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Clustering and unconstrained ordination with Dirichlet process mixture models

Assessment of similarity in species composition or abundance across sampled locations is a common goal in multi-species monitoring programs. Existing ordination techniques provide a framework for clustering sample locations based on species composition by projecting high-dimensional community data into a low-dimensional, latent ecological gradient representing species composition. However, these techniques require specification of the number of distinct ecological communities present in the latent space, which can be difficult to determine in advance. We develop an ordination model capable of simultaneous clustering and ordination that allows for estimation of the number of clusters present in the latent ecological gradient. This model draws latent coordinates for each sample location from a Dirichlet process mixture model, affording researchers with probabilistic statements about the number of clusters present in the latent ecological gradient. The model is compared to existing methods for simultaneous clustering and ordination via simulation and applied to two empirical datasets; JAGS code to fit the proposed model is provided in an appendix. The first dataset concerns presence-absence records of fish in the Doubs river in eastern France and the second dataset describes presence-absence records of plant species in Craters of the Moon National Monument and Preserve (CRMO) in Idaho, USA. Results from both analyses align with existing ecological gradients at each location. Development of the Dirichlet process ordination model provides wildlife managers with data-driven inferences about the number of distinct communities present across monitored locations, allowing for more cost-effective monitoring and reliable decision-making for conservation management.

Methods in Ecology and Evolution

Geomorphic change and vegetation development on the Muddy River Mudflow Deposit

Geomorphic disturbances are widely recognized as important processes that influence plant-community development and landscape-scale vegetation patterns [e.g., Veblen and Ashton (1978), Garwood et al. (1979), Swanson et al. (1988), and Malanson (1993)]. In volcanically active areas such as the Pacific Northwest, mudflows are locally important geomorphic disturbance events governing short- and long-term ecological conditions. Volcanic mudflows can scour and inundate river valleys with large volumes of debris (Janda et al. 1981; Pierson 1985; Vallance and Scott 1997; Scott 1988; Vallance 2000; Kovanen et al. 2001) and influence plant succession tens of kilometers downstream from their points of origin (Halpern and Harmon 1983; Adams and Dale 1987;Wood and del Moral 1987; Frenzen et al. 1988). In addition to altering plant succession, large volcanic mudflows can initiate a cascading chain of secondary disturbances that further modify the landscape and affect subsequent ecological responses (see Swanson and Major, Chapter 3, this volume).

Book chapter

Phragmites management in high water: Cutting plants under water limits biomass production, carbohydrate storage, and rhizome viability

Invasion of Phragmites australis (common reed) in wetlands throughout North America, and particularly the Laurentian Great Lakes Basin, poses significant ecological problems. The extended period of low Great Lakes water levels from 2000 to 2013 created conditions for large expansions of Phragmites in the Great Lakes coastal zone. The following extended period of high water in the Great Lakes during late 2010’s, culminating in record high lake levels in 2020 allowed managers to take advantage of high water by using a cut-to-drown management strategy (i.e., cutting plants below the water surface to stop the flow of atmospheric gases) to control Phragmites populations. To examine the efficacy of a cut-to-drown control strategy, we conducted a controlled-greenhouse study that tested the effect of submergence and timing of cutting (early or late in growing season) on Phragmites growth and viability post treatment. To evaluate Phragmites growth and viability, we measured belowground biomass, rhizome non-structural carbohydrate content (NSC), and rhizome viability following a cut-to-drown treatment. Applying a cut-to-drown treatment reduced average belowground biomass production up to 99%, limited rhizome NSC content up to 83%, and inhibited rhizome viability, regardless of timing of cutting treatments. These results suggest that under high-water conditions, utilizing a cut-to-drown strategy has potential for being a useful control mechanism for Phragmites . However, further research is needed to determine to what extent these results will lead to sustained reductions in growth and viability under field conditions, where rhizome belowground biomass and storage capacity are much larger.

Wetlands Ecology and Management

Rangeland health attributes and indicators for qualitative assessment

Panels of experts from the Society for Range Management and the National Research Council proposed that status of rangeland ecosystems could be ascertained by evaluating an ecological site's potential to conserve soil resources and by a series of indicators for ecosystem processes and site stability. Using these recommendations as a starting point, we developed a rapid, qualitative method for assessing a moment-in-time status of rangelands. Evaluators rate 17 indicators to assess 3 ecosystem attributes (soil and site stability, hydrologic function, and biotic integrity) for a given location. Indicators include rills, water flow patterns, pedestals and terracettes, bare ground, gullies, wind scour and depositional areas, litter movement, soil resistance to erosion, soil surface loss or degradation, plant composition relative to infiltration, soil compaction, plant functional/structural groups, plant mortality, litter amount, annual production, invasive plants, and reproductive capability. In this paper, we detail the development and evolution of the technique and introduce a modified ecological reference worksheet that documents the expected presence and amount of each indicator on the ecological site. In addition, we review the intended applications for this technique and clarify the differences between assessment and monitoring that lead us to recommend this technique be used for moment-in-time assessments and not be used for temporal monitoring of rangeland status. Lastly, we propose a mechanism for adapting and modifying this technique to reflect improvements in understanding of ecosystem processes. We support the need for quantitative measures for monitoring rangeland health and propose some measures that we believe may address some of the 17 indicators.

Journal of Range Management

Vascular Plant and Vertebrate Inventory of Gila Cliff Dwellings National Monument

Executive Summary This report summarizes the results of the first comprehensive biological inventory of Gila Cliff Dwellings National Monument (NM) in western New Mexico. This project was part of a larger effort to inventory plants and vertebrates in eight National Park Service units in Arizona and New Mexico. Our surveys address many of the objectives that were set forth in the monument's natural resource management plan almost 20 years ago, but until this effort, those goals were never accomplished. From 2001 to 2003 we surveyed for vascular plants and vertebrates (amphibians, reptiles, birds, and mammals) at Gila Cliff Dwellings NM to document presence of species within the boundaries of the monument. For all taxonomic groups that we studied, we collected 'incidental' sightings on U.S. Forest Service lands adjacent to the monument, and in a few cases we did formal surveys on those lands. Because we used repeatable study designs and standardized field techniques, these inventories can serve as the first step in a biological monitoring program for Gila Cliff Dwellings NM and surrounding lands. We recorded 552 species at Gila Cliff Dwellings NM and the surrounding lands (Table 1). We found no non-native species of reptiles, birds, or mammals, one non-native amphibian (American bullfrog), and 33 non-native plants. Particularly on lands adjacent to the monument we found that the American bullfrog was very abundant, which is a cause for significant management concern. Species of non-native plants that are of management concern include red brome, bufflegrass, and cheatgrass. For a park unit of its size and geographic location, we found the plant and vertebrate communities to be fairly diverse; for each taxonomic group we found representative species from a wide range of taxonomic orders and/or families. The monument's geographic location, with influences from the Rocky Mountain, Chihuahuan Desert, and Madrean ecological provinces, plays an important role in determining the species richness at the monument. Also important is the wide range of conditions at the site. The diversity of plants results from a wide variety of soil types and aspects (from the cool, moist Cliff Dweller Canyon to dry mesa slopes) and an abundance of water from the West Fork of the Gila River. In turn, the vertebrate communities respond to this diversity of vegetation, topography, and microsites. For example, for each taxonomic group we found species that were only associated with a single community type, most often the riparian areas along the West and Middle forks of the Gila River. We found cause for significant concern with regard to loss of species in the last few decades. One species of amphibian (Chiricahua leopard frog) is certainly extirpated from the area. Three other species of amphibians (Mexican spadefoot, Woodhouse's toad, and red-spotted toad), reported as being 'common' in the area in 1971, were not found during our surveys. In addition, we did not find three species of rodents that were found in 1965: silky pocket mouse, Ord's kangaroo rat, and southern grasshopper mouse. The monument's aquatic vertebrate component, in particular, may be at a critical juncture whereby other species, such as gartersnakes, may be poised for extirpation. Declining abundance of native fish species has been demonstrated from long-term monitoring of these communities along the Middle Fork of the Gila River. This report includes lists of species recorded by us or species likely to be recorded with additional survey effort. It also includes management implications from our work - how the monument staff might better maintain or enhance the unique biological resources of the monument. This study is the first step in a long-term process of compiling information on the biological resources of the monument and its surrounding areas. We recommend additional inventory and monitoring studies and identify components of our effort that could be improved upon

Open-File Report

Growth responses of five desert plants as influenced by biological soil crusts from a temperate desert, China

In almost all dryland systems, biological soil crusts (biocrusts) coexist alongside herbaceous and woody vegetation, creating landscape mosaics of vegetated and biocrusted patches. Results from past studies on the interaction between biocrusts and vascular plants have been contradictory. In the Gurbantunggut desert, a large temperate desert in northwestern China, well-developed lichen-dominated crusts dominate the areas at the base and between the sand dunes. We examined the influence of these lichen-dominated biocrusts on the germination, growth, biomass accumulation, and elemental content of five common plants in this desert: two shrubs ( Haloxylon persicum , Ephedra distachya ) and three herbaceous plants ( Ceratocarpus arenarius , Malcolmia africana and Lappula semiglabra ) under greenhouse conditions. The influence of biocrusts on seed germination was species-specific. Biocrusts did not affect percent germination in plants with smooth seeds, but inhibited germination of seeds with appendages that reduced or eliminated contact with the soil surface or prevented seeds from slipping into soil cracks. Once seeds had germinated, biocrusts had different influences on growth of shrub and herbaceous plants. The presence of biocrusts increased concentrations of nitrogen but did not affect phosphorus or potassium in tissue of all tested species, while the uptake of the other tested nutrients was species-specific. Our study showed that biocrusts can serve as a biological filter during seed germination and also can influence growth and elemental uptake. Therefore, they may be an important trigger for determining desert plant diversity and community composition in deserts.

Ecological Research

Distribution and winter survival health of Asian clams, Corbicula fluminea, in the St. Clair River, Michigan

We studied the distribution and winter survival of the Asian clam, Corbicula fluminea, in the St. Clair River from the fall of 1988 to the spring of 1990. Between fall of 1988 and spring of 1989, distribution of Corbicula was extended from 5.5 to 11.5 km downstream from an electric power plant. However, total abundance of clams decreased during the winter. By fall of 1989, Corbicula was found 14.5 km from the power plant, and the mean density of clams was 27 individuals/m 2 . Between fall of 1989 and spring of 1990, distribution was reduced to 7.5 km from the power plant and abundance decreased 97%. During the winter of 1988-1989, we collected clams monthly from one station 2.2 km from the power plant, and we observed that clams survived the harsh winter for two months after the water temperature dropped about 1.5&deg;C below the reported lethal level for Corbicula in midwinter. During the winer of 1989-1990, we held clams at the sediment-water interface in enclosures, and we observed that condition indices (dry body weight; dry shell weight) of clams remained stable (mean = 0.05 &plusmn; 0.01) in December and January and then declined significantly (p < 0.05) to 0.04 &plusmn; 0.01 in February. All clams perished by late March. The deteriorating physiological state of clams, as indicated by declining condition index, seemingly is a factor in late winter mortalities of Corbicula in the St. Clair River. In contrast to the rapid geographic spread and population increases in the southern United States, Corbicula likely will not spread rapidly throughout the Great Lakes beyond shoreline thermal refugia of heated-water discharge plumes from power plants.

Michigan

Intra-site sources of restoration variability in severely invaded rangeland: Strong temporal effects of herbicide-weather interactions; weak spatial effects of plant-community patch type and litter

Invasions by exotic annual grasses (EAGs) are replacing native perennials in semiarid areas globally, including the vast sagebrush-steppe rangelands of western North America. Efforts to eradicate EAGs and restore perennials have had mixed success, especially in relatively warm and dry areas where EAGs had high dominance prior to intervention. Greater consideration of the ecological sources of variability in EAG treatment outcomes may improve success. We hypothesized that herbicide and restoration outcomes would be influenced by restoration strategy (type of herbicide, seeding or planting, timing of treatment) and underlying spatial variability associated with plant community patch type and litter, all applied in a landscape-scale experiment in a severely invaded area in Southern Idaho, USA. EAGs, specifically medusahead ( Taeniatherum caput-medusae [L.] Nevski), were strongly reduced for up to 3 years (maximum observation period) by the pre-emergent herbicide indaziflam, whereas the pre/post-emergent imazapic reduced EAGs only when applied twice. Indaziflam effects were greater when post-spray moisture was greater, and also when co-applied with imazapic, but reapplying indaziflam did not lead to additional reduction of EAGs. Imazapic and indaziflam each stimulated species-specific, secondary invasion by exotic and/or invasive tall forbs. Application of the broadleaf herbicide aminopyralid provided only a fleeting 1 year of control of a dominant, highly noxious forb skeletonweed ( Chondrilla juncea L.). Underlying heterogeneity in plant community patch type (dominant herb species) explained only ∼5% of variation in the herbicide effects, and manipulation of litter prior to spraying had no effect. Several years of seedings and planting resulted in no establishment of native perennials. Herbicides, especially indaziflam, appear to be an effective tool for reducing EAGs for multiple years in the challenging restoration conditions we evaluated, particularly if their application coincides with suitable moisture. However, restoring the perennials required for longer term resistance to reinvasion is a serious challenge that could be avoided with preservation of perennials.

Idaho

Thermal ecology of subadult and adult muskellunge in a thermally enriched reservoir

The movement of adult muskellunge , Esox masquinongy Mitchill, has been investigated in a variety of systems, but temperature selection by muskellunge has not been examined where well-oxygenated waters were available over a range of temperatures for much of the year. Thirty subadult and adult muskellunge tagged internally with temperature-sensing radio tags were tracked from March 2010 to March 2011 in a Tennessee reservoir. Mean tag temperatures were 18.9 &deg;C in spring (March to May), 22.1 &deg;C in summer (June to August), 16.5 &deg;C in autumn and 9.8 &deg;C in winter (December to February). When the greatest range in water temperatures was available (7.1&ndash;33.3 &deg;C; May to early August 2010), their realised thermal niche (mean &plusmn; 1 SD) was 22.3 &deg;C &plusmn; 1.8; the realised thermal niche was affected by fish size (smaller fish selected slightly warmer temperatures) but not sex. An electric generating steam plant discharging warm water resumed operation in January 2011, and most (86%) tagged fish occupied the plume where temperatures were &asymp;10 &deg;C warmer than ambient water temperatures. No mortalities were observed 15 days later when plant operations ceased. Their affinity for the heated plume prompted concerns that muskellunge will be too easily exploited when the plant operates during winter.

Tennessee

Ecologically relevant moisture and temperature metrics for assessing dryland ecosystem dynamics

In drylands, water-limited regions that cover ~40% of the global land surface, ecosystems are primarily controlled by access to soil moisture and exposure to simultaneously hot and dry conditions. Quantifying ecologically relevant environmental metrics is difficult in drylands because the response of vegetation to moisture and temperature conditions is not easily explained solely by climate-based metrics. To address this knowledge gap, we developed and examined 27 climate and ecological drought metrics across dryland areas of the western U.S. Included in the 27 metrics is a suite of 19 largely new “ecological drought metrics” that are designed to quantify multiple aspects of environmental limitation in drylands, including overall growing conditions, seasonal fluctuations, seasonal moisture timing, exposure to extreme drought, and recruitment potential for perennial plants. To quantify these metrics, we simulated water balance pools and fluxes of daily soil moisture at multiple depths with historical weather from 1970-2010 using the SOILWAT2 ecosystem water balance model. We assessed the relationships among these metrics and their spatial and temporal patterns. We found that the inclusion of ecological drought metrics substantially increased the dimensionality of the climate metrics dataset; the number of independent variables needed to explain 90% of the variance in the dataset increased with the addition of ecological drought metrics. Spatial patterns in overall growing conditions represented well-known differences among ecoregions, for example high temperatures and low precipitation in the southwest and cool temperatures and greater precipitation in the northeast. Seasonal fluctuation in soil water availability (SWA) was greatest in the southwest (Mojave Desert) while fluctuation in climatic water deficit (CWD) was greatest in the northwest (northern Great Basin and Columbia Plateau). Seasonal timing of moisture also differed among metrics; the timing of wet degree days (WDD), SWA and CWD were only weakly related to seasonal timing of precipitation. Plant recruitment metrics varied strongly across western drylands. In the Great Plains, recruitment events occurred more frequently and lasted longer than in the intermountain regions, where recruitment events were comparatively rare and short. These ecological drought metrics provide new insight into patterns of soil moisture and temperature that shape the structure and function of dryland ecosystems. The metrics will be useful for assessing the potential impact of climate change on dryland ecosystems and developing adaptive resource management strategies to sustain dryland ecosystem services in a changing world.

Ecohydrology

Critter Tales—Adventures in restoration activity book for kids

Product Information “Critter Tales: Adventures in Restoration Activity Book” is an interactive educational resource designed for children ages 5–9, produced by the U.S. Geological Survey in cooperation with the U.S. Department of the Interior, Office of Restoration and Damage Assessment. Through the journey of Lulu the loon and a cast of animal friends, young readers explore the importance of ecological restoration across diverse habitats—from sand dunes and wetlands to prairies and streams. The activity book blends storytelling, science, and hands-on activities to teach children how restoration efforts help wildlife thrive. Readers learn about native plants, animal life cycles, and the role of restoration in protecting habitats for birds, turtles, butterflies, mussels, and more. Engaging puzzles, coloring pages, and interactive challenges encourage kids to become nature’s helpers, fostering environmental stewardship and awareness. With vibrant illustrations and accessible language, the publication highlights practical actions—such as planting native milkweed, using lead-free fishing tackle, and supporting mussel restoration—that empower children to make a positive change in their own communities. The book also introduces basic ecological concepts and celebrates the interconnectedness of living things, making it an ideal resource for families, educators, and anyone interested in environmental education.

General Information Product

Effects of topoclimatic complexity on the composition of woody plant communities

Topography can create substantial environmental variation at fine spatial scales. Shaped by slope, aspect, hill-position and elevation, topoclimate heterogeneity may increase ecological diversity, and act as a spatial buffer for vegetation responding to climate change. Strong links have been observed between climate heterogeneity and species diversity at broader scales, but the importance of topoclimate for woody vegetation across small spatial extents merits closer examination. We established woody vegetation monitoring plots in mixed evergreen-deciduous woodlands that spanned topoclimate gradients of a topographically heterogeneous landscape in northern California. We investigated the association between the structure of adult and regenerating size classes of woody vegetation and multidimensional topoclimate at a fine scale. We found a significant effect of topoclimate on both single-species distributions and community composition. Effects of topoclimate were evident in the regenerating size class for all dominant species (four Quercus spp. , Umbellularia californica and Pseudotsuga menziesii ) but only in two dominant species ( Quercus agrifolia and Quercus garryana ) for the adult size class. Adult abundance was correlated with water balance parameters (e.g. climatic water deficit) and recruit abundance was correlated with an interaction between the topoclimate parameters and conspecific adult abundance (likely reflecting local seed dispersal). However, in all cases, the topoclimate signal was weak. The magnitude of environmental variation across our study site may be small relative to the tolerance of long-lived woody species. Dispersal limitations, management practices and patchy disturbance regimes also may interact with topoclimate, weakening its influence on woody vegetation distributions. Our study supports the biological relevance of multidimensional topoclimate for mixed woodland communities, but highlights that this relationship might be mediated by interacting factors at local scales.

California

Context-dependent effects of livestock grazing in deserts of western North America

This chapter provides a general review of grazing disturbance by large mammalian grazers and the role of ecological context in moderating its effects, with emphasis on North American deserts. It discusses the ecological consequences of cessation of livestock grazing and present a case study from the Mojave Desert, United States of America. A primary effect of grazing is selective removal and ingestion of herbaceous plants, in contrast to removal of woody biomass from woody plants by browsing herbivores. The consequences of grazing–and resilience of a system to grazing disturbance–are highly context-dependent and vary across rangelands globally. Synergistic interactions between soil depth and plant structural properties, such as rooting depth and water-use efficiency, also influence plant access to water, and therefore moderate plant responses to drought and resilience to grazing. In some ecosystems, livestock grazing constitutes a novel or intensified disturbance. Application of the Intermediate Disturbance Hypothesis to grazing disturbance has been relatively infrequently tested relative to other ecological disturbances.

California, Nevada

Nationwide reconnaissance of contaminants of emerging concern in source and treated drinking waters of the United States

When chemical or microbial contaminants are assessed for potential effect or possible regulation in ambient and drinking waters, a critical first step is determining if the contaminants occur and if they are at concentrations that may cause human or ecological health concerns. To this end, source and treated drinking water samples from 29 drinking water treatment plants (DWTPs) were analyzed as part of a two-phase study to determine whether chemical and microbial constituents, many of which are considered contaminants of emerging concern, were detectable in the waters. Of the 84 chemicals monitored in the 9 Phase I DWTPs, 27 were detected at least once in the source water, and 21 were detected at least once in treated drinking water. In Phase II, which was a broader and more comprehensive assessment, 247 chemical and microbial analytes were measured in 25 DWTPs, with 148 detected at least once in the source water, and 121 detected at least once in the treated drinking water. The frequency of detection was often related to the analyte's contaminant class, as pharmaceuticals and anthropogenic waste indicators tended to be infrequently detected and more easily removed during treatment, while per and polyfluoroalkyl substances and inorganic constituents were both more frequently detected and, overall, more resistant to treatment. The data collected as part of this project will be used to help inform evaluation of unregulated contaminants in surface water, groundwater, and drinking water.

Science of the Total Environment

Climate, Fire and Geology in the Convergence of Mediterranean-type Climate Ecosystems

Integrating Climate, Fire and Geology in a Fire-prone World Fire challenges the long-standing hegemony of ecology, biogeography and paleoecology that climate and soils are sufficient to explain the origin and distribution of plant species. In a world where half of the land surface is fire-prone (Krawchuk et al . 2009), understanding the past and predicting the future requires a close integration of climate, fire and geology. The dogma that fire is an anthropogenic phenomenon of little use in understanding paleoecology (Axelrod 1980, 1989), or merely incidental to vegetation development (Hopper 2009), is rapidly being replaced with a better understanding of paleofire's impact on land plant evolution (Scott 2000; Pausas & Keeley 2009). Attempts to model future global vegetation patterns have been demonstrated to be inadequate without including both natural and anthropogenic fire regimes (Bond et al . 2005). Bond and Keeley (2005) outlined the conundrum posed by alternative explanations for the present distribution of vegetation and assembly of communities. Classical explanations have invoked resource-based mechanisms that are driven by climate and soils. There are ecosystems where resource-based mechanisms may be sufficient, but on many seasonally dry landscapes ecosystem processes such as fire play a major role in the organization and evolution of vegetation.

Book chapter

Water-temperature data acquisition activities in the United States

Along with the growing interest in water quality during the last decade, the need for data on all types of water-quality parameters has also increased. One parameter of particular interest, because of its many ramifications, is temperature. It influences many of the chemical and physical processes that take place in water. The solubility of gases--for example, oxygen and carbon dioxide--and the solution of mineral matter in water are functions of temperature. Such physical properties as density and viscosity vary with temperature. Oxidation of organic materials, as well as algal and bacterial growth, is promoted or retarded by favorable or unfavorable temperatures. Further, temperature bears on the utility of water: as a source of public water supplies; for industrial use, particularly if the water is used for cooling; and in the field of recreation involving contact sports, fishing, and fish culture. In recent years, temperature changes resulting from inflow of heated industrial waste, particularly effluent from power generating plants, have increased the need for temperature data to determine the degree of change, its effect on ecology, and the effect of any remedial action. Thus, because of the many extensive and intensive effects, a large amount of temperature data is collected on surface and ground waters by many agencies throughout the country. Moreover, because of its importance, there is a widespread interest in temperature even by those who are not active collectors of the data themselves. The industrialist, the manager, the public official, and others at one time or another may have need for temperature data and may well raise the questions: Who is collecting temperature data? What is the extent of the activity? Where are the data being collected? The purpose of this report is to answer these questions. The information in the report is confined to the activities of Federal and non-Federal agencies. It is based on information furnished to the Office of Water Data Coordination, U.S. Geological Survey, and published in the "Catalog of Information on Water Data, Index to Water Quality Section, Edition 1970." This is one of four indexes, each of which is a separate section of the Catalog. Three of the indexes, "Index to Water-Quality Section," "Index to Surface-Water Section," and "Index to Ground-.Water Stations," contain information on data acquired on a recurrent basis at specific locations for a period of 3 years or more. The fourth section, "Index to Areal Investigations and Miscellaneous Activities," is concerned with specific projects or shorter-term data activities that involve field or laboratory measurements or observations not included in any other section of the Catalog. The Catalog is a record of activities throughout the country (and in some places along the international border between the United States and Canada) conducted by Federal and non-Federal agencies engaged in the acquisition of water data and who furnish such information for presentation in the Catalog. The Catalog itself is an outgrowth of an assignment to the Department of the Interior and in turn to the Geological Survey, by the Office of Management and Budget, through the medium of OMB Circular A-67. This Circular states in part that one of the assigned responsibilities will be maintenance of a "central catalog of information on...water data and on Federal activities being planned or conducted to acquire such data." As an extension of this activity, non-Federal agencies are solicited to participate in the program. In this report, information is presented by means of tables and illustrations preceded by brief explanations. It includes the agencies collecting the data, the number of stations located on surface and ground waters where temperature measurements are made, the distribution of stations by States and by the 21 regions of the Water Resources Council (WRC) (a Federal agency created in accordance with the Water Resources Planning Act of 1965), and the frequency of measurements. Acquisition activities were not reported for those areas left blank on some illustrations. The report does not contain the actual temperature data. For this information, the particular agency, Federal or non-Federal, acquiring the data will have to be contacted. However, a bibliography at the end of this report lists 194 references which contain temperature data. Many of these references, especially the publications of the Geological Survey, may be available in major public and university libraries and libraries of Federal and non-Federal agencies.

Water-Resources Investigations Report

Status of water-quality conditions in the United States, 2010–20

Degradation of water quality can make water harmful or unusable for humans and ecosystems. Although many studies have assessed the effect of individual constituents or narrow suites of constituents on freshwater systems, no consistent, comprehensive assessment exists over the wide range of water-quality effects on water availability. Using published studies, data, and models completed at regional or national scales in the United States during 2010–20, this chapter moves towards a comprehensive assessment by summarizing how selected anthropogenic and geogenic water-quality constituents affect national-scale water availability for human and ecosystem needs. Several types of human health, agricultural, ecological, and beneficial-use standards or thresholds were used to provide context for categorizing surface-water and groundwater quality. Water availability for human and ecological use is limited by elevated concentrations of geogenic and anthropogenic constituents in surface and groundwater. Elevated concentrations of five geogenic constituents (arsenic, manganese, strontium, radium, and adjusted gross alpha) are common in groundwater and collectively affect the drinking water supply to over 30 million people. Surface water sourced drinking water supplies are impaired in about a third of assessed stream miles, most commonly because of non-mercury metals and salinity. Health-based violations at community water systems may disproportionately affect socially vulnerable communities. Ecological water uses are predominantly limited by nutrients, sediment, temperature, pathogens, salinity, and pesticides. Water availability for human and ecological use is adversely affected by human activities including human contaminant sources (for example, wastewater, agriculture), processes (for example, dredging, groundwater pumping), or permanent landscape modifications (for example, dams, urbanization). Primary contaminant sources vary spatially and include fertilizer and manure, atmospheric deposition, wastewater treatment plants, urban land, and a range of natural sources. Contaminants of emerging concern, contaminants without regulatory thresholds, and mixtures of geogenic and anthropogenic water contaminants also contribute to ecological degradation and human exposure.

conterminous United States

Revisiting the historic distribution and habitats of the Whooping Crane

The endangered Whooping Crane ( Grus americana ) historically had a wide distribution that covered diverse ecoregions across North America while retaining consistent habitat preferences within each ecoregion. We reevaluate the historic information compiled by Robert Porter Allen in 1952 and added 74 other records. Based on the ecological features of historic locations relative to crane life history, we revisit Allen’s description of the whooping crane’s niche and identify four features common to breeding and wintering areas: (1) gentle to rolling topography with an interspersion of wetland and prairie habitats, and relatively sparse cover of trees and shrubs; (2) high densities of shallow, open wetlands or wetland complexes; (3) hydrological regimes that provide reliable conditions for nesting, brood rearing, and flightless adults; and (4) high plant and animal productivity due to fertile soils, hydrological pulsing, periodic inflow of nutrients, or other periodic perturbations. Accurate determination of the ecological features that compose Whooping Crane habitats should stimulate renewed discussions about habitat requirements and can support development of improved reintroduction strategies for the long-term success of recovery efforts.

Book chapter