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USGS2015

A hidden view of wildlife conservation: How camera traps aid science, research and management

Florida panthers are among the world’s most endangered — and elusive — animals. For approximately four decades, scientists have been researching this small population of panthers that inhabit the dense forests and swamps of south Florida. Because of their wide habitat range along with an absence of clear visual features, these animals are difficult to detect and identify. In 2013, however, researchers released a study that used camera trap images collected between 2005 and 2007 to generate the first statistically reliable density estimates for the remaining population of this subspecies. Camera traps — remotely activated cameras with infrared sensors — first gained measurable popularity in wildlife conservation in the early 1990s. Today, they’re used for a variety of activities, from species-specific research to broad-scale inventory or monitoring programs that, in some cases, attempt to detect biodiversity across vast landscapes. As this modern tool continues to evolve, it’s worth examining its uses and benefits for wildlife management and conservation.

The Wildlife Professional↗

USGS2025

Foundational science in flight—USGS bird programs support conservation, culture, and a thriving U.S. economy

Birds are vital to our economy, ecosystems, and cultural heritage. Investing in bird conservation benefits communities, businesses, and working lands while reinforcing our nation’s legacy of stewardship and biodiversity. By valuing birds, we ensure a richer, healthier, and more vibrant future for all Americans. The USGS leads two national bird monitoring programs Thriving bird populations contribute over $ 100 billion in related purchases to the U.S. economy annually, helping to support 1.4 million jobs and $ 90 billion in labor-related income. Across our nation, Federal and State wildlife agencies, Flyway Councils, non-governmental organizations, and more consider data from the U.S. Geological Survey’s (USGS) Bird Banding Laboratory (BBL) and Breeding Bird Survey (BBS) to be critical to meeting their mandates to set healthy harvest levels and in identifying species of conservation need. However, without stable and sufficient resources for the BBL and BBS, the capacity to monitor and address the rapidly evolving needs of migratory bird populations is at risk, jeopardizing the foundation of collaborative conservation efforts across North America.

Fact Sheet↗

USGS2024

Environmental DNA

The widespread adoption of environmental DNA (eDNA) detection tools for biodiversity monitoring has led to the need for universal data standards to inform principled eDNA data applications. Improvements in understanding the meaning and possible uncertainty of eDNA data can minimize erroneous conclusions, increase confidence in eDNA data, and maximize conservation outcomes. -Environmental DNA (eDNA) is the genetic material left by organisms in the environment. -eDNA is increasingly being used to detect the presence of species and assess biodiversity, but broad-scale best practices are still being developed. -This affects the quality, accessibility, and usefulness of data. -Non-invasive eDNA sampling can complement or enhance conventional approaches, as it can be a highly sensitive, rapid, and cost-effective tool for biodiversity monitoring. -Creating unified eDNA data best practices and developing DNA reference libraries will ensure eDNA detection methods are applied consistently to accurately inform conservation and wildlife management.

Report↗

USGS2026

A new inventory and conservation assessment of United States islands

To support conservation-focused research and management we developed a new 30-m resolution polygon data layer of the nonlacustrine and nonriverine islands of the United States, with associated attributes describing key physical and conservation geography characteristics. Islands were grouped into a three-tiered hierarchy of island regions (twelve), island provinces (twenty-eight), and individual islands (19,023). Islands were classified as either continental or oceanic based on their physiographic position relative to the North America continental shelf, and estuarine versus nonestuarine depending on their location within or external to estuaries. For each island we assessed the diversity of terrestrial and coastal ecosystems, the number of threatened and endangered (T&E) species listed under the Endangered Species Act, the number of T&E species critical habitats, the number of migratory bird species listed under the Migratory Bird Treaty Act, the number of Key Biodiversity Areas, and the number of and management responsibility for protected areas. We conclude that the conservation importance of islands is disproportionate to their total area as, for example, islands contain 52 percent of the T&E species yet their total area is only 2 percent of the area of the continental mainland. Similarly, of the global total of 431 World Terrestrial Ecosystems, 201 (47 percent) occur on U.S. islands compared with 286 (66 percent) that occur on the U.S. continental mainland.

Annals of the American Association of Geographers↗

USGS2020

Preparing wildlife for climate change: How far have we come?

Global biodiversity is in unprecedented decline and on-the-ground solutions are imperative for conservation. Although there is a large volume of evidence related to climate change effects on wildlife, research on climate adaptation strategies is lagging. To assess the current state of knowledge in climate adaptation, we conducted a comprehensive literature review and evaluated 1,346 peer-reviewed publications for management recommendations designed to address the consequences of climate change on wildlife populations. From 509 publications, we identified 2,306 recommendations and employed both qualitative and quantitative methods for data analysis. Although we found an increase in the volume and diversity of recommendations since 2007, a focus on protected areas (26%, 596 of 2,306 recommendations) and the non-reserve matrix (12%, 276 of 2,306 recommendations) remained prominent in the climate adaptation literature. Common concepts include protected areas, invasive species, ecosystem services, adaptive management, stepping stones, assisted migration, and conservation easements. In contrast, only 1% of recommendations focused on reproduction ( n = 26), survival ( n = 14), disease ( n = 26), or human-wildlife conflict ( n = 24). Few recommendations reflected the potential for local-scale management interventions. We demonstrate limited advancement in preparing natural resource managers in climate adaptation at local, management-relevant scales. Additional research is needed to identify and evaluate climate adaptation strategies aimed at reducing the vulnerability of wildlife to contemporary climate change. © 2020 The Wildlife Society.

Journal of Wildlife Management↗

USGS2009

Temporal latitudinal-gradient dynamics and tropical instability of deep-sea species diversity

A benthic microfaunal record from the equatorial Atlantic Ocean over the past four glacial-interglacial cycles was investigated to understand temporal dynamics of deep-sea latitudinal species diversity gradients (LSDGs). The results demonstrate unexpected instability and high amplitude fluctuations of species diversity in the tropical deep ocean that are correlated with orbital-scale oscillations in global climate: Species diversity is low during glacial and high during interglacial periods. This implies that climate severely influences deep-sea diversity, even at tropical latitudes, and that deep-sea LSDGs, while generally present for the last 36 million years, were weakened or absent during glacial periods. Temporally dynamic LSDGs and unstable tropical diversity require reconsideration of current ecological hypotheses about the generation and maintenance of biodiversity as they apply to the deep sea, and underscore the potential vulnerability and conservation importance of tropical deep-sea ecosystems.

Proceedings of the National Academy of Sciences of↗

USGS2018

Stream permanence is related to crayfish occupancy and abundance in the Ozark Highlands, USA

Crayfish use of intermittent streams is especially important to understand in the face of global climate change. We examined the influence of stream permanence and local habitat on crayfish occupancy and species densities in the Ozark Highlands, USA. We sampled in June and July 2014 and 2015. We used a quantitative kick–seine method to sample crayfish presence and abundance at 20 stream sites with 32 surveys/site in the Upper White River drainage, and we measured associated local environmental variables each year. We modeled site occupancy and detection probabilities with the software PRESENCE, and we used multiple linear regressions to identify relationships between crayfish species densities and environmental variables. Occupancy of all crayfish species was related to stream permanence. Faxonius meeki was found exclusively in intermittent streams, whereas Faxonius neglectus and Faxonius luteus had higher occupancy and detection probability in permanent than in intermittent streams, and Faxonius williamsi was associated with intermittent streams. Estimates of detection probability ranged from 0.56 to 1, which is high relative to values found by other investigators. With the exception of F. williamsi , species densities were largely related to stream permanence rather than local habitat. Species densities did not differ by year, but total crayfish densities were significantly lower in 2015 than 2014. Increased precipitation and discharge in 2015 probably led to the lower crayfish densities observed during this year. Our study demonstrates that crayfish distribution and abundance is strongly influenced by stream permanence. Some species, including those of conservation concern (i.e., F. williamsi , F. meeki ), appear dependent on intermittent streams, and conservation efforts should include consideration of intermittent streams as an important component of freshwater biodiversity.

Arkansas, Missouri↗

USGS2021

Occurrence, resource use, and demography of the common raven in North America: A research synthesis

We reviewed the scientific literature to inventory existing studies of common raven ( Corvus corax ; raven) ecology in western North America. We conducted an intial literature review between June 2015 and March 2018. Prior to completing our review, we revisited the published literature for any additional relevant studies in July 2021. Our goal was to identify knowledge gaps and to synthesize the current understanding of environmental features that may support raven populations that pose general threats to biodiversity and sensitive species in particular. We focused our review on studies with direct conservation applications related to 3 processes of raven ecology: occurrence, resource use, and demography. We identified covariates that researchers associated with these processes of raven ecology, and we also quantified the geographic distribution of studies. Our review identified 54 studies, with an increasing number of studies published per decade and a geographic bias characterized by more studies conducted in the Mojave and Columbia Plateau ecoregions than elsewhere. Most studies (44) reported on a single ecological process, but 10 studies reported on multiple ecological processes. Results related to raven occurrence appeared 31 times; demographic results appeared 21 times; and resource use was reported 17 times. We also identified 13 explanatory covariates regularly invoked to explain variation in raven ecological processes. Greater attention was given to covariates including vegetation land cover, human settlement, recreation, and linear rights-of-ways than were used to explain variation in ecological processes. Most demographic studies investigated raven reproduction exclusively, but a small number of studies considered raven survival exclusively or in combination with reproduction. Along with a detailed summary of individual studies provided as an appendix, we intend for our findings to serve as a reference and to help identify future research priorities.

Human–Wildlife Interactions↗

USGS2026

Quantifying avian resilience to habitat change to support conservation decision-making

Habitat loss and degradation are two of the main drivers of contemporary avian population declines. Wildlife managers are increasingly advocating for tools that provide decision support to set priorities for restoration or conservation efficiently. We demonstrate how to derive two species-specific management and resilience metrics: the greatest management impact point (GMIP) and the ecological resilience threshold (RT). The GMIP indicates the amount of environmental change in a landscape where habitat improvements are expected to have the greatest impact on species’ occurrence. The RT represents the amount of environmental change in a landscape that a species can tolerate before the steepest change in occupancy is expected to begin. We estimate species-specific metrics using the amount of uncharacteristic exotic vegetation as an index of environmental change, and demonstrate how multispecies patterns may suggest potential management strategies. We estimated occupancy models using 5 years of multispecies avian detection data from the Integrated Monitoring in Bird Conservation Regions program in the State of Utah, USA (hereafter, Utah). Based on the estimated relationship between species’ occupancy and amounts of uncharacteristic exotic vegetation, we derive RT and GMIP scores for 61 species breeding in Utah. We found wide interspecific variation in resilience to amounts of exotic vegetation, with species generally clustering at extreme values. Our results demonstrate that birds in Utah appear more resilient to amounts of uncharacteristic exotic vegetation at coarser spatial resolution, showing greater variance and lower average RTs at finer spatial resolution. Species that are not fully resilient to the range of uncharacteristic exotic vegetation observed in this study are expected to respond most strongly, on average, to management actions in landscapes with high levels of exotic vegetation; however, early detection and rapid response is likely the most effective strategy. Quantified across many species, these metrics can be used to identify and prioritize landscapes where current environmental conditions could be maintained to avoid the greatest species’ declines, or which maximize expected biodiversity returns on investment in environmental restoration. Managers can consider either focal species’ resilience for tailored conservation planning or summarize species resilience to create efficient management plans that maximize outcomes for multiple species.

Utah↗

USGS2005

Establishing an analytical framework for calculating consistent and sensitive measures of the rate of biodiversity change

The Convention on Biological Diversity’s (CBD) VIth Conference of the Parties (COP) and the World Summit on Sustainable Development agreed to a target to achieve a significant reduction of the rate of biodiversity loss by 2010. The VIIth COP adopted a conceptual framework to facilitate the assessment of global progress toward 2010 and to encourage national and regional targets and indicators. However, most of the indicators identified are not and will not be adequately quantified at desired accuracy and with desired frequency by 2010. What is possible is the establishment of an analytic framework that can provide guidelines and baselines for biodiversity estimates that can steadily improve with time. A judicious combination of remotely sensed data, Geographic Information System data, ground samples, and expert knowledge of species trends and species’ use of habitats form a solid basis for assessing biodiversity. National development of sensitive, consistent, and affordable indicators that can contribute to the CBD global indicators requires access to a baseline set of global ecosystem, climate, topography, land cover, and human impact information. Fortunately, over the last ten years, a number of relevant information sources have become available. Such information, as well as appropriate methods for use, should be promoted and made highly accessible to countries and organizations that support the CBD. The NASA-Non-Governmental Organization (NGO) Conservation Working Group is collaborating to evaluate and demonstrate the meaningful role remote sensing can play in developing biodiversity indicators to meet the targets specified. The Working Group members are evaluating indicators across a range of biomes and scales. The results are being synthesized in a handbook describing the use of remote sensing for monitoring the 2010 target to be published in 2006.

Conference Paper↗

USGS2023

Mammalian resistance to megafire in western U.S. woodland savannas

Increasingly frequent megafires are dramatically altering landscapes and critical habitats around the world. Across the western United States, megafires have become an almost annual occurrence, but the implication of these fires for the conservation of native wildlife remains relatively unknown. Woodland savannas are among the world's most biodiverse ecosystems and provide important food and structural resources to a variety of wildlife, but they are threatened by megafires. Despite this, the great majority of fire impact studies have only been conducted in coniferous forests. Understanding the resistance and resilience of wildlife assemblages following these extreme perturbations can help inform future management interventions that limit biodiversity loss due to megafire. We assessed the resistance of a woodland savanna mammal community to the short-term impacts of megafire using camera trap data collected before, during, and after the fire. Specifically, we utilized a 5-year camera trap data set (2016–2020) from the Hopland Research and Extension Center to examine the impacts of the 2018 Mendocino Complex Fire, California's largest recorded wildfire at the time, on the distributions of eight observed mammal species. We used a multispecies occupancy model to quantify the effects of megafire on species' space use, to assess the impact on species size and diet groups, and to create robust estimates of fire's impacts on species diversity across space and time. Megafire had a negative effect on the detection of certain mammal species, but overall, most species showed high resistance to the disturbance and returned to detection and site use levels comparable to unburned sites by the end of the study period. Following megafire, species richness was higher in burned areas that retained higher canopy cover relative to unburned and burned sites with low canopy cover. Fire management that prevents large-scale canopy loss is critical to providing refugia for vulnerable species immediately following fire in oak woodlands, and likely other mixed-forest landscapes.

California↗

USGS2013

Beaver dams maintain fish biodiversity by increasing habitat heterogeneity throughout a low-gradient stream network

Understanding the relationship between heterogeneity and biodiversity is an active focus of ecological research. Although habitat heterogeneity is conceptually linked to biodiversity, the amount and configuration of heterogeneity that maintains biodiversity within ecosystems is not well understood, especially for an entire stream network. Here, we tested alternative outcomes about how habitat alterations caused by beaver dams affected native fish biodiversity. Specifically, we quantified in-stream habitat and fish assemblages above and below all beaver dams ( n = 15) and selected control sites ( n = 9), adjacent to beaver dams, within an entire, low-gradient stream network (Fish Brook, MA, U.S.A.). Beaver dams altered habitat within streams in four ways based on upstream versus downstream differences in stream width, depth, velocity and substratum. In general, habitat heterogeneity, measured using two indices, was greater at beaver dams than control sites. The diversity and abundance of fish around beaver dams were positively related to habitat heterogeneity. Faster water and the coarser substratum below beaver dams increased the amount of fluvial habitat available to native fish. This alteration can be critical for fish with life histories that depend on flowing water and hard substrata. In summary, within a stream network, beaver dams maintained fish biodiversity by altering in-stream habitat and increasing habitat heterogeneity. Understanding the relationship between habitat heterogeneity and biodiversity can advance basic freshwater ecology and provide science-based support for applied aquatic conservation

Massachusetts↗

USGS2016

Positive biodiversity-productivity relationship predominant in global forests

The relationship between biodiversity and ecosystem productivity has been explored in detail in herbaceous vegetation, but patterns in forests are far less well understood. Liang et al. have amassed a global forest data set from >770,000 sample plots in 44 countries. A positive and consistent relationship can be discerned between tree diversity and ecosystem productivity at landscape, country, and ecoregion scales. On average, a 10% loss in biodiversity leads to a 3% loss in productivity. This means that the economic value of maintaining biodiversity for the sake of global forest productivity is more than fivefold greater than global conservation costs.

Science↗

USGS2023

People need freshwater biodiversity: Nine reasons freshwater biodiversity is important for humans

Freshwater biodiversity, from fish to frogs and microbes to macrophytes, provides a vast array of services to people. These services are under a growing threat as human-related pressure threatens freshwater biodiversity on multiple fronts. Here, Abigail Lynch and colleagues discuss nine fundamental ecosystem services that freshwater biodiversity provide to people. Given the importance of freshwater biodiversity to our very existence, they make a plea for a redoubled effort to better conserve this precious resource.

Global Water Forum↗

USGS1995

Southeastern freshwater fishes

North America has the richest fauna of temperate freshwater fishes in the world, with about 800 native species in the waters of Canada and the United States. The center of this diversity is in the southeastern United States, where as many as 500 species may exist (62% of the continental fauna north of Mexico). Many coastal marine species also enter fresh waters of the Southeast, and at least 34 foreign fish species are established in the region. Although freshwater fishes of the United States are better studied than any fish fauna of comparable scope in the world (Lee et al. 1980; Hocutt and Wiley 1986; Matthews and Heins 1987; Page and Burr 1991; Mayden 1992), large gaps exist in scientific knowledge about the biology and ecology of most species. New species are still being discovered, and the taxonomy of other species is being refined. Seriously declining populations of freshwater fishes in the United States concern the scientific community (Deacon et al. 1979; Williams et al. 1989; Moyle and Leidy 1992; Warren and Burr 1994). This article briefly summarizes the current conservation status of southeastern freshwater fishes; the Southeast is emphasized because of its important fish biodiversity and to focus attention on the growing problem of adverse human impacts on the region's aquatic habitats (Mount 1986; Burkhead and Jenkins 1991; Etnier and Starnes 1991; Warren and Burr 1994).

Book chapter↗

USGS2017

It is the time for oceanic seabirds: Tracking year-round distribution of gadfly petrels across the Atlantic Ocean

Aim Anthropogenic activities alter and constrain the structure of marine ecosystems with implications for wide-ranging marine vertebrates. In spite of the environmental importance of vast oceanic ecosystems, most conservation efforts mainly focus on neritic areas. To identify relevant oceanic areas for conservation, we assessed the year-round spatial distribution and spatio-temporal overlap of eight truly oceanic seabird species of gadfly petrels ( Pterodroma spp.) inhabiting the Atlantic Ocean. Location Atlantic Ocean. Methods Using tracking data (mostly from geolocators), we examined year-round distributions, the timing of life-cycle events, and marine habitat overlap of eight gadfly petrel species that breed in the Atlantic Ocean. Results We compiled 125 year-round tracks. Movement strategies ranged from non-migratory to long-distance migrant species and from species sharing a common non-breeding area to species dispersing among multiple non-breeding sites. Gadfly petrels occurred throughout the Atlantic Ocean but tended to concentrate in subtropical regions. During the boreal summer, up to three species overlapped spatio-temporally over a large area around the Azores archipelago. During the austral summer, up to four species coincided in a core area in subtropical waters around Cape Verde, and three species shared habitat over two distinct areas off Brazil. The petrels used many national Exclusive Economic Zones, although they also exploited offshore international waters. Main conclusions Tracking movements of highly mobile vertebrates such as gadfly petrels can provide a powerful tool to evaluate and assess the potential need for and location of protected oceanic areas. As more multispecies, year-round data sets are collected from wide-ranging vertebrates, researchers and managers will have greater insight into the location of biodiversity hotspots. These can subsequently inform and guide marine spatial planning efforts that account for both conservation and sustainable use of resources such as commercial fisheries.

Diversity and Distributions↗

USGS2022

Using predictions from multiple anthropogenic threats to estimate future population persistence of an imperiled species

Imperiled species face numerous and diverse anthropogenic threats to their persistence, and wildlife managers charged with making conservation decisions benefit from a sound understanding of how populations, species, and ecosystems will respond to future changes in threats to biodiversity. In southeastern North America, the gopher tortoise ( Gopherus polyphemus ) is a keystone species in upland ecosystems; however, tortoise populations have declined strongly over the last century, and the species is a candidate for increased protection by the United States federal government under the Endangered Species Act (ESA). Here, we sought to support conservation decision making for G. polyphemus by developing a spatially-explicit predictive population model that linked four anthropogenic threats (climate warming, sea-level rise, urbanization, habitat degradation) to demographic vital rates and used the model to estimate future changes in the number of individuals, populations, and metapopulations across the species’ range. Using recent survey data, we projected 457 populations for 80 years into the future under scenarios varying in threat magnitude, management magnitude, and demographic uncertainty. Population projections predicted that the number of individuals, populations, and metapopulations would decline among all simulated scenarios in the next 80 years. Model predictions were more sensitive to variation in adult survival and immigration rates than to variation in threat magnitude. A scenario with decreased habitat management and threat effects from climate warming, sea-level rise, and urbanization predicted geographic variation in persistence probabilities for populations that might result in decreased genetic representation across the species' range. Our results can be used to support conservation listing decisions for the gopher tortoise as part of its federal Species Status Assessment and provide an analytical framework for how to link diverse threats to geographically-varying demographic rates during population viability analyses for wide-ranging imperiled species around the world.

Global Ecology and Conservation↗

USGS2021

Reptile and amphibian diversity and abundance in an urban landscape: Impacts of fragmentation and the conservation value of small patches

Urbanization is a major contributor to habitat loss and fragmentation and is considered a global threat to biodiversity. We studied reptile and amphibian species diversity and abundance in a highly fragmented landscape adjacent to the second largest metropolitan area in the United States. Habitat patches in our study area were made up of remnant native vegetation surrounded by roads, housing, and other urban development. Species richness and diversity were positively associated with patch size, but patch age was not significantly associated with community characteristics. Four relatively common species were not detected in the small patches, indicating the possibility they had been extirpated by the time monitoring began, and six rarer species were not detected or detected only once in these patches. Although the patch size effect on species diversity was strong, we found that several of the small habitat patches had similar diversity to large patches, indicating potential value of these small habitat patches in protecting species as “microreserves.” In addition, one lizard species was found to be significantly more abundant in the smaller patches. To determine if abundance changed over time, we compared capture rates for four common lizards at the same sites ten years later. For three of the four species, abundance decreased over that period, specifically in the small patches. Although our long-term monitoring has confirmed that the full suite of herpetofauna is currently preserved in the study area overall, declines even in the common species over time hint at the potential severity of the threat of urbanization to rare species.

California↗