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USGS2013

The NAS Alert System: A look at the first eight years

The U.S. Geological Survey's Nonindigenous Aquatic Species (NAS) database program (http://nas.er.usgs.gov) tracks the distribution of introduced aquatic organisms across the United States. Awareness of, and timely response to, novel species introductions by those involved in nonindigenous aquatic species management and research requires a framework for rapid dissemination of occurrence data as it is incorporated into the NAS database. In May 2004, the NAS program developed an alert system to notify registered users of new introductions as part of a national early detection/rapid response system. This article summarizes information on system users and dispatched alerts from the system's inception through the end of 2011. The NAS alert system has registered over 1,700 users, with approximately 800 current subscribers. A total of 1,189 alerts had been transmitted through 2011. More alerts were sent for Florida (134 alerts) than for any other state. Fishes comprise the largest taxonomic group of alerts (440), with mollusks, plants, and crustaceans each containing over 100 alerts. Most alerts were for organisms that were intentionally released (414 alerts), with shipping, escape from captivity, and hitchhiking also representing major vectors. To explore the archive of sent alerts and to register, the search and signup page for the alert system can be found online at http://nas.er.usgs.gov/AlertSystem/default.aspx.

Fisheries↗

USGS1998

North American landscape characterization project: The production of a continental scale three-decade Landsat data set

The North American Landscape Characterization (NALC) project is a component of the National Aeronautics and Space Administration (NASA) Landsat Pathfinder program. Pathfinder projects are focused on the investigation of global change utilizing current remote sensing technologies. The NALC project is a cooperative effort between the U. S. Environmental Protection Agency (EPA), the U.S. Geological Survey (USGS), and NASA to make Landsat data available to the widest possible user community for scientific research and general public interest. The NALC project is principally funded by the EPA Office of Research and Development and the USGS's Earth Resources Observation Systems (EROS) Data Center (EDC). The objectives of the NALC project are to produce standardized remote sensing data sets, develop standardized analysis methods, and derive standardized land cover change products for a large portion of the North American continent (the conterminous United States and Mexico) (Lunetta and Sturdevant, 1993). The standard product is the NALC “triplicate”;, consisting of co‐registered Landsat multispectral scanner data for the years 1973, 1986, and 1991 (plus or minus one year), plus co‐registered 3 arcsecond digital terrain elevation data. Processing began with the 1986 scene, which was precision corrected (with full terrain correction) to a 60 meter Universal Transverse Mercator base. Automated cross‐correlation procedures were used to co‐register the 1970's and 1990's data to the 1980's base, and independent verifications of registration quality were performed on all triplicate components. The pertinent metadata were compiled in a relational database, which includes WRS2 path/rows, scene ID's, image dates, solar azimuth and elevation, verification RMSE's, and the number of verification control points. NALC triplicate data sets are being used for a number of applications, including the analysis of urbanization patterns, dynamics of climatic fluctuations, deforestation studies, and vegetation classification and mapping. These data are being distributed through the Earth Observing System Data and Information System (EOSDIS) Information Management System (IMS) at a cost of $15(U.S.) for each triplicate.

Geocarto International↗

USGS2011

User's manual for the National Water-Quality Assessment Program Invertebrate Data Analysis System (IDAS) software, version 5

The Invertebrate Data Analysis System (IDAS) software was developed to provide an accurate, consistent, and efficient mechanism for analyzing invertebrate data collected as part of the U.S. Geological Survey National Water-Quality Assessment (NAWQA) Program. The IDAS software is a stand-alone program for personal computers that run Microsoft Windows(Registered). It allows users to read data downloaded from the NAWQA Program Biological Transactional Database (Bio-TDB) or to import data from other sources either as Microsoft Excel(Registered) or Microsoft Access(Registered) files. The program consists of five modules: Edit Data, Data Preparation, Calculate Community Metrics, Calculate Diversities and Similarities, and Data Export. The Edit Data module allows the user to subset data on the basis of taxonomy or sample type, extract a random subsample of data, combine or delete data, summarize distributions, resolve ambiguous taxa (see glossary) and conditional/provisional taxa, import non-NAWQA data, and maintain and create files of invertebrate attributes that are used in the calculation of invertebrate metrics. The Data Preparation module allows the user to select the type(s) of sample(s) to process, calculate densities, delete taxa on the basis of laboratory processing notes, delete pupae or terrestrial adults, combine lifestages or keep them separate, select a lowest taxonomic level for analysis, delete rare taxa on the basis of the number of sites where a taxon occurs and (or) the abundance of a taxon in a sample, and resolve taxonomic ambiguities by one of four methods. The Calculate Community Metrics module allows the user to calculate 184 community metrics, including metrics based on organism tolerances, functional feeding groups, and behavior. The Calculate Diversities and Similarities module allows the user to calculate nine diversity and eight similarity indices. The Data Export module allows the user to export data to other software packages (CANOCO, Primer, PC-ORD, MVSP) and produce tables of community data that can be imported into spreadsheet, database, graphics, statistics, and word-processing programs. The IDAS program facilitates the documentation of analyses by keeping a log of the data that are processed, the files that are generated, and the program settings used to process the data. Though the IDAS program was developed to process NAWQA Program invertebrate data downloaded from Bio-TDB, the Edit Data module includes tools that can be used to convert non-NAWQA data into Bio-TDB format. Consequently, the data manipulation, analysis, and export procedures provided by the IDAS program can be used to process data generated outside of the NAWQA Program.

Techniques and Methods↗

USGS2013

Distribution of invasive ants and methods for their control in Hawai'i Volcanoes National Park

The first invasive ants were detected in Hawai`i Volcanoes National Park (HAVO) more than 80 years ago. Ecological impacts of these ants are largely unknown, but studies in Hawai`i and elsewhere increasingly show that invasive ants can reduce abundance and diversity of native arthropod communities as well as disrupt pollination and food webs. Prior to the present study, knowledge of ant distributions in HAVO has primarily been restricted to road- and trail-side surveys of the Kīlauea and Mauna Loa Strip sections of the park. Due to the risks that ants pose to HAVO resources, understanding their distributions and identifying tools to eradicate or control populations of the most aggressive species is an important objective of park managers. We mapped ant distributions in two of the most intensively managed sections of the park, Mauna Loa Strip and Kahuku. We also tested the efficacy of baits to control the Argentine ant ( Linepithema humile ) and the big-headed ant ( Pheidole megacephala ), two of the most aggressive and ecologically destructive species in Hawai`i. Efficacy testing of formicidal bait was designed to provide park managers with options for eradicating small populations or controlling populations that occur at levels beyond which they can be eradicated. Within the Mauna Loa Strip and Kahuku sections of HAVO we conducted systematic surveys of ant distributions at 1625 stations covering nearly 200 km of roads, fences, and transects between August 2008 and April 2010. Overall, 15 ant species were collected in the two areas, with 12 being found on Mauna Loa Strip and 11 at Kahuku. Cardiocondyla kagutsuchi was most widespread at both sites, ranging in elevation from 920 to 2014 m, and was the only species found above 1530 m. Argentine ants and big-headed ants were also found in both areas, but their distributions did not overlap. Surveys of Argentine ants identified areas of infestation covering 560 ha at Mauna Loa Strip and 585 ha at Kahuku. At both sites, upper boundaries of big-headed ants coincided with lower boundaries of Argentine ants. Significantly, Wasmannia auropunctata (little fire ant) was not detected during our surveys. Formicidal baits tested for controlling Argentine ants included Xstinguish TM (containing fipronil at 0.01%), Maxforce ® (hydramethylnon 1.0%), and Australian Distance ® (pyriproxyfen 0.5%). Each bait was distributed evenly over four 2500 m 2 replicate plots. Applications were repeated approximately four weeks after the initial treatment. Plots were subdivided into 25 subplots and ants monitored within each subplot using paper cards containing tuna bait at approximately one week intervals for about 14 weeks. All treatments reduced ant numbers, but none eradicated ants on any of the plots. Xstinguish TM produced a strong and lasting effect, depressing ant abundance below 1% of control plot levels within the first week and for about eight weeks afterward. Maxforce ® was slower to attain maximum effectiveness, reducing ants to 8% of control levels after one week and 3% after six weeks. Australian Distance ® was least effective, decreasing ant abundance to 19% of control levels after one week with numbers subsequently rebounding to 40% of controls at four weeks and 72% at 10 weeks. In measurements of the proportion of bait cards at which ants were detected, Xstinguish TM clearly out-performed Maxforce ® , reaching a minimum detection rate of 3% of bait cards at one week compared to a low of 19% for Maxforce ® two weeks following the second treatment. Although ant abundances were dramatically reduced on Xstinguish TM plots, it is not currently registered for use in the USA. Our results suggest that ant abundance can be greatly reduced using registered baits, but further research is needed before even small-scale eradication of Argentine ants can be achieved. Formicidal baits tested to control big-headed ants included Amdro ® (hydramethylnon 0.75%), Xstinguish TM (fipronil 0.01%), Extinguish ® Plus (a blend of hydramethylnon 0.365% and S- methoprene 0.25%), and Australian Distance ® Plus (hydramethylnon 0.365% and pyriproxyfen 0.25%). Application methods were the same as used for Argentine ants, with baits being applied on two occasions (approximately four weeks apart) on four 2500 m 2 replicate plots. All four baits reduced populations to below 2% of control plot levels within one week of treatment. Amdro ® was particularly effective as no ants were detected on two of the four Amdro ® plots immediately following treatment. Suppression was long-lived in three of the treatments; Amdro ® , Australian Distance ® Plus, and Extinguish ® Plus all maintained ant abundances at levels less than 1% of control plots over 12 weeks of study. In contrast, ant abundances in Xstinguish TM plots rose to 7% of control plots after four weeks and 20% after 10 weeks. Our results corroborate other recent studies indicating that small populations of big-headed ants can be controlled in natural areas using products registered in the USA.

Hawaii↗

USGS2024

Co-registration accuracy between Landsat-8 and Sentinel-2 orthorectified products

Landsat orthorectified products use Ground Control Points (GCPs) and Digital Elevation Models (DEM) to improve the geolocation accuracy and temporal consistency, and to account for the relief displacements due to the sensor-target geometry. In Collection-2, to improve the geometric harmonization between Landsat and Sentinel-2 (S2) orthorectified products, the Landsat GCP's absolute and relative accuracies were improved using the S2 Global Reference Image (GRI) dataset through a continent-level bundle adjustment method. The GRI is a highly accurate global image dataset that was developed by the European Space Agency (ESA) to improve the S2 multi-temporal geolocation accuracy. Since late August 2021, ESA has been using the GRI dataset in the geometric refinement process to generate S2 terrain-corrected (L1C) products. This paper presents the co-registration accuracy between the Landsat-8 (L8) Collection-2 terrain-corrected products and the S2 L1C products that were processed with and without the use of the GRI dataset. The image-to-image registration (I2I) analysis performed between the L8 and S2 data products over a set of globally distributed tiles shows a significant improvement in their co-registration accuracy when GRI is used in the S2 L1C product generation. The co-registration error is estimated to be <6 m circular error at 90% probability (CE90) when GRI is used, and >12 m CE90 when GRI is not used in the S2 product generation process. A similar I2I analysis was conducted between S2 L1C products, L8 L1TP products, and L8 and Landsat 9 (L9) L1TP products. The analysis shows that the S2 L1C products are co-registered with each other temporally to better than 5.1 m CE90 when GRI is used. The L8 L1TP products and L8 versus L9 L1TP products are both co-registered temporally to better than 3 m CE90.

Remote Sensing of Environment↗

USGS2000

A diurnal animation of thermal images from a day-night pair

Interpretation of thermal images is often complicated because the physical property information is contained in both the spatial and temporal variations of the data and thermal models are necessary to extract and display this information. A linearized radiative transfer solution to the surface flux has been used to derive a function that is invariant with respect to thermal inertia. This relationship makes it possible to predict the temperature variation at any time in the diurnal cycle using only two distinct measurements (e.g., noon and midnight). An animation can then be constructed from a pair of day-night images to view both the spatial and temporal temperature changes throughout the diurnal cycle. A more complete solution for the invariant function, using the method of Laplace transforms and based on the linearized solution, was introduced. These results indicate that the linear model does not provide a sufficiently accurate estimate. Using standard conditions (latitude 30??, solar declination 0??, acquisition times at noon and midnight), this new relationship was used to predict temperature throughout the diurnal cycle to an rms error of 0.2??C, which is close to the system noise of most thermal scanners. The method was further extended to include the primary effects of topographic slope with similar accuracy. The temperature was computed at 48 equally spaced times in the diurnal cycle with this algorithm using a co-registered day and night TIMS (Thermal Infrared Multispectral Scanner) data pair (330 pixels, 450 lilies) acquired of the Carlin, Nevada, area and a co-registered DEM (Digital Elevation Model). (Any reader can view the results by downloading the animation file from an identified tip site). The results illustrate the power of animation to display subtle temporal and spatial temperature changes, which can provide clues to structural controls and material property differences. This 'visual change' approach could significantly increase the use of thermal data for environmental, hazard, and resource studies. Published by Elsevier Science Inc., 2000.A linearized radiative transfer solution of determining the surface flux is proposed to predict the temperature variation at any time in the diurnal cycle using only two distinct measurements. An animation is constructed from a pair of day-night images to view the spatial and temporal temperature changes throughout the diurnal cycle. The results illustrate the effectiveness of animation to display subtle temporal and spatial temperature changes, which can provide clues to structural controls and material property differences.

Remote Sensing of Environment↗

USGS2017

Mapping tide-water glacier dynamics in east Greenland using landsat data

Landsat multispectral scanner and thematic mapper images were co-registered For the Kangerdlugssuaq Fjord region in East Greenland and were used to map glacier drainage-basin areas, changes in the positions of tide-water glacier termini and to estimate surface velocities of the larger tide-water glaciers. Statistics were compiled to document distance and area changes to glacier termini. The methodologies developed in this study are broadly applicable to the investigation of tide-water glaciers in other areas. The number of images available for consecutive years and the accuracy with which images are co-registered are key factors that influence the degree to which regional glacier dynamics can be characterized using remotely sensed data. Three domains of glacier state were interpreted: net increase in terminus area in the southern part of the study area, net loss of terminus area for glaciers in upper Kangerdlugssuaq Fjord and a slight loss of glacier terminus area northward from Ryberg Fjord. Local increases in the concentrations of drifting icebergs in the fjords coincide with the observed extension of glacier termini positions Ice-surface velocity estimates were derived for several glaciers using automated image cross-correlation techniques The velocity determined for Kangerdlugssuaq Gletscher is approximately 5.0 km a −1 and that for Kong Christian IV Gletscher is 0.9 km a −1 . The continuous presence of icebergs and brash ice in front of these glaciers indicates sustained rates of ice-front calving.

Journal of Glaciology↗

USGS2001

Anthropogenic nitrogen deposition induces rapid ecological changes in alpine lakes of Colorado Front Range (USA)

Recent sediments from two alpine lakes (> 3300 m asl) in the Colorado Front Range (USA) register marked and near-synchronous changes that are believed to represent ecological responses to enhanced atmospheric deposition of fixed nitrogen from anthropogenic sources. Directional shifts in sediment proxies include greater representations of mesotrophic diatoms and increasingly depleted δ 15 N values. These trends are particularly pronounced since ~ 1950, and appear to chronicle lake responses to excess N derived from agricultural and industrial sources to the east. The rate and magnitude of recent ecological changes far exceed the context of natural variability, as inferred from comparative analyses of a long core capturingthe entire 14,000-year postglacial history of one of the lakes. Nitrogen deposition to these seemingly pristine natural areas has resulted in subtle but detectable limnological changes that likely represent the beginning of a stronger response to nitrogen enrichment.

Journal of Paleolimnology↗

USGS2016

Land-use change reduces habitat suitability for supporting managed honey bee colonies in the Northern Great Plains

Human reliance on insect pollination services continues to increase even as pollinator populations exhibit global declines. Increased commodity crop prices and federal subsidies for biofuel crops, such as corn and soybeans, have contributed to rapid land-use change in the US Northern Great Plains (NGP), changes that may jeopardize habitat for honey bees in a part of the country that supports >40% of the US colony stock. We investigated changes in biofuel crop production and grassland land covers surrounding ∼18,000 registered commercial apiaries in North and South Dakota from 2006 to 2014. We then developed habitat selection models to identify remotely sensed land-cover and land-use features that influence apiary site selection by Dakota beekeepers. Our study demonstrates a continual increase in biofuel crops, totaling 1.2 Mha, around registered apiary locations in North and South Dakota. Such crops were avoided by commercial beekeepers when selecting apiary sites in this region. Furthermore, our analysis reveals how grasslands that beekeepers target when selecting commercial apiary locations are becoming less common in eastern North and South Dakota, changes that may have lasting impact on pollinator conservation efforts. Our study highlights how land-use change in the NGP is altering the landscape in ways that are seemingly less conducive to beekeeping. Our models can be used to guide future conservation efforts highlighted in the US national pollinator health strategy by identifying areas that support high densities of commercial apiaries and that have exhibited significant land-use changes.

North Dakota, South Dakota↗

USGS2013

Radiometric and geometric assessment of data from the RapidEye constellation of satellites

To monitor land surface processes over a wide range of temporal and spatial scales, it is critical to have coordinated observations of the Earth's surface using imagery acquired from multiple spaceborne imaging sensors. The RapidEye (RE) satellite constellation acquires high-resolution satellite images covering the entire globe within a very short period of time by sensors identical in construction and cross-calibrated to each other. To evaluate the RE high-resolution Multi-spectral Imager (MSI) sensor capabilities, a cross-comparison between the RE constellation of sensors was performed first using image statistics based on large common areas observed over pseudo-invariant calibration sites (PICS) by the sensors and, second, by comparing the on-orbit radiometric calibration temporal trending over a large number of calibration sites. For any spectral band, the individual responses measured by the five satellites of the RE constellation were found to differ <2–3% from the average constellation response depending on the method used for evaluation. Geometric assessment was also performed to study the positional accuracy and relative band-to-band (B2B) alignment of the image data sets. The position accuracy was assessed by comparing the RE imagery against high-resolution aerial imagery, while the B2B characterization was performed by registering each band against every other band to ensure that the proper band alignment is provided for an image product. The B2B results indicate that the internal alignments of these five RE bands are in agreement, with bands typically registered to within 0.25 pixels of each other or better.

International Journal of Remote Sensing↗

USGS2015

Quality assurance testing of acoustic doppler current profiler transform matrices

The U.S. Geological Survey (USGS) Hydrologic Instrumentation Facility (HIF) is nationally responsible for the design, testing, evaluation, repair, calibration, warehousing, and distribution of hydrologic instrumentation in use within the USGS Water Mission Area (WMA). The HIF's Hydraulic Laboratory has begun routine quality assurance (QA) testing and documenting the performance of every USGS WMA acoustic Doppler current profiler (ADCP) used for making velocity and discharge measurements. All existing ADCPs are being registered and tracked in a database maintained by the HIF, and called for QA checks in the HIF's Hydraulic Laboratory on a 3- year cycle. All new ADCPs purchased directly from the manufacturer as well as ADCPs sent to the HIF or the manufacturer for repair are being registered and tracked in the database and QA checked in the laboratory before being placed into service. Meters failing the QA check are sent directly to the manufacturer for repairs and rechecked by HIF or removed from service. Although this QA program is specific to the SonTek 1 and Teledyne RD Instruments 1 , ADCPs most commonly used within the WMA, it is the intent of the USGS Office of Surface Water and the HIF to expand this program to include all bottom tracking ADCPs as they become available and more widely used throughout the WMA. As part of the HIF QA process, instruments are inspected for physical damage, the instrument must pass the ADCP diagnostic self-check tests, the temperature probe must be within ± 2 degrees Celsius of a National Institute of Standards and Technology traceable reference thermometer and the distance made good over a fixed distance must meet the manufacturer's specifications (+/-0.25% or +/-1% difference). The transform matrix is tested by conducting distance-made-good (DMG) tests comparing the straight-line distance from bottom tracking to the measured tow-track distance. The DMG test is conducted on each instrument twice in the forward and reverse directions (4 tows) at four orientations (16 total tows); with beam 1 orientated 0 degrees to the towing direction; turned 45 degrees to the towing direction; turned 90 degrees to the towing direction; and turned 135 degrees to the towing direction. All QA data files and summary results are archived. This paper documents methodology, participation and preliminary results of WMA ADCP QA testing.

Conference Paper↗

USGS2009

SSTL UK-DMC SLIM-6 data quality assessment

Satellite data from the Surrey Satellite Technology Limited (SSTL) United Kingdom (UK) Disaster Monitoring Constellation (DMC) were assessed for geometric and radiometric quality. The UK-DMC Surrey Linear Imager 6 (SLIM-6) sensor has a 32-m spatial resolution and a ground swath width of 640 km. The UK-DMC SLIM-6 design consists of a three-band imager with green, red, and near-infrared bands that are set to similar bandpass as Landsat bands 2, 3, and 4. The UK-DMC data consisted of imagery registered to Landsat orthorectified imagery produced from the GeoCover program. Relief displacements within the UK-DMC SLIM-6 imagery were accounted for by using global 1-km digital elevation models available through the Global Land One-km Base Elevation (GLOBE) Project. Positional accuracy and relative band-to-band accuracy were measured. Positional accuracy of the UK-DMC SLIM-6 imagery was assessed by measuring the imagery against digital orthophoto quadrangles (DOQs), which are designed to meet national map accuracy standards at 1 : 24 000 scales; this corresponds to a horizontal root-mean-square accuracy of about 6 m. The UK-DMC SLIM-6 images were typically registered to within 1.0-1.5 pixels to the DOQ mosaic images. Several radiometric artifacts like striping, coherent noise, and flat detector were discovered and studied. Indications are that the SSTL UK-DMC SLIM-6 data have few artifacts and calibration challenges, and these can be adjusted or corrected via calibration and processing algorithms. The cross-calibration of the UK-DMC SLIM-6 and Landsat 7 Enhanced Thematic Mapper Plus was performed using image statistics derived from large common areas observed by the two sensors.

IEEE Transactions on Geoscience and Remote Sensing↗

USGS2010

Monitoring the long term stability of the IRS-P6 AWiFS sensor using the Sonoran and RVPN sites

This paper focuses on radiometric and geometric assessment of the Indian Remote Sensing (IRS-P6) Advanced Wide Field Sensor (AWiFS) sensor using the Sonoran desert and Railroad Valley Playa, Nevada (RVPN) ground sites. Imageto- Image (I2I) accuracy and relative band-to-band (B2B) accuracy were measured. I2I accuracy of the AWiFS imagery was assessed by measuring the imagery against Landsat Global Land Survey (GLS) 2000. The AWiFS images were typically registered to within one pixel to the GLS 2000 mosaic images. The B2B process used the same concepts as the I2I, except instead of a reference image and a search image; the individual bands of a multispectral image are tested against each other. The B2B results showed that all the AWiFS multispectral bands are registered to sub-pixel accuracy. Using the limited amount of scenes available over these ground sites, the reflective bands of AWiFS sensor indicate a long-term drift in the top-of-atmosphere (TOA) reflectance. Because of the limited availability of AWiFS scenes over these ground sites, a comprehensive evaluation of the radiometric stability using these sites is not possible. In order to overcome this limitation, a cross-comparison between AWiFS and Landsat 7 (L7) Enhanced Thematic Mapper Plus (ETM+) was performed using image statistics based on large common areas observed by the sensors within 30 minutes. Regression curves and coefficients of determination for the TOA trends from these sensors were generated to quantify the uncertainty in these relationships and to provide an assessment of the calibration differences between these sensors.

Conference Paper↗

USGS2016

Rediscovery of the 220-year-old holotype of the Banded Iguana, Brachylophus fasciatus (Brongniart, 1800) in the Paris Natural History Museum

The Paris Natural History Museum herpetological collection (MNHN-RA) has seven historical specimens of Brachylophus spp. collected late in the 18th and early in the 19th centuries. Brachylophus fasciatus was described in 1800 by Brongniart but its type was subsequently considered as lost and never present in MNHN-RA collections. We found that 220 year old holotype among existing collections, registered without any data, and we show that it was donated to MNHN-RA from Brongniart’s private collection after his death in 1847. It was registered in the catalogue of 1851 but without any data or reference to its type status. According to the coloration (uncommon midbody saddle-like dorsal banding pattern) and morphometric data given in its original description and in the subsequent examination of the type in 1802 by Daudin and in 1805 by Brongniart we found that lost holotype in the collections. Another MNHN-RA specimen has Horn Islands (Wallis and Futuna) as the collection location but we show that most of the collections given to MNHN-RA by its collector, Louis Arnoux, have mixed localities in the MNHN-RA catalogues. We thus conclude that the locality is wrong and that the species never inhabited those islands located west of Western Samoa and north-east of Fiji.

Zootaxa↗

USGS2021

Land conversion and pesticide use degrade forage areas for honey bees in America’s beekeeping epicenter

A diverse range of threats have been associated with managed bee declines globally. Recent increases of two known threats, land-use change and pesticide use, have resulted from agricultural expansion and intensification notably in the top honey producing state in the United States (U.S.): North Dakota. This study investigated the dual threat from land conversion and pesticide use surrounding ~14,000 registered apiaries in North Dakota from 2001 to 2014. We estimated the annual total insecticide use (kg) on major crops within 1.6 km of apiary sites. Of the eight insecticides, six showed significant increasing trends over the time period. Specifically, applications of the newly established neonicotinoids Chlothianidin, Imidacloprid and Thiamethoxam, increased annually by 1329 kg, 686 kg, 795 kg, respectively. Also, the use of Chlorpyrifos, which was well-established by 2001 and is highly toxic to honey bees, increased by ~8,800 kg annually from 6,500 kg in 2001 to 115,000 kg in 2014 on corn, soybeans and wheat. We further evaluated the relative quality changes of natural/semi-natural land covers surrounding apiaries in 2006, 2010 and 2014, a period of significant increases in cropland area. In areas surrounding apiaries, we observed changes in multiple indices of forage quality that reflect the deteriorating landscape surrounding registered apiary sites due to land-use change and pesticide-use increases. Overall, our results suggest that the application of foliar-applied insecticides, including pyrethroids and one organophosphate, increased surrounding apiaries when the use of neonicotinoid seed treatment surged and the area for producing corn and soybeans expanded. Spatially, these threats were most pronounced in southeastern North Dakota, a region hosting a high density of apiary sites that has recently experienced corn and soybean expansion. Our results highlight the values of natural and semi-natural land covers as sources of pollinator forage and providing refugia for bees against pesticide exposure. Our study provides insights for targeting conservation efforts to improve forage quality for benefiting managed pollinators.

North Dakota↗

USGS2024

Penguin colony georegistration using camera pose estimation and phototourism

Satellite-based remote sensing and uncrewed aerial imagery play increasingly important roles in the mapping of wildlife populations and wildlife habitat, but the availability of imagery has been limited in remote areas. At the same time, ecotourism is a rapidly growing industry and can yield a vast catalog of photographs that could be harnessed for monitoring purposes, but the inherently ad-hoc and unstructured nature of these images make them difficult to use. To help address this, a subfield of computer vision known as phototourism has been developed to leverage a diverse collection of unstructured photographs to reconstruct a georeferenced three-dimensional scene capturing the environment at that location. Here we demonstrate the use of phototourism in an application involving Antarctic penguins, sentinel species whose dynamics are closely tracked as a measure of ecosystem functioning, and introduce a semi-automated pipeline for aligning and registering ground photographs using a digital elevation model (DEM) and satellite imagery. We employ the Segment Anything Model (SAM) for the interactive identification and segmentation of penguin colonies in these photographs. By creating a textured 3D mesh from the DEM and satellite imagery, we estimate camera poses to align ground photographs with the mesh and register the segmented penguin colony area to the mesh, achieving a detailed representation of the colony. Our approach has demonstrated promising performance, though challenges persist due to variations in image quality and the dynamic nature of natural landscapes. Nevertheless, our method offers a straightforward and effective tool for the georegistration of ad-hoc photographs in natural landscapes, with additional applications such as monitoring glacial retreat.

PLoS ONE↗

USGS1987

Comparative efficacy of 16 anesthetic chemicals on rainbow trout

Presently there are no legally registered fish anesthetics that allow for the release of fish or use of the fish for food soon after they have been anesthetized. MS-222 (tricaine), the only anesthetic registered for use on fish in the United States, cannot be used within 21 d of harvesting the fish for food. As the start in a search for an anesthetic that can be used with little or no withdrawal period, we tested the efficacy of 16 chemicals as anesthetics on rainbow trout Salmo gairdneri. Efficacy was defined by the fish (1) becoming handleable (quiet enough to be manipulated and handled readily) in 3 min or less, (2) recovering in 10 min or less, and (3) showing no mortality after 15 min in the anesthetic solution. Four chemicals--MS-222, quinaldine sulfate, benzocaine, and 2-phenoxyethanol--met these criteria for efficacy. Chemicals that yielded excessive induction or recovery times or caused excessive mortality were methylpentynol, chlorobutanol, etomidate, metomidate, Piscaine, propanidid, carbon dioxide, nicotine, salt, Halothane, Metofane, and Biotal. Because carbon dioxide leaves no residues and requires no withdrawal period, it may be an acceptable alternative for fishery workers who can tolerate somewhat shallower anesthesia and longer induction and recovery times.

North American Journal of Fisheries Management↗

USGS1982

Potential secondary hazards of Avitrol baits to sharp-shinned hawks and american kestrels

Avitrol© is the registered trade name of a number of proprietary bird control products containing the active ingredient 4-aminopyridine (4-AP). Several formulations of Avitrol are available to pest control applicators for use in agricultural areas. Although individual treated bait particles contain from 0.5 to 3.0% 4-AP, the amount present in the 14 federally registered products ranges from 0.3 to 1.0%, depending on the proportion of treated to untreated particles in the ready-to-use baits. Individual birds in depredating flocks ingesting 1 or more of the treated particles exhibit erratic behavior which frightens other birds in the flock. Numerous published references are available which describe the use and results of 1 or more of these products under a variety of conditions (Goodhue and Baumgartner 1965, DeGrazio et al. 1972, Stickley et al. 1972, Dolbeer et al. 1976, Stickley et al. 1976, Besser and Guarino 1977, Knittle et al. 1977, Mott 1977, Stick ley et al. 1977, Besser 1978, Woronecki et al. 1979).

Journal of Wildlife Management↗