Isolation and characterization of novel microsatellite loci: Cross-species amplification and population genetic applications
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We studied the effects of predatory Sacramento squawfish ( Ptychocheilus grandis ) on habitat choice of juvenile California roach ( Lavinia symmetricus ), adult roach, and juvenile rainbow trout ( Oncorhynchus mykiss ) in artificial streams. In single-prey trials, the proportion of fish found in pool habitat declined in the presence of squawfish for juvenile roach (from 0.55 to 0.00), adult roach (from 0.88 to 0.13), and juvenile rainbow trout (0.70 to 0.15). The presence of squawfish did not affect the use of riffle and edge habitats. Of the fish found in shallow water, the proportion found in edge habitat declined from juvenile roach (0.95) to adult roach (0.80) to juvenile rainbow trout (0.23). We also conducted experiments designed to simulate invasion of an area by squawfish, in which adult roach and juvenile rainbow trout were tested together in the presence and absence of squawfish. The proportion of prey in pool habitat in the presence of squawfish was greater in the two-prey trials than in the single-prey trials for both adult roach (0.31 and 0.13, respectively) and juvenile rainbow trout (0.33 and 0.15, respectively). These results support field evidence that squawfish are an important force in determining the spatial structure of native stream fish assemblages.
Benthic organisms in the upper Clark Fork River have recently been implicated as a dietary source of metals that may be a chronic problem for young-of-the-year rainbow trout ( Oncorhynchus mykiss ). In this present study, early life stage brown trout ( Salmo trutta ) and rainbow trout were exposed for 88 d to simulated Clark Fork River water and a diet of benthic invertebrates collected from the river. These exposures resulted in reduced growth and elevated levels of metals in the whole body of both species. Concentrations of As, Cd, Cu, and Pb increased in whole brown trout; in rainbow trout, As and Cd increased in whole fish, and As also increased in liver. Brown trout on the metals-contaminated diets exhibited constipation, gut impaction, increased cell membrane damage (lipid peroxidation), decreased digestive enzyme production (zymogen), and a sloughing of intestinal mucosal epithelial cells. Rainbow trout fed the contaminated diets exhibited constipation and reduced feeding activity. We believe that the reduced standing crop of trout in the Clark Fork River results partly from chronic effects of metals contamination in benthic invertebrates that are important as food for young-of-the-year fish.
The avoidance response of brown trout ( Salmo trutta ) to mixtures of cadmium, copper, lead, and zinc was determined in water simulating the Clark Fork River, Montana. Effects of acidification on the avoidance response were also evaluated. Tests were conducted in a cylindrical chamber that received reference water at one end and metal-contaminated water at the other; a distinct boundary formed at the center where the chamber drained. A 1 × mixture of the four metals (Cd, 1.1 μg/L; Cu, 12 μg/L; Pb, 3.2 μg/L; and Zn, 55 μg/L) that was representative of the ambient metals concentrations of the Clark Fork River resulted in avoidance by brown trout. Brown trout also avoided 0.5×, 2×, 4×, and 10× mixtures but not a 0.1 × mixture. A reduction in pH from 8.0 to either 7.0, 6.0, or 5.0 resulted in significant avoidance. Avoidance reactions to metals, similar to those observed in our laboratory experiments, may contribute to the depression of brown trout populations in the Clark Fork River.
Atlantic salmon ( Salmo salar ) alevins were exposed to various aluminum (0–4700 μg/L) and four fluoride (0–500 μg/L) concentrations at two pH values (5.5 and 6.5) for 4- and 30-d periods. In the 4-d tests, aluminum with fluoride was less toxic at pH 6.5 than at pH 5.5, whereas without fluoride, pH had no effect. In the 30-d test, mortality in all treatments was 17–21% at pH 5.5, but only 3–7% at pH 6.5. Fish length and weight after 30 d were reduced in all fluoride–aluminum treatments at pH 5.5, but only in the 200-μg/L aluminum without fluoride treatment at pH 6.5. At pH 5.5 and 6.5 without aluminum, histomorphological examinations revealed no abnormalities in gill tissue. However, in aluminum exposure with no fluoride, gill filaments and secondary lamellae were swollen and thickened. Addition of fluoride at pH 6.5 alleviated some gill damage. At pH 5.5 and 200 μg/L aluminum, addition of 100 μg/L fluoride reduced swelling of gill lamellae, but 200 μg/L fluoride did not reduce swelling. Low fluoride concentrations (< 100 μg/L) may reduce gill morphological damage in fish exposed to aluminum in acidic waters, whereas high fluoride concentrations (> 100 μg/L) may not reduce aluminum-induced effects.
We evaluated the effect of metal associated with the gut content in immature aquatic insects (larvae and nymphs) on spatial and interspecific comparisons of whole-body metal concentrations. Four species, common to cobble-bottom rivers and streams, were collected along an established contamination gradient in the Clark Fork River, and from tributaries of the Clark Fork. Metal concentrations were determined in the gut and its content and in the insect body. Whole-body metal concentrations were higher and more variable as a result of gut content. The positive bias produced by the gut content did not alter interpretations of site contamination in most cases. Interspecific comparisons of metal bioaccumulation also were not greatly affected by the presence of gut content. The influence of gut content was specific for metal, species, and site. Feeding habit, gut size, and metal bioaccumulation in the body affected the relative contribution of the gut and its content to metal concentrations in the whole insect.
The disposition of malachite green was determined in channel catfish ( Ictalurus punctatus ) after intravascular dosing (0.8 mg . Kg -1 ) or waterborne exposure (0.8 mg . L -1 for 1 h). After intravascular dosing, mean plasma concentrations of the parent compound exhibited a triphasic decline with a terminal elimination half-life of 6.2 h. Malachite green was rapidly absorbed and concentrated in the tissues during waterborne exposure. The rate of accumulation was directly related to pH of the exposure water. After waterborne exposure, elimination of the parent compound from plasma also was triphasic with a terminal half-life of 4.7 h. In muscle, the half-life of the parent compound was approximately 67 h. Malachite green and its metabolites were widely distributed in all tissues. In fish exposed to C-14-labeled malachite green, total drug equivalent concentrations were highest in abdominal fat and lowest in plasma. Malachite green was rapidly and extensively metabolized to its reduced form, leucomalachite green, which was slowly eliminated from the tissues. Leucomalachite green is an appropriate target analyte for monitoring exposure of channel catfish to this drug.
Dead lake trout ( Salvelinus namaycush ) killed by sea lamprey (P etromyzon marinus ) were collected from the bottom of Lake Ontario using bottom trawls. The number of dead lake trout per hectare could be predicted from the number of type A-1 sea lamprey marks observed on live fish in September gillnet surveys ( r 2 = 0.60, P < 0.01) but not from the sum of marks of types A-1, A-2, and A-3 combined. Sea lamprey selectively attacked and killed the largest lake trout. The lengths and ages of live fish with A-1 marks increased as the population of longer, older lake trout in the lake increased, and the length distributions of fish killed by sea lamprey were not different ( P > 0.05) from those of live fish with A-1 marks in 5 of 6 years where comparisons could be made. Compared with Lake Superior strain lake trout, Seneca Lake strain fish were only 0.41 times as likely to be attacked by sea lamprey and were less likely to die from an attack (both differences P < 0.05). Conservative estimates of the numbers of lake trout killed by sea lamprey in southern Lake Ontario from October to mid-November ranged from 17,000 in 1988 to 121,000 in 1984.
The tributaries of Green Bay have long been recognized as major sources of phosphorus in the Lake Michigan basin. The status of Green Bay as a sink or source of phosphorus for Lake Michigan proper has been less well defined. The bay receives nearly 70% of its annual load of phosphorus ( 700 metric tons (t) · year-1) from a single source: the Fox River. Most of this phosphorus is deposited in sediments accumulating at rates that reach 160 mg · cm-2 · year-1 with an average of 20 mg · cm-2 · year-1. The phosphorus content of these sediments varies from <5 to >70 µmol · g-1. Deposition is highly focused, with ~70% of the total sediment accumulation and at least 80% of the phosphorus burial occurring within 20% of the surface area of the bay. Diagenetic and stoichiometric models of phosphorus cycling imply that >80% of the phosphorus deposited is permanently buried. External phosphorus loading to the bay is combined with sediment fluxes of phophorus to arrive at a simple phosphorus budget. Green Bay acts as an efficient nutrient trap, with the sediments retaining an estimated 70-90% of the external phosphorus inputs before flowing into Lake Michigan.
This study examined the relative importance of bottom-up and top-down controls of an arctic stream food web by simultaneous manipulation of the top predator and nutrient availability. We created a two-step trophic system (algae to insects) by removal of the top predator (Arctic grayling, Thymallus arcticus) in fertilized and control stream reaches. Fish abundance was also increased 10 times to examine the effect of high fish density on stream ecosystem dynamics and fish. We measured the response of epilithic algae, benthic and drifting insects, and fish to nutrient enrichment and to changes in fish density. Insect grazers had little effect on algae and fish had little effect on insects. In both the control and fertilized reaches, fish growth, energy storage, and reproductive response of females declined with increased fish density. Fish growth and energy storage were more closely correlated with per capita insect availability than with per capita algal standing stock
Blooms of the marine flagellate Heterosigma carterae have been associated with catastrophic fish kills at mariculture facilities around the world. The precise cause(s) of the sudden appearance and disappearance of Heterosigma surface blooms has not been completely described or understood. Environmental data from prior studies of blooms indicate the presence of vertical stratification of the water column that is often induced by freshwater runoff. We report the relatively rapid concentration of Heterosigma cells at the surface of tubes shortly after the addition of distilled water to the surface. This phenomenon of cell concentration in surface waters may partially explain the sudden appearance of Heterosigma cells near the surface and subsequent disappearance when vertical stratification is lost due to turbulence or mixing. The results may lead to bloom mitigation techniques for net pen aquaculture.
Investigations on juvenile American shad ( Alosa sapidissima ) revealed several physiological changes associated with downstream migration. Plasma chloride decreased 20% in wild juvenile shad during the autumn migration. Migrants had lower condition factor and hematocrit than non-migrant shad captured by beach seining. Gill Na + ,K + -ATPase activity of migrant shad was higher than non-migrant; a 2.5-fold increase was observed in 1993, while a 57% increase was observed in 1994. Similar changes were observed in laboratory studies of shad maintained in fresh water under simulated natural temperature and photoperiod. Plasma chloride dropped 68% and gill Na + ,K + -ATPase activity increased 3-fold over a 3-month period. Decreased plasma chloride was associated with increased mortality. Increases in gill Na + ,K + -ATPase activity decreases in plasma chloride and osmolality, and incidence of mortality were delayed and moderated, but not eliminated, in shad maintained at constant temperature (24°C). Shad did not survive in fresh water past December regardless of temperature regime. In seawater, all shad survived and showed no perturbation of plasma chloride at 24°C or simulated natural temperature (above 4°C). The decline in hyperosmoregulatory ability, as influenced by declining temperatures, may serve as a proximate cue for autumnal migration.
Gillnet selectivity for lake trout (Salvelinus namaycush) was estimated indirectly from catches in nets of 102-, 114-, 127-, 140-, and 152-mm stretch measure. Mesh selectivity was modeled as a nonlinear response surface that describes changes in the mean, standard deviation, and skewness of fish lengths across mesh sizes. Gillnet selectivity for lake trout was described by five parameters that explained 88% of the variation in wedged and entangled catches, 81% of the variation in wedged catches, and 82% of the variation in entangled catches. Combined catches of wedged and entangled lake trout were therefore described more parsimoniously than separate catches of wedged and entangled lake trout. Peak selectivity of wedged and entangled fish increased from 588 to 663 mm total length as mesh size increased from 102 to 152 mm, and relative selectivity peaked at a total length of 638 mm. The estimated lake trout population size-frequency indicated that gillnet catches were negatively biased toward both small and large lake trout. As a consequence of this bias, survival of Lake Superior lake trout across ages 9-11 was underestimated by about 20% when the catch curve was not adjusted for gillnet selectivity.
A qualitative male-specific DNA marker (OT-24) was amplified by spPCR (single-primer polymerase chain reaction) from chinook salmon (Oncorhynchus tshawytscha) DNA along with several non-sex-linked products. The termini of the male-specific product were sequenced, and a pair of PeR primers were constructed for marker-specific PCR amplification. Dual primer PCR (dpPCR), with the marker-specific primers, amplified a product from both nudes and females. The amount of dpPCR product amplified from males was at least 100-fold greater than that from females. The quantitative difference between males and females was consistent among geographically distinct populations from western U.S. rivers. In addition, DNA sequence analysis indicated that OT-24 was highly conserved among geographically distinct salmon populations. The qualitative spPCR product segregated through several genetic crosses indicating equal sex ratios among progeny. Identification of the male and female juveniles by dpPCR was consistent with the spPCR analysis. There was no tissue specificity observed by spPCR or dpPCR analysis of this marker. A rapid DNA extraction method and dpPCR analysis were used to nonlethally determine sex ratios in wild spring chinook salmon adults, withheld for genetic and behavioral studies, prior to their development of gross sexual differences in their external morphology.
Radiotelemetry data are often used to make inferences about an entire study population; therefore, the transmitter attachment method should be the one that least affects the study animal. Juvenile chinook salmon ( Oncorhynchus tshawytscha ) <120 mm in fork length (FL) with either gastrically or surgically implanted transmitters had significantly lower critical swimming speeds than control fish 1 and 19-23 days after tagging. For fish >120 mm FL, fish with gastric implants swam as well as controls 1 day but not 19-23 days after tagging. In contrast, fish with surgical implants swam as well as controls 19-23 days but not 1 day after tagging. During predation trials, fish with gastric or surgical implants were eaten by smallmouth bass ( Micropterus dolomieu ) in significantly greater numbers than controls. We do not recommend implanting transmitters (representing 4.6-10.4% of the fish's body weight) in fish <120 mm FL. Furthermore, surgical implants (representing 2.2-5.6% of the fish's body weight) may be the preferred method for biotelemetry studies of juvenile chinook salmon >120 mm FL.
The sites and rates of methyl mercury (MeHg) production and transport in littoral zone sediments were investigated at Pallette Lake in northern Wisconsin. In littoral areas where groundwater inflow occurs, sulfate supply from groundwater creates profiles of electron acceptors (sulfate) and donors (methane, sulfide) that are reversed from those found in sediments whose sulfate supply is delivered from overlying water. The highest MeHg concentrations in porewaters and the maximal advective MeHg flux rates (4.5-61.7 ng ·m -2 ·day -1 ) were observed in the spring, while highest bulk phase concentrations occur later in the summer. These estimated MeHg fluxes are greater than the mean areal production rates estimated previously for the water column and are similar to the atmospheric flux. Gross MeHg production was measured using the addition of 203 Hg as a tracer to sediments. The depth at which maximal 203 Hg methylation occurred coincided with the observed maximums in solid-phase and porewater MeHg concentrations. Because input, advection, and accumulation of MeHg in these sediments were measured directly, an independent estimate of MeHg production could be made and compared with 203 Hg-derived rates. This comparison suggests that that the 203 Hg tracer method provides reasonable estimates of gross methylation rates and that a substantial fraction of solid-phase Hg is available for methylation
The invertebrate fauna of nontidal portions of the lower San Joaquin River and its major tributaries is described in relation to water quality and habitat using canonical correspondence analysis, autecological metrics, and indicator species analysis. A large-scale (basin-wide) pattern in community response to salinity (sulfate-bicarbonate type) was detected when standardized, stable substratum was sampled. Community structure, taxa richness, and EPT (ephemeropterans, plecopterans, and trichopterans) richness varied with dissolved solids concentration (55-1700 mg total dissolved solids. L-1), and distributions of many taxa indicated salinity optima. Distinct assemblages associated with either high or low salinity were evident over this range. Large-scale patterns in community structure were unrelated to pesticide distributions. Structure and taxa richness of invertebrate assemblages in sand substratum varied both with salinity and with microhabitat heterogeneity. The benthic fauna generally was dominated by a taxa-poor assemblage of specialized psammophilous species, contributing to a weaker relationship between community structure and water quality than was observed using standardized substratum. Habitat types and associated dominant species were characterized using indicator species analysis. Species assemblages did not vary substantially with irrigation regime or fiver discharge, indicating that structure of invertebrate communities was a conservative measure of water quality.
Diet and growth of larval lake herring (Coregonus artedi) and lake whitefish (Coregonus clupeaformis) were compared in mesocosm experiments in a small mesotrophic lake in southeastern Michigan. Fish were sampled from single-species and mixed assemblages in 2-m 3 cages for 8 weeks during April and May. Both species initially ate mostly cyclopoid copepodites and small cladocerans (Bosmia spp.). Schoener's index of diet overlap showed considerable overlap (70-90%). Lake whitefish ate Daphnia spp. and adult copepods about 2 weeks earlier than did lake herring, perhaps related to their larger mean mouth gape. Lake whitefish were consistently larger than lake herring until the eighth week, especially in the sympatric treatments. Lake whitefish appeared to have a negative effect on the growth of lake herring, as lake herring in mixed-species treatments were smaller and weighed less than lake herring reared in single-species treatments. The diet similarities of lake whitefish and lake herring larvae could make them competitors for food in the Great Lakes. The greater initial size of lake whitefish could allow them to eat larger prey earlier and thereby limit availability of these prey to lake herring at a crucial period of development.