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USGS2018

The North American carbon budget: Past, present, and future

This chapter nicely summarizes and synthesizes the latest scientific information on the North American carbon budget by incorporating terrestrial, anthropogenic, aquatic, and coastal margin CO 2 and CH 4 dynamics. Starting with a historical context, the chapter summarizes current understanding of the magnitudes and trends of carbon stocks and fluxes at the continental scale. It also provides a regional context by stratifying the continent to countries and climate assessment regions and discusses the societal drivers, impacts, and carbon management decisions. Knowledge gaps and research needs are also identified. This chapter is well-written and clearly organized, and provides a broad context beyond individual chapters. Some of the main ways the chapter can be improved include the following: some work is needed on the Key Findings (discussed below); the goals and objectives should be explicitly described; critical content areas missing from the chapter are interannual variability of carbon fluxes and impacts of severe and extended droughts; indicators and feedbacks are missing from Section 2.4; consistent use of units is recommended; numbers with 3-4 significant digits over-state the confidence the reader should have, and all numbers should include uncertainties. And one broader concern to note: This chapter follows the global overview in Chapter 1, where “sinks” are sinks in the cycle perturbed by anthropogenic CO 2 and CH 4 , and the assumption is that globally, the net unperturbed background sinks are zero summed across all reservoirs. Yet in this chapter, “sinks” are net fluxes out of the atmosphere, background + perturbation. For the coastal ocean, inland waters, etc.—where lateral transport is significant—these sources and sinks include background/pre-industrial fluxes that are balanced by fluxes elsewhere. These distinctions must be made clear so that the reader is not given an impression of a greater or lesser sink for anthropogenic CO 2 than is there (e.g., P74, lines 4-6).

Book chapter↗

USGS2006

The toxicological geochemistry of Earth materials: An overview of processes and the interdisciplinary methods used to understand them

A broad spectrum of earth materials have been linked to, blamed for, and/or debated as sources for disease. In some cases, the links are clear. For example, excessive exposures to mineral dusts have long been recognized for their role in diseases such as: asbestosis, mesothelioma, and lung cancers (asbestos); silicosis and lung cancer (silica dusts); and coal-workers pneumoconiosis (coal dust). Lead poisoning, particularly in toddlers and young children, has been conclusively linked to involuntary ingestion of soils or other materials contaminated with lead-rich paint particles, leaded gasoline combustion byproducts, and some types of lead-rich mine wastes or smelter particulates. Waters with naturally elevated arsenic contents are common in many regions of the globe, and consumption of these waters has been documented as the source of arsenic-related diseases affecting thousands of people in south Asia and other regions. Exposure to dusts or soils containing pathogens has been documented as the cause of regionally common diseases such as valley fever (coccidioidomycosis) and much rarer diseases such as anthrax. Links between many other earth materials and specific diseases, although suspected, are less clear or are debated. For example, it has been suggested that geographic clusters of diseases such as leukemia are related to exposures to waters or atmospheric particulates containing organic or metal contaminants; however, for many clusters the exact causal relationships between disease and environmental exposure are difficult to prove conclusively. Even for many diseases in which the causal relationship is clear, such as in asbestosis and mesothelioma triggered by asbestos exposure, the minimum exposures needed to trigger disease, the influence of genetic factors, and the exact mechanisms of toxicity are still incompletely understood and are the focus of considerable debate within the public health community. Hence, understanding the health effects resulting from occupational and environmental exposures to a wide variety of earth materials remains a very active and fruitful area of research.

Reviews in Mineralogy and Geochemistry↗

USGS1997

Concentrations of chlorinated organic compounds in biota and bed sediment in streams of the San Joaquin Valley, California

Samples of resident biota and bed sediments were collected in 1992 from 18 sites on or near the floor of the San Joaquin Valley, California, for analysis of 33 organochlorine compounds. The sites were divided into five groups on the basis of physiographic region and land use. Ten compounds were detected in tissue, and 15 compounds were detected in bed sediment. The most frequently detected compound in both media was p,p'-DDE. Concentrations of ??DDT (sum of o,p'- and p, p' forms of DDD, DDE, and DDT) were statistically different among groups of sites for both tissue and sediment (Kruskal- Wallis, p < 0.05). Concentrations in both media were highest in streams draining the west side of the valley. Concentrations of ??DDT in tissue were significantly correlated with specific conductance, pH, and total alkalinity (p < 0.05), which are indicators of the proportion of irrigation return flows in stream discharge. Concentrations in sediment on a dry-weight basis were not correlated with these water-quality parameters, but total organic carbon (TOC) normalized concentrations were significantly correlated with specific conductance and pH (p < 0.05). Regressions of the concentration of ??DDT in tissue, as a function of ??DDT in bed sediment, were significant and explained up to 76% of the variance in the data. The concentration of ??DDT in sediment may be related to mechanisms of soil transport to surface water with bioavailability of compounds related to the concentration of TOC in sediment. The results of this study did not indicate any clear advantage to using either bed sediment or tissues in studies of organochlorine chemicals in the environment. Some guidelines for protection of fish and wildlife were exceeded. Concentrations of organochlorine chemicals in biota, and perhaps sediment, have declined from concentrations measured in the 1970s and 1980s, but remain high compared to other regions of the United States.

Archives of Environmental Contamination and Toxico↗

USGS2004

Acoustic and optical borehole-wall imaging for fractured-rock aquifer studies

Imaging with acoustic and optical televiewers results in continuous and oriented 360° views of the borehole wall from which the character, relation, and orientation of lithologic and structural planar features can be defined for studies of fractured-rock aquifers. Fractures are more clearly defined under a wider range of conditions on acoustic images than on optical images including dark-colored rocks, cloudy borehole water, and coated borehole walls. However, optical images allow for the direct viewing of the character of and relation between lithology, fractures, foliation, and bedding. The most powerful approach is the combined application of acoustic and optical imaging with integrated interpretation. Imaging of the borehole wall provides information useful for the collection and interpretation of flowmeterand other geophysical logs, core samples, and hydraulic and water-quality data from packer testing and monitoring.

Journal of Applied Geophysics↗

USGS2005

Regeneration of native trees in the presence of invasive saltcedar in the Colorado River Delta, Mexico

Many riparian zones in the Sonoran Desert have been altered by elimination of the normal flood regime; such changes to the flow regime have contributed to the spread of saltcedar (Tamarix ramosissma Ledeb.), an exotic, salt-tolerant shrub. It has been proposed that reestablishment of a natural flow regime on these rivers might permit passive restoration of native trees, without the need for aggressive saltcedar clearing programs. We tested this proposition in the Colorado River delta in Mexico, which has received a series of large-volume water releases from U.S. dams over the past 20 years. We mapped the vegetation of the delta riparian corridor through ground and aerial surveys (1999–2002) and satellite imagery (1992–2002) and related vegetation changes to river flood flows and fire events. Although saltcedar is still the dominant plant in the delta, native cottonwood ( Populus fremontii S. Wats.) and willow (Salix gooddingii C. Ball) trees have regenerated multiple times because of frequent flood releases from U.S. dams since 1981. Tree populations are young and dynamic (ages 5–10 years). The primary cause of tree mortality between floods is fire. Biomass in the floodplain, as measured by the normalized difference vegetation index on satellite images, responds positively even to low-volume (but long-duration) flood events. Our results support the hypothesis that restoration of a pulse flood regime will regenerate native riparian vegetation despite the presence of a dominant invasive species, but fire management will be necessary to allow mature tree stands to develop.

Colorado River Delta↗

USGS2024

Iodine-129 in the eastern Snake River Plain aquifer at and near the Idaho National Laboratory, Idaho, 2021–22

Between the 1950s and 1980s, wastewater generated at the Idaho National Laboratory contained Iodine-129 ( 129 I); this wastewater was discharged directly into the eastern Snake River Plain (ESRP) aquifer through a deep disposal well, unlined infiltration ponds, or leaked from distribution systems below industrial facilities. During 2021–22, the U.S. Geological Survey, in cooperation with the U.S. Department of Energy and the Idaho Department of Environmental Quality Idaho National Laboratory Oversight Program, collected groundwater samples from 64 monitoring wells in the ESRP aquifer, 6 of which are part of a multilevel monitoring system, to determine the concentration of 129 I in the groundwater. These samples were analyzed by accelerator mass spectrometry as part of a long-term ongoing study to track trends and occurrences of this carcinogenic, long-lived radionuclide in the environment. Concentrations ranged from slightly above the locally determined background concentration of 5.4×10 −6 picocuries per liter, to just below the U.S. Environmental Protection Agency’s maximum contaminant level of 1 picocurie per liter. Discharge of wastewater containing 129 I has been discontinued to the aquifer, and long-term trends from a subset (n=15) of sampled wells show decreasing 129 I concentrations over the last three decades. Concentrations of 129 I in groundwater from monitoring wells near facilities at the Idaho National Laboratory are affected by episodic recharge from an ephemeral surface-water source and by the fracture-flow dominated hydrologic regime in the ESRP aquifer. The spatially focused sampling effort has also identified a low-level 129 I plume that affects long-term water quality near and downgradient from the Advanced Test Reactor Complex in the southwestern part of the facility that had not been clearly defined in previous sampling efforts, although the definition of the plume is somewhat limited by available data.

Idaho↗

USGS2025

Comparative olfactory and behavioral response of grass carp ( Ctenopharyngodon idella ), bighead carp ( Hypophthalmichthys nobilis ), silver carp ( H. molitrix ) and black carp ( Mylopharyngodon piceus ) to chemical stimuli

Grass carp ( Ctenopharyngodon idella ), bighead carp ( Hypophthalmichthys nobilis ), silver carp (H. molitrix), and black carp ( Mylopharyngodon piceus ), collectively “invasive carp,” represent an ongoing management problem in the Mississippi and Missouri River basins of North America. Development of strategies to control their populations are also ongoing. As a follow-up to previous research, we tested two amino acids and an amino acid-based commercial feeding stimulant as olfactory stimulants that may attract or repel these species. We employed a two-pronged approach to test how invasive carp respond to the olfactory stimulants, using an electro-olfactogram (EOG) to measure olfactory response and a tank with a stimulant in one half to test behavioral response. Consistent with previous research, we found grass carp had a higher magnitude of EOG response to stimulants compared to bighead and, marginally, silver carp. Bighead, silver, and black carp did not differ from each other in EOG response. Grass carp produced significantly greater lysine and a marginally greater alanine EOG response than bighead and silver carp and significantly greater commercial feeding stimulant response than bighead carp. Black carp had marginally greater lysine response than bighead carp. In the behavioral tests, grass carp generally avoided the stimuli tested, while bighead carp were generally attracted to stimuli. Neither black nor silver carp showed a clear attraction or avoidance toward the stimuli tested. To further evaluate these solutions for management applications additional testing in ponds or open water may be necessary.

Management of Biological Invasions↗

USGS2012

Stable water isotopologue ratios in fog and cloud droplets of liquid clouds are not size-dependent

In this work, we present the first observations of stable water isotopologue ratios in cloud droplets of different sizes collected simultaneously. We address the question whether the isotope ratio of droplets in a liquid cloud varies as a function of droplet size. Samples were collected from a ground intercepted cloud (= fog) during the Hill Cap Cloud Thuringia 2010 campaign (HCCT-2010) using a three-stage Caltech Active Strand Cloud water Collector (CASCC). An instrument test revealed that no artificial isotopic fractionation occurs during sample collection with the CASCC. Furthermore, we could experimentally confirm the hypothesis that the δ values of cloud droplets of the relevant droplet sizes (μm-range) were not significantly different and thus can be assumed to be in isotopic equilibrium immediately with the surrounding water vapor. However, during the dissolution period of the cloud, when the supersaturation inside the cloud decreased and the cloud began to clear, differences in isotope ratios of the different droplet sizes tended to be larger. This is likely to result from the cloud's heterogeneity, implying that larger and smaller cloud droplets have been collected at different moments in time, delivering isotope ratios from different collection times.

Atmospheric Chemistry and Physics↗

USGS2000

Borehole-wall imaging with acoustic and optical televiewers for fractured-bedrock aquifer investigations

Imaging with acoustic and optical televiewers results in continuous and oriented 360 degree views of the borehole wall from which the character and orientation of lithologic and structural features can be defined for fractured-bedrock aquifer investigations. Fractures are more clearly defined under a wider range of conditions on acoustic images than on optical images including dark-colored rocks, cloudy borehole water, and coated borehole walls. However, optical images allow for the direct viewing of the character of and relation between lithology, fractures, foliation, and bedding. The most powerful approach is the combined application of acoustic and optical imaging with integrated interpretation. Borehole-wall imaging provides information useful for the collection and interpretation of flowmeter and other geophysical logs, core samples, and hydraulic and water-quality data from packer testing and monitoring.

Conference Paper↗

USGS1999

Mapping the glacial geology of the Central Great Lakes region in three dimensions: A model for state-federal cooperation

Planners need to evaluate complex and competing public-policy options for managing water, land, and biological resources; they must ensure economic growth, meet the needs of an increasing population, assess hazards, and manage the environment in a sustainable manner. The State Geological Surveys of Illinois, Indiana, Michigan, and Ohio and the U.S. Geological Survey (USGS) receive many requests from local, State, and Federal planners and officials for geologic information. Thick and complex layers of glacial and related sediments blanket the bedrock of these States: a three-dimensional understanding of these deposits is critical to making informed resource-management and other planning decisions. At two recent forums (in Indianapolis, March 1997, and Columbus, Ohio, February 1999), more than 200 attendees from more than 60 local, State, and Federal agencies provided a clear message. They need three-dimensional geologic information to use in making decisions on the following issues: • Quality, quantity, distribution, and accessibility of surface and ground water • Aggregate sources and land-use conflicts • Energy and mineral resource management • Environmental management and mitigation of land and water contamination • Acceleration of the permitting processes of regulatory agencies • Industrial, commercial, residential, and infrastructure siting and construction • Agricultural land loss, erosion, sedimentation, and agrichemical use • Waste-disposal planning and mitigation • Habitat alteration and biodiversity • Coastal erosion, landslides, radon, floods, and earthquakes

Illinois, Indiana, Michigan, Ohio↗

USGS2001

Effects of forest-management activities on runoff components and ground-water recharge to Quabbin Reservoir, central Massachusetts

The effects of forest-management activities (timber cutting and herbicide application) on runoff components (total streamflow, direct runoff, and base flow) and on ground-water recharge per unit area were evaluated for two separate paired drainage basins of Quabbin Reservoir in central Massachusetts. The Cadwell Creek study area, studied from 1962-1973, included an experimental basin (Upper Cadwell Creek) and a control basin (Lower Cadwell Creek). In the experimental basin, herbicide was applied to mixed oaks, northern hardwoods, and understory vegetation in different riparian zones during the summers of 1967 and 1968, and some pine plantations were thinned or clear-cut during the winter of 1967-1968. These forest-management activities decreased the total basal area by about 34%. The decrease in total basal area resulted in an increase in total streamflow, direct runoff (total streamflow minus base flow), and ground-water recharge for six dormant seasons (October-April) and six growing seasons (May-September) during 1968-1973. Base flow increased for three dormant seasons and two growing seasons during 1968-1970 and the dormant seasons of 1971 and 1973. Base flow accounted for 34% and direct runoff accounted for 66% of the 94 mm (15%) increase in total streamflow during water years 1968-1973. Sixty-one percent of this increase in total streamflow occurred in the dormant seasons. The Dickey Brook study area, studied from 1985-1989, included an experimental basin (Dickey Brook) and a control basin (Dickey Brook Tributary). Some pine plantations were thinned or clear-cut in the headwaters of the experimental basin from October 1986 to March 1987 and October to December 1988. These forest-management activities decreased the total basal area by 24% during 1986-1987 and an additional 8% during 1988. The decrease in total basal area resulted in an increase in total streamflow, base flow, and ground-water recharge for only one dormant season and one growing season in 1987. Direct runoff only increased slightly during the 1987 dormant season. Base flow accounted for 91% and direct runoff accounted for 9% of the 92 mm (21%) increase in total streamflow during water year 1987. Seventy-seven percent of this increase in total streamflow occurred in the dormant season.

Conference Paper↗

USGS1985

Hydrology of Lake June in winter, Highlands County, South-central Florida

Lake June in Winter is in central Highlands County near the town of Lake Placid in south-central Florida. Recreation and citrus-grove irrigation are the major uses of lake water. Land use around the lake is residential citrus, and undeveloped. Most of the land use in the 44-square mile lake-drainage area is undeveloped. The surface area of the lake is approximately 5.7 square miles with water-surface altitude average of 74 feet. The extremes in lake altitude for the period 1945-82 were 77.58 feet in October 1948, and 71.62 feet in May 1981. Flow into Lake June in Winter is from Lake Placid to the south through Catfish Creek. Flow out of the Lake is northward through Stearns Creek to Lake Francis, and eventually by Josephine Creek to Lake Istokpoga. The quality of water in Lake June in Winter is good. Specific conductance was found to be generally low, ranging between 90 umho/cm to 170 umho/cm, indicating a lack of dissolved solids present in the lake. The lake is clear, with transparency values between 3 and 14 feet. Total nitrogen was found to be 0.60 mg/L indicating a minimal effect from nitrogen fertilizer washoff or septic-tank discharge. (USGS)

Water-Resources Investigations Report↗

USGS2009

Coldwater fish in small standing waters

This chapter describes standard techniques for sampling coldwater fishes in small standing waters. Within the context of this book, coldwater fish species are those that prefer water temperatures less than 15°C, and small standing waters are lakes and reservoirs where surface area is less than 200 ha. Chapter 7 of this book describes sampling coldwater fishes in large standing waters (i.e., surface area > 200 ha). The criterion that separates small and large waters is arbitrary and does not imply that different methods are required depending on, for example, whether a lake is 199 or 201 ha. Two chapters are dedicated to sampling coldwater fishes in standing waters because lake size varies by several orders of magnitude and some differences in sampling methods are needed to achieve efficient sampling at both ends of the lake-size continuum. Although it is clear that some differences in methods are necessary to accommodate extremes in lake sizes, it is not clear when the transition from methods for small lakes to methods for large lakes should apply. To bridge this gap, we describe methods of sampling coldwater fish in small lakes and reservoirs that are compatible with a subset of the methods proposed for coldwater fish in large lakes and reservoirs (see Chapter 7). The method proposed for sampling coldwater fish in small standing waters is depth-stratified summer gill netting. We acknowledge that coldwater species often inhabit the same lakes and reservoirs as warmwater fish. Thermal stratification during summer influences the depth distribution of coldwater and warmwater species, and a depth-stratified survey can sample both temperature guilds. For this reason, gill-netting methods for sampling coldwater fishes have been chosen so that they are compatible with gill-netting methods proposed for sampling warmwater fishes (i.e., Chapters 2 and 3).

Book chapter↗

USGS2002

Limitations in the use of commercial humic acids in water and soil research

Seven samples of commercial "humic acids", purchased from five different suppliers, were studied, and their characteristics were compared with humic and fulvic acids isolated from streams, soils, peat, leonardite, and a dopplerite sample. Cross-polarization and magic-angle spinning 13C NMR spectroscopy clearly shows pronounced differences between the commercial materials and all other samples. Elemental and infrared spectroscopic data do not show such clear-cut differences but can be used as supportive evidence, with the 13C NMR data, to substantiate the above distinctions. As a result of these differences and due to the general lack of information relating to the source, method of isolation, or other pretreatment of the commercial materials, these commercial products are not considered to be appropriate for use as analogues of true soil and water humic substances, in experiments designed to evaluate the nature and reactivity of humic substances in natural waters and soils.

Environmental Science & Technology↗

USGS2000

Processing strategy for water-gun seismic data from the Gulf of Mexico

In order to study the regional distribution of gas hydrates and their potential relationship to a large-scale sea-fl oor failures, more than 1,300 km of near-vertical-incidence seismic profi les were acquired using a 15-in3 water gun across the upper- and middle-continental slope in the Garden Banks and Green Canyon regions of the Gulf of Mexico. Because of the highly mixed phase water-gun signature, caused mainly by a precursor of the source arriving about 18 ms ahead of the main pulse, a conventional processing scheme based on the minimum phase assumption is not suitable for this data set. A conventional processing scheme suppresses the reverberations and compresses the main pulse, but the failure to suppress precursors results in complex interference between the precursors and primary refl ections, thus obscuring true refl ections. To clearly image the subsurface without interference from the precursors, a wavelet deconvolution based on the mixedphase assumption using variable norm is attempted. This nonminimum- phase wavelet deconvolution compresses a longwave- train water-gun signature into a simple zero-phase wavelet. A second-zero-crossing predictive deconvolution followed by a wavelet deconvolution suppressed variable ghost arrivals attributed to the variable depths of receivers. The processing strategy of using wavelet deconvolution followed by a secondzero- crossing deconvolution resulted in a sharp and simple wavelet and a better defi nition of the polarity of refl ections. Also, the application of dip moveout correction enhanced lateral resolution of refl ections and substantially suppressed coherent noise.

Bulletin↗

USGS2000

Benthic foraminifera and environmental changes in Long Island Sound

Benthic foraminiferal faunas in Long Island Sound (LIS) in the 1940s and 1960s were of low diversity, and dominated by species of the genus Elphidium , mainly Elphidium excavatum clavatum , with common Buccella frigida and Eggerella advena . The distribution of these species was dominantly correlated with depth, but it was not clear which depth-related environmental variable was most important. Differences between faunas collected in 1996 and 1997, and in the 1940s and 1960s include a strong decrease in relative abundance of Eggerella advena over all LIS, an increase in relative abundance of Ammonia beccarii in western LIS, and a decrease in species diversity. The decreased diversity suggests that environmental stress caused the faunal changes. Oxygen isotope data for E. excavatum clavatum indicate that a change in salinity is not a probable cause. Carbon isotope data suggest that the supply of organic matter to the benthos increased since the early 1960s, with a stronger increase in western LIS where algal blooms have occurred since the early 1970s, possibly as a result of nutrient input by waste water treatment plants. These blooms or the resulting episodes of anoxia/hypoxia may have played a role in the increased relative abundance of A. beccarii . There is no clear explanation for the decreased abundance of E. advena , but changes in the phytoplankton composition (thus food supply) are a possible cause. Benthic foraminiferal faunal and stable isotope data have excellent potential as indicators of physicochemical environmental changes and their effects on the biota in LIS.

Connecticut, New York↗

USGS1964

Bottom sediments of Saginaw Bay, Michigan

Saginaw Bay is a southwest extension of Lake Huron on the east shore of the Southern Peninsula of Michigan. It is a shallow-water derivative of the Pleistocene Lake Saginaw. Sixty-one bottom samples were collected on a semigrid pattern and analyzed physically. Findings were treated statistically. Sediments range in size from large pebbles to clay. Medium- to fine-grained clear quartz sand is common to all parts of the bay. Currents and wave action are primarily responsible for both median diameter and sorting distribution patterns. Only a very general correlation can be established between depth and median diameter. Heavy minerals occur in abundance locally and show an affinity to shallow-water areas subject to prevailing currents. Shape also locally determines heavy mineral concentrations. Only general conclusions can be established from roundness and sphericity and acid-soluble content. Increased organic content is correlative with quiet water environments. The shallow-water, heterogeneous nature of Saginaw Bay is not conducive to the recognition of sedimentary criteria suitable for correlations in other than a local environment.

Journal of Sedimentary Petrology↗

USGS2010

Comment on RamaRao et al. [1995] and LaVenue et al. [1995]

A method for stochastic modeling of groundwater flow systems using a combination of pilot point parameterization and conditional simulation was presented by RamaRao et. al [1995] and LaVenue et. al [1995]. (We will collectively term these two papers RLMM and term the method developed in RLMM the CS method here.) RLMM (pp. 478-479) state that the CS method is intended to provide a frequency distribution of possible alternative spatial transmissivity T distributions that (1) are statistically similar to the observed T distribution, (2) are equally likely given the calibration data, and (3) closely reproduce the measured pressures. The frequency distribution of transmissivities is then used to form frequency distribution of derived functions, such as travel times, which are summarized in the form of uncertainty measures, such as (RLMM, p. 512) "confidence (or tolerance) intervals," on the actual values, which in the case of travels times, are values that could occur sometime in the future (RLMM, p.513). Cooley [2000] analyzes the RLMM method using linearization and bootstrap theory and concludes that that the method can yield accurate uncertainty estimates but only under some limited circumstances. In this comment we use Cooley's analysis to critique the method. We also identify and discuss some statements made my by RLMM about model calibration and their methodology that appear to be misleading. It is unusual to comment on a paper so long after publication. Subsequent work has expanded the method of RLMM, and the method was used advantageously in the testing documented by Zimmerman et. al [1998], so it is clear the method has significant strengths. We go back to the 1995 papers for this comment, however, because they display most clearly the methodological difficulties with which we are concerned.

Water Resources Research↗