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A review of pathogens, diseases, and contaminants of muskrats (Ondatra zibethicus) in North America

Over the last 50 years, significant muskrat (Ondatra zibethicus) harvest declines have been observed throughout North America. Several theories for the decline have been proposed, including increased parasite infections and disease within muskrat populations. No existing wholistic review of muskrat exposure to pathogens, contaminants, and diseases exists. To address this knowledge gap, we conducted a thorough review of existing literature on muskrat pathogens, contaminants, and diseases across their natural range. This review is comprised of 129 articles from 1915-2019and from 27 U.S. states and 9 Canadian provinces. A wide diversity of contaminants, toxins, and pathogens were reported in muskrats, with the most common diseases being cysticercosis, tularemia, Tyzzer’s disease, and biotoxin poisoning from cyanobacteria. This review provides a summary of muskrat pathogens, contaminants, and disease over a century that has observed significant population declines throughout the species’ range in North America. Such data provides baseline data for understanding the potential role of disease in these declines. In addition, these data highlight critical knowledge gaps that warrant future research efforts.

Alaska, Alberta, British Columbia, Colorado, Idaho↗

Arsenic in ground water of the Willamette Basin, Oregon

In response to increasing demands on ground-water resources in the Willamette Basin, Oregon (fig. 1), the Oregon Water Resources Department (OWRD) and the U.S. Geological Survey (USGS) began a cooperative study of the basin’s ground-water resources in 1996. This study was designed to increase the current understanding of the ground-water resource, and to better characterize the distribution of naturally occurring poor quality ground water in the basin. Essential components of the study of the physical ground-water resource are the development of a quantitative understanding of regional ground-water availability and flow, and of ground-water/surface-water interactions. Of paramount interest in the characterization of naturally occurring poor-quality ground water in the Willamette Basin is the distribution of arsenic in ground water, the subject of this report. Arsenic contaminates many regional aquifer systems worldwide (Cantor, 1996; Thornton, 1996), and arsenic commonly is detected in ground water of the Willamette Basin at concentrations exceeding the U.S. Environmental Protection Agency (USEPA) current drinking water Maximum Contaminant Level (MCL) of 50 µg/L (micrograms per liter) (U.S. Environmental Protection Agency, 1996). Arsenic is associated with a number of adverse effects on human health. The USEPA considers arsenic to be a human carcinogen (U.S. Environmental Protection Agency, 1996). Examples of other adverse health effects attributed to consumption of arsenic range from weakness and abdominal pain to neurological and cardiovascular problems. A review of health effects associated with consumption of arsenic is given in a report by World Health Organization (1996).

Oregon↗

Terrain analysis of the lunar equatorial belt

The U. S. Geological Survey began, in November 1963, a terrain analysis of the lunar equatorial belt (10°N-10°S, 60° W15°E), on behalf of the National Aeronautics and Space Administration. The purpose of the study is to establish a quantitative classification system in terms of different degrees of relative resolvable roughness, using the best available earth based techniques, the resolution of which averages one kilometer. Those parts of the lunar surface that have the least resolvable roughness at this scale have the highest statistical probability of containing safe landing areas at the one to ten meter scale for both manned and unmanned spacecraft. This preliminary report is based on eight months work prior to July 1, 1964: an unreviewed manuscript was submitted initially to the National Aeronautics and Space Administration on July 27, 1964. The report does not include any data derived from Ranger VII, and manuscript review subsequent to Ranger VII has not revealed the need for any significant changes in the conclusions. The major results are: 1) a quantitative terrain classification of the equatorial belt, chiefly in the form of a map (Plate 1), but including slope frequency distribution curves for each unit; 2) four larger scale maps (1:1, 000, 000) of the central part of the belt showing the areal distribution pattern of approximately 30, 000 individual slope measurements; 3) a large scale terrain map of the Flamsteed area, studied visually at the Lick 36" refractor, to determine the relative surface roughness below the limit of photographic resolution: 4) a full discussion of all the major techniques employed in the study, i.e. photometric slope measurement, slope measurement by shadow variation high resolution photography, and visual study techniques; 5) an extrapolation of derived roughness information below the of photographic resolution. The extrapolation is based primarily on the behavior of the lunar slope data through a wide range of resolution and on information derived from studies of different terrestrial areas at varying degrees of resolution.

Open-File Report↗

Summary of the analyses for recovery factors

Introduction In order to determine the hydrocarbon potential of oil reservoirs within the U.S. sedimentary basins for which the carbon dioxide enhanced oil recovery (CO 2- EOR) process has been considered suitable, the CO 2 Prophet model was chosen by the U.S. Geological Survey (USGS) to be the primary source for estimating recovery-factor values for individual reservoirs. The choice was made because of the model’s reliability and the ease with which it can be used to assess a large number of reservoirs. The other two approaches—the empirical decline curve analysis (DCA) method and a review of published literature on CO 2 -EOR projects—were deployed to verify the results of the CO 2 Prophet model. This chapter discusses the results from CO 2 Prophet (chapter B, by Emil D. Attanasi, this report) and compares them with results from decline curve analysis (chapter C, by Hossein Jahediesfanjani) and those reported in the literature for selected reservoirs with adequate data for analyses (chapter D, by Ricardo A. Olea). To estimate the technically recoverable hydrocarbon potential for oil reservoirs where CO 2 -EOR has been applied, two of the three approaches—CO 2 Prophet modeling and DCA—do not include analysis of economic factors, while the third approach—review of published literature—implicitly includes economics. For selected reservoirs, DCA has provided estimates of the technically recoverable hydrocarbon volumes, which, in combination with calculated amounts of original oil in place (OOIP), helped establish incremental CO 2 -EOR recovery factors for individual reservoirs. The review of published technical papers and reports has provided substantial information on recovery factors for 70 CO 2 -EOR projects that are either commercially profitable or classified as pilot tests. When comparing the results, it is important to bear in mind the differences and limitations of these three approaches.

Scientific Investigations Report↗

Status of the Sierra Nevada: the Sierra Nevada Ecosystem Project

The Sierra Nevada ecosystem project was requested by Congress in the Conference Report for Interior and related Agencies 1993 Appropriation Act, which authorized funds for a scientific review of the remaining old growth in the national forests of the Sierra Nevada in California, and for a study of the entire Sierra Nevada ecosystem by an independent panel of scientists, with expertise in diverse areas related to this issue. This CD-ROM is a digital version of the set of reports titled 'Sierra Nevada Ecosystem Project, final report to Congress' published in paper form by the Centers for Water and Wildland Resources of the University of California, Davis.

Data Series↗

Basic Requirements for Collecting, Documenting, and Reporting Precipitation and Stormwater-Flow Measurements

Accurate and representative precipitation and stormwater-flow data are crucial for use of highway- or urban-runoff study results, either individually or in a regional or national synthesis of stormwater-runoff data. Equally important is information on the level of accuracy and representativeness of this precipitation and stormwaterflow data. Accurate and representative measurements of precipitation and stormwater flow, however, are difficult to obtain because of the rapidly changing spatial and temporal distribution of precipitation and flows during a storm. Many hydrologic and hydraulic factors must be considered in performing the following: selecting sites for measuring precipitation and stormwater flow that will provide data that adequately meet the objectives and goals of the study, determining frequencies and durations of data collection to fully characterize the storm and the rapidly changing stormwater flows, and selecting methods that will yield accurate data over the full range of both rainfall intensities and stormwater flows. To ensure that the accuracy and representativeness of precipitation and stormwater-flow data can be evaluated, decisions as to (1) where in the drainage system precipitation and stormwater flows are measured, (2) how frequently precipitation and stormwater flows are measured, (3) what methods are used to measure precipitation and stormwater flows, and (4) on what basis are these decisions made, must all be documented and communicated in an accessible format, such as a project description report, a data report or an appendix to a technical report, and (or) archived in a State or national records center. A quality assurance/quality control program must be established to ensure that this information is documented and reported, and that decisions made in the design phase of a study are continually reviewed, internally and externally, throughout the study. Without the supporting data needed to evaluate the accuracy and representativeness of the precipitation and stormwater-flow measurements, the data collected and interpretations made may have little meaning.

Open-File Report↗

Habitat Suitability Index Models: Field sparrow

Habitat preferences of the field sparrow (Spizella pusilla) are described in this report, which is one of a series of Habitat Suitability Index (HSI) models. A review and synthesis of the literature is followed by the development of a habitat model for the field sparrow throughout its breeding range in the United States. HSI models are designed to be used in conjunction with Habitat Evaluation Procedures previously developed by the U.S. Fish and Wildlife Service.

FWS/OBS↗

Olympic Fisher Reintroduction Project: Progress report 2008-2011

This progress report summarizes the final year of activities of Phase I of the Olympic fisher restoration project. The intent of the Olympic fisher reintroduction project is to reestablish a self-sustaining population of fishers on the Olympic Peninsula. To achieve this goal, the Olympic fisher reintroduction project released 90 fishers within Olympic National Park from 2008 to 2010. The reintroduction of fishers to the Olympic Peninsula was designed as an adaptive management project, including the monitoring of released fishers as a means to (1) evaluate reintroduction success, (2) investigate key biological and ecological traits of fishers, and (3) inform future reintroduction, monitoring, and research efforts. This report summarizes reintroduction activities and preliminary research and monitoring results completed through December 2011. The report is non-interpretational in nature. Although we report the status of movement, survival, and home range components of the research, we have not completed final analyses and interpretation of research results. Much of the data collected during the monitoring and research project will be analyzed and interpreted in the doctoral dissertation being developed by Jeff Lewis; the completion of this dissertation is anticipated prior to April 2013. We anticipate that this work, and analyses of other data collected during the project, will result in several peer-reviewed scientific publications in ecological and conservation journals, which collectively will comprise the final reporting of work summarized here. These publications will include papers addressing post-release movements, survival, resource selection, food habits, and age determination of fishers.

Report↗

Aquatic organism passage at road-stream crossings—synthesis and guidelines for effectiveness monitoring

Restoration and maintenance of passage for aquatic organisms at road-stream crossings represents a major management priority, involving an investment of hundreds of millions of dollars (for example, U.S. Government Accounting Office, 2001). In recent years, passage at hundreds of crossings has been restored, primarily by replacing barrier road culverts with bridges or stream simulation culverts designed to pass all species and all life stages of aquatic life and simulate natural hydro-geomorphic processes (U.S. Forest Service, 2008). The current situation has motivated two general questions: 1. Are current design standards for stream simulation culverts adequately re-establishing passage for aquatic biota? and 2. How do we monitor and evaluate effectiveness of passage restoration? To address the latter question, a national workshop was held in March 2010, in Portland, Oregon. The workshop included experts on aquatic organism passage from across the nation (see table of participants, APPENDIX) who addressed four classes of methods for monitoring effectiveness of aquatic organism passage—individual movement, occupancy, demography, and genetics. This report has been written, in part, for field biologists who will be undertaking and evaluating the effectiveness of aquatic organism passage restoration projects at road-stream crossings. The report outlines basic methods for evaluating road-stream crossing passage impairment and restoration and discusses under what circumstances and conditions each method will be useful; what questions each method can potentially answer; how to design and implement an evaluation study; and points out the fundamental reality that most evaluation projects will require special funding and partnerships among researchers and resource managers. The report is organized into the following sections, which can be read independently: 1. Historical context: In this section, we provide a brief history of events leading up to the present situation involving aquatic organism passage as a useful context for the issues covered herein. 2. Importance of connectivity for aquatic organisms: In this section, we provide background information regarding the movement characteristics of aquatic organisms and their vulnerability to passage impairment, and the importance of connectivity for a broad diversity of aquatic vertebrates and invertebrates. This section should be useful for practitioners in selecting what species to monitor in relation to aquatic organism passage. 3. Methods for evaluating aquatic organism passage: In this section, we present a range of perspectives on alternatives for assessing and monitoring aquatic organism passage impairment and the effectiveness of passage restoration actions, including the following methods: Individual Movement, Occupancy Models, Abundance (Demography), and Molecular Genetic Markers. 4. Relevance, strengths, and limitations of the four methods: In this section, we discuss the utility of each of the methods as a tool for assessing and quantifying passage impairment and restoration effectiveness. 5. Guidelines for selecting a method: In this section, we review some fundamental criteria and guidelines to consider when selecting a method for monitoring in the context of answering three important questions that should be addressed when developing a plan for evaluating aquatic organism passage. 6. Study and monitoring design considerations: In this section, we discuss four key design elements that need to be considered when developing a monitoring design for assessing passage impairment and restoration. The basic objectives of the report are to: 1. Review the movement characteristics of five groups of aquatic organisms that inhabit streams and to assess their general vulnerability to passage impairment at road-stream crossings; 2. Review four methods for monitoring aquatic organism passage impairment and the effectiveness of actions to restore passage at road-stream crossing structures; 3. Assess the relevance, strengths, and limitations of each method as a monitoring tool; 4. Identify and discuss guidelines that will be useful for selecting a monitoring method; and 5. Discuss what we have identified as the four key elements that need to be considered when developing a monitoring design for assessing passage impairment and restoration at road-stream crossings.

Open-File Report↗

A comparison of three federal datasets for thermoelectric water withdrawals in the United States for 2010

Historically, thermoelectric water withdrawal has been estimated by the Energy Information Administration (EIA) and the U.S. Geological Survey's (USGS) water-use compilations. Recently, the USGS developed models for estimating withdrawal at thermoelectric plants to provide estimates independent from plant operator-reported withdrawal data. This article compares three federal datasets of thermoelectric withdrawals for the United States in 2010: one based on the USGS water-use compilation, another based on EIA data, and the third based on USGS model-estimated data. The withdrawal data varied widely. Many plants had three different withdrawal values, and for approximately 54% of the plants the largest withdrawal value was twice the smallest, or larger. The causes of discrepancies among withdrawal estimates included definitional differences, definitional noise, and various nondefinitional causes. The uncertainty in national totals can be characterized by the range among the three datasets, from 5,640 m 3 /s (129 billion gallons per day [bgd]) to 6,954 m 3 /s (158 bgd), or by the aggregate difference between the smallest and largest values at each plant, from 4,014 m 3 /s (92 bgd) to 8,590 m 3 /s (196 bgd). When used to assess the accuracy of reported values, the USGS model estimates identify plants that need to be reviewed.

Journal of the American Water Resources Associatio↗

Data-collection methods, quality-assurance data, and site considerations for total dissolved gas monitoring, lower Columbia River, Oregon and Washington, 2000

Excessive total dissolved gas pressure can cause gas-bubble trauma in fish downstream from dams on the Columbia River. In cooperation with the U.S. Army Corps of Engineers, the U.S. Geological Survey collected data on total dissolved gas pressure, barometric pressure, water temperature, and probe depth at eight stations on the lower Columbia River from the John Day forebay (river mile 215.6) to Camas (river mile 121.7) in water year 2000 (October 1, 1999, to September 30, 2000). These data are in the databases of the U.S. Geological Survey and the U.S. Army Corps of Engineers. Methods of data collection, review, and processing, and quality-assurance data are presented in this report.

Oregon, Washington↗

Monitoring pesticides in wildlife

Early in the development of the wildlife monitoring program, certain criteria were recognized as being important in the selection of species of wild animals suitable for pesticide monitoring purposes. Ideally, the forms selected should be geographically well distributed, and they should be reasonably abundant and readily available for sampling. In addition, animals occurring near the top of food chains have the capacity to reflect residues in organisms occurring at lower levels in the same food chains. Based on these criteria, species chosen for monitoring include the starling (Sturnus vulgaris), mallard (Anas platyrhynchos) and black ducks (Anas rubripes), and the bald eagle (Haliaeetus leucocephalus). The black duck is substituted for the mallard in States where suitable numbers of mallards cannot be obtained. The Bureau of Sport Fisheries and Wildlife is held responsible for the execution of the wildlife portion of the National Pesticide Monitoring Program. The primary objective is to ascertain on a nationwide basis and independent of specific treatments the levels and trends of certain pesticidal chemicals and other pollutants in the bodies of selected forms of wildlife. The program was first described by Johnson et al. (4) in 1967. The purpose of this report is to update and redescribe the wildlife monitoring program and briefly review accomplishments.

Pesticides Monitoring Journal↗