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USGS2008

Model-data fusion in studies of the terrestrial carbon sink

Current uncertainty in quantifying the global carbon budget remains a major contributing source of uncertainty in reliably projecting future climate change. Furthermore, quantifying the global carbon budget and characterising uncertainties have emerged as critical to a successful implementation of the United Nations Framework Convention on Climate Change and its Kyoto Protocol. Beyond fundamental quantification, attribution of the processes responsible for the so-called ‘residual terrestrial uptake’ is important to the carbon cycle communities' ability to simulate the future response of the terrestrial biosphere to climate change and intentional sequestration activities. The objective of this chapter is to describe the approaches to model-data fusion enabling continued advances in quantifying carbon cycling and the terrestrial mechanisms at work. The major impediments to advances in this field include accounting for climate variability and uncertainties in model outcomes. One proposed solution to overcome these obstacles is the use of data from the FLUXNET network to characterise the relative strength of climate impact on plant productivity and respiration. Other solutions involve the use of atmospheric CO 2 concentration measurements for model validation and the use of remote sensing data.

Book chapter↗

USGS2009

Improving conceptual models of water and carbon transfer through peat

Northern peatlands store 500 × 10 15 g of organic carbon and are very sensitive to climate change. There is a strong conceptual model of sources, sinks, and pathways of carbon within peatlands, but challenges remain both in understanding the hydrogeology and the linkages between carbon cycling and peat pore water flow. In this chapter, research findings from the glacial Lake Agassiz peatlands are used to develop a conceptual framework for peatland hydrogeology and identify four challenges related to northern peatlands yet to be addressed: (1) develop a better understanding of the extent and net impact of climate-driven groundwater flushing in peatlands; (2) quantify the complexities of heterogeneity on pore water flow and, in particular, reconcile contradictions between peatland hydrogeologic interpretations and isotopic data; (3) understand the hydrogeologic implications of free-phase methane production, entrapment, and release in peatlands; and (4) quantify the impact of arctic and subarctic warming on peatland hydrogeology and its linkage to carbon cycling.

Book chapter↗

USGS2016

Deserts

The deserts of California (Lead photo, Fig. 1) occupy approximately 38% of California’s landscape (Table 1) and consist of three distinct deserts: the Great Basin Desert, Mojave Desert, and Colorado Desert, the latter of which is a subdivision of the Sonoran Desert (Brown and Lowe 1980). The wide range of climates and geology found within each of these deserts result in very different vegetative communities and ecosystem processes and therefore different ecosystem services. In deserts, extreme conditions such as very high and low temperatures and very low rainfall result in abiotic factors (climate, geology, geomorphology, and soils) controlling the composition and function of ecosystems, including plant and animal distributions. This is in contrast to wetter and milder temperatures found in other ecosystems, where biotic interactions are the dominant driving force. However, despite the harsh conditions in deserts, they are home to a surprisingly large number of plants and animals. Deserts are also places where organisms display a wide array of adaptations to the extremes they encounter, providing some of the best examples of Darwinian selection (MacMahon and Wagner 1985, Ward 2009). Humans have utilized these regions for thousands of years, despite the relatively low productivity and harsh climates of these landscapes. Unlike much of California, most of these desert lands have received little high-intensity use since European settlement, leaving large areas relatively undisturbed. Desert landscapes are being altered, however, by the introduction of fire following the recent invasion of Mediterranean annual grasses. As most native plants are not fire-adapted, they Many do not recover, whereas the non-native grasses flourish. Because desert lands are slow to recover from disturbances, energy exploration and development, recreational use, and urban development will alter these landscapes for many years to come. This chapter provides a brief description of where the different deserts of California are located and their dominant vegetative communities. The abiotic factors that define these deserts and how these factors control vegetation and thus animal distribution among and within the various deserts are examined next. Following this section, ecosystem processes and iconic species of these deserts are discussed, followed by a concluding section on the future of these landscapes. The latter section will be mostly focused on the Mojave Desert, as it is both the largest California desert and also where most of the research on California deserts has occurred.

California↗

USGS2011

Upper Cretaceous bituminous coal deposits of the Olmos Formation, Maverick County, Texas

This report describes the bituminous coal deposits of the Olmos Formation (Navarro Group, Upper Cretaceous; Figures 1, 2) of Maverick County in south Texas. Although these were not evaluated quantitatively as part of the current Gulf Coastal Plain coal-resource assessment, a detailed review is presented in this chapter. Prior to the late 1920s, these coal beds were mined underground on a large scale in the vicinity of Eagle Pass, Texas (Figure 1). Since the 1970s, Olmos Formation coals have been mined extensively in both underground and surface mines in nearby Coahuila, Mexico, to supply mine-mouth fuel for power generation at a plant nearby. A tract northeast of Eagle Pass was permitted in the late 1990s for surface mining. In east-central Maverick County, a coalbed methane field is being developed in coal beds of the lower part of the Olmos Formation (Barker et al., 2002; Scott, 2003).

Texas↗

USGS2015

From bacteria to elephants: Effects of land-use legacies on biodiversity and ecosystem structure in the Serengeti-Mara ecosystem: Chapter 8

Generally, ecological research has considered the aboveground and belowground components of ecosystems separately. Consequently, frameworks for integrating the two components are not well developed. Integrating the microbial components into ecosystem ecology requires different approaches from those offered by plant ecology, partly because of the scales at which microbial processes operate and partly because of measurement constraints. Studies have begun to relate microbial community structure to ecosystem function. results suggest that excluding people and livestock from the MMNR, or preventing heavier livestock from grazing around settlements, may not change the general structure of the ecosystem (soils, plant structure), but can change the numbers and diversity of wildlife, nematodes and microbes in this ecosystem in subtle ways.

Book chapter↗

USGS2007

Interferometric synthetic-aperature radar (InSAR): Chapter 5

Geodesists are, for the most part, a patient and hardworking lot. A day spent hiking to a distant peak, hours spent waiting for clouds to clear a line-of-sight between observation points, weeks spent moving methodically along a level line – such is the normal pulse of the geodetic profession. The fruits of such labors are all the more precious because they are so scarce. A good day spent with an electronic distance meter (EDM) or level typically produces fewer than a dozen data points. A year of tiltmeter output sampled at ten-minute intervals constitutes less than half a megabyte of data. All of the leveling data ever collected at Yellowstone Caldera fit comfortably on a single PC diskette. These quantities are trivial by modern data-storage standards, in spite of the considerable efforts expended to produce them.

Book chapter↗

USGS2011

Scenarios for coastal vulnerability assessment

Coastal vulnerability assessments tend to focus mainly on climate change and especially on sea-level rise. Assessment of the influence of nonclimatic environmental change or socioeconomic change is less well developed and these drivers are often completely ignored. Given that the most profound coastal changes of the twentieth century due to nonclimate drivers are likely to continue through the twenty-first century, this is a major omission. It may result in not only overstating the importance of climate change but also overlooking significant interactions of climate change and other drivers. To support the development of policies relating to climate change and coastal management, integrated assessments of climatic change in coastal areas are required, including the effects of all the relevant drivers. This chapter explores the development of scenarios (or "plausible futures") of relevant climate and nonclimate drivers that can be used for coastal analysis, with an emphasis on the nonclimate drivers. It shows the importance of analyzing the impacts of climate change and sea-level rise in a broader context of coastal change and all its drivers. This will improve the analysis of impacts, key vulnerabilities, and adaptation needs and, hence, inform climate and coastal policy. Stakeholder engagement is important in the development of scenarios, and the underlying assumptions need to be explicit, transparent, and open to scientific debate concerning their uncertainties/realism and likelihood.

Book chapter↗

USGS2017

Chemical tracer methods

Tracers have a wide variety of uses in hydrologic studies: providing quantitative or qualitative estimates of recharge, identifying sources of recharge, providing information on velocities and travel times of water movement, assessing the importance of preferential flow paths, providing information on hydrodynamic dispersion, and providing data for calibration of water flow and solute-transport models (Walker, 1998; Cook and Herczeg, 2000; Scanlon et al ., 2002b). Tracers generally are ions, isotopes, or gases that move with water and that can be detected in the atmosphere, in surface waters, and in the subsurface. Heat also is transported by water; therefore, temperatures can be used to trace water movement. This chapter focuses on the use of chemical and isotopic tracers in the subsurface to estimate recharge. Tracer use in surface-water studies to determine groundwater discharge to streams is addressed in Chapter 4; the use of temperature as a tracer is described in Chapter 8. Following the nomenclature of Scanlon et al . (2002b), tracers are grouped into three categories: natural environmental tracers, historical tracers, and applied tracers. Natural environmental tracers are those that are transported to or created within the atmosphere under natural processes; these tracers are carried to the Earth’s surface as wet or dry atmospheric deposition. The most commonly used natural environmental tracer is chloride (Cl) (Allison and Hughes, 1978). Ocean water, through the process of evaporation, is the primary source of atmospheric Cl. Other tracers in this category include chlorine-36 ( 36 Cl) and tritium ( 3 H); these two isotopes are produced naturally in the Earth’s atmosphere; however, there are additional anthropogenic sources of them.

Book chapter↗

USGS2014

Identifying objectives and alternative actions to frame a decision problem.

In this chapter, we discuss the role of objectives and alternative actions in framing a natural resource management decision problem, with particular attention to thresholds. We outline a number of considerations in developing objectives and measurable attributes, including when utility thresholds may be needed to express the decision-makers’ values.We also discuss the development of a set of alternative actions, and how these might give rise to decision thresholds, particularly when the predictive models contain ecological thresholds. Framing of a decision problem plays a central role in decision analysis because it helps determine the needs for a predictive ecological model, the type of solution method required, and the value and structure of a monitoring system.

Book chapter↗

USGS2009

Evaluation of methods and uncertainties in the chemical budgets

This chapter examines the uncertainties inherent in the water and chemical budgets of the lake in relation to the differences between chemical mass change in storage and to the balance between solute inputs and solute outputs associated with water fluxes. It begins by discussing uncertainty in the water budgets used to determine chemical budgets. It then examines uncertainties in chemical analyses of precipitation samples, surface water samples, and groundwater samples. It also discusses alternative approaches to determining chemical budgets. It describes the methods used to calculate chemical mass input from the tributaries, chemical mass loss by surface outflow, chemical mass input from groundwater, and chemical mass loss by flow through groundwater.

New Hampshire↗

USGS2011

Structural and functional effects of herbicides on non-target organisms in aquatic ecosystems with an emphasis on atrazine

Herbicide use has increased dramatically around the world over the past 6 decades (Gianessi and Reigner, 2007). Few herbicides were in use in the 1950s. However, by 2001 approximately 1.14 billion kilograms of herbicides were applied globally for the control of undesireable vegetation in agricultural, silvicultural, lawncare, aquacultural, and irrigation/recreational water management activities (Kiely et al., 2004). Twenty-eight percent of the total mass of herbicides is applied in the United States, with the remaining 72 percent being applied elsewhere around the globe (Kiely et al., 2004). Herbicides represent 36% of global pesticide use, followed by insecticides (25%), fungicides (10%) and other chemical classes (Kiely et al., 2004). Agricultural production accounts for approximately 90% of herbicide use in the U.S. (Kiely et al., 2004). Gianessi and Reigner (2007) indicated that herbicides are routinely used on more than 90% of the area designated for large commercial crops including corn, soybeans, cotton, sugar beets, peanuts, and rice. Increased farm mechanization, technological advancements in production of inexpensive sources of inorganic nitrogen fertilizer (e.g., anhydrous ammonia), and conversion of forest, grassland, and wetland habitats to cropland has led to a tremendous increase in global food production over the past half-century. Herbicides have augmented advances in large-scale agricultural systems and have largely replaced mechanical and hand-weeding control mechanisms (Gianessi and Reigner, 2007). The wide-spread use of herbicides in agriculture has resulted in frequent chemical detections in surface and groundwaters (Gilliom, 2007). The majority of herbicides used are highly water soluble and are therefore prone to runoff from terrestrial environments. In additon, spray drift and atmospheric deposition can contribute to herbicide contamination of aquatic environments. Lastly, selected herbicides are deliberately applied to aquatic environments for controlling nuisance aquatic vegetation. Although aquatic herbicide exposure has been widely documented, these exposures are not necessarily related to adverse non-target ecological effects on natural communities in aquatic environments. This chapter evaluates the potential for effects of herbicides on the structure and function of aquatic envrionments at the population, community, and ecosystem levels of biological organization. In this manuscript I examine several critical aspects of the subject matter area: primary herbicides in use and chemical modes of action; the regulatory process used for registration and risk assessment of herbicides; data regarding non-target risks and the relative sensitivity of aquatic plants, inveretebrates, and fish to herbicides; and emerging areas of science regarding the potential for endocrine-disrupting effects of herbicides on aquatic vertebrates. Much of the focus of this paper is on atrazine due to the extensive database which exists regarding its fate and effects.

Book chapter↗

USGS2016

Exotic annual Bromus invasions: Comparisons among species and ecoregions in the western United States

Exotic annual Bromus species are widely recognized for their potential to invade, dominate, and alter the structure and function of ecosystems. In this chapter, we summarize the invasion potential, ecosystem threats, and management strategies for different Bromus species within each of five ecoregions of the western United States. We characterize invasion potential and threats in terms of ecosystem resistance to Bromus invasion and ecosystem resilience to disturbance with an emphasis on the importance of fire regimes. We also explain how soil temperature and moisture regimes can be linked to patterns of resistance and resilience and provide a conceptual framework that can be used to evaluate the relative potential for invasion and ecological impact of the dominant exotic annual Bromus species in the western United States.

Book chapter↗

USGS2013

Surface water quality in streams and rivers: Scaling, and climate change

This chapter explores spatial and temporal scaling and the impact of climate change on four basic water quality parameters: temperature, pH, dissolved oxygen, and suspended sediment. An introduction describing the conditions and changes in these water quality parameters is presented. Temporal scaling of water quality parameters is discussed on diel (24 h), precipitation event, and seasonal time scales. Discussion of longitudinal scaling of these parameters is included as well. Effects of climate change are presented here with a focus on observed trends, modeling results, and confounding factors in predicting climate change-induced shifts in water quality. This review highlights how factors such as geographic location, land cover, and human perturbations can alter water quality trends in rivers and streams.

Book chapter↗

USGS2023

Competition with other ungulates

Competition can affect species assemblages, population dynamics of competitors, and ecosystem processes. Understanding interspecific competition involves considering multidimensional factors that relate directly to the niche of competitors. For coexistence of species to occur, overlap on an important niche axis, such as diet, habitat, or space, must be accompanied by avoidance on another axis. Observed patterns of resource partitioning may have resulted from past competitive interactions, which reflect the realized rather than fundamental niches of competitors. Moreover, niche space and resultant overlap in resource use by competitors may differ seasonally, thereby leading to variation in competitive outcomes. This chapter describes interactions of black-tailed and mule deer (i.e., deer) with American bison; collared peccary; domestic livestock; elk; exotic animals, feral burros, horses, and pigs; moose; mountain sheep; pronghorn; and white-tailed deer. A changing climate holds potential to adversely affect deer across their distribution. Negative effects on forage quality and patterns of green-up may affect productivity of populations and alter migratory patterns. Drought in summer and amount and timing of spring rainfall may influence the distribution of deer and affect survival, especially in desert ecosystems. How such changes affect competitive interactions of mule deer with other ungulates is uncertain, and requires further research.

Book chapter↗

USGS2015

Interactions of water quality and integrated groundwater management: Examples from the United States and Europe

Groundwater is available in many parts of the world, but the quality of the water may limit its use. Contaminants can limit the use of groundwater through concerns associated with human health, aquatic health, economic costs, or even societal perception. Given this broad range of concerns, this chapter focuses on examples of how water quality issues influence integrated groundwater management. One example evaluates the importance of a naturally occurring contaminant Arsenic (As) for drinking water supply, one explores issues resulting from agricultural activities on the land surface and factors that influence related groundwater management, and the last examines unique issues that result from human-introduced viral pathogens for groundwater-derived drinking water vulnerability. The examples underscore how integrated groundwater management lies at the intersections of environmental characterization, engineering constraints, societal needs, and human perception of acceptable water quality. As such, water quality factors can be a key driver for societal decision making.

Book chapter↗

USGS2018

The northern pike, a prized native but disastrous invasive: Chapter 14

As the chapters in this book describe, the northern pike Esox lucius Linneaus, 1758 is a fascinating fish that plays an important ecological role in structuring aquatic communities (chapter 8), has the capacity to aid lake restoration efforts (chapter 11), and contributes substantially to local economies, both as a highlysought after sport fish (chapter 12) and as a commercial fishing resource (chapter 13). However, despite the magnificent attributes of this fish, there is another side to its story. Specifically, what happens when northern pike, a highly efficient predator, becomes established outside its natural range? To explore this question, this chapter will investigate observed consequences from many locations where northern pike (hereafter referred to as “pike”) have been introduced and discuss potential reasons why pike, under the right circumstances, can be considered an invasive species.

Book chapter↗

USGS1999

Toward the use of remote sensing and other data to delineate functional types in terrestrial and aquatic systems

This chapter discusses the role that remotely sensed data play in improving the ability to document the distribution of global land cover types. If the relationships between the cover types and trace gas fluxes can be determined, then the dynamics of these fluxes can be established. The chapter discusses important aquatic systems—such as wetlands—and the land–water interface. Researchers have a wide variety of options available to utilize the remotely sensed data for the scaling of trace gas fluxes between terrestrial and aquatic ecosystems and the atmosphere. An important application of remote sensing for improving the understanding of trace gas fluxes is the classification of land cover types. Remote sensing is a powerful tool for the collection of environmental data. When combined with other more conventional data, they can be analyzed to extract a wide variety of environmental themes. Models can be developed for improving the fundamental understanding of the dynamics of complex interconnected systems that support and sustain life on earth.

Book chapter↗

USGS2015

Volcanic ash hazards and aviation risk: Chapter 4

The risks to safe and efficient air travel from volcanic-ash hazards are well documented and widely recognized. Under the aegis of the International Civil Aviation Organization, globally coordinated mitigation procedures are in place to report explosive eruptions, detect airborne ash clouds and forecast their expected movement, and issue specialized messages to warn aircraft away from hazardous airspace. This mitigation framework is based on the integration of scientific and technical capabilities worldwide in volcanology, meteorology, and atmospheric physics and chemistry. The 2010 eruption of Eyjafjallajökull volcano in Iceland, which led to a nearly week-long shutdown of air travel into and out of Europe, has prompted the aviation industry, regulators, and scientists to work more closely together to improve how hazardous airspace is defined and communicated. Volcanic ash will continue to threaten aviation and scientific research will continue to influence the risk-mitigation framework.

Book chapter↗