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At least 469 records · Page 26Linked to original sources
USGS2002

Elevated temperature exacerbates Ichthyophonus infections in buffalo sculpin

High incidences of Ichthyophonus hoferi, a parasite primarily of marine and estuarine fishes, have recently been reported in rockfishes and Pacific herring from the eastern North Pacific (Kent et al 2001, Hershberger et al 2002). Taxonomic position of I. hoferi remains unresolved, but recent phylogenetic studies have grouped the organism with Dermocystidium, Psorospermium, the rosette agent of salmonids, and Rhinosporidium in the Mesomycetozoa, a novel clade of protists near the animal-fungal divergence (Herr et al 1999). Genetic differences among isolates from the east coast of North America indicate that more than one species of Ichthyophonus exist (Rand et al 2000), and different species have likely been assigned the same name based on morphological characteristics. Therefore, hereafter in this manuscript, the organism will be referred to as Ichthyophonus .

Fish Health Newsletter↗
USGS2005

Biology and conservation of Xantus's Murrelet: Discovery, taxonomy and distribution

The biology of Xantus's Murrelets Synthliboramphus hypoleucus is similar in many respects to better-studied Ancient Murrelets S. antiquus, especially regarding morphology and the species' precocial mode of post-hatching development. It nests mainly in rock crevices but also under shrubs on islands in southern California, United States, and northwestern Baja California, Mexico (27 o N to 34 o N). The species was discovered in 1859 by Janos Xantus. Two subspecies ( S. h. hypoleucus and S. h. scrippsi ) are recognized that show limited evidence of interbreeding. At sea, closely related Craveri's Murrelets S. craveri co-occur with Xantus's Murrelets off California and western Baja California during half the year, but the former species has a discrete breeding range in the Gulf of California, Mexico. Breeding was documented at 13 island groups between 1863 and 1976. Post-breeding dispersal as far north as central British Columbia, Canada (c. 52 o N) was observed in the 1940s to 1960s. A few Xantus's Murrelets disperse south of breeding colonies to Magdalena Bay, Baja California (c. 24 o N). The southernmost record is the type specimen collected by Xantus near Cabo San Lucas, Baja California (c. 23 o N). Chief threats to this species include introduced mammalian predators on breeding islands, heightened predation by natural predators in human-modified island habitats, and oil pollution. In January 2005, a Pacific Seabird Group special symposium, "Biology and conservation of the Xantus's Murrelet," highlighted conservation concerns and promoted publication of recent studies of this little-known alcid, with nine symposium papers published in this issue of Marine Ornithology. Much of what we know about Xantus's Murrelets has been learned in recent years, and many aspects of biology remain to be described.

Marine Ornithology: Journal of Seabird Research an↗
USGS2019

Holocene thermokarst lake dynamics in northern Interior Alaska: The interplay of climate, fire, and subsurface hydrology

The current state of permafrost in Alaska and meaningful expectations for its future evolution are informed by long-term perspectives of previous permafrost degradation. Thermokarst processes in permafrost landscapes often lead to widespread lake formation and the spatial and temporal evolution of thermokarst lake landscapes reflects the combined effects of climate, ground conditions, vegetation, and fire. This study provides detailed analyses of thermokarst lake sediments of Holocene age from the southern loess uplands of the Yukon Flats; including bathymetry and sediment core analyses across a water depth transect. The sediment core results, dated by radiocarbon and 210Pb, indicate the onset of finely laminated lacustrine sedimentation between ~10,000 and 9,000 cal yr BP following basin development through inferred thermokarst processes. Thermokarst expansion to modern shoreline configurations continued until ~5000 cal yr BP, which may have been influenced by increased fire. Between ~5000 and 2000 cal yr BP, the preservation of fine laminations at intermediate and deep-water depths indicate higher lake levels than present. At that time, the lake likely overflowed into an over-deepened gully system that is no longer occupied by perennial streams. By ~2000 cal yr BP, massive sedimentation at intermediate water depths indicates that lake levels lowered, which is interpreted to reflect a response to drier conditions based on correspondence with Yukon Flats regional fire and local paleoclimate reconstructions. Consideration of additional contributing mechanisms include the possible influence of catastrophic lake drainages on downgradient base flow levels that may have enhanced subsurface water loss, although this mechanism is untested. The overall consistency between the millennial lake level trends documented here with regional paleoclimate trends indicates that after lakes formed, their size and depth has likely been affected directly by North Pacific atmospheric circulation changes and indirectly through evolution of permafrost, ground ice and sub-surface hydrology. As the first detailed study of Holocene thermokarst basin expansion, stabilization and subsequent climate-driven lake level variations in a loess upland, results provide a framework for future investigations of paleoclimatic signals from similar lake systems that characterize large regions of Alaska and Siberia.

Alaska↗
USGS2019

Seismic velocity structure across the 2013 Craig, Alaska rupture from aftershock tomography: Implications for seismogenic conditions

The 2013 Craig, Alaska M W 7.5 earthquake ruptured along ∼150 km of the Queen Charlotte Fault (QCF), a right-lateral strike-slip plate boundary fault separating the Pacific and North American plates. Regional shear wave analyses suggest that the Craig earthquake rupturepropagated in the northward direction faster than the S-wave (supershear). Theoretical studies suggest that a bimaterial interface, such as that along the QCF, which separates oceanic and continental crust with differing elastic properties, can promote supershear rupture propagation. We deployed short-period ocean-bottom seismometers (OBS) as a part of a rapid-response effort less than four months after the Craig earthquake mainshock. During a 21-day period, 1,133 aftershocks were recorded by 8 OBS instruments. Aftershock spatial distribution indicates that the base of the seismogenic zone along the QCF approaches ∼25 km depth, consistent with a thermally-controlled fault rheology expected for igneous rocks at oceanic transform faults. The spatial distribution also provides supporting evidence for a previously hypothesized active strand of the QCF system within the Pacific Plate. Tomographic traveltime inversion for velocity structure indicates a low-velocity (V P and V S ) zone on the Pacific side of the plate boundary at 5–20 km depths, where NeogenePacific crust and upper mantle seismic velocities average ∼3–11% slower than the North American side, where the Paleozoic North American crust is seismically faster. Our results suggest that elastic properties along the studied portion of the QCF are different than those of a simple oceanic–continental plate boundary fault. In our study region, velocity structure across the QCF, while bimaterial, does not support faster material on the west side of the fault, which has been proposed as one possible explanation for northward supershear propagation during the Craig earthquake. Instead, we image low-velocity material on the west side of the fault. Explanations could include that part of the rupture was subshear, or that fault damage zone properties or fault smoothness are more important controls on supershear rupture than a bimaterial contrast.

Alaska↗
USGS2022

Tree regrowth duration map from LCMAP collection 1.0 land cover products in the conterminous United States, 1985–2017

Forest covers about one-third of the land area of the conterminous United States (CONUS) and plays an important role in offsetting carbon emissions and supporting local economies. Growing interest in forests as relatively cost-effective nature-based climate solutions, particularly restoration and reforestation activities, has increased the demand for information on forest regrowth and recovery following natural and anthropogenic disturbances (e.g., fire, harvest, or thinning). However, a wall-to-wall mapping of the CONUS tree regrowth duration at an annual time interval and 30-m resolution is still challenging. In this study, we utilized the annual land cover products to develop a dataset to quantify forest regrowth duration for CONUS over 1985–2017. The land cover data used to derive the tree regrowth duration map is from the primary land cover product in the U.S. Geological Survey’s Land Change Monitoring, Assessment, and Projection (LCMAP) collection. The LCMAP product used all available Landsat images to detect disturbances over forest and classify Grass/Shrub to Tree Cover transitions on an annual basis. The average regrowth duration was then calculated for each pixel. The regrowth duration map was validated using human interpreted annual reference data that were collected independently. The validation results show one-year of underestimation and 6-year standard deviation of error between the reference data and regrowth duration map. In southeastern CONUS, where major tree regrowth activities have been observed, our map showed higher accuracy with less than one-year bias and 3.6 years standard deviation of error. Forest in the southeast took around 5 years to recover, which was faster than other regions of CONUS. Many pixels had multiple disturbances during the 33-year study period in the region. The spatial pattern of the tree regrowth indicated intense harvesting activities in this region. The Pacific Northwest coast region was the second main area of tree regrowth, but this region often took multiple decades to recover. Given increasing interest in forests as nature-based climate solutions, the tree regrowth duration map can be used to assess reforestation activities as well as forest recovery following natural disturbance and harvesting.

Conterminous United States↗
USGS2012

Tissue loss (white syndrome) in the coral Montipora capitata is a dynamic disease with multiple host responses and potential causes

Tissue loss diseases or white syndromes (WS) are some of the most important coral diseases because they result in significant colony mortality and morbidity, threatening dominant Acroporidae in the Caribbean and Pacific. The causes of WS remain elusive in part because few have examined affected corals at the cellular level. We studied the cellular changes associated with WS over time in a dominant Hawaiian coral, Montipora capitata , and showed that: (i) WS has rapidly progressing (acute) phases mainly associated with ciliates or slowly progressing (chronic) phases mainly associated with helminths or chimeric parasites; (ii) these phases interchanged and waxed and waned; (iii) WS could be a systemic disease associated with chimeric parasitism or a localized disease associated with helminths or ciliates; (iv) corals responded to ciliates mainly with necrosis and to helminths or chimeric parasites with wound repair; (v) mixed infections were uncommon; and (vi) other than cyanobacteria, prokaryotes associated with cell death were not seen. Recognizing potential agents associated with disease at the cellular level and the host response to those agents offers a logical deductive rationale to further explore the role of such agents in the pathogenesis of WS in M. capitata and helps explain manifestation of gross lesions. This approach has broad applicability to the study of the pathogenesis of coral diseases in the field and under experimental settings.

Proceedings of the Royal Society B: Biological Sci↗
USGS2011

Global seabird responses to forage fish depletion - One-third for the birds

Determining the form of key predator-prey relationships is critical for understanding marine ecosystem dynamics. Using a comprehensive global database, we quantified the effect of fluctuations in food abundance on seabird breeding success. We identified a threshold in prey (fish and krill, termed “forage fish”) abundance below which seabirds experience consistently reduced and more variable productivity. This response was common to all seven ecosystems and 14 bird species examined within the Atlantic, Pacific, and Southern Oceans. The threshold approximated one-third of the maximum prey biomass observed in long-term studies. This provides an indicator of the minimal forage fish biomass needed to sustain seabird productivity over the long term.

Science↗
USGS2020

Morphology, structure, and kinematics of the San Clemente and Catalina faults based on high-resolution marine geophysical data, southern California Inner Continental Borderland

Catalina Basin, located within the southern California Inner Continental Borderland (ICB), is traversed by two active submerged fault systems that are part of the broader North America-Pacific plate boundary: the San Clemente fault (along with a prominent splay, the Kimki fault) and the Catalina fault. Previous studies have suggested that the San Clemente fault (SCF) may be accommodating up to half of the approximately 8 mm/yr right-lateral slip distributed across the ICB between San Clemente Island and the mainland coast, and that the Catalina fault (CF) acts as a significant restraining bend in the larger transform system. Here, we provide new high-resolution geophysical constraints on the seabed morphology, deformation history, and kinematics of the active faults in and on the margins of Catalina Basin. We significantly revise SCF mapping and describe a discrete releasing bend that corresponds with lows in gravity and magnetic anomalies, as well as a connection between the SCF and the Santa Cruz fault to the north. Subsurface seismic-reflection data show evidence for a vertical SCF with significant lateral offsets, while the CF exhibits lesser cumulative deformation with a vertical component indicated by folding adjacent to the CF. Geodetic data are consistent with SCF right-lateral slip rates as high as ~3.6 mm/yr and transpressional convergence of <1.5 mm/yr accommodated along the CF. The Quaternary strands of the SCF and CF consistently cut across Miocene and Pliocene structures, suggesting generation of basin and ridge morphology in a previous tectonic environment that has been overprinted by Quaternary transpression. Some inherited crustal fabrics, especially thinned crust and localized, relatively hard crustal blocks, appear to have had a strong influence on the geometry of the main trace of the SCF, whereas inherited faults and other structures (e.g., the Catalina Ridge) appear to have minimal influence on the geometry of active faults in the ICB.

California↗
USGS2025

Population genomics of Aedes albopictus across remote Pacific islands for genetic biocontrol considerations

Remote Pacific islands (RPI) are characterized by ecological isolation, diverse endemic species, and vulnerability to invasive organisms due to globalization-driven connectivity. Among these species, Aedes albopictus , a highly invasive vector of flaviviruses, has spread extensively across the RPI via human-mediated dispersal, posing significant health and economic burdens. While the population structure and the degree of gene flow between mosquito populations can inform the dispersal pathways critical for disease vector management, the population genetics of Ae. albopictus in Northern RPI remains understudied. The present work investigated the population structure and connectivity of Ae. albopictus populations from Guam, Hawaiian Islands, and the Republic of the Marshall Islands (RMI) to inform disease and vector-based biosecurity risks and develop targeted management strategies. This is the first assessment to develop and analyze whole genome sequences of Ae. albopictus for RPI, enabling more accurate estimates of differentiation, admixture, and ancestry. We found distinct genetic clustering between regions, distinct ancestry of populations across RPI, and potential invasions that originated from Hawaii and spread into the RMI, and invasions from North America that spread to Guam. These findings can inform biosecurity protocols to limit the invasion of Ae. albopictus and their associated diseases within Hawaii and around the Pacific. Given the significant degree of genetic differentiation, we found between islets, islands, and regions, the genome data from this study can be used to enable the development of locally confined geographically isolated gene drives. These drives may be used to prevent and control outbreaks of dengue, chikungunya, and Zika, diseases that have had devastating consequences in these remote island communities.

PLoS Neglected Tropical Diseases↗
USGS2013

Residency times and patterns of movement of postbreeding dunlin on a subarctic staging area in Alaska

Understanding how individuals use key resources is critical for effective conservation of a population. The Yukon-Kuskokwim Delta (YKD) in western Alaska is the most important postbreeding staging area for shorebirds in the subarctic North Pacific, yet little is known about movements of shorebirds there during the postbreeding period. To address this information gap, we studied residency times and patterns of movement of 17 adult and 17 juvenile radio-marked Dunlin (Calidris alpina) on the YKD between early August and early October 2005. Throughout this postbreeding period, during which Dunlin were molting, most birds were relocated within a 130 km radius of their capture site on the YKD, but three birds were relocated more than 600 km to the south at estuaries along the Alaska Peninsula. On average, juvenile Dunlin were relocated farther away from the banding site (median relocation distance = 36.3 km) than adult Dunlin (median relocation distance = 8.8 km). Post-capture, minimum lengths of stay by Dunlin on the YKD were not significantly different between juveniles (median = 19 days) and adults (median = 23 days), with some birds staging for more than 50 days. Body mass at time of capture was the best single variable explaining length of stay on the YKD, with average length of stay decreasing by 2.5 days per additional gram of body mass at time of capture. Conservation efforts for postbreeding shorebirds should consider patterns of resource use that may differ not only by age cohort but also by individual condition.

Alaska↗
USGS1981

The freshwater‐inflow‐to‐estuaries issue

Over 55% of the United States commercial fish and shellfish catch is dependent upon estuaries for spawning and nursery functions, but estuaries cannot function ecologically without an adequate supply, seasonal inflow, and quality of freshwater from inland rivers. Such inland river development projects as constructing reservoirs, leveeing rivers, dredging navigation channels, and diverting water for agriculture, cities, and industry have drastically changed freshwater inflows to many estuaries on the Atlantic and Pacific coasts and the Gulf of Mexico. The problems on the Atlantic coast are primarily reduced water quality and increased rate of runoff although reductions in quantity appear to be developing. On the Gulf of Mexico decreases in freshwater inflow quantity have reduced estuarine production on the Florida and Texas coasts. On the highly productive Mississippi Delta, levee and navigation channel construction has diverted river inflow to the Gulf of Mexico rather than allowing overflow to the estuarine habitats; this has resulted in saltwater intrusion and marsh erosion. On the Pacific coast, inflow to the San Francisco Bay complex has been reduced by over 50%, resulting in drastic estuarine changes. Studies on freshwater inflow are underway in Chesapeake Bay, Louisiana, Texas, and the San Francisco Bay complex. The freshwater‐inflow‐to‐estuary problem can be addressed by (1) considering the ecological effects of proposed inland water projects on estuarine production and communities; (2) developing nationwide criteria for evaluating the freshwater needs of estuaries; (3) refining methods for defining the economic and noneconomic benefit of freshwater inflow to estuaries; and (4) using existing laws and directives more effectively.

Fisheries↗
USGS2008

Variations in Community Exposure and Sensitivity to Tsunami Hazards on the Open-Ocean and Strait of Juan de Fuca Coasts of Washington

Evidence of past events and modeling of potential future events suggest that tsunamis are significant threats to communities on the open-ocean and Strait of Juan de Fuca coasts of Washington. Although potential tsunami-inundation zones from a Cascadia Subduction Zone (CSZ) earthquake have been delineated, the amount and type of human development in tsunami-prone areas have not been documented. A vulnerability assessment using geographic-information-system tools was conducted to document variations in developed land, human populations, economic assets, and critical facilities relative to CSZ-related tsunami-inundation zones among communities on the open-ocean and Strait of Juan de Fuca coasts of Washington (including Clallam, Jefferson, Grays Harbor, and Pacific Counties). The tsunami-inundation zone in these counties contains 42,972 residents (24 percent of the total study-area population), 24,934 employees (33 percent of the total labor force), and 17,029 daily visitors to coastal Washington State Parks. The tsunami-inundation zone also contains 2,908 businesses that generate $4.6 billion in annual sales volume (31 and 40 percent of study-area totals, respectively) and tax parcels with a combined total value of $4.5 billion (25 percent of the study-area total). Although occupancy values are not known for each site, the tsunami-inundation zone also contains numerous dependent-population facilities (for example, schools and child-day-care centers), public venues (for example, religious organizations), and critical facilities (for example, police stations and public-work facilities). Racial diversity of residents in tsunami-prone areas is low?89 percent of residents are White and 8 percent are American Indian or Alaska Native. Nineteen percent of the residents in the tsunami-inundation zone are over 65 years in age, 30 percent of the residents live on unincorporated county lands, and 35 percent of the households are renter occupied. Employees in the tsunami-inundation zone are largely in businesses related to health care and social assistance, accommodation and food services, and retail trade, reflecting businesses that cater to a growing retiree and tourist population. Community vulnerability, described here by exposure (the amount of assets in tsunami-prone areas) and sensitivity (the relative percentage of assets in tsunami-prone areas) varies among 13 incorporated cities, 7 Indian reservations, and 4 counties. The City of Aberdeen has the highest relative community exposure to tsunamis, whereas the City of Long Beach has the highest relative community sensitivity. Levels of community exposure and sensitivity to tsunamis are found to be related to the amount and percentage, respectively, of a community?s land that is in a tsunami-inundation zone. This report will further the dialogue on societal risk to tsunami hazards in Washington and help risk managers to determine where additional risk-reduction strategies may be needed.

Scientific Investigations Report↗
USGS2015

Survival and growth of invasive Indo-Pacific lionfish at low salinities

Invasive Indo-Pacific lionfish [ Pterois volitans (Linnaeus, 1758) and P. miles (Bennett, 1828)] are now established throughout the Western North Atlantic. Several studies have documented negative effects of lionfish on marine fauna including significant changes to reef fish community composition. Established populations of lionfish have been documented in several estuaries, and there is concern that the species may invade other low-salinity environments where they could potentially affect native fauna. To gain a better understanding of their low-salinity tolerance, we exposed lionfish to four salinities [5, 10, 20 and 34 (control)]. No lionfish mortality was observed at salinities of 34, 20 or 10, but all fish died at salinity = 5 within 12 days. Lionfish survived for at least a month at a salinity of 10 and an average of about a week at 5. Fish started the experiment at an average mass of 127.9 g, which increased at a rate of 0.55 g per day while they were alive, regardless of salinity treatment. Our research indicated lionfish can survive salinities down to 5 for short periods and thus may penetrate and persist in a variety of estuarine habitats. Further study is needed on effects of salinity levels on early life stages (eggs, larvae).

Aquatic Invasions↗
USGS2020

Valuing tourism to a historic World War II national memorial

This study contributes to the existing literature on valuing visitation to an important cultural heritage site. Pearl Harbor National Memorial in Hawaii remembers and honors those that served the United States in the Pacific battles of World War II. Although historic and cultural monuments and memorials comprise a substantial portion of the U.S. National Park System, there is little research into the economic benefits such sites provide to visitors. These benefits are a critical component of planning and management decisions based on an economic efficiency criterion. This study contributes to the literature by quantifying the economic value derived from visitation to Pearl Harbor National Memorial, home of the USS Arizona Memorial. Using data from a recent visitor survey, we explore the motivations for visiting the site and how such motivations may influence these values. These findings have significant implications, demonstrating a substantial return on the public's investment in a unique historic site and recent investments in maintaining the site for safety and an enhanced visitor experience.

Hawaii↗
USGS2025

Wake Atoll: Evaluation of plant biosecurity

Introduced organisms can cause substantial effects across most landscapes. Island ecosystems, especially tropical islands, are at elevated risk from introduced organisms. The risks are even higher for tropical islands with moderate or high levels of transit, yet this can be minimized by application of appropriate biosecurity requirements. In this study, we examined the potential for non-native plant species introductions, especially invasive plants, via shipping containers to be transported to Wake Atoll, one of the most remote terrestrial land masses in the Pacific Ocean. We sowed debris collected from 30 shipping containers in a greenhouse experiment to determine if any live plants could be germinated, identify any species that germinated, and ascertain if they posed a threat if they were to be transported to Wake Atoll and became established there. During this study 23 plant species were identified, including ferns, monocots, and dicots. Fifteen of these species reached reproductive maturity over the course of seven months. From previous plant surveys on the atoll, we know that 13 of the 23 identified species were not previously recorded, and four species are already known to be invasive on Wake Atoll. This study provides insight into the potential for debris found in shipping containers to contribute to the spread of non-native, possibly invasive species. This information may help with the refinement of biosecurity strategies to prevent the accidental introduction of invasive species into sensitive natural areas such as Wake Atoll.

Hawaii Cooperative Studies Unit Technical Report↗
USGS2024

Variability in coastal habitat available for Longfin Smelt Spirinchus thaleichthys in the northeastern Pacific Ocean

An understanding of oceanographic conditions and processes important to marine animal ecology is fundamental to the development of effective management and conservation actions. Longfin Smelt ( Spirinchus thaleichthys ) is a pelagic forage fish found in coastal and estuarine waters along the Pacific coast of North America from Alaska to central California. Substantial population declines in California’s San Francisco Estuary, where Longfin Smelt are protected under California’s Endangered Species Act, have prompted extensive study of estuarine factors associated with the decline. However, coastal factors that affect up to two-thirds of the Longfin Smelt life cycle are poorly understood and may be important drivers of population dynamics. We compiled coastal observations from numerous sources to estimate the range-wide coastal marine distribution of Longfin Smelt and assess habitat factors affecting distribution in the northeast Pacific Ocean. Based on maximum entropy species distribution models, Longfin Smelt distribution was correlated with depth, distance from the nearest estuary, sea surface temperature, and sea surface chlorophyll. Longfin Smelt were found in shallow, higher productivity coastal waters closer to estuaries, with depth and temperature the most consistent factors influencing distribution. Habitat suitability was highly variable at the southern extent of the range, particularly off the California coast, and was largely driven by habitat contractions associated with warm-water conditions. Study results provide insights into the habitat and range-wide distribution of an at-risk estuarine-reliant forage fish and are the first step toward identifying processes that affect the marine portion of the Longfin Smelt life cycle.

Frontiers in Marine Science↗
USGS2013

The National assessment of shoreline change—A GIS compilation of vector shorelines and associated shoreline change data for the Pacific Northwest coast

Sandy ocean beaches are a popular recreational destination and are often surrounded by communities that consist of valuable real estate. Development along sandy coastal areas is increasing despite the fact that coastal infrastructure may be repeatedly subjected to flooding and erosion. As a result, the demand for accurate information regarding past and present shoreline changes is increasing. Investigators with the U.S. Geological Survey's National Assessment of Shoreline Change Project have compiled a comprehensive database of digital vector shorelines and rates of shoreline change for the Pacific Northwest coast including the states of Washington and Oregon. No widely accepted standard for analyzing shoreline change currently exists. Current measurement and methods for calculating rates of change vary from study to study, precluding the combination of study results into statewide or regional assessments. The impetus behind the national assessment was to develop a standardized method that is consistent from coast to coast for measuring changes in shoreline position. The goal was to facilitate the process of periodically and systematically updating the measurements in an internally consistent manner. A detailed report on shoreline change for the Pacific Northwest coast that contains a discussion of the data presented here is available and cited in the Geospatial Data section of this report.

Oregon, Washington↗