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Strategic Science for Coral Ecosystems 2007-2011

Shallow and deep coral ecosystems are being imperiled by a combination of stressors. Climate change, unsustainable fishing practices, and disease are transforming coral communities at regional to global scales. At local levels, excessive amounts of sediments, nutrients, and contaminants are also impacting the many benefits that healthy coral ecosystems provide. This Plan, Strategic Science for Coral Ecosystems, describes the information needs of resource managers and summarizes current research being conducted by U.S. Geological Survey (USGS) scientists and partners. It outlines important research actions that need to be undertaken over the next five years to achieve more accurate forecasting of future conditions and develop more effective decision-support tools to adaptively manage coral ecosystems. The overarching outcome of this Plan, if fully implemented, would be in transferring relevant knowledge to decision-makers, enabling them to better protect and sustain coral ecosystem services. These services include sources of food, essential habitat for fisheries and protected species, protection of coastlines from wave damage and erosion, recreation, and cultural values for indigenous communities. The USGS has a long history of research and monitoring experience in studying ancient and living coral communities and serving many stakeholders. The research actions in this Plan build on the USGS legacy of conducting integrated multidisciplinary science to address complex environmental issues. This Plan is responsive to Federal legislation and authorities and a variety of external and internal drivers that include the President's Ocean Action Plan, the recommendations of the Coral Reef Task Force, the information needs of Bureaus in the Department of Interior, the USGS Bureau Science Strategy (USGS 2007) and the formal plans of several USGS Programs. To achieve this Plan's desired outcomes will require increased funding and more effective coordination and collaboration among USGS managers and scientists within a national and international framework of partnerships in coral ecosystem science.

Circular

A preliminary assessment of the spatial sources of contemporary suspended sediment in the Ohio River basin, United States, using water quality data from the NASQAN programme in a source tracing procedure

Reliable information on catchment scale suspended sediment sources is required to inform the design of management strategies for helping abate the numerous environmental issues associated with enhanced sediment mobilization and off‐site loadings. Since sediment fingerprinting techniques avoid many of the logistical constraints associated with using more traditional indirect measurement methods at catchment scale, such approaches have been increasingly reported in the international literature and typically use data sets collected specifically for sediment source apportionment purposes. There remains scope for investigating the potential for using geochemical data sets assembled by routine monitoring programmes to fingerprint sediment provenance. In the United States, routine water quality samples are collected as part of the US Geological Survey's revised National Stream Quality Accounting Network programme. Accordingly, the geochemistry data generated from these samples over a 10‐year period (1996–2006) were used as the basis for a fingerprinting exercise to assess the key tributary sub‐catchment spatial sources of contemporary suspended sediment transported by the Ohio River. Uncertainty associated with the spatial source estimates was quantified using a Monte Carlo approach in conjunction with mass balance modelling. Relative frequency weighted means were used as an alternative way of summarizing the spatial source contributions, thereby avoiding the need to use confidence limits. The results should be interpreted in the context of the routine, but infrequent nature, of the suspended sediment samples used to assemble geochemistry as a basis for the sourcing exercise. Nonetheless, the study demonstrates how routine monitoring samples can be used to provide some preliminary information on sediment provenance in large drainage basins.

Tennessee, Ohio, West Virginia, Pennsylvania, Indi

The role of biological uptake in iron and manganese cycling in Lake Baikal

The role of biological uptake in the internal cycling of Fe and Mn in Lake Baikal was quantified. Biological uptake, sedimentation consisting of the biogenic and lithogenic fluxes, and remineralization have been evaluated. The results of calculations show that about 5-10% of Fe and Mn accumulated in the lake are annually taken up by biota. More than 80% of this amount is again recycled after remineralization of biological material. At this, the biogenic fluxes of Fe and Mn are 2-4 times less compared to lithogenic ones. Thus not only is oxidation of Fe and Mn within the water column highly enriched in the oxygen that results in settling of Fe and Mn oxides, but also intensive biological uptake of these elements contributes to their fast removal from internal cycling. However, essential remineralization makes this process of minor importance to Fe and Mn cycling in Lake Baikal. ?? Springer 2006.

Conference Paper

A dynamic leaf gas-exchange strategy is conserved in woody plants under changing ambient CO 2 : evidence from carbon isotope discrimination in paleo and CO 2 enrichment studies

Rising atmospheric [CO 2 ], c a , is expected to affect stomatal regulation of leaf gas-exchange of woody plants, thus influencing energy fluxes as well as carbon (C), water, and nutrient cycling of forests. Researchers have proposed various strategies for stomatal regulation of leaf gas-exchange that include maintaining a constant leaf internal [CO 2 ], c i , a constant drawdown in CO 2 ( c a − c i ), and a constant c i / c a . These strategies can result in drastically different consequences for leaf gas-exchange. The accuracy of Earth systems models depends in part on assumptions about generalizable patterns in leaf gas-exchange responses to varying c a . The concept of optimal stomatal behavior, exemplified by woody plants shifting along a continuum of these strategies, provides a unifying framework for understanding leaf gas-exchange responses to c a . To assess leaf gas-exchange regulation strategies, we analyzed patterns in c i inferred from studies reporting C stable isotope ratios (δ 13 C) or photosynthetic discrimination (∆) in woody angiosperms and gymnosperms that grew across a range of c a spanning at least 100 ppm. Our results suggest that much of the c a -induced changes in c i / c a occurred across c a spanning 200 to 400 ppm. These patterns imply that c a − c i will eventually approach a constant level at high c a because assimilation rates will reach a maximum and stomatal conductance of each species should be constrained to some minimum level. These analyses are not consistent with canalization toward any single strategy, particularly maintaining a constant c i . Rather, the results are consistent with the existence of a broadly conserved pattern of stomatal optimization in woody angiosperms and gymnosperms. This results in trees being profligate water users at low c a , when additional water loss is small for each unit of C gain, and increasingly water-conservative at high c a , when photosystems are saturated and water loss is large for each unit C gain.

Global Change Biology

Water-resources activities of the U.S. Geological Survey in Idaho, fiscal years 1989-90

Twenty-five funded projects were conducted by the Water Resources Division of the U.S. Geological Survey, Idaho District, during fiscal years 1989-90. These projects were done in cooperation with 13 State and local agencies, 11 other Federal agencies, and 1 International Commission. State and local cooperative funding amounted to about $1.1 million in fiscal year 1989 and $1 million in fiscal year 1990; Federal funding amounted to about $3.6 million in fiscal year 1989 and about $4.4 million in fiscal year 1990. In conducting its fiscal year 1989-90 activities, the Idaho District employed a total of 83 employees. Projects other than continuing programs for collection of hydrologic data included establishment of statewide surface-water and groundwater-quality monitoring networks; study of effects of irrigation drainage; development of a hydraulic model to determine water-surface elevations for decreased discharges of the Snake River at Swan Falls Dam; evaluation of subsurface waste disposal; delineation of agricultural areas of the State with high concentrations of dissolved nitrogen; evaluation of water use and its effect on groundwater levels and thermal waters in specific areas of the State; and determination of the cause or causes of rapidly decreasing hot-spring discharges along Hot Creek. (USGS)

Open-File Report

Water projects design with inadequate data: Madrid, Spain June 4-9, 1973

The Symposium on the Design of Water Resources Projects with Inadequate Data drew 300 participants, representing more than 60 countries. The symposium was planned within the framework of the International Hydrological Decade and was convened by Unesco and WMO. Organization of the symposium was carried out by Unesco and the Spanish National Committee for the IHD in cooperation with WMO and the IAHS. These organizations are to be commended for their efforts toward ensuring the success of the symposium. The efforts of the Spanish National Committee, which handled the many local arrangements, are especially appreciated.

Madrid

Tritium and plutonium in waters from the Bering and Chukchi Seas

During the summer of 1993, seawater in the Bering and Chukchi Seas was sampled on a joint Russian-American cruise [BERPAC] of the RV Okean to determine concentrations of tritium, 239Pu and 240Pu. Concentrations of tritium were determined by electrolytic enrichment and liquid scintilation counting. Tritium levels ranged up to 420 mBq L-1 showed no evidence of inputs other than those attribute atmospheric nuclear weapons testing. Plutonium was recovered from water samples by ferric hydroxide precipitation, and concentrations were determined by thermal ionization mass spectrometry. 239+240Pu concentrations ranged from <1 to 5.5 [mu]Bq L-1. These concentrations are lower than those measured in water samples from other parts of the ocean during the mid-1960's to the late 1980's. The 240Pu:239Pu ratios, although associated with large uncertainties, suggest that most of the plutonium is derived from world-wide fallout. As points of comparison, the highest concentrations of tritium and plutonium observed here were about five orders of magnitude lower than the maximum permissible concentrations allowed in water released to the off-site environs from licensed nuclear facilities in the United States. This study and others sponsored by the International Atomic Energy Agency and the Office of Naval Research's Arctic Nuclear Waste Assessment Program are providing data for the assessment of potential radiological impacts in the Arctic regions associated with nuclear waste disposal by the former Soviet Union.

Health Physics

Nitrogen excess in North American ecosystems: Predisposing factors, ecosystem responses, and management strategies

Most forests in North America remain nitrogen limited, although recent studies have identified forested areas that exhibit symptoms of N excess, analogous to overfertilization of arable land. Nitrogen excess in watersheds is detrimental because of disruptions in plant/soil nutrient relations, increased soil acidification and aluminum mobility, increased emissions of nitrogenous greenhouse gases from soil, reduced methane consumption in soil, decreased water quality, toxic effects on freshwater biota, and eutrophication of coastal marine waters. Elevated nitrate ( NO 3 − ) loss to groundwater or surface waters is the primary symptom of N excess. Additional symptoms include increasing N concentrations and higher N:nutrient ratios in foliage (i.e., N:Mg, N:P), foliar accumulation of amino acids or NO 3 − , and low soil C:N ratios. Recent nitrogen-fertilization studies in New England and Europe provide preliminary evidence that some forests receiving chronic N inputs may decline in productivity and experience greater mortality. Long-term fertilization at Mount Ascutney, Vermont, suggests that declining and slow N-cycling coniferous stands may be replaced by fast-growing and fast N-cycling deciduous forests. Symptoms of N saturation are particularly severe in high-elevation, nonaggrading spruce–fir ecosystems in the Appalachian Mountains and in eastern hardwood watersheds at the Fernow Experimental Forest near Parsons, West Virginia. In the Los Angeles Air Basin, mixed conifer forests and chaparral watersheds with high smog exposure are N saturated and exhibit the highest streamwater NO 3 − concentrations for wildlands in North America. High-elevation alpine watersheds in the Colorado Front Range and a deciduous forest in Ontario, Canada, are N saturated, although N deposition is moderate (∼8 kg·ha −1 ·yr −1 ). In contrast, the Harvard Forest hardwood stand in Massachusetts has absorbed >900 kg N/ha during 8 yr of N amendment studies without significant NO 3 − leaching, illustrating that ecosystems vary widely in the capacity to retain N inputs. Overly mature forests with high N deposition, high soil N stores, and low soil C:N ratios are prone to N saturation and NO 3 − leaching. Additional characteristics favoring low N retention capacity include a short growing season (reduced plant N demand) and reduced contact time between drainage water and soil (i.e., porous coarse-textured soils, exposed bedrock or talus). Temporal patterns of hydrologic fluxes interact with biotic uptake and internal cycling patterns in determining ecosystem N retention. Soils are the largest storage pool for N inputs, although vegetation uptake is also important. Recent studies indicate that nitrification may be widespread in undisturbed ecosystems, and that microbial assimilation of NO 3 − may be a significant N retention mechanism, contrary to previous assumptions. Further studies are needed to elucidate the sites, forms, and mechanisms of N retention and incorporation into soil organic matter, and to test potential management options for mitigating N losses from forests. Implementation of intensive management practices in N-saturated ecosystems may only be feasible in high-priority areas and on a limited scale. Reduction of N emissions would be a preferable solution, although major reductions in the near future are unlikely in many areas due to economic, energy-use, policy, and demographic considerations.

Ecological Applications

Data and applications for study of the water cycle in Africa

There are a number data set development, data dissemination, and applications activities at the U.S. Geological Survey (USGS) that contribute to the study of the water cycle in Africa. Some of these stem from global change research initiatives, while others are the result of technical assistance provided to international development and humanitarian assistance projects. Data themes include topography and related hydrological derivatives, land cover, satellite rainfall estimates, and vegetation indices. Some data sets are USGS products, while others originate from cooperating agencies like NASA and NOAA and are distributed secondarily. In Africa, applications include agrometeorological estimates, drought and flood monitoring. Many of the data sets are available to the user community without charge by internet, or at cost of reproduction on CDROM and tape media.

Conference Paper

The U.S. Geological Survey’s Gas Hydrates Project

The Gas Hydrates Project at the U.S. Geological Survey (USGS) focuses on the study of methane hydrates in natural environments. The project is a collaboration between the USGS Energy Resources and the USGS Coastal and Marine Geology Programs and works closely with other U.S. Federal agencies, some State governments, outside research organizations, and international partners. The USGS studies the formation and distribution of gas hydrates in nature, the potential of hydrates as an energy resource, and the interaction between methane hydrates and the environment. The USGS Gas Hydrates Project carries out field programs and participates in drilling expeditions to study marine and terrestrial gas hydrates. USGS scientists also acquire new geophysical data and sample sediments, the water column, and the atmosphere in areas where gas hydrates occur. In addition, project personnel analyze datasets provided by partners and manage unique laboratories that supply state-of-the-art analytical capabilities to advance national and international priorities related to gas hydrates.

Fact Sheet

Sediment distribution and hydrologic conditions of the Potomac aquifer in Virginia and parts of Maryland and North Carolina

Sediments of the heavily used Potomac aquifer broadly contrast across major structural features of the Atlantic Coastal Plain Physiographic Province in eastern Virginia and adjacent parts of Maryland and North Carolina. Thicknesses and relative dominance of the highly interbedded fluvial sediments vary regionally. Vertical intervals in boreholes of coarse-grained sediment commonly targeted for completion of water-supply wells are thickest and most widespread across the central and southern parts of the Virginia Coastal Plain. Designated as the Norfolk arch depositional subarea, the entire sediment thickness here functions hydraulically as a single interconnected aquifer. By contrast, coarse-grained sediment intervals are thinner and less widespread across the northern part of the Virginia Coastal Plain and into southern Maryland, designated as the Salisbury embayment depositional subarea. Fine-grained intervals that are generally avoided for completion of water-supply wells are increasingly thick and widespread northward. Fine-grained intervals collectively as thick as several hundred feet comprise two continuous confining units that hydraulically separate three vertically spaced subaquifers. The subaquifers are continuous northward but merge southward into the single undivided Potomac aquifer. Lastly, far southeastern Virginia and northeastern North Carolina are designated as the Albemarle embayment depositional subarea, where both coarse- and fine-grained intervals are of only moderate thickness. The entire sediment thickness functions hydraulically as a single interconnected aquifer. A substantial hydrologic separation from overlying aquifers is imposed by the upper Cenomanian confining unit. Potomac aquifer sediments were deposited by a fluvial depositional complex spanning the Virginia Coastal Plain approximately 100 to 145 million years ago. Westward, persistently uplifted granite and gneiss source rocks sustained a supply of coarse-grained sand and gravel. Immature, high-gradient braided streams deposited longitudinal bars and channel fills across the Norfolk arch subarea. By contrast, across the Salisbury and Albemarle embayment subareas, mature, medium- to low-gradient meandering streams deposited medium- to coarse-grained channel fills and point bars segregated from fine-grained overbank deposits. The Virginia depositional complex merged northward across the Salisbury embayment subarea with another complex in Maryland. Here, additional sediments were received from schist source rocks that underwent three cycles of initial uplift and rapid erosion followed by crustal stability and erosional leveling. Because of the predominance of coarse-grained sediments, transmissivity, hydraulic conductivity, and regional velocities of lateral flow through the Potomac aquifer are greatest across the Norfolk arch depositional subarea, but decrease progressively northward with increasingly fine-grained sediments. Confining units hydraulically separate the Potomac aquifer from overlying aquifers, as indicated by large vertical hydraulic gradients. By contrast, most of the Potomac aquifer internally functions hydraulically as a single interconnected aquifer, as indicated by uniformly small vertical gradients. Most fine-grained sediments within the aquifer do not hydraulically separate overlying and underlying coarse-grained sediments. Across the Salisbury embayment depositional subarea, however, hydraulic separation among the vertically spaced subaquifers is imposed by the intervening confining units. The Potomac aquifer is the largest and most heavily used source of groundwater in the Virginia Coastal Plain. Water-level declines as great as 200 feet create the potential for saltwater intrusion. Conventional stratigraphic correlation has been generally ineffective at accurately characterizing complexly distributed fluvial sediments that compose the Potomac aquifer. Consequently, the aquifer’s internal hydraulic connectivity and overall hydrologic function have not been well understood. Water-supply planning and development efforts have been hampered, and interpretations of regulatory criteria for allowable water-level declines have been ambiguous. An investigation undertaken during 2010–11 by the U.S. Geological Survey, in cooperation with the Virginia Department of Environmental Quality, provides a comprehensive regional description of the spatial distribution of Potomac aquifer sediments and their relation to hydrologic conditions. Altitudes and thicknesses of 2,725 vertical sediment intervals represent the spatial distribution of Potomac aquifer sediments in the Virginia Coastal Plain and adjacent parts of Maryland and North Carolina. Sediment intervals are designated as either dominantly coarse or fine grained and were determined by interpretation of geophysical logs and ancillary information from 456 boreholes. Sediment-interval and borehole summary statistical data indicate regional trends in sediment lithology and stratigraphic continuity, upon which three structurally based and hydrologically distinct sediment depositional subareas are designated. Broad patterns of sediment deposition over time are inferred from published sediment pollen-age data. Discrepancies in previously drawn hydrostratigraphic relations between southeastern Virginia and northeastern North Carolina are partly resolved based on borehole geophysical logs and a recently documented geologic map and corehole. A conceptual model theorizes the depositional history of the sediments and geologically accounts for their distribution. Documented pumping tests of the Potomac aquifer at 197 locations produced 336 values of transmissivity and 127 values of storativity. Based on effective aquifer thicknesses, 296 values of sediment hydraulic conductivity and 113 values of sediment specific storage are calculated. Vertical hydraulic gradients are calculated from 9,479 pairs of water levels measured between November 17, 1953, and October 4, 2011, in 129 closely spaced pairs of wells. Borehole sediment-interval and related data provide a means to achieve high yielding production wells in the Potomac aquifer by site-specific targeting of drilling operations toward water-bearing coarse-grained sand and gravel. Advance knowledge of the potential of different parts of the aquifer also aids in planning optimal groundwater-development areas. Depositional subareas further provide a possible context for resource management. Current (2013) regulatory limits on water-level declines are relative to top surfaces of subdivided upper, middle, and lower Potomac aquifers across the entire Virginia Coastal Plain, but have the potential to exceed the same limit relative to a single undivided Potomac aquifer. By contrast, designation of the sediments as a single aquifer in the Norfolk arch and Albemarle embayment subareas—and as a series of vertically spaced subaquifers and intervening confining units in the Salisbury embayment subarea—best reflects understanding of the Potomac aquifer and can avoid the potential for excessive water-level declines. Simulation modeling to evaluate effects of groundwater withdrawals could be designed similarly, including vertical discretization and (or) zonation of the Potomac aquifer based on depositional subareas and a geostatistical distribution of aquifer properties derived from borehole sediment-interval data. Further resource-management information needs extend beyond the developed part of the Potomac aquifer, particularly across the Northern Neck and Middle Peninsula where only the shallowest part of the aquifer is known, and include structural aspects such as faults, basement bedrock, and the Chesapeake Bay impact crater.

Maryland, North Carolina, Virginia

Quality-Assurance Data for Routine Water Analyses by the U.S. Geological Survey Laboratory in Troy, New York-July 1997 through June 1999

The laboratory for analysis of low-ionic-strength water at the U.S. Geological Survey (USGS) Water Science Center in Troy, N.Y., analyzes samples collected by USGS projects throughout the Northeast. The laboratory's quality-assurance program is based on internal and interlaboratory quality-assurance samples and quality-control procedures that were developed to ensure proper sample collection, processing, and analysis. The quality-assurance/quality-control data for the time period addressed in this report were stored in the laboratory's SAS data-management system, which provides efficient review, compilation, and plotting of data. This report presents and discusses results of quality-assurance and quality- control samples analyzed from July 1997 through June 1999. Results for the quality-control samples for 18 analytical procedures were evaluated for bias and precision. Control charts indicate that data for eight of the analytical procedures were occasionally biased for either high-concentration and (or) low-concentration samples but were within control limits; these procedures were: acid-neutralizing capacity, total monomeric aluminum, total aluminum, ammonium, calcium, chloride, specific conductance, and sulfate. The data from the potassium and sodium analytical procedures are insufficient for evaluation. Results from the filter-blank and analytical-blank analyses indicate that the procedures for 11 of 13 analytes were within control limits, although the concentrations for blanks were occasionally outside the control limits. Blank analysis results for chloride showed that 22 percent of blanks did not meet data-quality objectives and results for dissolved organic carbon showed that 31 percent of the blanks did not meet data-quality objectives. Sampling and analysis precision are evaluated herein in terms of the coefficient of variation obtained for triplicate samples in the procedures for 14 of the 18 analytes. At least 90 percent of the samples met data-quality objectives for all analytes except total aluminum (70 percent of samples met objectives) and potassium (83 percent of samples met objectives). Results of the USGS interlaboratory Standard Reference Sample (SRS) Project indicated good data quality for most constituents over the time period. The P-sample (low-ionic-strength constituents) analysis had good ratings in two of these studies and a satisfactory rating in the third. The results of the T-sample (trace constituents) analysis indicated high data quality with good ratings in all three studies. The N-sample (nutrient constituents) studies had one each of excellent, good, and satisfactory ratings. Results of Environment Canada's National Water Research Institute (NWRI) program indicated that at least 80 percent of the samples met data-quality objectives for 9 of the 13 analytes; the exceptions were dissolved organic carbon, ammonium, chloride, and specific conductance. Data-quality objectives were not met for dissolved organic carbon in two NWRI studies, but all of the samples were within control limits for the last study. Data-quality objectives were not met in 41 percent of samples analyzed for ammonium, 25 percent of samples analyzed for chloride, and 30 percent of samples analyzed for specific conductance. Results from blind reference-sample analyses indicated that data-quality objectives were met by at least 84 percent of the samples analyzed for calcium, chloride, magnesium, pH, and potassium. Data-quality objectives were met by 73 percent of those analyzed for sulfate. The data-quality objective was not met for sodium. The data are insufficient for evaluation of the specific conductance results.

Open-File Report

Time-lapse seafloor surveys reveal how turbidity currents and internal tides in Monterey Canyon interact with the seabed at centimeter-scale

Here we show how ultra-high resolution seabed mapping using new technology can help to understand processes that sculpt submarine canyons. Time-lapse seafloor surveys were conducted in the axis of Monterey Canyon, ∼50 km from the canyon head (∼1,840 m water depth) over an 18-month period. These surveys comprised 5-cm resolution multibeam bathymetry, 1-cm resolution lidar bathymetry, and 2-mm resolution stereophotographic imagery. Bathymetry data reveal centimeter-scale textures that would be undetectable by more traditional survey methods. Upward-looking Acoustic Doppler Current Profilers at the site recorded the flow character of internal tides and the passage of three turbidity currents, while sediment cores collected from the site record flow deposits. Combined with flow and core data, the bathymetry shows how turbidity currents and internal tides modify the seabed. The turbidity currents drape sediment across the site, infilling bedform troughs and smoothing erosional features carved by the internal tides (e.g., rippled scours). Turbidity currents with speeds of 0.9–3.3 m/s failed to cause notable bedform movement, which is surprising given that flows with similar speeds produced rapid bedform migration elsewhere, including the upper Monterey Canyon. The lack of migration may be related to the character of the underlying substrate or indicate that turbidity currents at the site lack dense, near-bed layers. The scale of scours produced by the internal tides (≤0.7 m/s) approaches the scale of features recorded in the ancient rock record. Thus, these results illustrate how the scale gap between seabed mapping technology and the rock record may eventually be bridged.

California

Microgravity methods for characterization of groundwater-storage changes and aquifer properties in the karstic Madison aquifer in the Black Hills of South Dakota, 2009-12

A study of groundwater storage in the karstic Madison aquifer in the Black Hills of South Dakota using microgravity methods was conducted by the U.S. Geological Survey in cooperation with West Dakota Water Development District, South Dakota Department of Environment and Natural Resources, and Lawrence County. Microgravity measurements from 2009 to 2012 were used to investigate groundwater-storage changes and effective porosity in unconfined areas of the Madison aquifer. Time-lapse microgravity surveys that use portable high-sensitivity absolute and relative gravimeters indicated temporal-gravity changes as a result of changing groundwater mass. These extremely precise measurements of gravity required characterization and removal of internal instrumental and external environmental effects on gravity from the raw data. The corrected data allowed groundwater-storage volume to be quantified with an accuracy of about plus or minus 0.5 foot of water per unit area of aquifer. Quantification of groundwater-storage change, coupled with water-level data from observation wells located near the focus areas, also was used to calculate the effective porosity at specific altitudes directly beneath gravity stations. Gravity stations were established on bedrock outcrops in three separate focus areas for this study. The first area, the Spring Canyon focus area, is located to the south of Rapid City with one gravity station on the rim of Spring Canyon near the area where Spring Creek sinks into the Madison aquifer. The second area, the Doty focus area, is located on outcrops of the Madison Limestone and Minnelusa Formation to the northwest of Rapid City, and consists of nine gravity stations. The third area, the Limestone Plateau focus area, consists of a single gravity station in the northwestern Black Hills located on an outcrop of the Madison Limestone. An absolute-gravity station, used to tie relative-gravity survey data together, was established on a relatively impermeable bedrock outcrop to minimize groundwater-storage change at the reference location. Data from the three focus areas allow for interpretation of groundwater-storage characteristics using microgravity measurements. Gravity measurements, together with water-level data from an observation well located 2 miles from the Spring Canyon focus area and measured streamflow in Spring Creek, provided evidence that rapid groundwater-storage change, responding to changes in sinking streamflow over the recharge area of the aquifer, occurred in the Madison aquifer directly beneath the gravity station at Spring Canyon. This phenomenon likely was a result of groundwater movement through caverns, conduits, and fractures, which are common in karst aquifers. Spatially and temporally separated microgravity data for the Doty focus area indicated horizontal and vertical heterogeneity of effective porosity for the Madison aquifer. One such example of this was indicated by water-level measurements at an observation well and gravity measurements at four gravity stations in the southeastern part of the Doty area, which were used to estimate effective porosity values ranging from greater than 0 to 0.18. A decrease in groundwater storage determined by microgravity measurements during the spring recharge period for five upgradient stations in the Doty focus area indicated the possibility of rapid release and downgradient cascading of perched groundwater. Evidence for similar phenomena was documented for Wind Cave and Brooks Cave in the Black Hills. Absolute-gravity measurements at the Limestone Plateau focus area confirmed the relation between water levels in an observation well and changes in groundwater storage. Comparison of these gravity measurements with water levels in a nearby observation well resulted in an effective porosity estimate of 0.02 for the Madison aquifer beneath the gravity station.

South Dakota

Behavior of a wave-driven buoyant surface jet on a coral reef

A wave-driven surface buoyant jet exiting a coral reef was studied in order to quantify the amount of water re-entrained over the reef crest. Both moored observations and Lagrangian drifters were used to study the fate of the buoyant jet. To investigate in detail the effects of buoyancy and along-shore flow variations, we developed an idealized numerical model of the system. Consistent with previous work, the ratio of along-shore velocity to jet-velocity and the jet internal Froude number were found to be important determinants of the fate of the jet. In the absence of buoyancy, the entrainment of fluid at the reef crest, creates a significant amount of retention, keeping 60% of water in the reef system. However, when the jet is lighter than the ambient ocean-water, the net effect of buoyancy is to enhance the separation of the jet from shore, leading to a greater export of reef water. Matching observations, our modeling predicts that buoyancy limits retention to 30% of the jet flow for conditions existing on the Moorea reef. Overall, the combination of observations and modeling we present here shows that reef-ocean temperature gradients can play an important role in reef-ocean exchanges.

Journal of Geophysical Research C: Oceans

Quality-Assurance Data for Routine Water Analyses by the U.S. Geological Survey Laboratory in Troy, New York--July 1999 through June 2001

The laboratory for analysis of low-ionic-strength water at the U.S. Geological Survey (USGS) Water Science Center in Troy, N.Y., analyzes samples collected by USGS projects throughout the Northeast. The laboratory's quality-assurance program is based on internal and interlaboratory quality-assurance samples and quality-control procedures that were developed to ensure proper sample collection, processing, and analysis. The quality-assurance and quality-control data were stored in the laboratory's LabMaster data-management system, which provides efficient review, compilation, and plotting of data. This report presents and discusses results of quality-assurance and quality-control samples analyzed from July 1999 through June 2001. Results for the quality-control samples for 18 analytical procedures were evaluated for bias and precision. Control charts indicate that data for eight of the analytical procedures were occasionally biased for either high-concentration or low-concentration samples but were within control limits; these procedures were: acid-neutralizing capacity, total monomeric aluminum, total aluminum, calcium, chloride and nitrate (ion chromatography and colormetric method) and sulfate. The total aluminum and dissolved organic carbon procedures were biased throughout the analysis period for the high-concentration sample, but were within control limits. The calcium and specific conductance procedures were biased throughout the analysis period for the low-concentration sample, but were within control limits. The magnesium procedure was biased for the high-concentration and low concentration samples, but was within control limits. Results from the filter-blank and analytical-blank analyses indicate that the procedures for 14 of 15 analytes were within control limits, although the concentrations for blanks were occasionally outside the control limits. The data-quality objective was not met for dissolved organic carbon. Sampling and analysis precision are evaluated herein in terms of the coefficient of variation obtained for triplicate samples in the procedures for 17 of the 18 analytes. At least 90 percent of the samples met data-quality objectives for all analytes except ammonium (81 percent of samples met objectives), chloride (75 percent of samples met objectives), and sodium (86 percent of samples met objectives). Results of the USGS interlaboratory Standard Reference Sample (SRS) Project indicated good data quality over the time period, with most ratings for each sample in the good to excellent range. The P-sample (low-ionic-strength constituents) analysis had one satisfactory rating for the specific conductance procedure in one study. The T-sample (trace constituents) analysis had one satisfactory rating for the aluminum procedure in one study and one unsatisfactory rating for the sodium procedure in another. The remainder of the samples had good or excellent ratings for each study. Results of Environment Canada's National Water Research Institute (NWRI) program indicated that at least 89 percent of the samples met data-quality objectives for 10 of the 14 analytes; the exceptions were ammonium, total aluminum, dissolved organic carbon, and sodium. Results indicate a positive bias for the ammonium procedure in all studies. Data-quality objectives were not met in 50 percent of samples analyzed for total aluminum, 38 percent of samples analyzed for dissolved organic carbon, and 27 percent of samples analyzed for sodium. Results from blind reference-sample analyses indicated that data-quality objectives were met by at least 91 percent of the samples analyzed for calcium, chloride, fluoride, magnesium, pH, potassium, and sulfate. Data-quality objectives were met by 75 percent of the samples analyzed for sodium and 58 percent of the samples analyzed for specific conductance.

Open-File Report

Quality-Assurance Data for Routine Water Analyses by the U.S. Geological Survey Laboratory in Troy, New York - July 2005 through June 2007

The laboratory for analysis of low-ionic-strength water at the U.S. Geological Survey (USGS) Water Science Center in Troy, N.Y., analyzes samples collected by USGS projects throughout the Northeast. The laboratory's quality-assurance program is based on internal and interlaboratory quality-assurance samples and quality-control procedures that were developed to ensure proper sample collection, processing, and analysis. The quality-assurance and quality-control data were stored in the laboratory's Lab Master data-management system, which provides efficient review, compilation, and plotting of data. This report presents and discusses results of quality-assurance and quality control samples analyzed from July 2005 through June 2007. Results for the quality-control samples for 19 analytical procedures were evaluated for bias and precision. Control charts indicate that data for eight of the analytical procedures were occasionally biased for either high-concentration or low-concentration samples but were within control limits; these procedures were: total aluminum, calcium, magnesium, nitrate (colorimetric method), potassium, silicon, sodium, and sulfate. Eight of the analytical procedures were biased throughout the analysis period for the high-concentration sample, but were within control limits; these procedures were: total aluminum, calcium, dissolved organic carbon, chloride, nitrate (ion chromatograph), potassium, silicon, and sulfate. The magnesium and pH procedures were biased throughout the analysis period for the low-concentration sample, but were within control limits. The acid-neutralizing capacity, total monomeric aluminum, nitrite, and specific conductance procedures were biased for the high-concentration and low-concentration samples, but were within control limits. Results from the filter-blank and analytical-blank analyses indicated that the procedures for 16 of 17 analytes were within control limits, although the concentrations for blanks were occasionally outside the control limits. The data-quality objective was not met for dissolved organic carbon. Sampling and analysis precision are evaluated herein in terms of the coefficient of variation obtained for triplicate samples in the procedures for 18 of the 21 analytes. At least 93 percent of the samples met data-quality objectives for all analytes except acid-neutralizing capacity (85 percent of samples met objectives), total monomeric aluminum (83 percent of samples met objectives), total aluminum (85 percent of samples met objectives), and chloride (85 percent of samples met objectives). The ammonium and total dissolved nitrogen did not meet the data-quality objectives. Results of the USGS interlaboratory Standard Reference Sample (SRS) Project met the Troy Laboratory data-quality objectives for 87 percent of the samples analyzed. The P-sample (low-ionic-strength constituents) analysis had two outliers each in two studies. The T-sample (trace constituents) analysis and the N-sample (nutrient constituents) analysis had one outlier each in two studies. Results of Environment Canada's National Water Research Institute (NWRI) program indicated that at least 85 percent of the samples met data-quality objectives for 11 of the 14 analytes; the exceptions were acid-neutralizing capacity, total aluminum and ammonium. Data-quality objectives were not met in 41 percent of samples analyzed for acid-neutralizing capacity, 50 percent of samples analyzed for total aluminum, and 44 percent of samples analyzed for ammonium. Results from blind reference-sample analyses indicated that data-quality objectives were met by at least 86 percent of the samples analyzed for calcium, magnesium, pH, potassium, and sodium. Data-quality objectives were met by 76 percent of the samples analyzed for chloride, 80 percent of the samples analyzed for specific conductance, and 77 percent of the samples analyzed for sulfate.

Open-File Report