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USGS1998

A preliminary assessment of sources of nitrate in springwaters, Suwannee River basin, Florida

A cooperative study between the Suwannee River Water Management District (SRWMD) and the U.S. Geological Survey (USGS) is evaluating sources of nitrate in water from selected springs and zones in the Upper Floridan aquifer in the Suwannee River Basin. A multi-tracer approach, which consists of the analysis of water samples for naturally occurring chemical and isotopic indicators, is being used to better understand sources and chronology of nitrate contamination in the middle Suwannee River region. In July and August 1997, water samples were collected and analyzed from six springs and two wells for major ions, nutrients, and dissolved organic carbon. These water samples also were analyzed for environmental isotopes [ 18 O/ 16 O, D/H, 13 C/ 12 C, 15 N/ 14 N] to determine sources of water and nitrate. Chlorofluorocarbons (CCl 3 F, CCl 2 F 2 , and C 2 Cl 3 F 3 ) and tritium ( 3 H) were analyzed to assess the apparent ages (residence time) of springwaters and water from the Upper Floridan aquifer. Delta 15 N-NO 3 values in water from the six springs range from 3.94 per mil (Little River Springs) to 8.39 per mil (Lafayette Blue Spring). The range of values indicates that nitrate in the sampled springwaters most likely originates from a mixture of inorganic (fertilizers) and organic (animal wastes) sources, although the higher delta 15 N-NO 3 value for Lafayette Blue Spring indicates that an organic source of nitrogen is likely at this site. Water samples from the two wells sampled in Lafayette County have high delta 15 N-NO 3 values of 10.98 and 12.1 per mil, indicating the likelihood of an organic source of nitrate. These two wells are located near dairy and poultry farms, where leachate from animal wastes may contribute nitrate to ground water. Based on analysis of chlorofluorocarbons in ground water, the mean residence time of water in springs ranges from about 12 to 25 years. Chlorofluorocarbons-modeled recharge dates for water samples from the two shallow zones in the Upper Floridan aquifer range from 1985 to 1989.

Florida↗

USGS2010

Biological pathways of exposure and ecotoxicity values for uranium and associated radionuclides: Chapter D in Hydrological, geological, and biological site characterization of breccia pipe uranium deposits in Northern Arizona

This chapter compiles available chemical and radiation toxicity information for plants and animals from the scientific literature on naturally occurring uranium and associated radionuclides. Specifically, chemical and radiation hazards associated with radionuclides in the uranium decay series including uranium, thallium, thorium, bismuth, radium, radon, protactinium, polonium, actinium, and francium were the focus of the literature compilation. In addition, exposure pathways and a food web specific to the segregation areas were developed. Major biological exposure pathways considered were ingestion, inhalation, absorption, and bioaccumulation, and biota categories included microbes, invertebrates, plants, fishes, amphibians, reptiles, birds, and mammals. These data were developed for incorporation into a risk assessment to be conducted as part of an environmental impact statement for the Bureau of Land Management, which would identify representative plants and animals and their relative sensitivities to exposure of uranium and associated radionuclides. This chapter provides pertinent information to aid in the development of such an ecological risk assessment but does not estimate or derive guidance thresholds for radionuclides associated with uranium. Previous studies have not attempted to quantify the risks to biota caused directly by the chemical or radiation releases at uranium mining sites, although some information is available for uranium mill tailings and uranium mine closure activities. Research into the biological impacts of uranium exposure is strongly biased towards human health and exposure related to enriched or depleted uranium associated with the nuclear energy industry rather than naturally occurring uranium associated with uranium mining. Nevertheless, studies have reported that uranium and other radionuclides can affect the survival, growth, and reproduction of plants and animals. Exposure to chemical and radiation hazards is influenced by a plant’s or an animal’s life history and surrounding environment. Various species of plants, invertebrates, fishes, amphibians, reptiles, birds, and mammals found in the segregation areas that are considered species of concern by State and Federal agencies were included in the development of the site-specific food web. The utilization of subterranean habitats (burrows in uranium-rich areas, burrows in waste rock piles or reclaimed mining areas, mine tunnels) in the seasonally variable but consistently hot, arid environment is of particular concern in the segregation areas. Certain species of reptiles, amphibians, birds, and mammals in the segregation areas spend significant amounts of time in burrows where they can inhale or ingest uranium and other radionuclides through digging, eating, preening, and hibernating. Herbivores may also be exposed though the ingestion of radionuclides that have been aerially deposited on vegetation. Measured tissues concentrations of uranium and other radionuclides are not available for any species of concern in the segregation areas. The sensitivity of these animals to uranium exposure is unknown based on the existing scientific literature, and species-specific uranium presumptive effects levels were only available for two endangered fish species known to inhabit the segregation areas. Overall, the chemical toxicity data available for biological receptors of concern were limited, although chemical and radiation toxicity guidance values are available from several sources. However, caution should be used when directly applying these values to northern Arizona given the unique habitat and life history strategies of biological receptors in the segregation areas and the fact that some guidance values are based on models rather than empirical (laboratory or field) data. No chemical toxicity information based on empirical data is available for reptiles, birds, or wild mammals; therefore, the risks associated with uranium and other radionuclides are unknown for these biota.

Arizona↗

USGS2010

Shallow groundwater quality in the Village of Patchogue, Suffolk County, New York

The onsite disposal of wastewater within the Patchogue River Basin-a riverine estuary that discharges into Great South Bay, Suffolk County, Long Island, N.Y. -has adversely affected water quality and aquatic habitats within both the tidal and non-tidal portions of the river. In response to increased development within the approximately 14 square mile basin, the Village of Patchogue has expanded efforts to manage and protect the local groundwater resources, which sustain freshwater base flow and aquatic habitats. Water-quality samples from 10 shallow wells within the Village were collected in March 2009, before the start of seasonal fertilizer application, to document the effects of onsite wastewater disposal on groundwater discharging into the Patchogue River. Each sample was analyzed for physical properties (pH, dissolved oxygen, specific conductance, and temperature), nutrients, organic carbon, major ions, and trace elements. Water samples from eight wells were analyzed for stable isotopes of nitrogen. The nitrate concentration in one well was 40 milligrams per liter (mg/L), which exceeded the U.S. Environmental Protection Agency (USEPA) and New York State Department of Health (NYSDOH) maximum contamination level in drinking water of 10 mg/L. Sodium concentrations at nine wells exceeded the USEPA Drinking Water Advisory Taste Threshold of 60 mg/L. Dissolved iron concentrations at three wells exceeded the NYSDOH and USEPA Secondary Drinking Water Standard of 300 micrograms per liter (?g/L). Nitrogen isotope signatures (d15N) were determined and compared with those reported from previous studies in Nassau and Suffolk Counties to identify possible sources of the nitrate. Local variations in measured ammonia, nitrate, total nitrogen, phosphorus, and organic carbon concentrations and d15N signatures indicate that nitrate enters the surficial aquifer from several sources (fertilizer, septic waste, and animal waste) and reflects biogeochemical processes such as denitrification.

Scientific Investigations Report↗

USGS2010

Hydrological, geological, and biological site characterization of breccia pipe uranium deposits in Northern Arizona

On July 21, 2009, U.S. Secretary of the Interior Ken Salazar proposed a two-year withdrawal of about 1 million acres of Federal land near the Grand Canyon from future mineral entry. These lands are contained in three parcels: two parcels on U.S. Bureau of Land Management land to the north of the Grand Canyon (North and East Segregation Areas) and one on the Kaibab National Forest south of the Grand Canyon (South Segregation Area). The purpose of the two-year withdrawal is to examine the potential effects of restricting these areas from new mine development for the next 20 years. This proposed withdrawal initiated a period of study during which the effects of the withdrawal must be evaluated. At the direction of the Secretary, the U.S. Geological Survey began a series of short-term studies designed to develop additional information about the possible effects of uranium mining on the natural resources of the region. Dissolved uranium and other major, minor, and trace elements occur naturally in groundwater as the result of precipitation infiltrating from the surface to water-bearing zones and, presumably, to underlying regional aquifers. Discharges from these aquifers occur as seeps and springs throughout the region and provide valuable habitat and water sources for plants and animals. Uranium mining within the watershed may increase the amount of radioactive materials and heavy metals in the surface water and groundwater flowing into Grand Canyon National Park and the Colorado River, and deep mining activities may increase mobilization of uranium through the rock strata into the aquifers. In addition, waste rock and ore from mined areas may be transported away from the mines by wind and runoff.

Scientific Investigations Report↗

USGS2001

Ground-water quality, levels, and flow direction near Fort Cobb Reservoir, Caddo County, Oklahoma, 1998-2000

Fort Cobb Reservoir in northwest Caddo County Oklahoma is managed by the Bureau of Reclamation for water supply, recreation, flood control, and wildlife. Excessive amounts of nitrogen in the watershed have the potential to cause long-term eutrophication of the reservoir and increase already elevated concentrations of nitrogen in the Rush Springs aquifer. The U.S. Geological Survey in cooperation with the Bureau of Reclamation studied ground water in the area surrounding a swine feeding operation located less than 2 miles upgradient from Fort Cobb Reservoir in Caddo County, Oklahoma. Objectives of the study were to (1) determine if the operation was contributing nitrogen to the ground water and (2) measure changes in ground-water levels and determine the local ground-water flow direction in the area surrounding the swine feeding operation. Nitrate concentrations (28.1 and 31.5 milligrams per liter) were largest in two ground-water samples from a well upgradient of the wastewater lagoon. Nitrate concentrations ranged from 4.30 to 8.20 milligrams per liter in samples from downgradient wells. Traces of ammonia and nitrite were detected in a downgradient well, but not in upgradient wells. d15N values indicate atmospheric nitrogen, synthetic fertilizer, or plants were the predominate sources of nitrate in ground water from the downgradient wells. The d15N values in these samples are depleted in nitrogen-15, indicating that animal waste was not a significant contributor of nitrate. Manganese concentrations (1,150 and 965 micrograms per liter) in samples from a downgradient well were substantially larger than concentrations in samples from other wells, exceeding the secondary drinking-water standard of 50 micrograms per liter. Larger concentrations of bicarbonate, magnesium, fluoride, and iron and a higher pH were also measured in water from a downgradient well. Ground-water levels in an observation well were higher from April to mid-July and lower during the late summer and in the fall due to a seasonal decrease in precipitation, increase in water withdrawals, and increase in evapotranspiration. Ground water near the wastewater spray field moved south-southeast toward Willow Creek along a gradient of about 50 feet per mile. Analysis of ground-water samples suggest that commercial fertilizer is contributing nitrate upgradient of the swine feeding operation and that wastewater from the lagoon is contributing reduced forms of nitrogen, ammonia and nitrite. Additional downgradient wells would be needed to (1) determine if the swine feeding operation is adding excessive amounts of nitrogen to ground water, (2) determine the vertical dimension of wastewater flow, and (3) the extent of wastewater downgradient of the lagoon.

Water-Resources Investigations Report↗

USGS1976

Summary appraisals of the nation's ground-water resources – California region

Most people in the California Region live in a semiarid or arid climate, with precipitation less than the potential evapotranspiration- environments of perennial water deficiency. The deficiency becomes most onerous during the characteristically rainless summers and during recurrent droughts that may continue for 10--20 years. However, water from winter rain and snow can be stored for use during the dry summer months, and water stored during a wet climatic period can be used in a succeeding dry period; moreover, perennial deficiency can be overcome by bringing water from areas of perennial surplus. Ground-water reservoirs have especial significance in arid and semiarid regions as repositories where water is stored or can be stored with minimum loss by evaporation. Nearly all the ground-water reservoirs of the California Region are in alluvial sediments of valleys and plains that flank the mountain ranges. The largest, underlying the vast Central Valley, occupies 10 percent of the area of the region, has an estimated usable capacity exceeding 100 million acre-feet (125 cubic kilometres), and has an annual pumpage from wells of about 13 million acre-feet (16 cubic kilometres). Another 10 percent of the region is occupied by 55 developed ground-water reservoirs that are widely distributed; aggregate annual pumpage from them is about 3 1/2 million acre-feet (4 cubic kilometres). In the southeastern desert about 60 ground-water reservoirs occupy still another 10 percent of the region; these have been explored only enough to show that most have some usable water, but current use is negligible. In northeastern California and adjacent Oregon and Nevada, ground-water reservoirs are identified only in valleys and lowlands where wells are feasible, but basaltic rocks of the Cascade Range and Modoc Plateau are excellent aquifers distributed over an area constituting about 15 percent of the region. In sum, slightly less than half the California Region is underlain by ground-water reservoirs, either in valley fill or in volcanic rocks, which can yield significant quantities of water to wells. The rest of the California Region includes the mountains, canyons, slopes, and foothills of the Sierra Nevada, Coast Ranges, and Basin Ranges, whose consolidated rocks and products of their weathering may be permeable locally but are not generally so. Here, the prevailing method of ground-water development is still mostly trial and error, and while in many places a well can yield enough water for a family, some families might have to do without amenities such as flush toilets and automatic washers. For more than half a century the California Region has led all others in North America in pumping of ground water as well as in the area, variety, yield, and export of crops irrigated by water from wells. It has led in the development and use of deep-well turbine pumps for large yield and in the drilling of water wells to great depths. At the same time, such developments have resulted in the elimination of artesian pressures that produced thousands of flowing wells in the 19th century and led to the wide distribution of "falling water tables." Also, California was first to induce encroachment of seawater into wells (in 1906); first to recognize subsidence of land caused by pumping from wells (in 1933), generating news about land sinking in San Jose, Long Beach, and along the Delta-Mendota and Friant-Kern Canals; and first to experience pollution of ground-water reservoirs by brines, chemicals, industrial wastes, and petroleum byproducts including gasoline. The region has led in research in several fields leading to solution of many of these problems. Ground-water problems developed rapidly after World War II with booming population, agriculture, industry, and water demand during several years of regionwide drought. Water levels in wells trended downward almost everywhere as a natural effect of the drought and at accelerated rates in areas of pumping for new enterprises or to supplement subnormal surface-water supplies. The declines in many pumping areas exceeded 100 feet (30 metres), and in some confined aquifers the potentiometric surface was drawn down more than 330 feet (100 metres). The depletion of ground-water storage has had "permanent" side effects, including subsidence of the land exceeding 10 feet (3 metres) in extensive areas, and seawater intrusion that ended the useful lives of many wells along the coast and as much as 6 miles (10 kilometres) inland. Some problems have been solved, but these solutions have at times created other problems. Many ground-water reservoirs have gone through one or more stages - exploration for productive aquifers, exploitation and development for use of the water, restriction to the perennial supply or "safe" yield, importation of surface water, artificial recharge of ground water, conjunctive use of surface and ground water, protection of water quality, and integrated management of use and disposal of water. This evolutionary sequence is unique for each reservoir, and so generalizations become difficult in a regional appraisal; also, the changes with time are significant and varied, and knowledge of prior events is a prerequisite in an appraisal of the resource in a specific year. As of 1970, water levels in many wells had risen significantly from the minimum levels of record reached during the 1960's or earlier; only in areas of new development and in desert areas of long-continued "mining" of nonreplenished water was ground-water storage still being depleted. Land subsidence has continued at diminishing rates and practically has come to a halt in some areas; invading seawater has been stopped or nudged back in most places where problems were significant. The current, favorable situation has been helped by climatic variations, from drought in 1945-52 and exceedingly dry years in 1959 and 1961 to above-normal precipitation in 1969 and 1970; but most of the serious problems have been solved by human efforts, including especially the implementation of the California Water Plan, transporting water from areas of perennial surplus to areas where it is used in lieu of ground water or for ground-water replenishment. All major urban areas now import water to supplement or replace the water pumped from wells. Extensive agricultural areas that formerly were irrigated solely by ground water now obtain some of their water from surface reservoirs and canals, especially in the Central Valley. With surface water available as an alternative supply, well owners can view their ground water with complacency. But complacency can lead to neglect and carelessness and consequent deterioration of the ground-water resource by pollution. Claiming heritage from the English Common Law, the existing California law grants to the landowner (riparian) and private enterprise (appropriator) rights to the water stored in ground-water reservoirs or discharged from them, including the base flow of streams. Ground-water development has been by private and local enterprise, and the California legislature has protected and encouraged local responsibility, control, and management of ground water. As to surface water, a constitutional amendment in 1928 limited riparian rights to the quantities of water that were "reasonably required for the beneficial use to be served." The surpluses have become public waters which are collected, stored, transported, and delivered under various contracts by Federal, State, and other agencies. The agencies have not stored water underground because of uncertainty as to their rights, but some local agencies have been encouraged with favorable pricing schedules to undertake the artificial recharge and management of ground-water reservoirs. Thus, conjunctive use of surface and ground water has become a matter of interagency negotiation. Of all the constraints on effective use of ground-water reservoirs, the most formidable may be the attitudes of people. Assurance of water supply is vital in areas of water deficiency, and Government has assumed increasing responsibility for the welfare of people in these areas. Unfortunately, when Government provides this assurance, most beneficiaries demand continued subsidy to the exclusion of perhaps cheaper private development. Indeed, as the water resources are presently segregated-with private rights predominant in ground water and public interest dominant in surface water-ground-water development has suffered for lack of public concern. The region has the scientific and technologic capability for effective use of groundwater reservoirs, as shown by the achievements and programs of several districts, but many districts are not organized or staffed for such comprehensive management and will need assistance and scientific expertise available from State and Federal agencies. Those agencies, in turn, may not have the scientific data that are essential to prevent haphazard activities and to enable programs to be organized for the most effective and attractive utilization of the water resources. In these days of increasing concern over pollution, existing data are generally inadequate to assess the natural deterioration of ground waters as a basis for defining pollution.

California↗

USGS2016

Groundwater quality, age, and susceptibility and vulnerability to nitrate contamination with linkages to land use and groundwater flow, Upper Black Squirrel Creek Basin, Colorado, 2013

The Upper Black Squirrel Creek Basin is located about 25 kilometers east of Colorado Springs, Colorado. The primary aquifer is a productive section of unconsolidated deposits that overlies bedrock units of the Denver Basin and is a critical resource for local water needs, including irrigation, domestic, and commercial use. The primary aquifer also serves an important regional role by the export of water to nearby communities in the Colorado Springs area. Changes in land use and development over the last decade, which includes substantial growth of subdivisions in the Upper Black Squirrel Creek Basin, have led to uncertainty regarding the potential effects to water quality throughout the basin. In response, the U.S. Geological Survey, in cooperation with Cherokee Metropolitan District, El Paso County, Meridian Service Metropolitan District, Mountain View Electric Association, Upper Black Squirrel Creek Groundwater Management District, Woodmen Hills Metropolitan District, Colorado State Land Board, and Colorado Water Conservation Board, and the stakeholders represented in the Groundwater Quality Study Committee of El Paso County conducted an assessment of groundwater quality and groundwater age with an emphasis on characterizing nitrate in the groundwater. Groundwater-quality samples were collected from 50 randomly selected wells between May and June 2013. The samples were analyzed for major ions, nutrients, dissolved gases, tritium ( 3 H), chlorofluorocarbons (CFC-11, CFC-12, and CFC-113), and fuel products (such as benzene, toluene, ethylbenzene, and xylenes). None of the groundwater samples exceeded the U.S. Environmental Protection Agency (EPA) National Primary Drinking Water Regulations for primary maximum contaminant levels (MCL) for major ions. Secondary maximum contaminant levels, which are not health concerns and affect mainly taste, color, or odor of the water, were observed in rare instances for pH (2 samples), chloride (1 sample), iron (3 samples), and manganese (8 samples). The secondary maximum contaminant level for total dissolved solids was also exceeded for two samples. Nitrate (nitrite plus nitrate as nitrogen in groundwater) was elevated above the estimated background concentration of natural recharge waters of 1 milligram per liter (mg/L) in 44 of the 50 wells sampled and showed a median concentration of 5.4 mg/L. Nitrate concentrations were above the MCL of 10 mg/L in 5 of the 50 wells sampled and above half of the EPA MCL (5 mg/L) in 27 of the 50 wells sampled, which included samples above the MCL. Dissolved-oxygen concentrations exceeded 0.5 mg/L in 95 percent of reported values (40 of 42 samples) and exceeded 2.0 mg/L in 90 percent of reported values (38 of 42 samples). The oxidized conditions observed in most areas indicate that nitrate from fertilizers and animal or human waste was geochemically stable and could persist in the groundwater for decades or perhaps longer. A historical analysis of median nitrate concentrations over nearly three decades showed an increase in nitrate of approximately 1 mg/L from 4.3 to 5.4 mg/L, although the increase was not determined to be significantly different using nonparametric statistical methods. Major-ion data indicate that groundwater representative of the primary aquifer was classified as calcium-sodium bicarbonate type water. Other water samples from wells located mainly along the periphery of the primary aquifer had cation-anion compositions consistent with distinct water sources, including groundwater contributions from the underlying bedrock aquifers. The areas with differentiable water sources were located mainly where alluvial deposits were thin and geologic contacts to the underlying bedrock aquifers were relatively shallow. Nitrate concentrations in the groundwater were evaluated for relations to land use. An agricultural region was defined using a sequence of land satellite imagery. Groundwater flow directions interpreted from median water-table elevations measured from 2000 to 2013 were used in conjunction with cropland locations to define the agricultural region boundaries by encompassing potential pathways of nitrate transport in the groundwater from nitrogen-based fertilizers. A statistically significant higher median nitrate concentration was observed for areas inside the agricultural region (6.7 mg/L) compared to areas outside the agricultural region (2.3 mg/L), although median concentrations in both areas were below the MCL (10 mg/L). Median nitrate concentration was also significantly greater in land parcels with septic use (4.9 mg/L) compared to nonseptic parcels (1.7 mg/L). In general, agriculture or septic use was identified as the primary source of nitrate, depending on location, while commercial, county, grazing, and residential land uses were generally secondary sources of nitrate. Apparent groundwater ages were estimated from chlorofluorocarbons (CFC-11, CFC-12, and CFC-113) and tritium ( 3 H) data using models that assumed piston flow and binary mixing (dilution of a young component with old, tracer-free water). The mean and median groundwater ages were about 30 years and the standard deviation was 6 years, indicating that most groundwater in the primary aquifer was “young” water that had recharged to the aquifer over the last few decades (post-1950s). The median fraction of young water was about 71 percent, and the standard deviation was 29 percent. The remaining water predated the 1950s, which may have originated from deeper geologic formations or may represent slow moving groundwater within the primary aquifer. Some of the oldest groundwater ages (older than 30 years) were observed in the upper reaches of the aquifer to the northwest where the primary aquifer is thin and intersects bedrock, supporting the hypothesis of geochemically distinct groundwater entering the primary aquifer from below. Groundwater that had reached the central part of the aquifer from upgradient areas of the basin was variable in age because of differences in flow paths and travel velocities. The groundwater age analysis showed that current (2013) land-use practices could affect water quality over decades to come, and that responses to remedial actions could be slow, especially for constituents, such as nitrate, that are stable under oxidized conditions. Fuel products (including acetone, benzene, diisopropyl ether, ethylbenzene, methyl acetate, methyl tertiary butyl ether (MTBE), methyl tert-pentyl ether, m- + p-xylene, o-xylene, tert-amyl alcohol, tert-butyl alcohol, tert-butyl ethyl ether, and toluene) were analyzed in groundwater from 49 of the 50 wells. Water from seven sites had detections for fuel compounds; all concentrations were below MCL. The results provided assurance of water quality and a valuable baseline to evaluate future trends of fuel constituents as the region is further developed. Probability maps were developed from logistic regression models to examine the likelihood that nitrate concentrations in groundwater exceeded specified levels. Susceptibility analysis examined relations between mid-level (5.0 mg/L) nitrate concentrations and climatic, hydrologic, and geologic variables; the significant variables were identified as depth to groundwater, soil organic matter, and soil water storage to 25-centimeter (cm) depth. The vulnerability assessments included natural factors driving susceptibility but also human factors related to land use and septic use. Vulnerability to low-level (2.5 mg/L) nitrate was related to depth to groundwater, septic zoning, and soil organic matter. The results highlighted that septic zoning affected low-level nitrate concentrations. Vulnerability to mid-level (5.0 mg/L) nitrate was examined using all 50 samples and also with two data outliers removed, which showed relatively high nitrate concentrations but also anomalous water chemistry or were located beyond the primary study area. Vulnerability to mid-level (5.0 mg/L) nitrate using all 50 samples was related to depth to groundwater, land use, septic use within a 500-meter (m) radius, soil water storage to a 25-cm depth, soil organic matter, and whether a location was within the agricultural region. The mid-level (5.0 mg/L) vulnerability model using 48 samples (two outliers removed) produced the best overall fit and was related to the same variables as when using all samples except septic use. The results for mid-level vulnerability provided additional support that septic use was associated with low levels of nitrate in the groundwater. Soil properties and land use were identified as the main drivers of moderate nitrate concentrations. Probabilities of exceeding low-level nitrate concentrations were high in most areas with the lowest probabilities usually to the northwest along thin geologic deposits in the upper part of the basin. The results of this investigation offer the foundational information needed for developing best management practices to mitigate nitrate contamination, basic concepts on water quality to aid public education, and information to guide regulatory measures if policy makers determine this is warranted. Science-based decision making will require continued monitoring and analysis of water quality in the future.

Colorado↗

USGS2024

Modeled coastal-ocean pathways of land-sourced contaminants in the aftermath of Hurricane Florence

Extreme precipitation during Hurricane Florence, which made landfall in North Carolina in September 2018, led to breaches of hog waste lagoons, coal ash pits, and wastewater facilities. In the weeks following the storm, freshwater discharge carried pollutants, sediment, organic matter, and debris to the coastal ocean, contributing to beach closures, algae blooms, hypoxia, and other ecosystem impacts. Here, the ocean pathways of land-sourced contaminants following Hurricane Florence are investigated using the Regional Ocean Modeling System (ROMS) with a river point source with fixed water properties from a hydrologic model (WRF-Hydro) of the Cape Fear River Basin, North Carolina's largest watershed. Patterns of contaminant transport in the coastal ocean are quantified with a finite duration tracer release based on observed flooding of agricultural and industrial facilities. A suite of synthetic events also was simulated to investigate the sensitivity of the river plume transport pathways to river discharge and wind direction. The simulated Hurricane Florence discharge event led to westward (downcoast) transport of contaminants in a coastal current, along with intermittent storage and release of material in an offshore (bulge) or eastward (upcoast) region near the river mouth, modulated by alternating upwelling and downwelling winds. The river plume patterns led to a delayed onset and long duration of contaminants affecting beaches 100 km to the west, days to weeks after the storm. Maps of the onset and duration of hypothetical water quality hazards for a range of weather conditions may provide guidance to managers on the timing of swimming/shellfishing advisories and water quality sampling.

Journal of Geophysical Research: Oceans↗

USGS1979

Water resources of the Port Madison Indian Reservation, Washington

The study summarized in this report was made to provide Suquamish Tribal leaders with information on the reservation's surface- and ground-water resources. The Tribal leaders need this information to help them manage and protect their water resources against overdevelopment. The quantity of ground water that is estimated to be available for withdrawal on a long-term basis is about 600 million gallons per year in the western part of the reservation and 400 million gallons per year in the eastern part of the reservation. It should be possible, economically and practically, to capture at least 40 percent of this ground water with properly constructed and located wells before it is discharged into the sea. This is enough water to supply at least 5,000 and 3,500 people with domestic water in these respective areas—about four times the present population. Of nine stream sites that were studied on and near the reservation, the lowest average streamflows for a 7-day period estimated to occur an average of once in 2 years were 1.3 cubic feet per second or less. Streams at three of the sites have been observed dry at least once. The short period of data collection during this study limits the accuracy of statistical estimates of low flows. Both surface and ground water were found to be of good quality with no unusual or harmful constituents; there was no evidence of major pollution in 1977. In the future, seawater intrusion into the ground-water system and pollution of the surface water by improperly treated sewage waste water could become problems.

Washington↗

USGS2007

Hydrology, Water Quality, and Surface- and Ground-Water Interactions in the Upper Hillsborough River Watershed, West-Central Florida

A study of the Hillsborough River watershed was conducted between October 1999 through September 2003 to characterize the hydrology, water quality, and interaction between the surface and ground water in the highly karstic uppermost part of the watershed. Information such as locations of ground-water recharge and discharge, depth of the flow system interacting with the stream, and water quality in the watershed can aid in prudent water-management decisions. The upper Hillsborough River watershed covers a 220-square-mile area upstream from Hillsborough River State Park where the watershed is relatively undeveloped. The watershed contains a second order magnitude spring, many karst features, poorly drained swamps, marshes, upland flatwoods, and ridge areas. The upper Hillsborough River watershed is subdivided into two major subbasins, namely, the upper Hillsborough River subbasin, and the Blackwater Creek subbasin. The Blackwater Creek subbasin includes the Itchepackesassa Creek subbasin, which in turn includes the East Canal subbasin. The upper Hillsborough River watershed is underlain by thick sequences of carbonate rock that are covered by thin surficial deposits of unconsolidated sand and sandy clay. The clay layer is breached in many places because of the karst nature of the underlying limestone, and the highly variable degree of confinement between the Upper Floridan and surficial aquifers throughout the watershed. Potentiometric-surface maps indicate good hydraulic connection between the Upper Floridan aquifer and the Hillsborough River, and a poorer connection with Blackwater and Itchepackesassa Creeks. Similar water level elevations and fluctuations in the Upper Floridan and surficial aquifers at paired wells also indicate good hydraulic connection. Calcium was the dominant ion in ground water from all wells sampled in the watershed. Nitrate concentrations were near or below the detection limit in all except two wells that may have been affected by fertilizer or animal waste. Wells at the Blackwater Creek and Hillsborough River at State Road 39 transects showed little seasonal variation in dissolved organic carbon. Dissolved organic carbon concentrations, however, were greater during the wet season than during the dry season at the Hillsborough River Tract transect, indicating some influence from surface-water sources. During dry periods, streamflow in the upper Hillsborough River was sustained by ground water from the underlying Upper Floridan aquifer. During wet periods, streamflow had additional contributions from runoff, and release of water from extensive riverine wetlands, and by overflow from the Withlacoochee River. In contrast, streamflow in Blackwater and Itchepackesassa Creeks was less constant, with many no-flow days occurring during dry periods. During wet season storm events, streamflow peaks occur more rapidly because there is greater confinement between the surficial deposits and the Upper Floridan aquifer, and these creeks have been highly channelized, leaving less of the adjacent wetlands intact. During dry periods, Blackwater Creek is dry upstream from its confluence with Itchepackesassa Creek, and all downstream flow is from Itchepackesassa Creek. Much of the dry season flow in Itchepackesassa Creek originates from a treated wastewater effluent outfall located on East Canal. Long-term streamflow at the Hillsborough River and Blackwater Creek stations was greater than the discharge observed during the study period. Water quality in the upper Hillsborough River is influenced by ground-water discharge. The chemical composition of water from Blackwater Creek, Itchepackesassa Creek, and East Canal was more variable because there was less ground-water discharge to these creeks than to the upper Hillsborough River, and because of the influence of wastewater effluent. Strontium isotope data indicated that the source of the water at all Hillsborough River sites during the dry season was the Oli

Scientific Investigations Report↗

USGS2010

Tet and sul antibiotic resistance genes in livestock lagoons of various operation type, configuration, and antibiotic occurrence

Although livestock operations are known to harbor elevated levels of antibiotic resistant bacteria, few studies have examined the potential of livestock waste lagoons to reduce antibiotic resistance genes (ARGs). The purpose of this study was to determine the prevalence and examine the behavior of tetracycline [tet(O) and tet(W)] and sulfonamide [sul(I) and su/(II)] ARGsin a broad cross-section of livestock lagoons within the same semiarid western watershed. ARGs were monitored for one year in the water and the settled solids of eight lagoon systems by quantitative polymerase chain reaction. In addition, antibiotic residues and various bulk water quality constituents were analyzed. It was found that the lagoons of the chicken layer operation had the lowest concentrations of both tet and sul ARGs and low total antibiotic concentrations, whereas su ARGs were highest in the swine lagoons, which generally corresponded to the highest total antibiotic concentrations. A marginal benefit of organic and small dairy operations also was observed compared to conventional and large dairies, respectively. In all lagoons, su ARGs were observed to be generally more recalcitrant than tet ARGs. Also, positive correlations of various bulk water quality constituents were identified with tet ARGs but not sul ARGs. Significant positive correlations were identified between several metals and tet ARGs, but Pearson's correlation coefficients were mostly lower than those determined between antibiotic residues and ARGs. This study represents a quantitative characterization of ARGs in lagoons across a variety of livestock operations and provides insight into potential options for managing antibiotic resistance emanating from agricultural activities.

Environmental Science & Technology↗

USGS2006

Demographic patterns and harvest vulnerability of chronic wasting disease infected white-tailed deer in Wisconsin

Chronic wasting disease (CWD) is a fatal disease of white-tailed deer (Odocoileus virginianus) caused by transmissible protease-resistant prions. Since the discovery of CWD in southern Wisconsin in 2001, more than 20,000 deer have been removed from a >2,500-km2 disease eradication zone surrounding the three initial cases. Nearly all deer removed were tested for CWD infection and sex, age, and harvest location were recorded. Our analysis used data from a 310-km2 core study area where disease prevalence was higher than surrounding areas. We found no difference in harvest rates between CWD infected and noninfected deer. Our results show that the probability of infection increased with age and that adult males were more likely to be infected than adult females. Six fawns tested positive for CWD, five fawns from the core study area, including the youngest (5 months) free-ranging cervid to test positive. The increase in male prevalence with age is nearly twice the increase found in females. We concluded that CWD is not randomly distributed among deer and that differential transmission among sex and age classes is likely driving the observed patterns in disease prevalence. We discuss alternative hypotheses for CWD transmission and spread and, in addition, discuss several possible nonlinear relationships between prevalence and age. Understanding CWD transmission in free-ranging cervid populations will be essential to the development of strategies to manage this disease in areas where CWD is found, as well as for surveillance strategies in areas where CWD threatens to spread.

Journal of Wildlife Management↗

USGS2006

Chronic wasting disease infection patterns in female white-tailed deer related to demographics, genetic relationships, and spatial proximity of infected deer in southern Wisconsin

Chronic wasting disease (CWD) is a fatal disease of white-tailed deer (Odocoileus virginianus) caused by transmissible protease resistant prions. Since the discovery of CWD in southern Wisconsin in 2001, more than 20,000 deer have been removed from a >2,500 km2 disease eradication zone surrounding the three initial cases. Nearly all deer removed were tested for CWD infection and sex, age, and harvest location were recorded. Our analysis used data from a 310 kin2 core study area where disease prevalence was higher than surrounding areas. We found no difference in harvest rates between CWD infected and non-infected deer. Ow results show that the probability of infection increased with age and that adult males were more likely to be infected than adult females. Six fawns tested positive for CWD, five fawns from the core study area, including the youngest (5 months) kee-ranging cervid to test positive. The increase in male prevalence with age is nearly twice the increase found in females. We concluded that CWD is not randomly distributed among deer and that differential transmission among sex and age classes is likely driving the observed patterns in disease prevalence. We discuss alternative hypotheses for CWD transmission and spread and, in addition, discuss several possible non-linear relationships between prevalence and age. Understanding CWD transmission in free-ranging cervid populations will be essential to the development of strategies to manage this disease in areas where CWD is found as well as for surveillance strategies in areas where CWD threatens to spread.

Wisconsin↗

USGS1996

A watershed-scale approach to tracing metal contamination in the environment

Introduction Public policy during the 1800's encouraged mining in the western United States. Mining on Federal lands played an important role in the growing economy creating national wealth from our abundant and diverse mineral resource base. The common industrial practice from the early days of mining through about 1970 in the U.S. was for mine operators to dispose of the mine wastes and mill tailings in the nearest stream reach or lake. As a result of this contamination, many stream reaches below old mines, mills, and mining districts and some major rivers and lakes no longer support aquatic life. Riparian habitats within these affected watersheds have also been impacted. Often, the water from these affected stream reaches is generally not suitable for drinking, creating a public health hazard. The recent Department of Interior Abandoned Mine Lands ( AML ) Initiative is an effort on the part of the Federal Government to address the adverse environmental impact of these past mining practices on Federal lands. The AML Initiative has adopted a watershed approach to determine those sites that contribute the majority of the contaminants in the watershed. By remediating the largest sources of contamination within the watershed, the impact of metal contamination in the environment within the watershed as a whole is reduced rather than focusing largely on those sites for which principal responsible parties can be found. The scope of the problem of metal contamination in the environment from past mining practices in the coterminous U.S. is addressed in a recent report by Ferderer (1996). Using the USGS 1:2,000,000-scale hydrologic drainage basin boundaries and the USGS Minerals Availability System ( MAS ) data base, he plotted the distribution of 48,000 past-producing metal mines on maps showing the boundaries of lands administered by the various Federal Land Management Agencies ( FLMA ). Census analysis of these data provided an initial screening tool for prioritization of watersheds in the western U.S. A different approach to the scope of the abandoned mine problem (Church et al., 1996a) is shown by the water quality data collected by the States under the Clean Water Act, section 305(b). These data document the stream reaches affected by metals from naturally occurring sources as well as from mining, or mineral resource extraction. Permitted discharges from active industrial and mine sites are not covered in the 305(b) data base. Local citizens and state and federal agencies are all part of the collaborative decision process used to select the drainage basins chosen for the AML Initiative pilot studies. Data gathered by these three entities were brought to bear on the watershed selection process. The USGS prepared data available from Federal data bases in the form of interpretative GIS products. Maps of the states of Colorado (Plumlee et al., 1995) and a similar study of the state of Montana ( USGS , unpublished data) were used to select the Animas watershed in southwestern Colorado and the Boulder watershed southwest of Helena Montana as the pilot study areas for the AML Initiative. Thus, the watersheds selected for study were public decisions made on the basis of available scientific data. The role of the U.S. Geological Survey in the Abandoned Mine Land Initiative is outlined in Buxton et al. (1997). The watershed approach to metals contamination in the environment has been studied in several drainage basins (Church et al., 1993, 1994, 1995, 1996b; Kimball et al., 1995). The underlying principles used to successfully discriminate between sources and to quantify the impact of these sources on the environment are the subject of this report.

Conference Paper↗

USGS2021

Nitrogen and phosphorus loads from groundwater to Lake Spokane, Spokane, Washington, October 2016–October 2019

Shallow nearshore groundwater and estimates of groundwater seepage were collected at 21 locations along the north and south shores of Lake Spokane beginning in October 2016 and ending in October 2019. Nitrate plus nitrite concentrations in nearshore groundwater ranged from <0.04 to 7.60 milligrams of nitrogen per liter. Nearshore groundwater orthophosphate concentrations ranged from <0.004 to 0.381 milligrams of phosphorus per liter, and, overall, there were no consistent seasonal differences in nearshore groundwater nutrients during this study. Nitrate plus nitrite concentrations were highest at sites located adjacent to nearshore development and similar to concentrations in water collected from nearby drinking water wells. Similarly, samples from locations adjacent to nearshore development were statistically greater than samples collected from other locations for orthophosphate concentrations. Dissolved boron concentrations, elevated values of which are an indicator of household-detergent use, were elevated in spring and summer at some locations, indicating that residential wastewater was reaching the lake. Stable isotope ratios of nitrate ( 15 N and 18 O), which were used to identify the source nitrate in sampled groundwater, showed that most data indicated a mix of soil nitrogen and nitrogen sources from human or animal waste. Generally, median groundwater discharge to the lake was low across all sites and seasons, with most values smaller than 1 centimeter per day (cm/d). Similar to the nutrient-concentration data, seasonal patterns in seepage flux were weak, and, where there were seasonal increases in flux, the increased groundwater discharge did not carry increased nutrients. Localized estimates of groundwater seepage flux were scaled up to the entire length of the lakeshore. The median groundwater flux of 0.34 cm/d scaled to 1.9 cubic feet per second (ft 3 /s) and the maximum recorded seepage flux of 17.6 cm/d was equivalent to 97 ft 3 /s. These estimates of groundwater inputs are orders of magnitude less than surface water inputs to the lake. Nutrient loads were determined from the product of groundwater flow and a representative nutrient concentration. Using the median seepage flux of 1.9 ft 3 /s, the orthophosphate load ranged from 0.7 to 3.8 pounds of phosphorus per day based on the median and maximum orthophosphate concentrations, respectively. For nitrate plus nitrite, loads ranged from 5.8 to 76.6 pounds of nitrogen per day. Using the maximum value of seepage flux, maximum orthophosphate loads ranged from 35 to 198 pounds of phosphorus per day, and maximum nitrate plus nitrite loads ranged from 296 to 3,943 pound of nitrogen per day. Overall, groundwater nutrient loads are small compared to other sources to the lake. Continued monitoring of future nutrient loads would aid decisions by resource managers as infrastructure within the neighboring residential communities continues to age around Lake Spokane.

Washington↗

USGS2022

Variability in prion protein genotypes by spatial unit to inform susceptibility to chronic wasting disease

Chronic wasting disease (CWD) is a fatal encephalopathy affecting North American cervids. Certain alleles in a host’s prion protein gene are responsible for reduced susceptibility to CWD. We assessed for the first time variability in the prion protein gene of elk ( Cervus canadensis ) present in Pennsylvania, United States of America, a reintroduced population for which CWD cases have never been reported. We sequenced the prion protein gene (PRNP) of 565 elk samples collected over 7 years (2014–2020) and found two polymorphic sites (codon 21 and codon 132). The allele associated with reduced susceptibility to CWD is present in the population, and there was no evidence of deviations from Hardy-Weinberg equilibrium in any of our sampling years ( p -values between 0.14 and 1), consistent with the lack of selective pressure on the PRNP. The less susceptible genotypes were found in a frequency similar to the ones reported for elk populations in the states of Wyoming and South Dakota before CWD was detected. We calculated the proportion of less susceptible genotypes in each hunt zone in Pennsylvania as a proxy for their vulnerability to the establishment of CWD, and interpolated these results to obtain a surface representing expected proportion of the less susceptible genotypes across the area. Based on this analysis, hunt zones located in the southern part of our study area have a low proportion of less susceptible genotypes, which is discouraging for elk persistence in Pennsylvania given that these hunt zones are adjacent to the deer Disease Management Area 3, where CWD has been present since 2014.

Pennsylvania↗

USGS2019

Chronic wasting disease—Research by the U.S. Geological Survey and partners

Introduction Chronic wasting disease (CWD) is the only transmissible spongiform encephalopathy, a class of invariably fatal neurodegenerative mammalian diseases associated with a misfolded cellular prion protein found in wild free-ranging animals. Because it has a long incubation period, affected animals in Cervidae (the deer family; referred to as “cervids”) may not show signs of disease for several years. While signs are not specific to CWD, affected cervids (deer, elk, moose, and reindeer) show changes in appearance (such as progressive weight loss) and changes in behavior such as stumbling, tremors, and teeth grinding. CWD can be transmitted by direct contact or through a contaminated environment. The causative prion agent is highly resistant to degradation. In recent decades, CWD has transitioned from a novel, obscure prion disease of cervids with limited geographical distribution, to a disease that poses substantial ecological, agricultural, and economic risks across large regions of North America. Since its discovery in free-ranging elk and deer populations in the western United States in the 1980s, CWD has been reported in captive or free-ranging cervid populations in 26 States, 3 Canadian Provinces, the Republic of South Korea, Finland, Sweden, and Norway. In addition, the proportion of CWD-infected animals is increasing in many areas where the disease is already established. In some heavily affected areas, total cervid numbers have decreased over time due to CWD, which suggests that these cervid populations may not be sustainable in the long-term. The U.S. Geological Survey (USGS) conducts wildlife disease surveillance and research to support management of CWD-affected species and their habitats. The scientific information is relevant to governmental agencies that manage wildlife and their habitats including the U.S. Fish and Wildlife Service, the National Park Service, the U.S. Department of Agriculture, and other Federal, State, and Tribal agencies as well as conservation partners (non-governmental organizations, businesses, and private landowners). Each project description in this report (1–30) includes the non-USGS collaborators (Federal, State, Tribal agencies, universities) and a USGS point of contact (principal investigator). If there are USGS publications associated with the project, a publication list is provided at the end of each project description.

Alberta, California, Colorado, Idaho, Iowa, Kansas↗

USGS2003

Development, calibration, and analysis of a hydrologic and water-quality model of the Delaware Inland Bays watershed

Excessive nutrients and sediment are among the most significant environmental stressors in the Delaware Inland Bays (Rehoboth, Indian River, and Little Assawoman Bays). Sources of nutrients, sediment, and other contaminants within the Inland Bays watershed include point-source discharges from industries and wastewater-treatment plants, runoff and infiltration to ground water from agricultural fields and poultry operations, effluent from on-site wastewater disposal systems, and atmospheric deposition. To determine the most effective restoration methods for the Inland Bays, it is necessary to understand the relative distribution and contribution of each of the possible sources of nutrients, sediment, and other contaminants. A cooperative study involving the Delaware Department of Natural Resources and Environmental Control, the Delaware Geological Survey, and the U.S. Geological Survey was initiated in 2000 to develop a hydrologic and water-quality model of the Delaware Inland Bays watershed that can be used as a water-resources planning and management tool. The model code Hydrological Simulation Program - FORTRAN (HSPF) was used. The 719-square-kilometer watershed was divided into 45 model segments, and the model was calibrated using streamflow and water-quality data for January 1999 through April 2000 from six U.S. Geological Survey stream-gaging stations within the watershed. Calibration for some parameters was accomplished using PEST, a model-independent parameter estimator. Model parameters were adjusted systematically so that the discrepancies between the simulated values and the corresponding observations were minimized. Modeling results indicate that soil and aquifer permeability, ditching, dominant land-use class, and land-use practices affect the amount of runoff, the mechanism or flow path (surface flow, interflow, or base flow), and the loads of sediment and nutrients. In general, the edge-of-stream total suspended solids yields in the Inland Bays watershed are low in comparison to yields reported for the Eastern Shore from the Chesapeake Bay watershed model. The flatness of the terrain and the low annual surface runoff are important factors in determining the amount of detached sediment from the land that is delivered to streams. The highest total suspended solids yields were found in the southern part of the watershed, associated with high total streamflow and a high surface runoff component, and related to soil and aquifer permeability and land use. Nutrient yields from watershed model segments in the southern part of the Inland Bays watershed were the highest of all calibrated segments, due to high runoff and the substantial amount of available organic fertilizer (animal waste), which results in over-application of organic fertilizer to crops. Time series of simulated hourly total nitrogen concentrations and observed instantaneous values indicate a seasonal pattern, with the lowest values occurring during the summer and the highest during the winter months. Total phosphorus and total suspended solids concentrations are somewhat less seasonal. During storm events, total nitrogen concentrations tend to be diluted and total phosphorus concentrations tend to rise sharply. Nitrogen is transported mainly in the aqueous phase and primarily through ground water, whereas phosphorus is strongly associated with sediment, which washes off during precipitation events.

Water-Resources Investigations Report↗