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Use of miniroutes and Breeding Bird Survey data to estimate abundance

1. Information on relative abundance is easily obtained and adds greatly to the value of an atlas project. 2. The Breeding Bird Survey (BBS) provides annual counts (birds per 50 roadside stops) that can be used to: (1) map relative abundance by physiographic region within a state or province, (2) map relative abundance on a more local scale by using results from individual routes, or (3) compute estimates of total state populations of a species. Where BBS coverage is too scanty to permit mapping, extra temporary routes may be established to provide additional information for the atlas. Or, if continuing coverage is anticipated, additional permanent random routes can be assigned by the U. S. Fish and Wildlife Service. 3. Miniroutes of 15 or more stops can be established in individual atlas blocks to serve the dual purposes of providing efficient uniform coverage and providing information on relative abundance. Miniroutes can also be extracted from BBS routes to supplement special atlas coverage, or vice versa; but the data from the BBS will not be confined to individual atlas blocks. 4. Advantages of 15- or 20-stop Miniroutes over 25-stop Miniroutes are several: the ability to do two per morning and the lower variability among M1niroute results. Also, many 5-km atlas blocks do not have enough secondary roads to accommodate 25 stops at one-half mile intervals. Disadvantages of 15-stop Miniroutes starting at sunrise are the smaller numbers of birds recorded, missing of the very productive dawn chorus period (Robbins 1981), and missing crepuscular species (rails, woodcock, owls, and goatsuckers). 5. Advantages of recording counts of individuals rather than checking only species presence at Miniroute stops are that: (1) relative abundance can be mapped rather than frequency only (a measure of frequency is already available in the number of blocks recording each species); (2) population change can be measured over a period of years when the next atlas is made; and (3) comparative abundance data are available for habitat correlations and other statistical applications (Luis et ale 1983). Disadvantages of recording counts are that: (1) many observers do not feel they can make accurate counts of individuals; and (2) a few species may be missed while observers are counting (an hypothesis that will be field-tested this summer). While counts of individuals may be more subject to observer differences than are frequency counts, both the numbers of birds and their frequencies are available when birds are counted. 6. Roadside counts produce slightly larger samples and more species than off-road counts. The main advantage of off-road coverage is to sample habitats that cannot be sampled from roadsides. 7. Miniroutes can be recommended to individual atlasers as an efficient means of detecting species and upgrading them from Possible to Probable, even when there is no statewide Miniroute program.

Book chapter

Population and habitat assessment: Monitoring bird populations over large areas: Introduction

Monitoring provides essential information about status and change in bird populations. For Neotropical Migrant Birds (NTMBs), the North American Breeding Bird Survey (BBS) has been particularly influential in documenting regional population change and often is cited as justification for management actions. However, as with most bird surveys, the design of the BBS, and the geographic scale of the information, often limits its use either in evaluating the response of bird populations to management, or in identifying causes of population change.

Book chapter

Some consequences of using counts of birds banded as indices to populations

In mist-net studies, it is often difficult to use capture-recapture methods to estimate number of birds present. Many investigators use number of birds captured as an index of population size. We investigate the consequences of using indices of bird abundance as surrogates for population size in hypothesis tests. Unless all of the birds present are captured, indices are biased estimates of local population size, and the amount of bias depends on the proportion of birds captured. We demonstrate the potential effects of bias on hypothesis tests based on indices. The bias generally causes type I error rates to be inflated. Investigators should either estimate the proportion of animals captured using capture-recapture methods or demonstrate that results of hypothesis tests based on indices are not consequences of bias in the indices.

Book chapter

Modeling seasonal interactions in the population dynamics of migratory birds

Understanding the population dynamics of migratory birds requires understanding the relevant biological events that occur during breeding, migratory, and overwintering periods. The few available population models for passerine birds focus on breeding-season events, disregard or oversimplify events during nonbreeding periods, and ignore interactions that occur between periods of the annual cycle. Identifying and explicitly incorporating seasonal interactions into population models for migratory birds could provide important insights about when population limitation actually occurs in the annual cycle. We present a population model for the annual cycle of a migratory bird, based on the American Redstart (Setophaga ruticilla) but more generally applicable, that examines the importance of seasonal interactions by incorporating: (1) density dependence during the breeding and winter seasons, (2) a carry-over effect of winter habitat on breeding-season productivity, and (3) the effects of behavioral dominance on seasonal and habitat specific demographic rates. First, we show that habitat availability on both the wintering and breeding grounds can strongly affect equilibrium population size and sex ratio. Second, sex ratio dynamics, as mediated by behavioral dominance, can affect all other aspects of population dynamics. Third, carry-over effects can be strong, especially when winter events are limiting. These results suggest that understanding the population dynamics of migratory birds may require more consideration of the seasonal interactions induced by carry-over effects and density dependence in multiple seasons. This model provides a framework in which to explore more fully these seasonal dynamics and a context for estimation of life history parameters.

Book chapter

Predicting bird response to alternative management scenarios on a ranch in Campeche, Mexico

We developed models to predict the potential response of wintering Neotropical migrant and resident bird species to alternative management scenarios, using data from point counts of birds along with habitat variables measured or estimated from remotely sensed data in a Geographic Information System. Expected numbers of occurrences at points were calculated for 100 species of birds, under current habitat conditions and under habitat conditions that would result from seven alternative management scenarios for Rancho Sandoval, a cattle ranch and private nature reserve in Campeche, Mexico. Most bird species of conservation concern would benefit from management scenarios that increase the amount of forest, but the highest priority resident species would not. To balance the somewhat conflicting habitat needs of these species and the concerns of ranch managers, we recommend that forest area and connectivity be increased, and pastures be maintained but more efficiently managed to support cattle and the priority resident and migrant birds that require open habitats.

Book chapter

North American Bird Banding and quantitative population ecology

Early bird-banding programs in North America were developed to provide descriptions of bird migration and movement patterns. This initial interest in description quickly evolved into more quantitative interests in two ways. There was (1) interest in quantifying migration and movement patterns, and (2) rapid recognition that re-observations of marked birds provided information about other parameters relevant to population dynamics. These included survival rate, recruitment rate, and population size. The evolution of methods for estimating population size, survival, recruitment, and movement is reviewed and we show it to be closely tied to bird-banding data. These estimation methods have been used with bird-banding data to draw important inferences about evolutionary ecology, population ecology, and population management. Illustrative examples of such inferences are provided.

Book chapter

Birds and environmental contaminants in San Francisco and Chesapeake Bays

The direct and indirect effects of human activities, including environmental contamination, upon bird populations in San Francisco Bay and Chesapeake Bay are imperfectly understood, and few data are available. that allow a comparison of the contamination levels in birds from these two areas. Certain trace elements and organochlorine compounds have been found at sufficiently high concentrations in bird tissues or their foods to expect adverse effects in these birds, based upon results of field and laboratory studies conducted with other avian species. The decline and recovery of populations of many avian species have been recorded, including some associated with organochlorine contamination. The present paper summarizes available information on the occurrence and potential effects of contaminants upon birds in these two regions.

Marine Pollution Bulletin

Bird use of agricultural fields under reduced and conventional tillage in the Texas Panhandle

We conducted bird surveys in reduced-tillage and conventional tillage fields in spring, summer, fall, and winter from 1987 to 1991 in the Texas Panhandle. Eastern meadowlarks, longspurs, and savannah sparrows were more common in reduced-tillage (sorghum and wheat stubble) fields than in conventionally tilled (plowed) fields in at least 1 season. Other species also had patterns suggestive of greater abundance in reduced-tillage fields. Hornedlarks, which prefer habitat with sparse vegetation, were more abundant in plowed fields in all seasons except summer. Bird diversity was greater in reduced-tillage fields than in conventionally tilled fields in summer. Cover density and height were greater in reduced tillage fields in all seasons except spring. Cover density and height rather than cover composition (e.g.,grain stubble or live plants) seemed to be the important factors affecting bird distribution. Patterns of bird abundance between sorghum and wheat stubble fields also were dependent on cover. Herbicide use was not greater in reduced-tillage fields than in conventionally tilled fields. Reduced-tillage agriculture for sorghum and wheat farming should be encouraged in the southern Great Plains as a means of improving the attractiveness of agricultural land to many bird species.

Wildlife Society Bulletin

The North American Bird Banding Program: Into the 21st century

The authors examined the legal, scientific, and philosophical underpinnings of the North American Bird Banding Program [BBP], with emphasis on the U.S. Bird Banding Laboratory [BBL], but also considering the Canadian Bird Banding Office [BBO]. In this report, we review the value of banding data, enumerate and expand on tile principles under which any modern BBP should operate, and from them derive our recommendations. These are cast into a Mission Statement, a Role and Function Statement, and a series of specific recommendations addressing five areas: (1) permitting procedures and practices; (2) operational issues; (3) data management; (4) BBL organization and staffing; and (5) implementation. Our major tenets and recommendations are as follows: banding provides valuable data for numerous scientific, management, and educational purposes, and its benefits far outweigh necessary biological and fiscal costs, especially those incurred by the BBL and BBO; because of the value of banding data for management of avian resources, including both game and nongame birds, government support of the program is fully justified and appropriate; all banding data, if collected to appropriate standards, are potentially valuable; there are many ways to increase the value of banding data such as by endorsing, promoting, and applying competence and/or training standards for permit issuance; promoting bander participation in well-designed projects; and by encouraging the use of banding data for meta-analytical approaches; the BBL should apply, promote, and encourage such standards, participation, and approaches; the BBP should be driven by the needs of users, including scientists and managers; all exchange of data and most communication between banders and the BBL should become electronic in the near future; the computer system at the BBL should be modernized to one designed for a true client-server relationship and storage of data in on-line relational databases; the BBL should continue to maintain high quality control and editing standards and should strive to bring all data in the database up to current standards; however, the BBL should transfer a major portion of the responsibility for editing banding data to the bander by providing software that will permit the bander to edit his/her own data electronically before submission to the BBL; the BBL should build the capacity to store additional data tied to original band records able to be pre-edited and submitted electronically, such as recapture data, appropriate data from auxiliary marking (e.g. resightings of color-marked birds), and other data that gain value when pooled from many banders (e.g., measurements); however, the BBL should only accept such data if they are collected using standardized methods and as part of an established program designed to utilize such data; now is the time to consider options for implementing a Western Hemisphere banding program, with leadership from the BBL; the Patuxent Electronic Data Processing Section should become part of the BBL; additional scientific and technical staff must be added to the BBL; an Implementation Team should be formed to expedite our recommendations, following timetables outlined in this document.

Journal of Field Ornithology

Predicting regional abundance of rare grassland birds with a hierarchical spatial count model

Grassland birds are among the most imperiled groups of birds in North America. Unfortunately, little is known about the location of regional concentrations of these birds, thus regional or statewide conservation efforts may be inappropriately applied, reducing their effectiveness. We identified environmental covariates associated with the abundance of five grassland birds in the upper midwestern United States (Bobolink [Dolichonyx oryzivorus], Grasshopper Sparrow [Ammodramus savannarum], Henslow's Sparrow [A. henslowii], Sedge Wren [Cistothorus platensis], and Upland Sandpiper [Bartramia longicauda]) with a hierarchical spatial count model fitted with Markov chain Monte Carlo methods. Markov chain Monte Carlo methods are well suited to this task because they are able to incorporate effects associated with autocorrelated counts and nuisance effects associated with years and observers, and the resulting models can be used to map predicted abundance at a landscape scale. Environmental covariates were derived from five suites of variables: landscape composition, landscape configuration, terrain heterogeneity and physiognomy, climate, and human influence. The final models largely conformed to our a priori expectations. Bobolinks and Henslow's Sparrows were strongly sensitive to grassland patch area. All of the species except Henslow's Sparrows exhibited substantial negative relations with forest composition, often at multiple spatial scales. Climate was found to be important for all species, and was the most important factor influencing abundance of Grasshopper Sparrows. After mapping predicted abundance, we found no obvious correspondence in the regional patterns of the five species. Thus, no clearly defined areas exist within the upper midwestern United States where management plans can be developed for a whole suite of grassland birds. Instead, a larger, region-wide initiative setting different goals for different species is recommended.

Condor

Birds and polycyclic aromatic hydrocarbons

Polycyclic aromatic hydrocarbons (PAH) are present throughout the global environment and are produced naturally and by activities of humans. Effects of PAH on birds have been determined by studies employing egg injection, egg immersion, egg shell application, single and multiple oral doses, subcutaneous injection, and chemical analysis of field-collected eggs and tissue. The four-to six-ring aromatic compounds are the most toxic to embryos, young birds, and adult birds. For embryos, effects include death, developmental abnormalities, and a variety of cellular and biochemical responses. For adult and young birds, effects include reduced egg production and hatching, increased clutch or brood abandonment, reduced growth, increased organweights, and a variety of biochemical responses. Trophic level accumulation is unlikely. Environmental exposure to PAH in areas of high human population or habitats affected by recent petroleum spills might be sufficient to adversely affect reproduction. Evidence of long-term effects of elevated concentrations of environmental PAH on bird populations is very limited and the mechanisms of effect are unclear.

Avian and Poultry Biology Reviews

Using a novel micro-sampling technique to monitor the effects of methylmercury on the eggs of wild birds

Methylmercury is the predominant chemical form of mercury reported in the eggs of wild birds. The embryo is the life stage at which birds are most sensitive to methylmercury. Protective guidelines have been based largely on captive-breeding studies done with chickens (Gallus domesticus), mallards (Anas platyrhynchos), and ring-necked pheasants (Phasianus colchicus). Typically these studies are cost and time prohibitive. In the past, researchers have used either egg injections or the ?sample egg? technique to determine contaminant effects on bird eggs. Both techniques have their limitations. As an alternative to the above methods and because most of the methylmercury is found in the albumen we have developed a novel, less invasive technique, to micro-sample the albumen of eggs in the field. An albumen sample would be analyzed and then compared to the hatching success of that egg. Using the micro-sampling procedure, the egg is oriented with the blunt end up and the pointed end down. A vent hole is drilled at the top to relieve pressure. Approximately one third up from the bottom, a withdrawal site is drilled just until the inner shell membrane is exposed. A syringe with a 21 or 18 gauge needle is gently inserted just into the egg and approximately 200?300?l of albumen is removed. Almost concurrently this site and then the vent are sealed. Thus far we have experimented with both chicken and mallard eggs in the laboratory. We sampled chicken eggs at days 0 and 3 of incubation with a hatching success of 76% and 70%, respectively. Neither group was significantly different from control eggs (P=0.52, 0.54). Field studies are in progress using this technique in which birds are allowed to incubate their own eggs. We envision micro-sampling to be a tool that researchers and managers could use in the field to determine the effects of mercury or other contaminants in bird populations. Micro-sampling would reduce the impact on the sampled population and could be used to monitor sensitive species without impacting reproduction and recruitment.

Proceedings of the Annual Conference of the Southe

Bridging the conservation design and delivery gap for wetland bird habitat maintenance and restoration in the Midwestern United States

The U.S. Fish and Wildlife Service's adoption of Strategic Habitat Conservation is intended to increase the effectiveness and efficiency of conservation delivery by targeting effort in areas where biological benefits are greatest. Conservation funding has not often been allocated in accordance with explicit biological endpoints, and the gap between conservation design (the identification of conservation priority areas) and delivery needs to be bridged to better meet conservation goals for multiple species and landscapes. We introduce a regional prioritization scheme for North American Wetlands Conservation Act funding which explicitly addresses Midwest regional goals for wetland-dependent birds. We developed decision-support maps to guide conservation of breeding and non-breeding wetland bird habitat. This exercise suggested ~55% of the Midwest consists of potential wetland bird habitat, and areas suited for maintenance (protection) were distinguished from those most suited to restoration. Areas with greater maintenance focus were identified for central Minnesota, southeastern Wisconsin, the Upper Mississippi and Illinois rivers, and the shore of western Lake Erie and Saginaw Bay. The shores of Lakes Michigan and Superior accommodated fewer waterbird species overall, but were also important for wetland bird habitat maintenance. Abundant areas suited for wetland restoration occurred in agricultural regions of central Illinois, western Iowa, and northern Indiana and Ohio. Use of this prioritization scheme can increase effectiveness, efficiency, transparency, and credibility to land and water conservation efforts for wetland birds in the Midwestern United States.

Midwest

Comparative habitat use in a juniper woodland bird community

We compared vegetation structure used by 14 bird species during the 1998 and 1999 breeding seasons to determine what habitat features best accounted for habitat division and community organization in Utah juniper (Juniperus osteosperma) woodlands of southwestern Wyoming. Habitat use was quantified by measuring 24 habitat variables in 461 bird-centered quadrats, each 0.04 ha in size. Using discriminant function analysis, we differentiated between habitat used by 14 bird species along 3 habitat dimensions: (1) variation in shrub cover, overstory juniper cover, mature tree density, understory height, and decadent tree density; (2) a gradient composed of elevation and forb cover; and (3) variation in grass cover, tree height, seedling/sapling cover, and bare ground/rock cover. Of 14 species considered, 9 exhibited substantial habitat partitioning: Mourning Dove (Zenaida macroura), Bewick's Wren (Thryomanes bewickii), Blue-gray Gnatcatcher (Polioptila caerulea), Mountain Bluebird (Sialia currucoides), Plumbeous Vireo (Vireo plumbeus), Green-tailed Towhee (Pipilo chlorurus), Brewer's Sparrow (Spizella breweri), Dark-eyed Junco (Junco hyemalis), and Cassin's Finch (Carpodacus cassinii). Our results indicate juniper bird communities of southwestern Wyoming are organized along a 3-dimensional habitat gradient composed of woodland maturity, elevation, and juniper recruitment. Because juniper birds partition habitat along successional and altitudinal gradients, indiscriminate woodland clearing as well as continued fire suppression will alter species composition. Restoration efforts should ensure that all successional stages of juniper woodland are present on the landscape.

Western North American Naturalist

Composition of breeding bird communities in Gulf Coast Chenier Plain marshes: Effects of winter burning

Marsh managers along the Gulf Coast Chenier Plain frequently use winter burns to alter marsh vegetation and improve habitat quality for wintering waterfowl. However, effects of these burns on marsh avifauna are not well documented. We recorded abundances of breeding bird species and vegetation structure in burned and unburned control marshes during one breeding season before (1996) and two breeding seasons after (1997, 1998) experimental winter burns. We used non-metric multidimensional scaling analysis to assess the extent and direction of changes in bird community compositions of burned and unburned control marshes and to investigate the influence of vegetation structure on bird community composition. Overall, we found that Seaside Sparrows (Emberizidae: Ammodramus maritimus [Wilson]) and Red-winged Blackbirds and Boat-tailed Grackles (Icteridae: Agelaius phoeniceus [L.] and Quiscalus major Vieillot, respectively) comprised > 85% of observed birds. In burned marshes during the first breeding season following experimental burns (1997), icterid abundance increased while Seaside Sparrow abundance decreased relative to pre-burn (1996) conditions. This pattern was reversed during the second breeding season post-burn. No obvious patterns of change in avian abundance were detected in unburned control marshes over the 3-year period. Qualitative changes in breeding bird community composition were related to effects of winter burning on percent cover of dead vegetation and Spartina patens (Aiton) Muhl.

Southeastern Naturalist

Radar analysis of fall bird migration stopover sites in the Northeastern U.S.

The national network of weather surveillance radars (WSR-88D/NEXRAD) detects birds in flight, and has proven to be a useful remote-sensing tool for ornithological study. We used data collected during Fall 2008 and 2009 by 16 WSR-88D and 3 terminal Doppler weather radars in the northeastern U.S. (U.S. Fish and Wildlife Service Region 5) to study the spatial distribution of landbirds shortly after they leave daytime stopover sites to embark on nocturnal migratory flights. The aerial density of birds, as estimated by radar reflectivity, was georeferenced to the approximate locations on the ground from which birds emerged. We classified bird stopover use by the magnitude and variation of radar reflectivity across nights; areas were considered ‘important’ stopover sites from a conservation perspective if relative bird density was consistently or occasionally high. These results were used to develop models to predict potentially important stopover sites in portions of the region not sampled by the radars, based on land cover, ground elevation, and geographic location. Locally important stopover sites generally were associated with deciduous forests embedded within landscapes dominated by developed or agricultural lands, or near the shores of major water bodies. Large areas of regionally important stopover sites were located along the coastlines of Long Island Sound, throughout the Delmarva Peninsula, in areas surrounding Baltimore and Washington, along the western edge of the Adirondack Mountains, and within the Appalachian Mountains of southwestern Virginia and West Virginia. Important stopover sites, both within and outside radar-sampled areas and on 34 national wildlife refuges sampled by the radars, were mapped in a Geographic Information System, providing base maps for conservation uses and a sampling frame for field surveys to ‘ground truth’ the radar and analytical results. Our analysis indicates that preserving patches of natural habitat, particularly deciduous forests, in developed or agricultural landscapes and along major coastlines should be a priority for conservation plans addressing the stopover requirements of migratory landbirds.

Connecticut, Delaware, Maine, Maryland, Massachuse

New software methods in radar ornithology using WSR-88D weather data and potential application to monitoring effects of climate change on bird migration

Radar ornithology has provided tools for studying the movement of birds, especially related to migration. Researchers have presented qualitative evidence suggesting that birds, or at least migration events, can be identified using large broad scale radars such as the WSR-88D used in the NEXRAD weather surveillance system. This is potentially a boon for ornithologists because such data cover a large portion of the United States, are constantly being produced, are freely available, and have been archived since the early 1990s. A major obstacle to this research, however, has been that identifying birds in NEXRAD data has required a trained technician to manually inspect a graphically rendered radar sweep. A single site completes one volume scan every five to ten minutes, producing over 52,000 volume scans in one year. This is an immense amount of data, and manual classification is infeasible. We have developed a system that identifies biological echoes using machine learning techniques. This approach begins with training data using scans that have been classified by experts, or uses bird data collected in the field. The data are preprocessed to ensure quality and to emphasize relevant features. A classifier is then trained using this data and cross validation is used to measure performance. We compared neural networks, naive Bayes, and k-nearest neighbor classifiers. Empirical evidence is provided showing that this system can achieve classification accuracies in the 80th to 90th percentile. We propose to apply these methods to studying bird migration phenology and how it is affected by climate variability and change over multiple temporal scales.

Conference Paper

Immunological markers for tolerance to avian malaria in Hawai`i `Amakihi: new tools for restoring native Hawaiian forest birds?

We evaluated three assays for non-specific or innate immune capacity to see if measurements were independent of malarial infection and capable of distinguishing malaria-tolerant, low-elevation Hawaiʽi ʽAmakihi from malaria-susceptible, high-elevation ʽAmakihi. ʽAmakihi were captured at Malama Ki Forest Reserve (20 m), Hakalau Forest National Wildlife Refuge (1800 m), and Upper Waiakea Forest Reserve (1700 m), bled for collection of plasma and packed erythrocytes for malarial diagnostics, and either transported to Kīlauea Field Station Aviary and held in captivity for 48 hours for inoculation of wing webs with phytohemagglutinin A (PHA) or released immediately in the field after collection of a blood sample. All birds were tested by polymerase chain reaction (PCR) and microscopy to determine infection status. We found no significant association between malarial infection status and degree of wing web swelling after inoculation with PHA (T = -0.174, df = 13, P = 0.864) and no association between origin of birds from low- and high-elevation populations and degree of wing web swelling (T = 0.113, df = 52, P = 0.911). Infected ʽAmakihi from low elevation had significantly higher small molecule plasma antioxidant capacity than uninfected individuals from the same population (T = -2.675, df = 21, P = 0.014), so we limited comparisons to uninfected birds. Uninfected ʽAmakihi from low elevations did not differ in small molecule plasma antioxidant capacity from uninfected ʽAmakihi from high elevation (T = -0.260, df = 46, P = 0.796). Compared to high-elevation birds, low-elevation ʽAmakihi had significantly higher titers of natural antibodies (NAb) as measured by complement-mediated lysis of rabbit erythrocytes (Mann-Whitney U = 27, X 2 = 32.332, df = 1, P < 0.0001). This innate immunological difference may be related to ability to survive malarial infection and may prove to be important for understanding possible mechanisms for the evolution of disease tolerance in Hawaiʽi’s native bird species.

Hawai'i