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Results for “Journal of Morphology”

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At least 55 records · Page 3Linked to original sources
USGS2003

Mitochondrial phylogeography of moose (Alces alces) in North America

Nucleotide variation was assessed from the mitochondrial control region of North American moose ( Alces alces ) to test predictions of a model of range expansion by stepping-stone dispersal and to determine whether patterns of genetic variation support the current recognition of 4 subspecies. Haplotypes formed a star phylogeny indicative of a recent expansion of populations. Values of nucleotide and haplotype diversity were low continentwide but were greatest in the central part of the continent and lowest in peripheral populations. Despite low mitochondrial diversity, moose exhibited a high degree of differentiation regionally, which was not explained by isolation by distance. Our data indicate a pattern of colonization consistent with a large central population that supplied founders to peripheral populations (other than Alaska), perhaps through rare, long-distance dispersal events (leptokurtic dispersal) rather than mass dispersal by a stepping-stone model. The colonization scenario does not account for the low haplotype diversity observed in Alaska, which may be derived from a postcolonization bottleneck. Establishment of peripheral populations by leptokurtic dispersal and subsequent local adaptation may have been sufficient for development of morphological differentiation among extant subspecies.

Journal of Mammalogy↗
USGS2019

Body shape is related to the attempt rate and passage success of brook trout at in-stream barriers

The ability to move between habitats has important implications for fitness in many species. In-stream barriers such as culverts can impede movements of riverine fishes and thus reduce connectivity between habitats. The ability of fish to overcome barriers is related to the features of the environment and the barrier itself, but also to physiological, morphological and behavioural traits of the fish. Among these, body shape varies among and within species, and influences swimming ability, a key component of passage performance through culverts. We conducted an experimental study on wild brook trout ( Salvelinus fontinalis ) to assess the effects of individual body shape on attempt rate and passage success through culverts on six streams. A more streamlined body shape was associated with an increased motivation to enter and ascend the culverts, and, to a lesser extent, with the probability of successful passage once an attempt was staged. Motivation and successful passage were also influenced by the density of conspecifics below the culvert, time of day, fish body size and water velocity. Policy implications. While fish body shape is expected to influence swimming performance, our research shows the most important effect of body shape to be on an individual's motivation to stage passage attempts at culverts. This study points to an important connection between behaviour and morphological traits that influence passage success and suggests that in-stream barriers may be an important agent of selection on behaviour and morphology in wild fish populations.

Journal of Applied Ecology↗
USGS2001

Influence of breeding habitat on bear predation and age at maturity and sexual dimorphism of sockeye salmon populations

Age structure and morphology differ among Pacific salmon ( Oncorhynchus spp.) populations. Sexual selection and reproductive capacity (fecundity and egg size) generally favor large (old), deep-bodied fish. We hypothesized that natural selection from physical access to spawning grounds and size-biased predation by bears, Ursus spp., opposes such large, deep-bodied salmon. Accordingly, size and shape of salmon should vary predictably among spawning habitats. We tested this hypothesis by measuring the age composition and body depth of sockeye salmon, Oncorhynchus nerka , and the intensity of predation in a range of breeding habitats in southwestern Alaska. Stream width was positively correlated with age at maturity and negatively correlated with predation level. However, salmon spawning on lake beaches were not consistently old, indicating that different factors affect age in riverine- and beach-spawning populations. Body depths of male and female salmon were positively correlated with water depth across all sites, as predicted. However, the mouths of some streams were so shallow that they might select against large or deep-bodied salmon, even in the absence of bear predation. Taken together, the results indicated that habitat has direct and indirect effects (via predation) on life history and morphology of mature salmon.

Alaska↗
USGS2008

Gender identification of Caspian Terns using external morphology and discriminant function analysis

Caspian Tern (Sterna caspia) plumage characteristics are sexually monochromatic and gender cannot easily be distinguished in the field without extensive behavioral observations. We assessed sexual size dimorphism and developed a discriminant function to assign gender in Caspian Terns based on external morphology. We collected and measured Caspian Terns in San Francisco Bay, California, and confirmed their gender based on necropsy and genetic analysis. Of the eight morphological measurements we examined, only bill depth at the gonys and head plus bill length differed between males and females with males being larger than females. A discriminant function using both bill depth at the gonys and head plus bill length accurately assigned gender of 83% of terns for which gender was known. We improved the accuracy of our discriminant function to 90% by excluding individuals that had less than a 75% posterior probability of correctly being assigned to gender. Caspian Terns showed little sexual size dimorphism in many morphometries, but our results indicate they can be reliably assigned to gender in the field using two morphological measurements.

Wilson Journal of Ornithology↗
USGS2015

Atypical pit craters on Mars: new insights from THEMIS, CTX and HiRISE observations

More than 100 pit craters in the Tharsis region of Mars exhibit morphologies, diameters and thermal behaviors that diverge from the much larger bowl-shaped pit craters that occur in most regions across Mars. These Atypical Pit Craters (APCs) generally have sharp and distinct rims, vertical or overhanging walls that extend down to their floors, surface diameters of ~50-350 m, and high depth-to-diameter (d/D) ratios that are usually greater than 0.3 (which is an upper-range value for impacts and bowl-shaped pit craters), and can exceed values of 1.8. Observations by the Mars Odyssey THermal Emission Imaging System (THEMIS) show that APC floor temperatures are warmer at night, and fluctuate with much lower diurnal amplitudes than nearby surfaces or adjacent bowl-shaped pit craters. Kīlauea volcano, Hawai'i, hosts pit craters that formed through subsurface collapse into active volcanic dikes, resulting in pits that can appear morphologically analogous to either APCs or bowl-shaped pit craters. Partially-drained dikes are sometimes exposed within the lower walls and floors of these terrestrial APC analogs and can form extensive cave systems with unique microclimates. Similar caves in martian pit craters are of great interest for astrobiology. This study uses new observations by the Mars Reconnaissance Orbiter (MRO) High Resolution Imaging Science Experiment (HiRISE) and Context Camera (CTX) to refine previous work where seven APCs were described from lower-resolution THEMIS visible-wavelength (VIS) observations. Here, we identify locations of 115 APCs, map their distribution across the Tharsis region, characterize their internal morphologies with high-resolution observations, and discuss possible formation mechanisms.

Journal of Geophysical Research↗
USGS1985

An evaluation of condition indices for birds

A Lipid Index, the ratio of fat to fat-free dry weight, is proposed as a measure of fat stores in birds. The estimation of the index from field measurements of live birds is illustrated with data on the sandhill crane ( Grus canadensis) and greater white-fronted goose ( Anser albifrons ). Of the various methods of assessing fat stores, lipid extraction is the most accurate but also the most involved. Water extraction is a simpler laboratory method that provides a good index to fat and can be calibrated to serve as an estimator. Body weight itself is often inadequate as a condition index, but scaling by morphological measurements can markedly improve its value.

Journal of Wildlife Management↗
USGS2014

Catinaster virginianus sp. nov.: A new species of Catinaster from the middle Miocene Mid-Atlantic Coastal Plain

High-resolution analysis of sediments from four coreholes associated with the Chesapeake Bay impact crater has resulted in the identification of a new species, Catinaster virginianus. This species is similar to Catinaster coalitus coalitus, but differs in having a proximal stem. The first occurrence of C. virginianus is in Zone NN5, and is older than any previously identified Catinaster . This species has been identified previously as Catinaster sp. from the Gulf of Mexico and the Carpathian Foredeep and suggests both a global distribution and synchronous stratigraphic range. Morphologic similarities with Discoaster variabilis may suggest a taxonomic relationship to the D. variabilis lineage.

Chesapeake Bay↗
USGS2025

Beach nourishment response and recent morphological evolution of Minnesota Point, Lake Superior

Beach nourishments are a popular nature-based alternative to armoring for shoreline erosion mitigation, but nourishments have been criticized due to their environmental impacts and uncertain sustainability. Monitoring is often nonexistent or insufficient to constrain nourishment longevity and inform the renourishment interval required to maintain shoreline protection. This study uses a combination of topobathymetric surveys, high-resolution satellite-derived shorelines, and coastal engineering analyses to investigate the recent evolution of Minnesota Point and the fate of three beach nourishments constructed adjacent to littoral barriers. We use semi-empirical formulations for sediment compatibility, wave runup, and longshore sediment transport to inform the observed nourishment behavior. Minnesota Point experienced widespread foredune retreat averaging 7±2.8 m from 2009–2019 and 130,000 (70,000–140,000) m 3 of sediment was eroded during this interval. The 2019 nourishment at the Superior Entry was rapidly eroded by strong storms, losing >80% of the added beach width by the following spring. The 2020 and 2021 nourishments at the Duluth Entry retained >80% of the nourishment material at the time of the last topobathymetric survey in the fall of 2022, and satellite-derived shorelines indicate that the beach remained 10 m wider than pre-nourishment conditions at the end of 2023. Modeled longshore transport rates over the period 2009–2022 averaged 11,400 m 3 yr −1 northwestward at the Superior Entry, nearly 3x greater than the 4000 m 3 yr −1 southeastward transport modeled at the Duluth Entry. These observations show that differences in shoreline orientation, littoral sediment supply, and grain size compatibility can lead to contrasting beach nourishment longevities, and this study provides additional measurements of Minnesota Point’s long-term morphological change which can help inform coastal resiliency efforts.

Minnesota, Wisconsin↗
USGS2008

Evolutionary divergence of giant tortoises in Galapagos

The giant tortoises in the Galapagos Archipelago diverge considerably in size, and in shape and other carapace characteristics. The saddleback morphotype is known only from insular faunas lacking large terrestrial predators (i.e. Galapagos and Mauritius) and in Galapagos is associated with xeric habitats where vertical feeding range and vertical reach in agonistic encounters are adaptive. The large domed morphotype is associated with relatively cool, mesic habitats where intraspecific competition for food and other resources may be less intense than in xeric habitats. Other external characteristics that differ between tortoise populations are also correlated with ecological variation. Tortoises have radiated into a mosaic of ecological conditions in the Galapagos but critical data are lacking on the role of genetic and environmental controls on phenotypic variation. Morphological divergence in tortoises is potentially a better indicator of present ecological conditions than of evolutionary relationships.

Galapagos Islands↗
USGS2005

Prevalence and spatial distribution of intraerythrocytic parasite(s) in Puget Sound rockfish (Sebastes emphaeus) from the San Juan Archipelago, Washington (USA)

Two morphologically distinct forms of an intraerythrocytic parasite(s) were detected by microscopic observation of Giemsa-stained blood films in 45.7% of 119 rockfish (Sebastes emphaeus) from the San Juan Archipelago (Washington State, U.S.A.). Infection prevalence for both forms was 53% in males, 44% in females, and 33% in fish of undetermined gender. A binucleate "ring-stage" was present at all 4 geographic sites, with a mean prevalence of 45.7%, while mean prevalence of a larger gamont-like form from the same sites was 5.1%. The relationship of the 2 forms to each other could not be determined. Neither schizogony nor binary fission was evident in any of the infected erythrocytes and the parasites contained no obvious pigment. The possibility of the 2 morphologic forms being 2 distinct species is supported by the observation that no difference in parasitemia was seen in the binucleate form among sites (1.6-1.9%), while parasitemia of the gamont-like form varied significantly among sites, ranging from a high of 4% to a low of 0.1%. Taxonomic status of either form could not be determined at this time based on limited existing morphologic data. ?? American Society of Parasitologists 2005.

Journal of Parasitology↗
USGS2021

Diplotriaena obtusa (Nematoda: Diplotriaenidae) from barn swallows (Hirundo rustica) and cliff swallows (Petrochelidon pyrrhonota) collected during mortality events in the Upper Midwest, USA

Several mortality events involving barn swallows ( Hirundo rustica ) and cliff swallows ( Petrochelidon pyrrhonota ) were reported in the Upper Midwestern states in 2017 and 2018. Barn swallow mortality followed unseasonal cold snaps, with the primary cause of death being emaciation with concurrent air sac nematodiasis. Lesions in cliff swallows were consistent with blunt force trauma from suspected car impacts. Examination of air sac nematodes from both bird species revealed morphological characters consistent with Diplotriaena obtusa . Sequence analysis of the partial 18S rRNA gene indicated the samples clustered with other species in the genus Diplotriaena . These nematodes provide a link between morphological specimens and DNA sequence data for D. obtusa .

Illinois, Minnesota, Nebraska, South Dakota↗
USGS1975

Perched silica minerals on mordenite fiber

Ellipsoidal quartz grains and spherulitic chalcedony are perched on mordenite fibers in geodes from Chihuahua, Mexico. Examination of samples of fibrous mordenite from six additional localities indicated that most mordenites have perched quartz crystals. A linear relationship exists between the Si:Al ratios and the refractive indices of the mordenites. The pH of the mineralizing solutions appears to be the primary factor controlling the presence of perched silica minerals (the lower the pH, the higher the Si:Al ratios and the lower the probability of precipitating quartz). Other factors that may affect the presence of lurched silica minerals are (1) the compactness of the mordenite fibers, (2) the morphology of the fibers, and (3) the concentration of Al, Ca, Na, and K in the mineralizing solutions.

Journal of Research of the U.S. Geological Survey↗
USGS2026

Suspended-sediment and phosphorus response in a fire-affected central Montana headwater catchment

Purpose Eutrophication and nuisance filamentous algal blooms (i.e. Cladophora ) are increasingly common occurrences throughout much of the western United States. Wildfire may be contributing to the frequency and magnitude of algal blooms through excess sediment and nutrient loading to streams and rivers. Our objective was to evaluate the effects the 2021 Woods Creek Fire had on sediment yields and phosphorus (total and bioavailable) partitioning in Camas Creek, a major tributary to the Smith River in Montana where Cladophora are now consistently reaching nuisance levels. Methods We collected water quality samples during snowmelt pulsing events as well as fixed interval sampling using an established U.S. Geological Survey stream gage instrumented with a continuous water quality sonde and an automatic peristaltic pump sampler. Water samples were processed for total phosphorus (TP), sediment-bound bioavailable phosphorus (S-BioP), soluble reactive phosphorus (SRP), and suspended sediment concentrations and were evaluated using linear regression and other nonparametric statistical tests. Continuous turbidity and streamflow were evaluated using hysteresis analysis to determine sediment sourcing and connectivity. Results We found that the Woods Creek Fire did not significantly influence TP and S-BioP in Camas Creek. However, there was a significant increase in SRP and turbidity in both postfire years (2022 and 2023). Hysteresis analysis of 91 delineated events indicated positive (clockwise) hysteresis was the dominant event pattern during the snowmelt period. This may indicate a lower hillslope to channel connectivity, with the major sediment supply originating from the channel and/or riparian areas. Conclusion Results from this study demonstrate the benefits of combining discrete water quality samples with high-frequency turbidity sensors to characterize postfire sediment and phosphorus dynamics. While a lack of postfire response in TP and S-BioP is contrary to many other studies, our findings highlight the role climate and catchment morphology play in attenuating a disturbance effect.

Montana↗
USGS2007

Geographical and climatic limits of needle types of one- and two-needled pinyon pines

Aim: The geographical extent and climatic tolerances of one- and two-needled pinyon pines (Pinus subsect. Cembroides) are the focus of questions in taxonomy, palaeoclimatology and modelling of future distributions. The identification of these pines, traditionally classified by one- versus two-needled fascicles, is complicated by populations with both one- and two-needled fascicles on the same tree, and the description of two more recently described one-needled varieties: the fallax-type and californiarum-type. Because previous studies have suggested correlations between needle anatomy and climate, including anatomical plasticity reflecting annual precipitation, we approached this study at the level of the anatomy of individual pine needles rather than species. Location: Western North America. Methods: We synthesized available and new data from field and herbarium collections of needles to compile maps of their current distributions across western North America. Annual frequencies of needle types were compared with local precipitation histories for some stands. Historical North American climates were modelled on a c. 1-km grid using monthly temperature and precipitation values. A geospatial model (ClimLim), which analyses the effect of climate-modulated physiological and ecosystem processes, was used to rank the importance of seasonal climate variables in limiting the distributions of anatomical needle types. Results: The pinyon needles were classified into four distinct types based upon the number of needles per fascicle, needle thickness and the number of stomatal rows and resin canals. The individual needles fit well into four categories of needle types, whereas some trees exhibit a mixture of two needle types. Trees from central Arizona containing a mixture of Pinus edulis and fallax-type needles increased their percentage of fallax-type needles following dry years. All four needle types occupy broader geographical regions with distinctive precipitation regimes. Pinus monophylla and californiarum-type needles occur in regions with high winter precipitation. Pinus edulis and fallax-type needles are found in regions with high monsoon precipitation. Areas supporting californiarum-type and fallax-type needle distributions are additionally characterized by a more extreme May-June drought. Main conclusions: These pinyon needle types seem to reflect the amount and seasonality of precipitation. The single needle fascicle characterizing the fallax type may be an adaptation to early summer or periodic drought, while the single needle of Pinus monophylla may be an adaptation to summer-autumn drought. Although the needles fit into four distinct categories, the parent trees are sometimes less easily classified, especially near their ancestral Pleistocene ranges in the Mojave and northern Sonoran deserts. The abundance of trees with both one- and two-needled fascicles in the zones between P. monophylla, P. edulis and fallax-type populations suggest that needle fascicle number is an unreliable characteristic for species classification. Disregarding needle fascicle number, the fallax-type needles are nearly identical to P. edulis, supporting Little's (1968) initial classification of these trees as P. edulis var. fallax, while the californiarum-type needles have a distinctive morphology supporting Bailey's (1987) classification of this tree as Pinus californiarum.

Journal of Biogeography↗
USGS2005

Seasonal to interannual morphodynamics along a high-energy dissipative littoral cell

A beach morphology monitoring program was initiated during summer 1997 along the Columbia River littoral cell (CRLC) on the coasts of northwest Oregon and southwest Washington, USA. This field program documents the seasonal through interannual morphological variability of these high-energy dissipative beaches over a variety of spatial scales. Following the installation of a dense network of geodetic control monuments, a nested sampling scheme consisting of cross-shore topographic beach profiles, three-dimensional topographic beach surface maps, nearshore bathymetric surveys, and sediment size distribution analyses was initiated. Beach monitoring is being conducted with state-of-the-art real-time kinematic differential global positioning system survey methods that combine both high accuracy and speed of measurement. Sampling methods resolve variability in beach morphology at alongshore length scales of approximately 10 meters to approximately 100 kilometers and cross-shore length scales of approximately 1 meter to approximately 2 kilometers. During the winter of 1997/1998, coastal change in the US Pacific Northwest was greatly influenced by one of the strongest El Nin??o events on record. Steeper than typical southerly wave angles resulted in alongshore sediment transport gradients and shoreline reorientation on a regional scale. The La Nin??a of 1998/1999, dominated by cross-shore processes associated with the largest recorded wave year in the region, resulted in net beach erosion along much of the littoral cell. The monitoring program successfully documented the morphological response to these interannual forcing anomalies as well as the subsequent beach recovery associated with three consecutive moderate wave years. These morphological observations within the CRLC can be generalized to explain overall system patterns; however, distinct differences in large-scale coastal behavior (e.g., foredune ridge morphology, sandbar morphometrics, and nearshore beach slopes) are not readily explained or understood.

Journal of Coastal Research↗
USGS2008

Groundwater discharge along a channelized Coastal Plain stream

In the Coastal Plain of the southeastern USA, streams have commonly been artificially channelized for flood control and agricultural drainage. However, groundwater discharge along such streams has received relatively little attention. Using a combination of stream- and spring-flow measurements, spring temperature measurements, temperature profiling along the stream-bed, and geologic mapping, we delineated zones of diffuse and focused discharge along Little Bayou Creek, a channelized, first-order perennial stream in western Kentucky. Seasonal variability in groundwater discharge mimics hydraulic-head fluctuations in a nearby monitoring well and spring-discharge fluctuations elsewhere in the region, and is likely to reflect seasonal variability in recharge. Diffuse discharge occurs where the stream is incised into the semi-confined regional gravel aquifer, which is comprised of the Mounds Gravel. Focused discharge occurs upstream where the channel appears to have intersected preferential pathways within the confining unit. Seasonal fluctuations in discharge from individual springs are repressed where piping results in bank collapse. Thereby, focused discharge can contribute to the morphological evolution of the stream channel. ?? 2008 Elsevier B.V. All rights reserved.

Journal of Hydrology↗
USGS2022

Gas hydrate saturation estimates, gas hydrate occurrence, and reservoir characteristics based on well log data from the hydrate-01 stratigraphic test well, Alaska North Slope

The Hydrate-01 Stratigraphic Test Well was drilled at the Kuparuk 7-11-12 site on the Alaska North Slope in December 2018. Sonic log data provide compressional (P) and shear (S) slowness from which we determine gas hydrate saturation ( S gh ) estimates using effective medium theory. The sonic S gh estimates compare favorably with S gh estimated from resistivity and nuclear magnetic resonance (NMR) logs, showing that gas hydrate occupies up to approximately 90% of the pore space in the target reservoir sands. The informally named B1 sand (2294 feet below mean sea level) shows lower V P / V S ratios than the D1 sand (2770 feet below mean sea level), with the lower part of the B1 sand showing lower V P / V S ratios than the upper part of the B1 sand. This corresponds to a stiffer, or more “cemented”, behavior for the lower B1 sand and less cemented behavior for the D1 sand. This trend could be due to differences in the reservoirs themselves or in the gas hydrate morphology or to both factors. We observe that the presence of gas hydrate in the upper B1 sand has greater impact on hydraulic permeability (measurements suggest a greater difference between intrinsic and effective permeability) than in the D1 sand, possibly related to gas hydrate morphology but more likely due simply to higher gas hydrate saturations in the upper B1 sand. Analyses of S gh relative to porosity, shale fraction, and intrinsic permeability show that reservoir quality (as represented by these three metrics) exerts control on gas hydrate saturation. Grain size and mineralogy data show somewhat smaller grains and better sorting in the D1 reservoir relative to the upper B1 reservoir and smaller grains and greater clay fraction in the lower B1 reservoir relative to the other two reservoir zones. Together, these data suggest that reservoir characteristics play a role in the observed V P / V S patterns, but gas hydrate morphology (possibly varying with saturation) must also be considered.

Alaska↗