes in the abundance and distribution of waterfowl wintering in the Central Valley of California, 1973–2000
The Central Valley of California is one of the most important areas for wintering waterfowl in the world and the focus of extensive conservation efforts to mitigate for historical losses and counter continuing stressors to habitats. To guide conservation, we analyzed trends in the abundance and distribution (spatiotemporal abundance patterns) of waterfowl and their habitats in the Central Valley and its major subregions (Sacramento Valley, Suisun Marsh, Delta, San Joaquin Valley), from 1973 through 2000. We used existing databases, satellite imagery, and aerial photography to measure habitat area, and aerial surveys and radio telemetry to track the abundance and distribution of wintering waterfowl. Wetlands increased throughout the Central Valley, but agricultural fields flooded after harvest increased greatly to the north in the Sacramento Valley and decreased to the south in the San Joaquin Valley, resulting in an overall increase in the relative availability of winter habitat in the former region. Reflecting the continental decline of the most abundant wintering species (Northern Pintail, Anas acuta ), the overall abundance of wintering waterfowl in the Central Valley declined during our study. By contrast, numbers of the American Wigeon ( A. americana ), Mallard ( A. platyrhynchos ), and Northern Shoveler ( A. clypeata ) were stable, and numbers of the Green-winged Teal ( A. crecca ), Gadwall ( A. strepera ), diving ducks, and geese increased from 1973–1982 to 1998–2000. The areas of greatest abundance of wintering waterfowl within the Central Valley shifted northward as many species responded to changes in the distribution of habitats. Wintering waterfowl migrated earlier in fall and winter from the San Joaquin Valley, Suisun Marsh, and Delta to the Sacramento Valley, and fewer waterfowl emigrated from the Sacramento Valley to other parts of the Central Valley. Because changes in waterfowl distribution were primarily a response to the increase of a beneficial agricultural practice (i.e., the flooding of rice after harvest) in the Sacramento Valley, changing agro-economics, reduction of water supplies, or other factors that reduce this practice could change the abundance and distribution of wintering waterfowl in the Central Valley rapidly. Thus to maintain abundant suitable habitat and restore the historical distribution of wintering waterfowl, our results suggest a continuing need for the conservation of wetlands and other waterfowl habitats with secure water supplies throughout the Central Valley. Despite our findings, achieving goals for winter waterfowl populations in the Central Valley likely will depend on a combination of factors including some acting in breeding ranges farther north or elsewhere outside of the valley.
California↗
Sex-related differences in habitat associations of wintering American Kestrels in California's Central Valley
We used roadside survey data collected from 19 routes over three consecutive winters from 2007–08 to 2009–10 to compare habitat associations of male and female American Kestrels ( Falco sparverius ) in the Central Valley of California to determine if segregation by sex was evident across this region. As a species, American Kestrels showed positive associations with alfalfa and other forage crops like hay and winter wheat, as well as grassland, irrigated pasture, and rice. Habitat associations of females were similar, with female densities in all these habitats except rice significantly higher than average. Male American Kestrels showed a positive association only with grassland and were present at densities well below those of females in alfalfa, other forage crops, and grassland. Males were present in higher densities than females in most habitats with negative associations for the species, such as orchards, urbanized areas, and oak savannah. The ratio of females to males for each route was positively correlated with the overall density of American Kestrels on that route. Our findings that females seem to occupy higher quality habitats in winter are consistent with observations from elsewhere in North America.
California↗
Water temperature and availability shape the spatial ecology of a hot springs endemic toad
Desert amphibians are limited to exploiting ephemeral resources and aestivating or to inhabiting scarce refuges of permanent water, such as springs. Understanding how amphibians use these resources is essential for their conservation. Dixie Valley Toads ( Anaxyrus williamsi ) are precinctive to a small system of cold and hot springs in the Dixie Valley, Nevada, USA. The toads have been petitioned for listing under the US Endangered Species Act, and information about how they use terrestrial and aquatic resources will help managers to conserve the toads and identify threats like geothermal energy development that might affect these toads. We used radiotelemetry to study the seasonal home ranges, movements, and habitat associations of Dixie Valley Toads in autumn 2018 and spring 2019. We found that toads were very closely associated with water in both seasons, with most observations occurring in water, especially for males in spring and all toads in the autumn. Even when found in terrestrial habitat, toads were a median distance of 4.2 m (95% credible interval = 3.3–5.3) from water; 95% of the time in spring and autumn, toads were within 14 m of water. Dixie Valley Toad habitat selection indicated a similar pattern, with selection in both spring and autumn for locations closer to water and for warmer water and substrates than at nearby available locations. In autumn, toads also avoided bare ground and terrestrial graminoids. Dixie Valley Toads selected brumation sites in, over (within dense vegetation), or near water, often near springs where water depths and temperatures are likely stable through the winter. The reliance of Dixie Valley Toads on water in spring, autumn, and during brumation suggests that alteration to historical flows and water temperatures are likely to affect the toads. Changes to the hydrothermal environment when toads are brumating could be particularly detrimental, potentially killing inactive toads.
Herpetologica↗
Demographics and movements of least terns and piping plovers in the Central Platte River Valley, Nebraska
The Central Platte River Valley provides breeding habitat for a variety of migratory birds, including federally endangered interior least terns ( Sternula antillarum ; least tern) and threatened piping plovers ( Charadrius melodus ). Since 2009, researchers have collected demographic data on both species that span their lifecycle (that is, from egg laying through survival of adults). Demographic data were used to estimate vital rates (for example, nest survival, chick survival, and so on) for both species and assess how these vital rates were related to type and age of nesting habitat. Nest survival of both species was unrelated to the age of the site a nest was initiated on. Piping plover chick survival to fledging age was not related to the age of the site it was hatched at, however, the probability of a least tern chick surviving to fledging was higher at older sites. In general there were fewer piping plover nests than least tern nests found at sites created through either the physical construction of a new site or new vegetation management regimes, during 2009–14. Mean daily least tern nest survival was 0.9742 (95-percent confidence interval [CI]: 0.9692–0.9783) and cumulative nest survival was 0.59 (95-percent CI: 0.53–0.65). Mean daily least tern chick survival was 0.9602 (95-percent CI: 0.9515–0.9673) and cumulative survival to fledging was 0.54 (95-percent CI = 0.48–0.61). Annual apparent survival rates were estimated at 0.42 (95-percent CI = 0.22–0.64) for adult least terns nesting in the Central Platte River Valley and an apparent survival rate of 0.14 (95-pecent CI = 0.04–0.41) for juvenile least terns. The number of least tern nests present at sites created during 2009–14 was associated with the age of the site; more least tern nests were associated with older sites. During 2009–14, there were four (less than 1 percent of all chicks marked) least tern chicks hatched from the Central Platte River Valley that were subsequently captured on nests as adults. Two of these least terns returned to nest at the same site they had hatched from. Ten instances were documented in which an adult least tern could either switch to nest at a new location or remain at the previous location with the onset of a new year. In five (50 percent) of these instances, least terns returned to nest on the site where they had nested in a previous year. For piping plovers, mean daily apparent nest survival was 0.9880 (95-pecent CI: 0.9836–0.9912) and cumulative nest survival was 0.66 (95-pecent CI: 0.57–0.74). Mean daily piping plover chick survival was 0.9621 (95-pecent CI: 0.9514–0.9706) and cumulative survival to fledging was 0.46 (95-pecent CI = 0.37– 0.56). The annual apparent survival estimate for adult piping plovers nesting in the Central Platte River Valley was 0.76 (95-pecent CI = 0.65–0.85) and was 0.20 (95-pecent CI = 0.14–0.29) for juvenile piping plovers. The number of piping plover nests present at sites created through either the physical construction of a new site or new vegetation management regimes was also associated with site age, with more piping plover nests associated with older sites; however, in general there were fewer piping plover nests found at created sites than least tern nests. Only first-year adult piping plovers were observed on sites in the first year of availability, whereas older sites had a higher proportion of after-first-year adult piping plovers than first-year adult piping plovers. Twelve piping plover chicks (approximately 3 percent of all chicks marked) hatched from the Central Platte River Valley and were subsequently documented on nests as adults. All piping plovers returned to nest on different sites from the one on which they hatched. A total of 45 instances were documented in which an adult plover could either switch to nest at a new location or remain at the previous location with the onset of a new year. In 39 instances (87 percent), the adult nested on the same site as its prior documented nesting attempt and in 6 of these instances the adult switched to a new nesting location between years. There were 13 of 75 uniquely identifiable piping plovers observed to renest (that is, initiate more than one nest in a season) during 2009–14; no renests were observed among uniquely identifiable least terns. In all but one case, piping plover renests were found at the same site as the first nest initiated that season. For birds that renested, the mean initiation date of the first nest was May 6 and the mean initiation date of the second nest was June 8. On average, renests were initiated 7.5 days plus or minus 7.3 (SD [standard deviation]) following the date the initial nesting attempt was ‘fated’ (considered either failed or hatched).
Nebraska↗
Defining population structure and genetic signatures of decline in the giant garter snake ( Thamnophis gigas ): implications for conserving threatened species within highly altered landscapes
Anthropogenic habitat fragmentation can disrupt the ability of species to disperse across landscapes, which can alter the levels and distribution of genetic diversity within populations and negatively impact long-term viability. The giant gartersnake ( Thamnophis gigas ) is a state and federally threatened species that historically occurred in the wetland habitats of California’s Great Central Valley. Despite the loss of 93 % of historic wetlands throughout the Central Valley, giant gartersnakes continue to persist in relatively small, isolated patches of highly modified agricultural wetlands. Gathering information regarding genetic diversity and effective population size represents an essential component for conservation management programs aimed at this species. Previous mitochondrial sequence studies have revealed historical patterns of differentiation, yet little is known about contemporary population structure and diversity. On the basis of 15 microsatellite loci, we estimate population structure and compare indices of genetic diversity among populations spanning seven drainage basins within the Central Valley. We sought to understand how habitat loss may have affected genetic differentiation, genetic diversity and effective population size, and what these patterns suggest in terms of management and restoration actions. We recovered five genetic clusters that were consistent with regional drainage basins, although three northern basins within the Sacramento Valley formed a single genetic cluster. Our results show that northern drainage basin populations have higher connectivity than among central and southern basins populations, and that greater differentiation exists among the more geographically isolated populations in the central and southern portion of the species’ range. Genetic diversity measures among basins were significantly different, and were generally lower in southern basin populations. Levels of inbreeding and evidence of population bottlenecks were detected in about half the populations we sampled, and effective population size estimates were well below recommended minimum thresholds to avoid inbreeding. Efforts focused on maintaining and enhancing existing wetlands to facilitate dispersal between basins and increase local effective population sizes may be critical for these otherwise isolated populations.
Conservation Genetics↗
Space and habitat use by black bears in the Elwha valley prior to dam removal
Dam removal and subsequent restoration of salmon to the Elwha River is expected to cause a shift in nutrient dynamics within the watershed. To document how this influx of nutrients and energy may affect black bear (Ursus americanus) ecology, we used radio-telemetry to record movements of 11 male and two female black bears in the Elwha Valley from 2002-06. Our objective was to collect baseline data on bear movements prior to dam removal. We calculated annual home ranges, described seasonal timing of den entry and emergence, and described seasonal patterns of distribution and habitat use. Adaptive kernel home ranges were larger formales (mean = 151.1 km2, SE = 21.4) than females (mean = 38.8 km2, SE = 13.0). Males ranged widely and frequently left the watershed during late summer. Further, they exhibited predictable and synchronous patterns of elevation change throughout each year. Bears entered their winter dens between 8 October and 15 December and emerged from dens between 10 March and 9 May. Male bears used low-elevation conifer and hardwood forests along the Elwha floodplain during spring, mid- to high-elevation forests and meadows during early summer, high-elevation forests, meadows and shrubs during late summer, and mid-elevation forests, shrubs and meadows during fall. Data acquired during this study provide important baseline information for comparison after dam removal, when bears may alter their late summer and fall movement and denning patterns to take advantage of energy-rich spawning salmon.
Northwest Science↗