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At least 55 records · Page 3Linked to original sources

Complex dynamics at the interface between wild and domestic viruses of finfish

Viral traffic occurs readily between wild and domesticated stocks of finfish because aquatic environments have greater connectivity than their terrestrial counterparts and because the global expansion and dynamic nature of intensive aquaculture provide multiple pathways of transmission and unique drivers of virus adaptation. Supported by examples from the literature, we provide reasons why viruses move from wild fish reservoirs to infect domestic fish in aquaculture more readily than 'domestic' viruses move across the interface to infect wild stocks. We also hypothesize that 'wild' viruses moving across the interface to domestic populations of finfish are more frequently associated with disease outbreaks and host switches compared to domestic viruses that cross the interface to infect wild fish.

Current Opinion in Virology↗

A research agenda for the science of actionable knowledge: Drawing from a review of the most misguided to the most enlightened claims in the science-policy interface literature

Linking science with action affords a prime opportunity to leverage greater societal impact from research and increase the use of evidence in decision-making. Success in these areas depends critically upon processes of producing and mobilizing knowledge, as well as supporting and making decisions. For decades, scholars have idealized and described these social processes in different ways, resulting in numerous assumptions that now variously guide engagements at the interface of science and society. We systematically catalog these assumptions based on prior research on the science-policy interface, and further distill them into a set of 26 claims. We then elicit expert perspectives (n = 16) about these claims to assess the extent to which they are accurate or merit further examination. Out of this process, we construct a research agenda to motivate future scientific research on actionable knowledge, prioritizing areas that experts identified as critical gaps in understanding of the science-society interface. The resulting agenda focuses on how to define success, support intermediaries, build trust, and evaluate the importance of consensus and its alternatives – all in the diverse contexts of science-society-decision-making interactions. We further raise questions about the centrality of knowledge in these interactions, discussing how a governance lens might be generative of efforts to support more equitable processes and outcomes. We offer these suggestions with hopes of furthering the science of actionable knowledge as a transdisciplinary area of inquiry.

Environmental Science & Policy↗

210Pb and 210Po, manganese and iron cycling across the O2/H2S interface of a permanently anoxic fjord: Framvaren, Norway

Vertical profiles of dissolved and particulate 201 Po and 210 Pb were measured across the redox transition zone at Station F1 in Framvaren Fjord, Norway. In this fjord, a sharp decrease in pH above the O 2 /H 2 S interface facilitates the aerobic dissolution of MnO 2 . In contrast, Fe(II) concentrations begin to increase only at the O 2 /H 2 S interface depth. Activity profiles reveal that dissolved 210 Po and 210 Pb are sequestered efficiently by particulates in surface waters. As polonium-210 and lead-210 activities descend down into the aerobic manganese reduction (AMR) zone, they are remobilized during the reductive dissolution of the carrier phase oxyhydroxides. Both 210 Po and 210 Pb are highly enriched at the O 2 /H 2 S interface where an active community of microbes, such as anoxygenic phototrophs (e.g., Chromatium, Chlorobium sp.), thrives. The coincident peaks in 210 Po and 210 Pb and microbial biomass suggest a strong biological influence on the behavior of these radionuclides. There is a strong covariance between the vertical distribution of Mn and Pb, indicating that their redox cycling is closely coupled and is likely microbially mediated.

Framveran Fjord↗

Cycling of mercury across the sediment-water interface in seepage lakes: Chapter 13, Advances in Chemistry

The magnitude and direction of Hg fluxes across the sediment—water interface were estimated by groundwater, dry bulk sediment, sediment pore water, sediment trap, and water-column analyses in two northern Wisconsin seepage lakes. Little Rock Lake (Treatment Basin) received no groundwater discharge during the study period (1988—1990), and Follette Lake received continuous groundwater discharge. In Little Rock Lake, settling of particulate matter accounted for the major Hg delivery mechanism to the sediment—water interface. Upward diffusion of Hg from sediment pore waters below 2—4-cm sediment depth was apparently a minor source during summer stratification. Time-series comparisons suggested that the observed buildup of Hg in the hypolimnion of Little Rock Lake was attributable to dissolution and diffusion of Hg from recently fallen particulate matter close to the sediment—water interface. Groundwater inflow represented an important source of new Hg, and groundwater outflow accounted for significant removal of Hg from Pallette Lake. Equilibrium speciation calculations revealed that association of Hg with organic matter may control solubility in well-oxygenated waters, whereas in anoxic environments sulfur (polysulfide and bisulfide) complexation governs dissolved total Hg levels.

Wisconsin↗

Advancing techniques to constrain the geometry of the seismic rupture plane on subduction interfaces a priori: Higher-order functional fits

Ongoing developments in earthquake source inversions incorporate nonplanar fault geometries as inputs to the inversion process, improving previous approaches that relied solely on planar fault surfaces. This evolution motivates advancing the existing framework for constraining fault geometry, particularly in subduction zones where plate boundary surfaces that host highly hazardous earthquakes are clearly nonplanar. Here, we improve upon the existing framework for the constraint of the seismic rupture plane of subduction interfaces by incorporating active seismic and seafloor sediment thickness data with existing independent data sets and inverting for the most probable nonplanar subduction geometry. Constraining the rupture interface a priori with independent geological and seismological information reduces the uncertainty in the derived earthquake source inversion parameters over models that rely on simpler assumptions, such as the moment tensor inferred fault plane. Examples are shown for a number of wellconstrained global locations. We expand the coverage of previous analyses to a more uniform global data set and show that even in areas of sparse data this approach is able to accurately constrain the approximate subduction geometry, particularly when aided with the addition of data from local active seismic surveys. In addition, we show an example of the integration of many two-dimensional profiles into a threedimensional surface for the Sunda subduction zone and introduce the development of a new global threedimensional subduction interface model: Slab1.0. ?? 2009 by the American Geophysical Union.

Geochemistry, Geophysics, Geosystems↗

Monitoring of Selected Water-Quality Constituents Near the Freshwater/Saline-Water Interface of the Edwards Aquifer, July 1996-December 1997

The Edwards aquifer is the sole source of water for about 1.3 million people in and near San Antonio, Texas, as well as for ranchers and farmers throughout south-central Texas. Because of the demand for this resource, various studies have been conducted to better understand the Edwards aquifer and how the aquifer reacts to environmental changes and human influences. In July 1996, the U.S. Geological Survey (USGS), in cooperation with the Edwards Aquifer Research and Data Center (EARDC) at Southwest Texas State University (SWTSU) and the Texas Water Development Board (TWDB), began a study to investigate possible changes in water quality of the Edwards aquifer near the freshwater/saline-water interface that might result if drought occurs. The continuing study is part of the USGS National WaterQuality Assessment (NAWQA) Program in south-central Texas. The freshwater/saline-water interface, known locally as the “bad-water line,” marks the beginning of the transition in the aquifer from freshwater (updip) to saline water (downdip). The interface is defined as the 1,000-milligram-per-liter (mg/L) line of equal dissolved solids concentration as delineated by Maclay and others (1980, fig. 7). Water in the freshwater zone of the Edwards aquifer tends to have dissolved solids concentrations of 250 to 300 mg/L (Pavlicek and others, 1987, p. 3). In contrast, water in the saline-water zone of the Edwards aquifer commonly has dissolved solids concentrations greater than 10,000 mg/L, and sample concentrations as large as 232,000 mg/L have been measured (Groschen and Buszka, 1997, p. 21).

Fact Sheet↗

Graphical user interface for accessing water-quality data for the Devils Lake basin, North Dakota

Maintaining the quality of surface waters in the Devils Lake Basin in North Dakota is important for protecting the agricultural resources, fisheries, waterfowl and wildlife habitat, and recreational value of the basin. The U.S. Geological Survey, in cooperation with local, State, and Federal agencies, has collected and analyzed water-quality samples from streams and lakes in the basin since 1957, and the North Dakota Department of Health has collected and analyzed water-quality samples from lakes in the basin since 2001. Because water-quality data for the basin are important for numerous reasons, a graphical user interface was developed to access, view, and download the historical data for the basin. The interface is a web-based application that is available to the public and includes data through water year 2003. The interface will be updated periodically to include data for subsequent years.

Open-File Report↗

Internet-based interface for STRMDEPL08

The core of the computer program STRMDEPL08 that estimates streamflow depletion by a pumping well with one of four analytical solutions was re-written in the Javascript software language and made available through an internet-based interface (web page). In the internet-based interface, the user enters data for one of the four analytical solutions, Glover and Balmer (1954), Hantush (1965), Hunt (1999), and Hunt (2003), and the solution is run for constant pumping for a desired number of simulation days. Results are returned in tabular form to the user. For intermittent pumping, the interface allows the user to request that the header information for an input file for the stand-alone executable STRMDEPL08 be created. The user would add the pumping information to this header information and run the STRMDEPL08 executable that is available for download through the U.S. Geological Survey. Results for the internet-based and stand-alone versions of STRMDEPL08 are shown to match.

Open-File Report↗

Description and User Manual for a Web-Based Interface to a Transit-Loss Accounting Program for Monument and Fountain Creeks, El Paso and Pueblo Counties, Colorado

The U.S. Geological Survey, in cooperation with Colorado Springs Utilities, the Colorado Water Conservation Board, and the El Paso County Water Authority, began a study in 2004 with the following objectives: (1) Apply a stream-aquifer model to Monument Creek, (2) use the results of the modeling to develop a transit-loss accounting program for Monument Creek, (3) revise an existing accounting program for Fountain Creek to easily incorporate ongoing and future changes in management of return flows of reusable water, and (4) integrate the two accounting programs into a single program and develop a Web-based interface to the integrated program that incorporates simple and reliable data entry that is automated to the fullest extent possible. This report describes the results of completing objectives (2), (3), and (4) of that study. The accounting program for Monument Creek was developed first by (1) using the existing accounting program for Fountain Creek as a prototype, (2) incorporating the transit-loss results from a stream-aquifer modeling analysis of Monument Creek, and (3) developing new output reports. The capabilities of the existing accounting program for Fountain Creek then were incorporated into the program for Monument Creek and the output reports were expanded to include Fountain Creek. A Web-based interface to the new transit-loss accounting program then was developed that provided automated data entry. An integrated system of 34 nodes and 33 subreaches was integrated by combining the independent node and subreach systems used in the previously completed stream-aquifer modeling studies for the Monument and Fountain Creek reaches. Important operational criteria that were implemented in the new transit-loss accounting program for Monument and Fountain Creeks included the following: (1) Retain all the reusable water-management capabilities incorporated into the existing accounting program for Fountain Creek; (2) enable daily accounting and transit-loss computations for a variable number of reusable return flows discharged into Monument Creek at selected locations; (3) enable diversion of all or a part of a reusable return flow at any selected node for purposes of storage in off-stream reservoirs or other similar types of reusable water management; (4) and provide flexibility in the accounting program to change the number of return-flow entities, the locations at which the return flows discharge into Monument or Fountain Creeks, or the locations to which the return flows are delivered. The primary component of the Web-based interface is a data-entry form that displays data stored in the accounting program input file; the data-entry form allows for entry and modification of new data, which then is rewritten to the input file. When the data-entry form is displayed, up-to-date discharge data for each station are automatically computed and entered on the data-entry form. Data for native return flows, reusable return flows, reusable return flow diversions, and native diversions also are entered automatically or manually, if needed. In computing the estimated quantities of reusable return flow and the associated transit losses, the accounting program uses two sets of computations. The first set of computations is made between any two adjacent streamflow-gaging stations (termed 'stream-segment loop'); the primary purpose of the stream-segment loop is to estimate the loss or gain in native discharge between the two adjacent streamflow-gaging stations. The second set of computations is made between any two adjacent nodes (termed 'subreach loop'); the actual transit-loss computations are made in the subreach loop, using the result from the stream-segment loop. The stream-segment loop is completed for a stream segment, and then the subreach loop is completed for each subreach within the segment. When the subreach loop is completed for all subreaches within a stream segment, the stream-segment loop is initiated for the ne

Scientific Investigations Report↗

Altitude of the freshwater-saltwater interface in a regionally extensive coastal plain aquifer of Mississippi, Alabama, and Georgia

Geophysical well logs from over 150 oil test and water wells in Mississippi, Alabama, and Georgia were examined and calculations of the dissolved solids concentration in ground water were made using the spontaneous potential deflection as a measure of ionic activity. The values derived from these calculations were used to prepare a map showing the altitude relative to sea level at which the concentration of dissolved solids in the groundwater reached 10,000 mg/L within a regionally extensive aquifer in Mississippi, Alabama, and Georgia. A dissolved solids concentration of 10,000 mg/L is used to delineate the interface between moderately saline and saline water; 10,000 mg/L dissolved solids was designated to delineate the freshwater-saltwater interface. For a finite difference computer flow model being used this interface represents the location where horizontal flow of freshwater is greatly diminished. 10 ,000 mg/L also is the lower limit for dissolved solids concentrations for water in target zones for injection wells. This 10,000 mg/L dissolved solids line is of value as a water quality indicator; although water containing 3,000 to 10,000 mg/L or more of dissolved solids is too saline for agricultural use (upper limit approximately 3,000 mg/L), it may be useful for some industrial purposes. Waters containing dissolved solids concentrations > 10,000 mg/L have little potential for any use involving human activities. (Lantz-PTT)

Alabama, Georgia, Mississippi↗

Configuration of freshwater/saline-water interface and geologic controls on distribution of freshwater in a regional aquifer system, central lower peninsula of Michigan

Electrical-resistivity logs and water-quality data were used to delineate the fresh water/saline-water interface in a 22,000-square-mile area of the central Michigan Basin, where Mississippian and younger geologic units form a regional system of aquifers and confining units. Pleistocene glacial deposits in the central Lower Peninsula of Michigan contain freshwater, except in a 1,600-square-mile area within the Saginaw Lowlands, where these deposits typically contain saline water. Pennsylvanian and Mississippian sandstones are freshwater bearing where they subcrop below permeable Pleistocene glacial deposits. Down regional dip from subcrop areas, salinity of ground water progressively increases in Early Pennsylvanian and Mississippian sandstones, and these units contain brine in the central part of the basin. Freshwater is present in Late Pennsylvanian sandstones in the northern and southern parts of the aquifer system. Typically, saline water is present in Pennsylvanian sandstones in the eastern and western parts of the aquifer system. Relief on the freshwater/saline-water interface is about 500 feet. Altitudes of the interface are low (300 to 400 feet above sea level) along a north-south-trending corridor through the approximate center of the area mapped. In isolated areas in the northern and western parts of the aquifer system, the altitude of the base of freshwater is less than 400 feet, but altitude is typically more than 400 feet. In the southern and northern parts of the aquifer system where Pennsylvanian rocks are thin or absent, altitudes of the base of freshwater range from 700 to 800 feet and from 500 to 700 feet above sea level, respectively. Geologic controls on distribution of freshwater in the regional aquifer system are (1) direct hydraulic connection of sandstone aquifers and freshwater-bearing, permeable glacial deposits, (2) impedance of upward discharge of saline water from sandstones by lodgement tills, (3) impedance of recharge of freshwater to bedrock (or discharge of saline water from bedrock) by Jurassic red beds, and (4) vertical barriers to ground-water flow within and between sandstone units.

Michigan↗

PHREEQCI: A graphical user interface for the geochemical computer program PHREEQC

PhreeqcI is a Windows-based graphical user interface for the geochemical computer program PHREEQC. PhreeqcI provides the capability to generate and edit input data files, run simulations, and view text files containing simulation results, all within the framework of a single interface. PHREEQC is a multipurpose geochemical program that can perform speciation, inverse, reaction-path, and 1D advective reaction-transport modeling. Interactive access to all of the capabilities of PHREEQC is available with PhreeqcI. The interface is written in Visual Basic and will run on personal computers under the Windows(3.1), Windows95, and WindowsNT operating systems.

Water-Resources Investigations Report↗

Eradication of peste des petits ruminants and the wildlife-livestock interface

Growing evidence suggests that multiple wildlife species can be infected with peste des petits ruminants virus (PPRV), with important consequences for the potential maintenance of PPRV in communities of susceptible hosts, and the threat that PPRV may pose to the conservation of wildlife populations and resilience of ecosystems. Significant knowledge gaps in the epidemiology of PPRV across the ruminant community (wildlife and domestic), and the understanding of infection in wildlife and other atypical host species groups (e.g., camelidae, suidae, and bovinae) hinder our ability to apply necessary integrated disease control and management interventions at the wildlife-livestock interface. Similarly, knowledge gaps limit the inclusion of wildlife in the FAO/OIE Global Strategy for the Control and Eradication of PPR, and the framework of activities in the PPR Global Eradication Programme that lays the foundation for eradicating PPR through national and regional efforts. This article reports on the first international meeting on, “Controlling PPR at the livestock-wildlife interface,” held in Rome, Italy, March 27–29, 2019. A large group representing national and international institutions discussed recent advances in our understanding of PPRV in wildlife, identified knowledge gaps and research priorities, and formulated recommendations. The need for a better understanding of PPRV epidemiology at the wildlife-livestock interface to support the integration of wildlife into PPR eradication efforts was highlighted by meeting participants along with the reminder that PPR eradication and wildlife conservation need not be viewed as competing priorities, but instead constitute two requisites of healthy socio-ecological systems.

Frontiers in Veterinary Science↗

Streamflow forecasting using the modular modeling system and an object-user interface

The U.S. Geological Survey (USGS), in cooperation with the Bureau of Reclamation (BOR), developed a computer program to provide a general framework needed to couple disparate environmental resource models and to manage the necessary data. The Object-User Interface (OUI) is a map-based interface for models and modeling data. It provides a common interface to run hydrologic models and acquire, browse, organize, and select spatial and temporal data. One application is to assist river managers in utilizing streamflow forecasts generated with the Precipitation-Runoff Modeling System running in the Modular Modeling System (MMS), a distributed-parameter watershed model, and the National Weather Service Extended Streamflow Prediction (ESP) methodology.

Conference Paper↗

Development of a graphical user interface for the global land information system (GLIS)

The process of developing a Motif Graphical User Interface for the Global Land Information System (GLIS) involved incorporating user requirements, in-house visual and functional design requirements, and Open Software Foundation (OSF) Motif style guide standards. Motif user interface windows have been developed using the software to support Motif window functions war written using the C programming language. The GLIS architecture was modified to support multiple servers and remote handlers running the X Window System by forming a network of servers and handlers connected by TCP/IP communications. In April 1993, prior to release the GLIS graphical user interface and system architecture modifications were test by developers and users located at the EROS Data Center and 11 beta test sites across the country.

Pecora 12 Symposium↗

Delineation of the freshwater-saltwater interface on southwestern Long Island, New York, through use of surface and borehole geophysical methods

The U.S. Geological Survey used surface and borehole geophysical methods to delineate the freshwater-saltwater interface in coastal plain aquifers along the southwestern part of Long Island, New York. Over pumping of groundwater in the early 20th century combined with freshwater-saltwater interfaces at the coastline created saltwater intrusion in the upper glacial, Jameco, Magothy, and Lloyd aquifers. Our research indicates extensive saltwater intrusion of the Lloyd aquifer along the southwestern coast of Long Island, N.Y. Several public-supply wells in the southern parts of Nassau, Queens, and Kings Counties have been adversely affected by saltwater intrusion causing several supply wells to be shut down and abandoned. In 2015–17, the U.S. Geological Survey collected time domain electromagnetic soundings at 12 locations and borehole electromagnetic induction conductivity logs at 9 outpost wells within the study area to delineate several saltwater intrusion wedges. Three separate wedges , (shallow, intermediate, and deep), of saltwater intrusion were delineated in the upper glacial, Jameco, and Magothy aquifer complex. In addition, reanalysis of geophysical logs collected in an open borehole of a test well in southern Queens County in 1989 revealed the Lloyd aquifer was nearly completely intruded by saltwater with an estimated chloride concentration of 15,000 milligrams per liter. This suggests the freshwater-saltwater interface was at the coastline and not miles offshore as theorized by previous studies.

New York↗

Navigating the science-policy interface

As a wildlife population ecologist who wants to conduct useful science, I find the Endangered Species Act (ESA), like other federal wildlife statutes, an intriguing read. The topic is in my wheelhouse—fish, wildlife, and plants, with a focus at the population and species levels. There is an emphasis on science, in fact, the “best scientific and commercial data available.” And there are intriguing questions: what threats does a species face? What habitat would be critical for its survival? Could any federal actions put the species or critical habitat in greater peril? I am not alone in this attraction. Hundreds of scientists continue to consider the types of scientific analysis suggested by the ESA. The enthusiasm is palpable. If the first cursory read of the ESA is intriguing to me as a scientist, the second close read is tantalizing—I realize that something very attractive is just out of reach. I know how to estimate the probability of extinction, but I do not know what “in danger of extinction” means. I know how to evaluate the incremental change in status that might arise from some level of proposed take, but I do not know what “is not likely to jeopardize the continued existence” of a species means. The standards expressed in the statute are not stated in purely scientific terms. Thus, ESA decisions cannot be based solely on science, and require additional policy interpretation. Clarity about these policy interpretations—even awareness that they are needed—can be hard to find, leaving a gap between what I can provide as a scientist and what an ESA decision maker needs. This awareness of the interaction between science and policy is also occurring in the larger field of conservation science, where there has been an increasing recognition of a research-implementation gap, the need for actionable science, and the promise of translational ecology. All of these terms emphasize that science alone does not result in action; instead, action arises out of decisions that are informed both by science and by values. At the interface of science and policy, a scientist can deliver relevant knowledge, and a decision maker can explain the policy context in which that science is needed. As a scientist wanting to conduct useful science, I crave this two-way conversation. But how can this conversation be structured in a meaningful and appropriate way? In this chapter, I explore how decision analysis can be used to navigate the science-policy interface for ESA decisions. Decision analysis is a large, well-established field that studies how decisions are made and how they could be made, with explicit attention given to clarifying and separating the values-based and science-based elements of a decision; identifying the impediments that make a decision difficult; and providing tools to overcome those impediments. There have been concerted efforts to apply formal decision analysis to ESA decisions, but the practice is not yet widespread across both the U.S. Fish and Wildlife Service and the National Marine Fisheries Service (the Services). The chapter begins with an introduction to decision analysis and how it seeks to bridge the science-policy interface. In subsequent sections, I explore how a decision analyst might frame listing and reclassification decisions, recovery planning, section 7 consultation, budget allocations, and a few other ESA decisions, with an emphasis on two questions: for each type of decision, what policy clarifications does the decision maker need to make; and knowing the policy context, what type of scientific assessment is needed. In the final discussion, I identify common themes among the types of decisions, and offer thoughts on how decision analysis could be more widely used to integrate science into ESA decisions.

Book chapter↗

An Alaska-Aleutian subduction zone interface earthquake recurrence model from geology and geodesy

We present an earthquake recurrence model for the subduction interface of the Alaska–Aleutian subduction zone from geodetic and paleoseismic data. To capture variations in rupture behavior along strike, we define fault sections based on geodetic coupling, prehistoric earthquake and tsunami recurrence, historical ruptures, and geologic and geophysical structure. In the 1964 M w 9.2 rupture area, which spans four fault sections, recurrence rates for section participation in presumed great ( M w 8.5+) events vary from ∼600 years (Prince William Sound section) to ∼380 years (Kodiak section), geodetic character varies substantially along strike, and geologic evidence indicates that rupture patches vary in space and time. Westward along the Semidi section, the recurrence of large, tsunamigenic ruptures is more frequent (∼220 years) based on geologic and geodetic data than previously assumed. The seismic potential of the Shumagin section, an area of low coupling, remains enigmatic despite a large ( M w 7.8) rupture in 2020. Prehistoric tsunami data indicate that inundation recurrence in the Fox Islands is ∼210 years. Paleoseismic data are lacking west of the Fox Islands, so rupture rates along the western 1900 km of the subduction interface to Komandorski are inferred from geodetic constraints.

Alaska↗