SEARCH · USGS Science

Results for “Literature Review”

Search indexed USGS publications on groundwater, aquifers, geologic maps, mineral resources and earthquakes. Explore source records by subject and place.

SourceResearch connectionFrom yearThrough year

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 505 records · Page 28Linked to original sources

USGS2022

Review of harmful algal blooms effects on birds with implications for avian wildlife in the Chesapeake Bay region

The Chesapeake Bay, along the mid-Atlantic coast of North America, is the largest estuary in the United States and provides critical habitat for wildlife. In contrast to point and non-point source release of pesticides, metals, and industrial, personal care and household use chemicals on biota in this watershed, there has only been scant attention to potential exposure and effects of algal toxins on wildlife in the Chesapeake Bay region. As background, we first review the scientific literature on algal toxins and harmful algal bloom (HAB) events in various regions of the world that principally affected birds, and to a lesser degree other wildlife. To examine the situation for the Chesapeake, we compiled information from government reports and databases summarizing wildlife mortality events for 2000 through 2020 that were associated with potentially toxic algae and HAB events. Summary findings indicate that there have been few wildlife mortality incidents definitively linked to HABs, other mortality events that were suspected to be related to HABs, and more instances in which HABs may have indirectly contributed to or occurred coincident with wildlife mortality. The dominant toxins found in the Chesapeake Bay drainage that could potentially affect wildlife are microcystins, with concentrations in water approaching or exceeding human-based thresholds for ceasing recreational use and drinking water at a number of locations. As an increasing trend in HAB events in the U.S. and in the Chesapeake Bay have been reported, additional information on HAB toxin exposure routes, comparative sensitivity among species, consequences of sublethal exposure, and better diagnostic and risk criteria would greatly assist in predicting algal toxin hazard and risks to wildlife.

Maryland, Virginia↗

USGS2017

Assessing the influence of sustainable trail design and maintenance on soil loss

Natural-surfaced trail systems are an important infrastructure component providing a means for accessing remote protected natural area destinations. The condition and usability of trails is a critical concern of land managers charged with providing recreational access while preserving natural conditions, and to visitors seeking high quality recreational opportunities and experiences. While an adequate number of trail management publications provide prescriptive guidance for designing, constructing, and maintaining natural-surfaced trails, surprisingly little research has been directed at providing a scientific basis for this guidance. Results from a review of the literature and three scientific studies are presented to model and clarify the influence of factors that substantially influence trail soil loss and that can be manipulated by trail professionals to sustain high traffic while minimizing soil loss over time. Key factors include trail grade, slope alignment angle, tread drainage features, and the amount of rock in tread substrates. A new Trail Sustainability Rating is developed and offered as a tool for evaluating or improving the sustainability of existing or new trails.

Journal of Environmental Management↗

USGS2015

Artificial reefs and reef restoration in the Laurentian Great Lakes

We reviewed the published literature to provide an inventory of Laurentian Great Lakes artificial reef projects and their purposes. We also sought to characterize physical and biological monitoring for artificial reef projects in the Great Lakes and determine the success of artificial reefs in meeting project objectives. We found records of 6 artificial reefs in Lake Erie, 8 in Lake Michigan, 3 in Lakes Huron and Ontario, and 2 in Lake Superior. We found 9 reefs in Great Lakes connecting channels and 6 reefs in Great Lakes tributaries. Objectives of artificial reef creation have included reducing impacts of currents and waves, providing safe harbors, improving sport-fishing opportunities, and enhancing/restoring fish spawning habitats. Most reefs in the lakes themselves were incidental (not created purposely for fish habitat) or built to improve local sport fishing, whereas reefs in tributaries and connecting channels were more frequently built to benefit fish spawning. Levels of assessment of reef performance varied; but long-term monitoring was uncommon as was assessment of physical attributes. Artificial reefs were often successful at attracting recreational species and spawning fish; however, population-level benefits of artificial reefs are unclear. Stressors such as sedimentation and bio-fouling can limit the effectiveness of artificial reefs as spawning enhancement tools. Our investigation underscores the need to develop standard protocols for monitoring the biological and physical attributes of artificial structures. Further, long-term monitoring is needed to assess the benefits of artificial reefs to fish populations and inform future artificial reef projects.

Journal of Great Lakes Research↗

USGS2018

The flathead catfish invasion of the Great Lakes

A detailed review of historical literature and museum data revealed that flathead catfish were not historically native in the Great Lakes Basin , with the possible exception of a relict population in Lake Erie. The species has invaded Lake Erie, Lake St. Clair, Lake Huron, nearly all drainages in Michigan, and the Fox/Wolf and Milwaukee drainages in Wisconsin. They have not been collected from Lake Superior yet, and the temperature suitability of that lake is questionable. Flathead catfish have been stocked sparingly in the Great Lakes and is not the mechanism responsible for their spread. A stocking in 1968 in Ohio may be one exception to this. Dispersal resulted from both natural range expansions and unauthorized introductions. The invasion is ongoing, with the species invading both from the east and the west to meet in northern Lake Michigan. Much of this invasion has likely taken place since the 1990s. This species has been documented to have significant impacts on native fishes in other areas where it has been introduced; therefore, educating the public not to release them into new waters is important. Frequent monitoring of rivers and lakes for the presence of this species would detect new populations early so that management actions could be utilized on new populations if desired.

Great Lakes↗

USGS2019

Evaluation of potential sources of sauger Sander canadensis for reintroduction into Lake Erie

Sauger ( Sander canadensis ) supported recreational and commercial fisheries in Lake Erie until the fishery collapsed in the early-1950s, with extirpation of sauger occurring soon after. Previous attempts to rebuild populations via stocking programs were unsuccessful, and the reasons for lack of success are unclear. The Ohio Department of Natural Resources-Division of Wildlife is re-examining the feasibility of reintroducing sauger because the current fish community and habitat conditions appear more suitable for sauger survival and proliferation. Selecting potential sources for reintroduction programs requires consideration of several factors. Donor and recipient ecosystems and life histories should be similar, the source population should have sufficient genetic diversity to withstand losses in diversity associated with hatchery practices, and the source and donor populations should have similar genetic diversity metrics and should be accessible while broodstock is developed. A review of the literature and a genetic analysis of historical sauger collections from Lake Erie and contemporary samples from possible donor populations in five different watersheds was performed to evaluate potential candidate sources for a re-introduction program. We compared genetic diversity, life history parameters, and ecosystem conditions of historical Lake Erie sauger to contemporary sauger populations from the Ohio River (Bellville, Meldahl, and New Cumberland pools), Missouri River, Ottawa River, Lake of the Woods, and Lake Winnebago. While life history and ecological conditions were similar across populations, there was genetic differentiation among potential donor sources and historical collections of sauger from Lake Erie, with contemporary populations from the Ohio River being most like historic Lake Erie sauger.

Lake Erie↗

USGS2003

Environmental fate and effects of the lampricide Bayluscide: A review

Bayluscide is an additive to TFM that increases the effectiveness of TFM as a lampricide. A review of the literature was undertaken to determine the environmental fate and effects of Bayluscide. Niclosamide (2′, 5-dichloro-4′-nitrosalicylanilide), the active ingredient of Bayluscide, degrades rapidly in natural water and sediment systems, however, the rate of degradation is very slow in autoclaved samples. This difference suggests that degradation under laboratory conditions is dependent on microbial activity and hydrolysis plays a minor role in degradation of niclosamide. The major degradation product of niclosamide has been reported to be aminoniclosamide (2′,5-dichloro-4′-aminosalicylanilide), which represented more than 50% of the residues extractable from sediments. Significantly more of the chemical is adsorbed to sediments with higher organic content and at lower pH's. The mobility of niclosamide in soil can be characterized as slight to medium; the estimated leaching distance would range from 0 to > 25 cm depending on the soil type and pH. The active ingredient of Bayluscide (niclosamide) is decomposed by ultra-violet light depending on the intensity and duration of the exposure. The uptake of residues by most invertebrates exposed to 14 C-niclosamide is fairly rapid and equilibrium is reached within 24 h. About 90% of the accumulated residues were lost within 48 h after the organisms were transferred to clean flowing water. As with invertebrates, fish rapidly accumulate and eliminate residues of niclosamide. Three distinct residues were isolated from the extracts of edible fillet tissue; parent niclosamide, the glucuronide conjugate of niclosamide, and the sulfate ester of niclosamide. Aquatic plants and agricultural crops do not appear to be adversely affected at concentrations of Bayluscide used for lamprey or snail control. Mayflies ( Hexagenia sp .). tend to be susceptible to TFM, but are relatively resistant to the effects of exposure to Bayluscide. Bayluscide was originally developed as a molluscicide to eliminate snails. Therefore, it is not surprising that mollusks are extremely sensitive to Bayluscide. Oral, dermal, and ocular administration of Bayluscide to mammals resulted in no clinical signs of systemic toxicity. Tests of the chronic effects of Bayluscide indicated that it is not mutagenic or carcinogenic. Bayluscide is not persistent in the environment; it breaks down in natural water and sediment systems through hydrolysis, photolysis, and microbial degradation. Given the limited use and tight control maintained by the U.S. Fish and Wildlife Service during applications of lampricides, Bayluscide presents minimal risk to human health and safety of the environment.

Conference Paper↗

USGS2013

Methylmercury is the predominant form of mercury in bird eggs: a synthesis

Bird eggs are commonly used in mercury monitoring programs to assess methylmercury contamination and toxicity to birds. However, only 6% of >200 studies investigating mercury in bird eggs have actually measured methylmercury concentrations in eggs. Instead, studies typically measure total mercury in eggs (both organic and inorganic forms of mercury), with the explicit assumption that total mercury concentrations in eggs are a reliable proxy for methylmercury concentrations in eggs. This assumption is rarely tested, but has important implications for assessing risk of mercury to birds. We conducted a detailed assessment of this assumption by (1) collecting original data to examine the relationship between total and methylmercury in eggs of two species, and (2) reviewing the published literature on mercury concentrations in bird eggs to examine whether the percentage of total mercury in the methylmercury form differed among species. Within American avocets ( Recurvirostra americana ) and Forster’s terns ( Sterna forsteri ), methylmercury concentrations were highly correlated (R 2 = 0.99) with total mercury concentrations in individual eggs (range: 0.03–7.33 μg/g fww), and the regression slope (log scale) was not different from one (m = 0.992). The mean percentage of total mercury in the methylmercury form in eggs was 97% for American avocets (n = 30 eggs), 96% for Forster’s terns (n = 30 eggs), and 96% among all 22 species of birds (n = 30 estimates of species means). The percentage of total mercury in the methylmercury form ranged from 63% to 116% among individual eggs and 82% to 111% among species means, but this variation was not related to total mercury concentrations in eggs, foraging guild, nor to a species life history strategy as characterized along the precocial to altricial spectrum. Our results support the use of total mercury concentrations to estimate methylmercury concentrations in bird eggs.

Environmental Science & Technology↗

USGS2000

Bacteria and Archaea in acidic environments and a key to morphological identification

Natural and anthropogenic acidic environments are dominated by bacteria and Archaea. As many as 86 genera or species have been identified or isolated from pH <4.5 environments. This paper reviews the worldwide literature and provide tables of morphological characteristics, habitat information and a key for light microscope identification for the non-microbiologist.

Hydrobiologia↗

USGS2003

Variability in geyser eruptive timing and its causes: Yellowstone National Park

Field data from Upper Geyser Basin, Yellowstone, indicate that geyser frequency is less sensitive to elastic deformation than might be surmised from a review of the literature. Earth-tide influences are not identifiable in any of the geysers we monitored. Though atmospheric-pressure influences are observed, only long-period variations on the order of 5 mBars or greater seem to influence geyser frequency. Long-distance interconnections between geysers are common and add to the difficulty of identifying strain influences. Additional variations in geyser periodicity may be governed by the internal dynamics of the geysers rather than external influences.

Geophysical Research Letters↗

USGS2008

Heat as a tracer to determine streambed water exchanges

This work reviews the use of heat as a tracer of shallow groundwater movement and describes current temperature-based approaches for estimating streambed water exchanges. Four common hydrologic conditions in stream channels are graphically depicted with the expected underlying streambed thermal responses, and techniques are discussed for installing and monitoring temperature and stage equipment for a range of hydrological environments. These techniques are divided into direct-measurement techniques in streams and streambeds, groundwater techniques relying on traditional observation wells, and remote sensing and other large-scale advanced temperature-acquisition techniques. A review of relevant literature suggests researchers often graphically visualize temperature data to enhance conceptual models of heat and water flow in the near-stream environment and to determine site-specific approaches of data analysis. Common visualizations of stream and streambed temperature patterns include thermographs, temperature envelopes, and one-, two-, and three-dimensional temperature contour plots. Heat and water transport governing equations are presented for the case of transport in streambeds, followed by methods of streambed data analysis, including simple heat-pulse arrival time and heat-loss procedures, analytical and time series solutions, and heat and water transport simulation models. A series of applications of these methods are presented for a variety of stream settings ranging from arid to continental climates. Progressive successes to quantify both streambed fluxes and the spatial extent of streambeds indicate heat-tracing tools help define the streambed as a spatially distinct field (analogous to soil science), rather than simply the lower boundary in stream research or an amorphous zone beneath the stream channel.

Water Resources Research↗

USGS2021

The ecology of river ice

Many of the world's rivers are ice-covered during winter months but increasing evidence indicates that the extent of river ice will shift substantially as winters warm. However, our knowledge of rivers during winter lags far behind that of the growing season, limiting our understanding of how ice loss will affect rivers. Physical, chemical, and biological processes change from headwaters to large rivers; thus, we expect ice processes and resulting effects on the ecology of rivers could also vary with river size, as a result of the associated changes in geomorphology, temperature regimes, and connectivity. To conceptualize these relationships, we review typically disparate literature on ice processes and winter ecology and compare what is known in the smallest and largest rivers. In doing so, we show that our ability to link ice with ecology across river networks is made difficult by a primary focus on ice processes in larger rivers and a lack of study of ecosystem processes during winter. To address some of these gaps, we provide new scenarios of river ice loss and analyses of how the annual importance of winter gross primary productivity (GPP) varies with river size. We show projected ice loss varied with large-scale watershed characteristics such as north-south orientation and that the importance of winter to annual GPP was greatest in the smallest rivers. Finally, we highlight information needed to fill knowledge gaps on winter across river networks and improve our understanding of how rivers may change as climate and ice regimes shift.

JGR Biogeosciences↗

USGS2010

Predicting the vertical structure of tidal current and salinity in San Francisco Bay, California

A two-dimensional laterally averaged numerical estuarine model is developed to study the vertical variations of tidal hydrodynamic properties in the central/north part of San Francisco Bay, California. Tidal stage data, current meter measurements, and conductivity, temperature, and depth profiling data in San Francisco Bay are used for comparison with model predictions. An extensive review of the literature is conducted to assess the success and failure of previous similar investigations and to establish a strategy for development of the present model. A σ plane transformation is used in the vertical dimension to alleviate problems associated with fixed grid model applications in the bay, where the tidal range can be as much as 20–25% of the total water depth. Model predictions of tidal stage and velocity compare favorably with the available field data, and prototype salinity stratification is qualitatively reproduced. Conclusions from this study as well as future model applications and research needs are discussed.

California↗

USGS2001

Partitioning sources of variation in vertebrate species richness

Aim: To explore biogeographic patterns of terrestrial vertebrates in Maine, USA using techniques that would describe local and spatial correlations with the environment. Location: Maine, USA. Methods: We delineated the ranges within Maine (86,156 km2) of 275 species using literature and expert review. Ranges were combined into species richness maps, and compared to geomorphology, climate, and woody plant distributions. Methods were adapted that compared richness of all vertebrate classes to each environmental correlate, rather than assessing a single explanatory theory. We partitioned variation in species richness into components using tree and multiple linear regression. Methods were used that allowed for useful comparisons between tree and linear regression results. For both methods we partitioned variation into broad-scale (spatially autocorrelated) and fine-scale (spatially uncorrelated) explained and unexplained components. By partitioning variance, and using both tree and linear regression in analyses, we explored the degree of variation in species richness for each vertebrate group that Could be explained by the relative contribution of each environmental variable. Results: In tree regression, climate variation explained richness better (92% of mean deviance explained for all species) than woody plant variation (87%) and geomorphology (86%). Reptiles were highly correlated with environmental variation (93%), followed by mammals, amphibians, and birds (each with 84-82% deviance explained). In multiple linear regression, climate was most closely associated with total vertebrate richness (78%), followed by woody plants (67%) and geomorphology (56%). Again, reptiles were closely correlated with the environment (95%), followed by mammals (73%), amphibians (63%) and birds (57%). Main conclusions: Comparing variation explained using tree and multiple linear regression quantified the importance of nonlinear relationships and local interactions between species richness and environmental variation, identifying the importance of linear relationships between reptiles and the environment, and nonlinear relationships between birds and woody plants, for example. Conservation planners should capture climatic variation in broad-scale designs; temperatures may shift during climate change, but the underlying correlations between the environment and species richness will presumably remain.

Journal of Biogeography↗

USGS1998

Rheological equations in asymptotic regimes of granular flow

This paper assesses the validity of the generalized viscoplastic fluid (GVF) model in light of the established constitutive relations in two asymptotic flow regimes, namely, the macroviscous and grain-inertia regimes. A comprehensive review of the literature on constitutive relations in both regimes reveals that except for some material constants, such as the coefficient of restitution, the normalized shear stress in both regimes varies only with the grain concentration, C . It is found that Krieger-Dougherty's relative viscosity, μ * ( C ), is sufficiently coherent among the monotonically nondecreasing functions of C used in describing the variation of the shear stress with C in both regimes. It not only accurately represents the C -dependent relative viscosity of a suspension in the macroviscous regime, but also plays a role of the radial distribution function that describes the statistics of particle collisions in the grain-inertia regime. Use of μ * ( C ) alone, however, cannot link the two regimes. Another parameter, the shear-rate number, N , is needed in modeling the rheology of neutrally buoyant granular flows in transition between the two asymptotic regimes. The GVF model proves compatible with most established relations in both regimes.

Journal of Engineering Mechanics↗

USGS2011

Strong evidence for terrestrial support of zooplankton in small lakes based on stable isotopes of carbon, nitrogen, and hydrogen

Cross-ecosystem subsidies to food webs can alter metabolic balances in the receiving (subsidized) system and free the food web, or particular consumers, from the energetic constraints of local primary production. Although cross-ecosystem subsidies between terrestrial and aquatic systems have been well recognized for benthic organisms in streams, rivers, and the littoral zones of lakes, terrestrial subsidies to pelagic consumers are more difficult to demonstrate and remain controversial. Here, we adopt a unique approach by using stable isotopes of H, C, and N to estimate terrestrial support to zooplankton in two contrasting lakes. Zooplankton ( Holopedium , Daphnia, and Leptodiaptomus ) are comprised of ≈20–40% of organic material of terrestrial origin. These estimates are as high as, or higher than, prior measures obtained by experimentally manipulating the inorganic 13 C content of these lakes to augment the small, natural contrast in 13 C between terrestrial and algal photosynthesis. Our study gives credence to a growing literature, which we review here, suggesting that significant terrestrial support of pelagic crustaceans (zooplankton) is widespread.

Wisconsin↗

USGS1984

Observer visitation frequency and success of mourning dove nests: A field experiment

Field studies of nesting success generally require visits by the investigator to the nests under study. Such visits may themselves influence nesting success, however, and this possibility has been discussed and investigated by a number of workers with a variety of bird species. Livezey (1980) reviewed the relevant literature for duck nests and noted that most studies failed to demonstrate differences in nesting success between visited nests and those not visited. Livezey (1980) found in his own work that nest abandonment may have occurred as a result of disturbance by observers but that nest predation was not related to time spent by observers at nests or number of observers approaching nests. Various components of nesting and breeding success in seabirds are thought to be adversely affected by human disturbance and nest visitation (Gillett et al. 1975, Robert and Ralph 1975, Ollason and Dunnet 1980). Upland, ground-nesting species have also been studied (e.g. Stoddard 1931, Evans and Wolfe 1967, Henry 1969, Roseberry and Klimstra 1970, Klimstra and Roseberry 1975), and, although conclusions have varied, a number of these workers found no effect of observers on nest-predation rates.

The Auk↗

USGS2000

The AOU Conservation Committee Review of the biology, status, and management of Cape Sable Seaside Sparrows: Final report

The Cape Sable Seaside Sparrow ( Ammodramus maritimus mirabilis ) was listed as an original member of the federal list of endangered species in 1968. It is restricted to seasonally flooded prairies of extreme southern Florida and is disjunct from all other conspecific breeding populations (Kushlan et al 1982, McDonald 1988). Since the subspecies was described in 1919, its populations have been discovered and rediscovered, often only to disappear or decline to a handful of individuals (Werner and Woolfenden 1983, Kushlan and Bass 1983). Although the sparrow historically is known from six distinct areas, at present only two of these areas support populations numbering in the hundreds or low thousands of individuals. Debates swirl around the status of these remnant populations. The main controversy encompasses whether the sparrow, now largely restricted to Everglades National Park, is in jeopardy of global extinction and if so, what actions must be taken to prevent this from happening. In November 1998, a panel of scientists was assembled under the auspices of the Conservation Committee of the American Ornithologists' Union (AOU) to evaluate the scientific evidence relevant to this controversy. The Panel was charged with scrutinizing the evidence for the existence and probable causes of global population decline in this subspecies, evaluating proposed management actions, and suggesting further research necessary to manage the remaining populations to maximize their chances of long-term persistence. This document presents the conclusions of the Panel, which are based on our reading of the peer-reviewed and “gray” literature, interactions during a workshop held 9 to 11 February 1999 at Florida International University in Miami with researchers investigating the sparrow's biology, and site visits associated with the workshop. In addition, researchers provided the Panel with position papers summarizing their findings and conclusions prior to the workshop and provided information in response to specific questions following the workshop. Further information was obtained through public comment on an initial draft of this report.

The Auk↗

USGS2006

G-banded karotype and ideogram for the critically endangered North Atlantic right whale (Eubalanea glacialis)

Published cytogenetic data for extant cetacean species remain incomplete. In a review of the literature, we found karyotypic information for 6 of the 13 tentatively recognized species of the suborder Mysticeti (baleen whales). Among those yet to be described is the critically endangered North Atlantic right whale (Eubalaena glacialis). Herein, we describe and propose a first-generation G-banded karyotype and ideogram for this species (2n = 42), obtained from peripheral blood chromosome preparations from a stranded male calf. This information may prove useful for future genetic mapping projects and for interspecific and intraspecific genomic comparisons by techniques such as zoo-FISH.

Journal of Heredity↗