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At least 55 records · Page 3Linked to original sources
USGS2026

Current and near-future conditions of aquatic spatial data for use in ecological models in the United States

To address increasing demand for ecological models of aquatic species that can inform the management of national freshwater resources, we leveraged manager input to develop suites of environmental data layers characterizing freshwater habitats for the contiguous United States. Using the National Hydrography Dataset, these new data cover lentic and lotic systems under current and near-future environmental conditions. The data include a variety of covariate categories including climate, soil chemistry, land use and land cover, and human modification of the surrounding landscape. The predictor resolution for atmospheric climate predictors was the lake (wetland) or stream reach, and, for the terrestrial proxies, the subwatershed (HUC12) surrounding the lake or stream reach was chosen to capture the relevant land features surrounding the habitat. Future land use, land cover and streamflow predictions were included from present to mid-century. These data are available for the development of freshwater ecological models in the contiguous United States for a variety of applications, including species distribution modeling and exploring change in spatially diverse aquatic systems in time.

contiguous United States↗
USGS2016

A global review of freshwater crayfish temperature tolerance, preference, and optimal growth

Conservation efforts, environmental planning, and management must account for ongoing ecosystem alteration due to a changing climate, introduced species, and shifting land use. This type of management can be facilitated by an understanding of the thermal ecology of aquatic organisms. However, information on thermal ecology for entire taxonomic groups is rarely compiled or summarized, and reviews of the science can facilitate its advancement. Crayfish are one of the most globally threatened taxa, and ongoing declines and extirpation could have serious consequences on aquatic ecosystem function due to their significant biomass and ecosystem roles. Our goal was to review the literature on thermal ecology for freshwater crayfish worldwide, with emphasis on studies that estimated temperature tolerance, temperature preference, or optimal growth. We also explored relationships between temperature metrics and species distributions. We located 56 studies containing information for at least one of those three metrics, which covered approximately 6 % of extant crayfish species worldwide. Information on one or more metrics existed for all 3 genera of Astacidae, 4 of the 12 genera of Cambaridae, and 3 of the 15 genera of Parastacidae. Investigations employed numerous methodological approaches for estimating these parameters, which restricts comparisons among and within species. The only statistically significant relationship we observed between a temperature metric and species range was a negative linear relationship between absolute latitude and optimal growth temperature. We recommend expansion of studies examining the thermal ecology of freshwater crayfish and identify and discuss methodological approaches that can improve standardization and comparability among studies.

Reviews in Fish Biology and Fisheries↗
USGS2022

Eastern Ecological Science Center — Fish and aquatic animal health

Science provided by the U.S. Geological Survey (USGS) Eastern Ecological Science Center (EESC) helps to protect fish and aquatic animal health and support disease management of our Nation’s fisheries and aquatic animal populations. Our capabilities and expertise span diverse, yet highly integrated disciplines related to all aspects of biology, ecology, and animal health. Our scientists work to identify novel and emerging pathogens and diseases to assess fish and aquatic animal responses to parasites, pathogens, adverse environmental conditions, and chemical exposures. Eastern Ecological Science Center research is conducted both in laboratories and in the field in various aquatic environments ranging from headwater streams to the ocean. The EESC team provides science leadership and support for fisheries and aquatic species specialists nationwide.

Fact Sheet↗
USGS2015

Terrestrial ecology of semi-aquatic giant gartersnakes ( Thamnophis gigas )

Wetlands are a vital component of habitat for semiaquatic herpetofauna, but for most species adjacent terrestrial habitats are also essential. We examined the use of terrestrial environments by Giant Gartersnakes (Thamnophis gigas) to provide behavioral information relevant to conservation of this state and federally listed threatened species. We used radio telemetry data collected 1995–2011 from adults at several sites throughout the Sacramento Valley, California, USA, to examine Giant Gartersnake use of the terrestrial environment. We found Giant Gartersnakes in terrestrial environments more than half the time during the summer, with the use of terrestrial habitats increasing to nearly 100% during brumation. While in terrestrial habitats, we found Giant Gartersnakes underground more than half the time in the early afternoon during summer, and the probability of being underground increased to nearly 100% of the time at all hours during brumation. Extreme temperatures also increased the probability that we would find Giant Gartersnakes underground. Under most conditions, we found Giant Gartersnakes to be within 10 m of water at 95% of observations. For females during brumation and individuals that we found underground, however, the average individual had a 10% probability of being located > 20 m from water. Individual variation in each of the response variables was extensive; therefore, predicting the behavior of an individual was fraught with uncertainty. Nonetheless, our estimates provide resource managers with valuable information about the importance of protecting and carefully managing terrestrial habitats for conserving a rare semiaquatic snake.

Herpetological Conservation and Biology↗
USGS2010

Southeast Ecological Science Center

Aquatic ecosystems, from deep sea reefs and coastal marshes to freshwater springs and wetlands, are home to diverse assemblages of life. These commercially and ecologically important systems are part of our national heritage, and are often treasured places or refuges that protect rare or threatened species. In the water-rich Southeastern United States, managers face the challenge of understanding how water and land use affect the region's aquatic life. The Southeast Ecological Science Center (SESC) helps address that challenge by providing objective science that can be used to evaluate proposed actions and develop management strategies.

Fact Sheet↗
USGS1995

Aquatic communities and contaminants in fish from streams of the Red River of the North basin, Minnesota and North Dakota

Available data on the ecology of aquatic organisms in the Red River of the North Basin, a study unit of the U.S. Geological Survey's National Water-Quality Assessment program, were collated from numerous sources. Lack of information for invertebrates and algae precluded a general summary of distribution and ecology throughout the basin. Data on fish species distributions in the major streams of the Red River of the North Basin were analyzed based on the drainage area of the stream and the number of ecoregions the stream flowed through. Species richness increased with both drainage area (log drainage area in square kilometers, R 2 =0.41, p=0.0055) and the number of ecoregions a river flowed through. However, theses two factors are autocorrelated because the larger the drainage, the more likely that the river will flow through more than one ecoregion. A cluster analysis identified five river groups based on similarity of species within the fish community. Analysis of trophic and taxonomic composition provided justification for the cluster groups. There were significant differences (p=0.05) in the trophic composition of the river cluster groups with respect to the number of predator species, omnivore species, benthic insectivore species, and general insectivore species. Although there were no significant differences in the number of species in the bass and sunfish family or the sucker family, the number of species in the minnow family and the darter subfamily were different (p=0.05) among the groups identified by cluster analysis. Data on contaminant concentrations in fish from the Red River of the North indicated that most trace elements and organochlorine compounds present in tissues were not at levels toxic to fish or humans. Minnesota and North Dakota have issued a fish consumption advisory based on levels of mercury and (or) PCBs found in some species.

Minnesota, North Dakota, South Dakota↗
USGS2023

Ecology and ecosystem impacts of submerged and floating aquatic vegetation in the Sacramento-San Joaquin Delta

Substantial increases in non-native aquatic vegetation have occurred in the upper San Francisco Estuary over the last 2 decades, largely from the explosive growth of a few submerged and floating aquatic plant species. Some of these species act as ecosystem engineers by creating conditions that favor their further growth and expansion as well as by modifying habitat for other organisms. Over the last decade, numerous studies have investigated patterns of expansion and turn-over of aquatic vegetation species; effects of vegetation on ecosystem health, water quality, and habitat; and effects of particular species or communities on physical processes such as carbon and sediment dynamics. Taking a synthetic approach to evaluate what has been learned over the last few years has shed light on just how significant aquatic plant species and communities are to ecosystems in the Sacramento-San Joaquin Delta. Aquatic vegetation affects every aspect of the physical and biotic environment, acting as ecosystem engineers on the landscape. Furthermore, their effects are constantly changing across space and time, leaving many unanswered questions about the full effects of aquatic vegetation on Delta ecosystems and what future effects may result, as species shift in distribution and new species are introduced. Remaining knowledge gaps underlie our understanding of aquatic macrophyte effects on Delta ecosystems, including their roles and relationships with respect to nutrients and nutrient cycling, evapotranspiration and water budgets, carbon and sediment, and emerging effects on fish species and their habitats. This paper explores our current understanding of submerged and floating aquatic vegetation (SAV and FAV) ecology with respect to major aquatic plant communities, observed patterns of change, interactions between aquatic vegetation and the physical environment, and how these factors affect ecosystem services and disservices within the upper San Francisco Estuary.

California↗
USGS2010

Ecological assessment of selenium in the aquatic environment

Based on the work and contributions of 46 scientists, managers, and policymakers, Ecological Assessment of Selenium in the Aquatic Environment documents the state of the science and explores how to use this information when assessing and managing the environmental effects of Se. A focused discussion on the fate and effects of Se in aquatic ecosystem.

Book↗
USGS2026

The Great Lakes aquatic tissue analysis repository (GLATAR)

Empiricists and modellers use information on energy density, proximate composition, stable isotopes, fatty acids, thiamine, and bioaccumulative tracers (e.g., PCBs and mercury) to understand the state and inter-relationships of aquatic food webs. Data exist in many published and unpublished sources, but are not consolidated in an easily accessible database that would serve as a vital resource to i) provide basic estimates of these diet-derived measures of body composition, ii) understand sources of variation in the underlying data, iii) facilitate exploration and development of data proxies, and iv) assist in study design. We designed GLATAR (Great Lakes Aquatic Tissue Analysis Repository, glatar.org ) to address this need. GLATAR is an open-access, searchable database linked to a web-based toolbox to visualise and generate user-defined summaries on diet-derived ecological metrics, with a focus on taxa of importance to the Great Lakes. GLATAR currently contains over 50,000 records on energy density, chemical tracers, and proximate body composition from 67 species of fish and 72 invertebrate taxa. We hope this user-friendly interface will entice others to upload their published and unpublished data to the repository, enriching the breadth of data accessible to researchers. In this way, GLATAR will become a ‘living’ and interactive resource for empiricists and modellers working in freshwater ecosystems as they make critical decisions related to growth, production, and consumption across a diverse group of economically and ecologically important aquatic species.

Journal of Great Lakes Research↗
USGS2012

Low-level copper exposures increase visibility and vulnerability of juvenile coho salmon to cutthroat trout predators

Copper contamination in surface waters is common in watersheds with mining activities or agricultural, industrial, commercial, and residential human land uses. This widespread pollutant is neurotoxic to the chemosensory systems of fish and other aquatic species. Among Pacific salmonids (Oncorhynchus spp.), copper-induced olfactory impairment has previously been shown to disrupt behaviors reliant on a functioning sense of smell. For juvenile coho salmon (O. kisutch), this includes predator avoidance behaviors triggered by a chemical alarm cue (conspecific skin extract). However, the survival consequences of this sublethal neurobehavioral toxicity have not been explored. In the present study juvenile coho were exposed to low levels of dissolved copper (5-20 microg/L for 3 h) and then presented with cues signaling the proximity of a predator. Unexposed coho showed a sharp reduction in swimming activity in response to both conspecific skin extract and the upstream presence of a cutthroat trout predator (O. clarki clarki) previously fed juvenile coho. This alarm response was absent in prey fish that were exposed to copper. Moreover, cutthroat trout were more effective predators on copper-exposed coho during predation trials, as measured by attack latency, survival time, and capture success rate. The shift in predator-prey dynamics was similar when predators and prey were co-exposed to copper. Overall, we show that copper-exposed coho are unresponsive to their chemosensory environment, unprepared to evade nearby predators, and significantly less likely to survive an attack sequence. Our findings contribute to a growing understanding of how common environmental contaminants alter the chemical ecology of aquatic communities.

Ecological Applications↗
USGS2006

Distribution and ecology of Dreissena polymorpha (pallas) and Dreissena bugensis (andrusov) in the upper Volga basin

This paper presents data on contemporary distribution patterns of two species of Dreissenidae, the zebra mussel (Dreissena polymorpha) and the Quagga mussel (Dreissena bugensis), and their role in ecosystem processes in the Ivan'kovo, Uglich, Rybinsk, and Gorky Reservoirs of the Upper Volga River basin. The role of zebra mussel was also studied in experimental mesocosms of 15 m3. Maximum abundance and species diversity of macroinvertebrates, especially of leeches, polychaetes, crustaceans, and heterotopic insects, were attained in the portions of reservoirs where Dreissenidae were present and in experimental mesocosms where zebra mussel biomass was the highest. In the mesocosm studies, the presence of zebra mussel druses (colonies) provided shelter for macroinvertebrates, reducing their vulnerability to predation by perch (Perca fluviatills) larvae and yearlings, thereby increasing macroinvertebrate species diversity. It was shown that in addition to its role in aquatic biocenosis (ecological community) formation and water purification, Dreissenidae are important food objects for benthophagous fishes, especially roach (Rutilus rutilus). Examination of intestines of benthophagous fishes showed that the length of Dreissenidae ranged from 5 to 20 mm in roach; from 4 to 14 mm in silver bream (Blicca bjoerkna), and from 2 to 10 mm in bream (Abramis brama). The largest mussels consumed were Quagga mussels up to 30 mm, noted in the predatory cyprinid, ide (Leuciscus idus). Copyright ?? 2006 by ASTM International.

Journal of ASTM International↗
USGS2005

Invertebrate eggs can fly: Evidence of waterfowl-mediated gene flow in aquatic invertebrates

Waterfowl often have been assumed to disperse freshwater aquatic organisms between isolated wetlands, but no one has analyzed the impact of this transport on the population structure of aquatic organisms. For three cladocerans (Daphnia ambigua, Daphnia laevis, and Sida crystallina) and one bryozoan (Cristatella mucedo), we estimated the genetic distances between populations across North America using sequences of several mitochondrial DNA genes and genotypic frequencies at allozyme and microsatellite loci. Waterfowl movements across North America (estimated from band recovery data) explained a significant proportion of the gene flow occurring between populations across the continent for three of the four species, even after controlling for geographic distances between localities. The fourth species, S. crystallina, has propagules less likely to survive desiccation or ingestion by birds. Differences in the capacity to exploit bird-mediated transport are likely to have important consequences for the ecology of aquatic communities and the spread of invasive species.

American Naturalist↗
USGS2005

Multiple hypotheses testing of fish incidence patterns in an urbanized ecosystem

Ecological and evolutionary theories have focused traditionally on natural processes with little attempt to incorporate anthropogenic influences despite the fact that humans are such an integral part of virtually all ecosystems. A series of alternate models that incorporated anthropogenic factors and traditional ecological mechanisms of invasion to account for fish incidence patterns in urban lakes was tested. The models were based on fish biology, human intervention, and habitat characteristics. However, the only models to account for empirical patterns were those that included fish invasiveness, which incorporated species-specific information about overall tolerance and fecundity. This suggests that species-specific characteristics are more important in general distributional patterns than human-mediated dispersal. Better information of illegal stocking activities is needed to improve human-mediated models, and more insight into basic life history of ubiquitous species is needed to truly understand underlying mechanisms of biotic homogenization. ?? Springer 2005.

Aquatic Ecology↗
USGS2018

A biodynamic understanding of dietborne and waterborne Ag uptake from Ag NPs in the sediment-dwelling oligochaete, Tubifex tubifex

Metal nanoparticles (Me-NPs) are increasingly used in various products, such as inks and cosmetics, enhancing the likelihood of their release into aquatic environments. An understanding of the mechanisms controlling their bioaccumulation and ecotoxicity in aquatic biota will help support environmental risk assessment. Here we characterized unidirectional parameters for uptake and elimination of silver (Ag) in the sediment-dwelling oligochaete Tubifex tubifex after waterborne (0.01–47 nmol Ag/L) and dietborne (0.4–482 nmol Ag/g dw sed.) exposures to Ag NPs and AgNO 3 , respectively. Worms accumulated Ag from AgNO 3 more efficiently than from Ag NPs during waterborne exposure. The Ag uptake rate constants from water were 8.2 L/g/d for AgNO 3 and 0.34 L/g/d for Ag NPs. Silver accumulated from both forms was efficiently retained in tissues, as no significant loss of Ag was detected after up to 20 days of depuration in clean media. High mortality (~50%) during depuration (i.e. after 17 days) was only observed for worms exposed to waterborne AgNO 3 (3 nmol/L). Sediment exposures to both Ag forms resulted in low accumulation, i.e., the uptake rate constants were 0.002 and 0.005 g/g/d for AgNO 3 and Ag NPs, respectively. Avoidance was only observed for worms exposed to sediment amended with AgNO 3 . Incorporation of the estimated rate constants into a biodynamic model predicted that sediment is likely the most important route of uptake for Ag in both forms in ecologically relevant aquatic environments. However, inference of bioavailability from our estimations of Ag assimilation efficiencies (AE) suggests that Ag (AE: 3–12% for AgNO 3 and 0.1–0.8% for Ag NPs) is weakly bioavailable from sediment for this species. Thus, Ag amended to sediment as NPs might not pose greater problems than 'conventional' Ag for benthic organisms such as T. tubifex .

NanoImpact↗
USGS2026

The global proliferation of aquatic, benthic Microcoleus : Taxonomy, distribution, toxin production, ecology, and future directions

There have been sporadic reports of aquatic, benthic Microcoleus proliferations in freshwater rivers, lakes, and reservoirs for four decades, with reports increasing in frequency over the last twenty years, suggesting a possible rise in their global distribution, frequency, and intensity. Microcoleus can produce anatoxins which are neurotoxic, and ingestion of toxic mats has caused hundreds of dog fatalities and raised serious human and ecological health concerns. This review synthesizes and evaluates current knowledge on Microcoleus distribution, taxonomy, toxin production, toxicity, ecology, environmental drivers, and biotic interactions. Toxin-producing Microcoleus have been reported in at least 18 countries, though many regions have not conducted toxin testing, suggesting a broader but under-reported distribution. Proliferations occur across diverse habitats, including cobble-bedded streams, large sandy rivers, reservoirs, and lakes. Microcoleus proliferations also occur on macrophytes, both in lakes and rivers. Genomic analyses currently classify anatoxin-producing Microcoleus into distinct species, with all known anatoxin-producers isolated from freshwater ecosystems. Anatoxin concentrations vary widely over space and time, within and among waterbodies. While studies on environmental drivers remain limited, research in cobble-bedded rivers suggests that moderate enrichment of dissolved inorganic nitrogen and low dissolved reactive phosphorus concentrations in the water column promote proliferation. Metagenomic approaches have revealed unique nutrient acquisition and storage strategies used by Microcoleus . Key knowledge gaps remain around the environmental and ecological triggers of proliferation, toxin production, genomic diversity and microbial interactions. Addressing these gaps through coordinated, global studies using robust datasets and consistent methods is critical to improve prediction, monitoring, and mitigation of this increasingly widespread public and ecological health threat.

Water Research↗
USGS2016

Ecology of nonnative Siberian prawn ( Palaemon modestus ) in the lower Snake River, Washington, USA

We assessed the abundance, distribution, and ecology of the nonnative Siberian prawn Palaemon modestus in the lower Snake River, Washington, USA. Analysis of prawn passage abundance at three Snake River dams showed that populations are growing at exponential rates, especially at Little Goose Dam where over 464,000 prawns were collected in 2015. Monthly beam trawling during 2011–2013 provided information on prawn abundance and distribution in Lower Granite and Little Goose Reservoirs. Zero-inflated regression predicted that the probability of prawn presence increased with decreasing water velocity and increasing depth. Negative binomial models predicted higher catch rates of prawns in deeper water and in closer proximity to dams. Temporally, prawn densities decreased slightly in the summer, likely due to the mortality of older individuals, and then increased in autumn and winter with the emergence and recruitment of young of the year. Seasonal length frequencies showed that distinct juvenile and adult size classes exist throughout the year, suggesting prawns live from 1 to 2 years and may be able to reproduce multiple times during their life. Most juvenile prawns become reproductive adults in 1 year, and peak reproduction occurs from late July through October. Mean fecundity (189 eggs) and reproductive output (11.9 %) are similar to that in their native range. The current use of deep habitats by prawns likely makes them unavailable to most predators in the reservoirs. The distribution and role of Siberian prawns in the lower Snake River food web will probably continue to change as the population grows and warrants continued monitoring and investigation.

Washington↗
USGS2025

Meta-analysis of a megafish: Assessing patterns and predictors of Alligator Gar movement across multiple populations

Background Freshwater megafishes are among some of the most commercially and ecologically important aquatic organisms yet are disproportionately threatened with range and population reduction. Anthropogenic alterations of rivers influencing migrations are among the most significant causes for these declines. However, migratory fishes do not always respond similarly to movement barriers and thus it is necessary to develop models to predict movements of freshwater migratory fishes in the face of anthropogenic alteration. Predicting movement of freshwater fishes is often investigated using statistical packages. However, empirical studies assessing these packages have led to mixed results, questioning its applicability to all taxa. We argue that spatial, temporal, and environmental attributes are more influential for movement of a migratory megafish, the Alligator Gar ( Atractosteus spatula ), than the current parameters explored in a globally relevant fish movement model. Methods This study explored two independent mobile telemetry datasets investigating Alligator Gar movement on the Brazos and Trinity rivers. Environmental associations were investigated to predict Alligator Gar displacement and dispersal using generalized additive models, generalized linear models, and model selection. Leptokurtosis of Alligator Gar populations was also assessed. Predictability of the movement model was tested by comparing observed to model derived stationary and mobile components making up a leptokurtic movement distribution. Results Our study suggests that current and antecedent measures of discharge and water temperature are positively correlated with Alligator Gar displacement and dispersal. However, these patterns are only detectable when monthly relocation intervals are explored rather than seasonal scales. Leptokurtosis was observed in both Alligator Gar populations. However, movement was normally distributed (i.e., mesokurtic) under tracking events following high flood pulses. Additionally, predicted Alligator Gar movement was significantly farther under modeled values compared to observed values, in part because the species undergoes cyclical migrations for reproduction that are sensitive to water temperature and discharge. Discussion In conclusion, this study provides an alternative framework to assess the movement patterns of migratory fishes, which could be tested on additional freshwater fishes, and suggests that assessing spatial, environmental, and temporal processes simultaneously are necessary to capture the complexities of fish movement which currently are unavailable for the movement model we investigated.

Texas↗
USGS2021

Export of photolabile and photoprimable dissolved organic carbon from the Connecticut River

Dissolved organic carbon (DOC) impacts water quality, the carbon cycle, and the ecology of aquatic systems. Understanding what controls DOC is therefore critical for improving large-scale models and best management practices for aquatic ecosystems. The two main processes of DOC transformation and removal, photochemical and microbial DOC degradation, work in tandem to modify and remineralize DOC within natural waters. Here, we examined both the photo- and microbial remineralization of DOC (photolability and biolability), and the indirect phototransformation of DOC into biolabile DOC (photoprimed biolability) for samples that capture the spatiotemporal and hydrological gradients of the Connecticut River watershed. The majority of DOC exported from this temperate watershed was photolabile and the concentration of photolabile DOC correlated with UV absorbance at 254 nm ( r 2 = 0.86). Phototransformation of DOC also increased biolability, and the total photolabile DOC (sum of photolabile and photoprimed biolabile DOC) showed a stronger correlation with UV absorbance at 254 nm (r 2 = 0.92). We estimate that as much as 49% (SD = 3.3%) and 10% (SD = 1.1%) of annual DOC export from the Connecticut River is directly photolabile and photoprimable, respectively. Thus, 2.82 Gg C year −1 (SD = 0.67 Gg C year −1 ) or 1.13 Mg C km −2 year −1 (SD = 0.27 km −2 year −1 ) of total photolabile DOC escapes photochemical degradation within the river network to be exported from the Connecticut River each year.

Connecticut River↗